test_NCBIWWW
Running tests on _Scanner
************************************************** TESTING bt019
************************************************** TESTING bt020
************************************************** TESTING bt021
************************************************** TESTING bt022
************************************************** TESTING bt023
************************************************** TESTING bt024
************************************************** TESTING bt025
************************************************** TESTING bt026
************************************************** TESTING bt027
************************************************** TESTING bt028
************************************************** TESTING bt029
************************************************** TESTING bt030
************************************************** TESTING bt031
************************************************** TESTING bt032
************************************************** TESTING bt033
************************************************** TESTING bt034
************************************************** TESTING bt035
************************************************** TESTING bt036
************************************************** TESTING bt037
************************************************** TESTING bt038
************************************************** TESTING bt061
************************************************** TESTING bt064
************************************************** TESTING bt066
************************************************** TESTING bt069
************************************************** TESTING bt070
************************************************** TESTING bt019
noevent        : <HTML>
noevent        : <HEAD>
noevent        : <TITLE>BLAST Search Results </TITLE>
noevent        : </HEAD>
noevent        : <BODY BGCOLOR="#FFFFFF" LINK="#0000FF" VLINK="#660099" ALINK="#
noevent        : <A HREF="http://www.ncbi.nlm.nih.gov/BLAST/blast_form.map"> <IM
noevent        : <BR><BR><PRE>
*************** start_header
version        : <b>BLASTP 2.0.10 [Aug-26-1999]</b>
noevent        : 
noevent        : 
reference      : <b><a href="http://www.ncbi.nlm.nih.gov/htbin-
reference      : post/Entrez/query?uid=9254694&form=6&db=m&Dopt=r">Reference</a>
reference      : Altschul, Stephen F., Thomas L. Madden, Alejandro A. Sch&auml;f
reference      : Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1
reference      : "Gapped BLAST and PSI-BLAST: a new generation of protein databa
reference      : programs",  Nucleic Acids Res. 25:3389-3402.
noevent        : <p>
query_info     : <b>Query=</b> gi|120291|sp|P21297|FLBT_CAUCR FLBT PROTEIN.
query_info     :          (141 letters)
noevent        : 
database_info  : <b>Database:</b> Non-redundant SwissProt sequences
database_info  :            82,258 sequences; 29,652,561 total letters
noevent        : 
noevent        : <p> <p>If you have any problems or questions with the results o
noevent        : <FORM NAME="BLASTFORM">
noevent        : </PRE>
noevent        : <CENTER>
noevent        : <H3><a href="/BLAST/newoptions.html#graphical-overview"> Distri
noevent        : <input name=defline size=80 value="Mouse-over to show defline a
noevent        : </CENTER>
noevent        : <map name=img_map>
noevent        : <area shape=rect coords=69,101,476,106 href="#120291" ONMOUSEOV
noevent        : <area shape=rect coords=156,108,305,113 href="#3024946" ONMOUSE
noevent        : </map>
noevent        : <CENTER>
noevent        : <IMG WIDTH=529 HEIGHT=115 USEMAP=#img_map BORDER=1 SRC="nph-get
noevent        : <HR>
noevent        : <PRE>
noevent        : <PRE>
noevent        : 
*************** end_header
*************** start_descriptions
description_hea: 
description_hea: Sequences producing significant alignments:
noevent        : 
description    : <a href="http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=R
description    : <a href="http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=R
noevent        : 
*************** end_descriptions
*************** start_alignment
noevent        : <PRE>
title          : <a name = 120291> </a><a href="http://www.ncbi.nlm.nih.gov:80/e
length         :            Length = 141
noevent        : 
*************** start_hsp
score          :  Score =  256 bits (646), Expect = 2e-68
identities     :  Identities = 127/127 (100%), Positives = 127/127 (100%)
noevent        : 
query          : Query: 1   MPLKLSLKPGEKFVLNGAVVQNGDRRGVLVLQNKASVLREKDIMQPDQVTTP
align          :            MPLKLSLKPGEKFVLNGAVVQNGDRRGVLVLQNKASVLREKDIMQPDQVTTP
sbjct          : Sbjct: 1   MPLKLSLKPGEKFVLNGAVVQNGDRRGVLVLQNKASVLREKDIMQPDQVTTP
noevent        : 
query          : Query: 61  MMMYLDEVGAEKFYEEFATRLNEFMGVVRNPVVLQDCIAISKHVMAREYYKA
align          :            MMMYLDEVGAEKFYEEFATRLNEFMGVVRNPVVLQDCIAISKHVMAREYYKA
sbjct          : Sbjct: 61  MMMYLDEVGAEKFYEEFATRLNEFMGVVRNPVVLQDCIAISKHVMAREYYKA
noevent        : 
query          : Query: 121 EYEDERL 127
align          :            EYEDERL
sbjct          : Sbjct: 121 EYEDERL 127
noevent        : </PRE>
noevent        : 
noevent        : 
*************** end_hsp
*************** end_alignment
*************** start_alignment
noevent        : <PRE>
title          : <a name = 3024946> </a><a href="http://www.ncbi.nlm.nih.gov:80/
length         :            Length = 426
noevent        : 
*************** start_hsp
score          :  Score = 29.3 bits (64), Expect = 3.4
identities     :  Identities = 15/47 (31%), Positives = 23/47 (48%)
noevent        : 
query          : Query: 28  VLVLQNKASVLREKDIMQPDQVTTPARHIYFPVMMMYLDEVGAEKFY 74
align          :            +LVL N  ++   K     D  TT   +IY P+ +    +  A+KFY
sbjct          : Sbjct: 169 ILVLINNTNITELKKFEDDDYYTTFQHYIYQPIFIFTTYDSKAKKFY 215
noevent        : </PRE>
noevent        : 
noevent        : 
noevent        : 
*************** end_hsp
*************** end_alignment
*************** start_database_report
noevent        : <PRE>
database       :   Database: Non-redundant SwissProt sequences
posted_date    :     Posted date:  Dec 16, 1999  7:53 PM
num_letters_in_:   Number of letters in database: 29,652,561
num_sequences_i:   Number of sequences in database:  82,258
noevent        : 
noevent        : Lambda     K      H
ka_params      :    0.323    0.139    0.392
noevent        : 
gapped         : Gapped
noevent        : Lambda     K      H
ka_params_gap  :    0.270   0.0470    0.230
noevent        : 
noevent        : 
*************** end_database_report
*************** start_parameters
matrix         : Matrix: BLOSUM62
gap_penalties  : Gap Penalties: Existence: 11, Extension: 1
num_hits       : Number of Hits to DB: 6932673
num_sequences  : Number of Sequences: 82258
num_extends    : Number of extensions: 246623
num_good_extend: Number of successful extensions: 486
num_seqs_better: Number of sequences better than 10.0: 2
hsps_no_gap    : Number of HSP's better than 10.0 without gapping: 2
hsps_prelim_gap: Number of HSP's successfully gapped in prelim test: 0
hsps_prelim_gap: Number of HSP's that attempted gapping in prelim test: 484
hsps_gapped    : Number of HSP's gapped (non-prelim): 2
query_length   : length of query: 141
database_length: length of database: 29,652,561
effective_hsp_l: effective HSP length: 50
effective_query: effective length of query: 91
effective_datab: effective length of database: 25,539,661
effective_searc: effective search space: 2324109151
effective_searc: effective search space used: 2324109151
threshold      : T: 11
window_size    : A: 40
dropoff_1st_pas: X1: 16 ( 7.5 bits)
gap_x_dropoff  : X2: 38 (14.8 bits)
gap_x_dropoff_f: X3: 64 (24.9 bits)
gap_trigger    : S1: 41 (21.9 bits)
blast_cutoff   : S2: 61 (28.2 bits)
noevent        : 
noevent        : </PRE>
*************** end_parameters
noevent        : 
noevent        : </BODY>
noevent        : </HTML>
noevent        : </BODY>
noevent        : </HTML>
************************************************** TESTING bt023
noevent        : <HTML>
noevent        : <HEAD>
noevent        : <TITLE>BLAST Search Results </TITLE>
noevent        : </HEAD>
noevent        : <BODY BGCOLOR="#FFFFFF" LINK="#0000FF" VLINK="#660099" ALINK="#
noevent        : <A HREF="http://www.ncbi.nlm.nih.gov/BLAST/blast_form.map"> <IM
noevent        : <BR><BR><PRE>
*************** start_header
version        : <b>BLASTP 2.0.10 [Aug-26-1999]</b>
noevent        : 
noevent        : 
reference      : <b><a href="http://www.ncbi.nlm.nih.gov/htbin-
reference      : post/Entrez/query?uid=9254694&form=6&db=m&Dopt=r">Reference</a>
reference      : Altschul, Stephen F., Thomas L. Madden, Alejandro A. Sch&auml;f
reference      : Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1
reference      : "Gapped BLAST and PSI-BLAST: a new generation of protein databa
reference      : programs",  Nucleic Acids Res. 25:3389-3402.
noevent        : <p>
query_info     : <b>Query=</b> gi|132349|sp|P15394|REPA_AGRTU REPLICATING PROTEI
query_info     :          (250 letters)
noevent        : 
database_info  : <b>Database:</b> Non-redundant SwissProt sequences
database_info  :            82,258 sequences; 29,652,561 total letters
noevent        : 
noevent        : <p> <p>If you have any problems or questions with the results o
noevent        : <FORM NAME="BLASTFORM">
noevent        : </PRE>
noevent        : <CENTER>
noevent        : <H3><a href="/BLAST/newoptions.html#graphical-overview"> Distri
noevent        : <input name=defline size=80 value="Mouse-over to show defline a
noevent        : </CENTER>
noevent        : <map name=img_map>
noevent        : <area shape=rect coords=69,101,523,106 href="#132349" ONMOUSEOV
noevent        : <area shape=rect coords=362,108,521,113 href="#123932" ONMOUSEO
noevent        : <area shape=rect coords=346,115,515,120 href="#137670" ONMOUSEO
noevent        : <area shape=rect coords=271,122,517,127 href="#5921693" ONMOUSE
noevent        : <area shape=rect coords=287,129,466,134 href="#121952" ONMOUSEO
noevent        : <area shape=rect coords=245,136,466,141 href="#462182" ONMOUSEO
noevent        : <area shape=rect coords=275,143,466,148 href="#124141" ONMOUSEO
noevent        : <area shape=rect coords=362,150,504,155 href="#3915729" ONMOUSE
noevent        : <area shape=rect coords=165,108,225,113 href="#731294" ONMOUSEO
noevent        : <area shape=rect coords=247,157,413,162 href="#1708851" ONMOUSE
noevent        : <area shape=rect coords=315,164,503,169 href="#2495137" ONMOUSE
noevent        : <area shape=rect coords=275,171,457,176 href="#6226905" ONMOUSE
noevent        : <area shape=rect coords=282,178,422,183 href="#1172635" ONMOUSE
noevent        : <area shape=rect coords=337,185,499,190 href="#547963" ONMOUSEO
noevent        : <area shape=rect coords=439,157,492,162 href="#6093970" ONMOUSE
noevent        : </map>
noevent        : <CENTER>
noevent        : <IMG WIDTH=529 HEIGHT=192 USEMAP=#img_map BORDER=1 SRC="nph-get
noevent        : <HR>
noevent        : <PRE>
noevent        : <PRE>
noevent        : 
*************** end_header
*************** start_descriptions
description_hea: 
description_hea: Sequences producing significant alignments:
noevent        : 
description    : <a href="http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=R
description    : <a href="http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=R
description    : <a href="http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=R
description    : <a href="http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=R
description    : <a href="http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=R
description    : <a href="http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=R
description    : <a href="http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=R
description    : <a href="http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=R
description    : <a href="http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=R
description    : <a href="http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=R
description    : <a href="http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=R
description    : <a href="http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=R
description    : <a href="http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=R
description    : <a href="http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=R
description    : <a href="http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=R
noevent        : 
*************** end_descriptions
*************** start_alignment
noevent        : <PRE>
multalign      : blast_tmp 1    MFQQIGAVQAKSGTDEPAHPCEKFPPERKCEAVFWKPLPRHEAREILL
multalign      : <a name = 132349></a><a href=http://www.ncbi.nlm.nih.gov:80/ent
multalign      : <a name = 731294></a><a href=http://www.ncbi.nlm.nih.gov:80/ent
noevent        : 
multalign      : blast_tmp 61   GKRTGPLGHVALEVLDYLTNLVDFGNGRLDPSISTIMEKIGRAESCMS
multalign      : <a href=http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=Re
multalign      : <a name = 5921693></a><a href=http://www.ncbi.nlm.nih.gov:80/en
multalign      : <a name = 124141></a><a href=http://www.ncbi.nlm.nih.gov:80/ent
multalign      : <a name = 462182></a><a href=http://www.ncbi.nlm.nih.gov:80/ent
multalign      : <a name = 1708851></a><a href=http://www.ncbi.nlm.nih.gov:80/en
multalign      : <a href=http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=Re
multalign      : <a name = 6226905></a><a href=http://www.ncbi.nlm.nih.gov:80/en
multalign      : <a name = 1172635></a><a href=http://www.ncbi.nlm.nih.gov:80/en
noevent        : 
multalign      : blast_tmp 121  AGAADKQRLPLEPAGARPRALLGKYVRK------AA---PL---PDDA
multalign      : <a href=http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=Re
multalign      : <a name = 137670></a><a href=http://www.ncbi.nlm.nih.gov:80/ent
multalign      : <a href=http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=Re
multalign      : <a name = 121952></a><a href=http://www.ncbi.nlm.nih.gov:80/ent
multalign      : <a href=http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=Re
multalign      : <a href=http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=Re
multalign      : <a href=http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=Re
multalign      : <a name = 2495137></a><a href=http://www.ncbi.nlm.nih.gov:80/en
multalign      : <a href=http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=Re
multalign      : <a href=http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=Re
multalign      : <a name = 547963></a><a href=http://www.ncbi.nlm.nih.gov:80/ent
noevent        : 
multalign      : blast_tmp 161  Q----ERHDTIKAHMDS---LSPADRLR----ET--VEDRTRAEQLAG
multalign      : <a href=http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=Re
multalign      : <a name = 123932></a><a href=http://www.ncbi.nlm.nih.gov:80/ent
multalign      : <a href=http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=Re
multalign      : <a href=http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=Re
multalign      : <a href=http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=Re
multalign      : <a name = 3915729></a><a href=http://www.ncbi.nlm.nih.gov:80/en
multalign      : <a href=http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=Re
multalign      : <a href=http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=Re
multalign      : <a href=http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=Re
multalign      : <a href=http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=Re
multalign      : <a href=http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=Re
multalign      : <a name = 6093970></a><a href=http://www.ncbi.nlm.nih.gov:80/en
multalign      : <a href=http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=Re
multalign      : <a href=http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=Re
noevent        : 
multalign      : blast_tmp 205  --PSGPRKAARRRQQSRCSFTTPNRPRRTLPS------SHPQKFG---
multalign      : <a href=http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=Re
multalign      : <a href=http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=Re
multalign      : <a href=http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=Re
multalign      : <a href=http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=Re
multalign      : <a href=http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=Re
multalign      : <a href=http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=Re
multalign      : <a href=http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=Re
multalign      : <a href=http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=Re
multalign      : <a href=http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=Re
multalign      : <a href=http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=Re
multalign      : <a href=http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=Re
multalign      : <a href=http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=Re
noevent        : </PRE>
noevent        : 
*************** end_alignment
*************** start_database_report
noevent        : <PRE>
database       :   Database: Non-redundant SwissProt sequences
posted_date    :     Posted date:  Dec 18, 1999  8:26 PM
num_letters_in_:   Number of letters in database: 29,652,561
num_sequences_i:   Number of sequences in database:  82,258
noevent        : 
noevent        : Lambda     K      H
ka_params      :    0.317    0.133    0.395
noevent        : 
gapped         : Gapped
noevent        : Lambda     K      H
ka_params_gap  :    0.270   0.0470    0.230
noevent        : 
noevent        : 
*************** end_database_report
*************** start_parameters
matrix         : Matrix: BLOSUM62
gap_penalties  : Gap Penalties: Existence: 11, Extension: 1
num_hits       : Number of Hits to DB: 14679054
num_sequences  : Number of Sequences: 82258
num_extends    : Number of extensions: 599117
num_good_extend: Number of successful extensions: 1508
num_seqs_better: Number of sequences better than 10.0: 15
hsps_no_gap    : Number of HSP's better than 10.0 without gapping: 4
hsps_prelim_gap: Number of HSP's successfully gapped in prelim test: 11
hsps_prelim_gap: Number of HSP's that attempted gapping in prelim test: 1504
hsps_gapped    : Number of HSP's gapped (non-prelim): 15
query_length   : length of query: 250
database_length: length of database: 29,652,561
effective_hsp_l: effective HSP length: 51
effective_query: effective length of query: 199
effective_datab: effective length of database: 25,457,403
effective_searc: effective search space: 5066023197
effective_searc: effective search space used: 5066023197
threshold      : T: 11
window_size    : A: 40
dropoff_1st_pas: X1: 16 ( 7.3 bits)
gap_x_dropoff  : X2: 38 (14.8 bits)
gap_x_dropoff_f: X3: 64 (24.9 bits)
gap_trigger    : S1: 41 (21.7 bits)
blast_cutoff   : S2: 63 (29.0 bits)
noevent        : 
noevent        : </PRE>
*************** end_parameters
noevent        : 
noevent        : </BODY>
noevent        : </HTML>
noevent        : </BODY>
noevent        : </HTML>
************************************************** TESTING bt026
noevent        : <HTML>
noevent        : <HEAD>
noevent        : <TITLE>BLAST Search Results </TITLE>
noevent        : </HEAD>
noevent        : <BODY BGCOLOR="#FFFFFF" LINK="#0000FF" VLINK="#660099" ALINK="#
noevent        : <A HREF="http://www.ncbi.nlm.nih.gov/BLAST/blast_form.map"> <IM
noevent        : <BR><BR><PRE>
*************** start_header
version        : <b>BLASTN 2.0.10 [Aug-26-1999]</b>
noevent        : 
noevent        : 
reference      : <b><a href="http://www.ncbi.nlm.nih.gov/htbin-
reference      : post/Entrez/query?uid=9254694&form=6&db=m&Dopt=r">Reference</a>
reference      : Altschul, Stephen F., Thomas L. Madden, Alejandro A. Sch&auml;f
reference      : Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1
reference      : "Gapped BLAST and PSI-BLAST: a new generation of protein databa
reference      : programs",  Nucleic Acids Res. 25:3389-3402.
noevent        : <p>
query_info     : <b>Query=</b> gi|1347201|gb|G24969.1|G24969 human STS EST21946.
query_info     :          (331 letters)
noevent        : 
database_info  : <b>Database:</b> Non-redundant Database of GenBank STS Division
database_info  :            89,405 sequences; 32,867,852 total letters
noevent        : 
noevent        : <p> <p>If you have any problems or questions with the results o
noevent        : <FORM NAME="BLASTFORM">
noevent        : </PRE>
noevent        : <CENTER>
noevent        : <H3><a href="/BLAST/newoptions.html#graphical-overview"> Distri
noevent        : <input name=defline size=80 value="Mouse-over to show defline a
noevent        : </CENTER>
noevent        : <map name=img_map>
noevent        : <area shape=rect coords=69,101,523,106 href="#1347201" ONMOUSEO
noevent        : <area shape=rect coords=237,108,259,113 href="#2665277" ONMOUSE
noevent        : <area shape=rect coords=132,108,153,113 href="#1342139" ONMOUSE
noevent        : <area shape=rect coords=133,115,154,120 href="#4493602" ONMOUSE
noevent        : <area shape=rect coords=201,108,221,113 href="#1235411" ONMOUSE
noevent        : <area shape=rect coords=204,115,224,120 href="#6120731" ONMOUSE
noevent        : <area shape=rect coords=205,122,226,127 href="#939357" ONMOUSEO
noevent        : <area shape=rect coords=221,129,253,134 href="#4757440" ONMOUSE
noevent        : <area shape=rect coords=461,108,482,113 href="#719782" ONMOUSEO
noevent        : </map>
noevent        : <CENTER>
noevent        : <IMG WIDTH=529 HEIGHT=136 USEMAP=#img_map BORDER=1 SRC="nph-get
noevent        : <HR>
noevent        : <PRE>
noevent        : 
noevent        : 
*************** end_header
*************** start_descriptions
*************** end_descriptions
*************** start_alignment
noevent        : <PRE>
title          : <a name = 1347201> </a><a href="http://www.ncbi.nlm.nih.gov:80/
title          :            SHGC-31731.
length         :            Length = 331
noevent        : 
*************** start_hsp
score          :  Score =  656 bits (331), Expect = 0.0
identities     :  Identities = 331/331 (100%)
strand         :  Strand = Plus / Plus
noevent        : 
noevent        : 
query          : Query: 1   cctccaccctctcatgagcaacaggatatgtgaaagtacttgcagccagaag
align          :            ||||||||||||||||||||||||||||||||||||||||||||||||||||
sbjct          : Sbjct: 1   cctccaccctctcatgagcaacaggatatgtgaaagtacttgcagccagaag
noevent        : 
noevent        : 
query          : Query: 61  caatcctcgggtgctagatggagctccccaaggagcagagaggaaaaggcag
align          :            ||||||||||||||||||||||||||||||||||||||||||||||||||||
sbjct          : Sbjct: 61  caatcctcgggtgctagatggagctccccaaggagcagagaggaaaaggcag
noevent        : 
noevent        : 
query          : Query: 121 ggccaggcagcagggatggagactaagtttggcccaaggctgcccgcaagca
align          :            ||||||||||||||||||||||||||||||||||||||||||||||||||||
sbjct          : Sbjct: 121 ggccaggcagcagggatggagactaagtttggcccaaggctgcccgcaagca
noevent        : 
noevent        : 
query          : Query: 181 atcatgccctctggtaggtgtctatttctgtctgaaccagaaatacaccaag
align          :            ||||||||||||||||||||||||||||||||||||||||||||||||||||
sbjct          : Sbjct: 181 atcatgccctctggtaggtgtctatttctgtctgaaccagaaatacaccaag
noevent        : 
noevent        : 
query          : Query: 241 atgggggctttgctggcttcgacatcactggttcaactatgtcactgctttg
align          :            ||||||||||||||||||||||||||||||||||||||||||||||||||||
sbjct          : Sbjct: 241 atgggggctttgctggcttcgacatcactggttcaactatgtcactgctttg
noevent        : 
noevent        : 
query          : Query: 301 agtgctccagaacctcaggttccttcagatt 331
align          :            |||||||||||||||||||||||||||||||
sbjct          : Sbjct: 301 agtgctccagaacctcaggttccttcagatt 331
noevent        : </PRE>
noevent        : 
noevent        : 
*************** end_hsp
*************** end_alignment
*************** start_alignment
noevent        : <PRE>
title          : <a name = 2665277> </a><a href="http://www.ncbi.nlm.nih.gov:80/
title          :            sequence tagged site [Homo sapiens]
length         :            Length = 554
noevent        : 
*************** start_hsp
score          :  Score = 34.2 bits (17), Expect = 0.50
identities     :  Identities = 17/17 (100%)
strand         :  Strand = Plus / Minus
noevent        : 
noevent        : 
query          : Query: 123 ccaggcagcagggatgg 139
align          :            |||||||||||||||||
sbjct          : Sbjct: 434 ccaggcagcagggatgg 418
noevent        : </PRE>
noevent        : 
noevent        : 
*************** end_hsp
*************** end_alignment
*************** start_alignment
noevent        : <PRE>
title          : <a name = 4757440> </a><a href="http://www.ncbi.nlm.nih.gov:80/
title          :            genomic clone 343C1, sequence tagged site
length         :            Length = 360
noevent        : 
*************** start_hsp
score          :  Score = 32.2 bits (16), Expect = 2.0
identities     :  Identities = 22/24 (91%)
strand         :  Strand = Plus / Minus
noevent        : 
noevent        : 
query          : Query: 112 ggaggagagggccaggcagcaggg 135
align          :            ||||||||||| | ||||||||||
sbjct          : Sbjct: 287 ggaggagaggggctggcagcaggg 264
noevent        : </PRE>
noevent        : 
noevent        : 
*************** end_hsp
*************** end_alignment
*************** start_alignment
noevent        : <PRE>
title          : <a name = 4493602> </a><a href="http://www.ncbi.nlm.nih.gov:80/
title          :            sequence tagged site
length         :            Length = 454
noevent        : 
*************** start_hsp
score          :  Score = 32.2 bits (16), Expect = 2.0
identities     :  Identities = 16/16 (100%)
strand         :  Strand = Plus / Plus
noevent        : 
noevent        : 
query          : Query: 48  agaagcaaaaccacaa 63
align          :            ||||||||||||||||
sbjct          : Sbjct: 434 agaagcaaaaccacaa 449
noevent        : </PRE>
noevent        : 
noevent        : 
*************** end_hsp
*************** end_alignment
*************** start_alignment
noevent        : <PRE>
title          : <a name = 6120731> </a><a href="http://www.ncbi.nlm.nih.gov:80/
length         :            Length = 652
noevent        : 
*************** start_hsp
score          :  Score = 32.2 bits (16), Expect = 2.0
identities     :  Identities = 16/16 (100%)
strand         :  Strand = Plus / Minus
noevent        : 
noevent        : 
query          : Query: 99  agaggaaaaggcagga 114
align          :            ||||||||||||||||
sbjct          : Sbjct: 431 agaggaaaaggcagga 416
noevent        : </PRE>
noevent        : 
noevent        : 
*************** end_hsp
*************** end_alignment
*************** start_alignment
noevent        : <PRE>
title          : <a name = 1235411> </a><a href="http://www.ncbi.nlm.nih.gov:80/
title          :            AFMc009wh1; single read, sequence tagged site [Homo
title          :            sapiens]
length         :            Length = 382
noevent        : 
*************** start_hsp
score          :  Score = 32.2 bits (16), Expect = 2.0
identities     :  Identities = 16/16 (100%)
strand         :  Strand = Plus / Plus
noevent        : 
noevent        : 
query          : Query: 97  agagaggaaaaggcag 112
align          :            ||||||||||||||||
sbjct          : Sbjct: 107 agagaggaaaaggcag 122
noevent        : </PRE>
noevent        : 
noevent        : 
*************** end_hsp
*************** end_alignment
*************** start_alignment
noevent        : <PRE>
title          : <a name = 939357> </a><a href="http://www.ncbi.nlm.nih.gov:80/e
length         :            Length = 643
noevent        : 
*************** start_hsp
score          :  Score = 32.2 bits (16), Expect = 2.0
identities     :  Identities = 16/16 (100%)
strand         :  Strand = Plus / Minus
noevent        : 
noevent        : 
query          : Query: 100 gaggaaaaggcaggag 115
align          :            ||||||||||||||||
sbjct          : Sbjct: 482 gaggaaaaggcaggag 467
noevent        : </PRE>
noevent        : 
noevent        : 
*************** end_hsp
*************** end_alignment
*************** start_alignment
noevent        : <PRE>
title          : <a name = 1342139> </a><a href="http://www.ncbi.nlm.nih.gov:80/
length         :            Length = 418
noevent        : 
*************** start_hsp
score          :  Score = 32.2 bits (16), Expect = 2.0
identities     :  Identities = 16/16 (100%)
strand         :  Strand = Plus / Minus
noevent        : 
noevent        : 
query          : Query: 47  cagaagcaaaaccaca 62
align          :            ||||||||||||||||
sbjct          : Sbjct: 193 cagaagcaaaaccaca 178
noevent        : </PRE>
noevent        : 
noevent        : 
*************** end_hsp
*************** end_alignment
*************** start_alignment
noevent        : <PRE>
title          : <a name = 719782> </a><a href="http://www.ncbi.nlm.nih.gov:80/e
length         :            Length = 349
noevent        : 
*************** start_hsp
score          :  Score = 32.2 bits (16), Expect = 2.0
identities     :  Identities = 16/16 (100%)
strand         :  Strand = Plus / Plus
noevent        : 
noevent        : 
query          : Query: 286 tgctttgttatattta 301
align          :            ||||||||||||||||
sbjct          : Sbjct: 111 tgctttgttatattta 126
noevent        : </PRE>
noevent        : 
noevent        : 
noevent        : 
*************** end_hsp
*************** end_alignment
*************** start_database_report
noevent        : <PRE>
database       :   Database: Non-redundant Database of GenBank STS Division
posted_date    :     Posted date:  Dec 18, 1999  7:45 PM
num_letters_in_:   Number of letters in database: 32,867,852
num_sequences_i:   Number of sequences in database:  89,405
noevent        : 
noevent        : Lambda     K      H
ka_params      :     1.37    0.711     1.31
noevent        : 
gapped         : Gapped
noevent        : Lambda     K      H
ka_params_gap  :     1.37    0.711     1.31
noevent        : 
noevent        : 
*************** end_database_report
*************** start_parameters
matrix         : Matrix: blastn matrix:1 -3
gap_penalties  : Gap Penalties: Existence: 5, Extension: 2
num_hits       : Number of Hits to DB: 7042
num_sequences  : Number of Sequences: 89405
num_extends    : Number of extensions: 7042
num_good_extend: Number of successful extensions: 1951
num_seqs_better: Number of sequences better than 10.0: 13
query_length   : length of query: 331
database_length: length of database: 32,867,852
effective_hsp_l: effective HSP length: 17
effective_query: effective length of query: 314
effective_datab: effective length of database: 31,347,967
effective_searc: effective search space: 9843261638
effective_searc: effective search space used: 9843261638
threshold      : T: 0
window_size    : A: 0
dropoff_1st_pas: X1: 6 (11.9 bits)
gap_x_dropoff  : X2: 10 (19.8 bits)
gap_trigger    : S1: 12 (24.3 bits)
blast_cutoff   : S2: 15 (30.2 bits)
noevent        : 
noevent        : </PRE>
*************** end_parameters
noevent        : 
noevent        : </BODY>
noevent        : </HTML>
noevent        : </BODY>
noevent        : </HTML>
************************************************** TESTING bt028
noevent        : <HTML>
noevent        : <HEAD>
noevent        : <TITLE>BLAST Search Results </TITLE>
noevent        : </HEAD>
noevent        : <BODY BGCOLOR="#FFFFFF" LINK="#0000FF" VLINK="#660099" ALINK="#
noevent        : <A HREF="http://www.ncbi.nlm.nih.gov/BLAST/blast_form.map"> <IM
noevent        : <BR><BR><PRE>
*************** start_header
version        : <b>BLASTX 2.0.10 [Aug-26-1999]</b>
noevent        : 
noevent        : 
reference      : <b><a href="http://www.ncbi.nlm.nih.gov/htbin-
reference      : post/Entrez/query?uid=9254694&form=6&db=m&Dopt=r">Reference</a>
reference      : Altschul, Stephen F., Thomas L. Madden, Alejandro A. Sch&auml;f
reference      : Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1
reference      : "Gapped BLAST and PSI-BLAST: a new generation of protein databa
reference      : programs",  Nucleic Acids Res. 25:3389-3402.
noevent        : <p>
query_info     : <b>Query=</b> gi|1347369|gb|G25137.1|G25137 human STS EST48004.
query_info     :          (556 letters)
noevent        : 
database_info  : <b>Database:</b> Non-redundant SwissProt sequences
database_info  :            82,258 sequences; 29,652,561 total letters
noevent        : 
noevent        : <p> <p>If you have any problems or questions with the results o
noevent        : <FORM NAME="BLASTFORM">
noevent        : </PRE>
noevent        : <CENTER>
noevent        : <H3><a href="/BLAST/newoptions.html#graphical-overview"> Distri
noevent        : <input name=defline size=80 value="Mouse-over to show defline a
noevent        : </CENTER>
noevent        : <map name=img_map>
noevent        : <area shape=rect coords=69,101,183,106 href="#1731448" ONMOUSEO
noevent        : <area shape=rect coords=96,108,395,113 href="#465911" ONMOUSEOV
noevent        : <area shape=rect coords=69,115,395,120 href="#2494160" ONMOUSEO
noevent        : <area shape=rect coords=110,122,353,127 href="#1730688" ONMOUSE
noevent        : </map>
noevent        : <CENTER>
noevent        : <IMG WIDTH=529 HEIGHT=129 USEMAP=#img_map BORDER=1 SRC="nph-get
noevent        : <HR>
noevent        : <PRE>
noevent        : <PRE>
noevent        : 
*************** end_header
*************** start_descriptions
description_hea: 
description_hea: Sequences producing significant alignments:
noevent        : 
description    : <a href="http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=R
description    : <a href="http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=R
description    : <a href="http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=R
description    : <a href="http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=R
noevent        : 
*************** end_descriptions
*************** start_alignment
noevent        : <PRE>
title          : <a name = 1731448> </a><a href="http://www.ncbi.nlm.nih.gov:80/
length         :            Length = 514
noevent        : 
*************** start_hsp
score          :  Score = 86.6 bits (211), Expect = 3e-17
identities     :  Identities = 41/47 (87%), Positives = 44/47 (93%)
frame          :  Frame = +1
noevent        : 
query          : Query: 1   DLQLLIKAVNLFPAGTNSRWEVIANYMNIHSSSGVKRTAKDVIGKAK 141
align          :            DLQLLIKAVNLFPAG NSRW+VIANYMNIHSSSGVKRTAKDVI + +
sbjct          : Sbjct: 458 DLQLLIKAVNLFPAGRNSRWDVIANYMNIHSSSGVKRTAKDVISEVR 504
noevent        : </PRE>
noevent        : 
noevent        : 
*************** end_hsp
*************** end_alignment
*************** start_alignment
noevent        : <PRE>
title          : <a name = 465911> </a><a href="http://www.ncbi.nlm.nih.gov:80/e
length         :            Length = 275
noevent        : 
*************** start_hsp
score          :  Score = 41.8 bits (96), Expect = 0.001
identities     :  Identities = 30/122 (24%), Positives = 54/122 (43%)
frame          :  Frame = +1
noevent        : 
query          : Query: 34  FPAGTNSRWEVIANYMNIHSSSGVKRTAKDVIGKAKSLQKLDPHQKDDINKK
align          :            +PAGT +RWE +   +N        R+A+DVI  A  ++++   +++D  K
sbjct          : Sbjct: 159 YPAGTPNRWEQMGRVLN--------RSAEDVIAMAGKMKQM---KQEDYTKL
noevent        : 
query          : Query: 214 HGVVPQADNATPSERFXGPYTDFTPXTTEXQKLXEQALNTYPVNTXERWXXI
align          :              V  ++++                 +   QK  E AL  YP  T ERW  I
sbjct          : Sbjct: 208 VPVEEKSED---------------DWSQAEQKAFETALQKYPKGTDERWERI
noevent        : 
query          : Query: 394 KE 399
align          :            K+
sbjct          : Sbjct: 253 KK 254
noevent        : </PRE>
noevent        : 
noevent        : 
*************** end_hsp
*************** end_alignment
*************** start_alignment
noevent        : <PRE>
title          : <a name = 2494160> </a><a href="http://www.ncbi.nlm.nih.gov:80/
length         :            Length = 552
noevent        : 
*************** start_hsp
score          :  Score = 36.7 bits (83), Expect = 0.033
identities     :  Identities = 17/36 (47%), Positives = 19/36 (52%)
frame          :  Frame = +1
noevent        : 
query          : Query: 292 TTEXQKLXEQALNTYPVNTXERWXXIAVAVPGRXKE 399
align          :            T   QKL E AL  YP    +RW  IA  VP + KE
sbjct          : Sbjct: 496 TQSQQKLLELALQQYPKGASDRWDKIAKCVPSKSKE 531
noevent        : </PRE>
noevent        : 
noevent        : 
*************** end_hsp
*************** start_hsp
noevent        : <PRE>
score          :  Score = 31.3 bits (69), Expect = 1.5
identities     :  Identities = 18/50 (36%), Positives = 26/50 (52%)
frame          :  Frame = +1
noevent        : 
query          : Query: 1   DLQLLIKAVNLFPAGTNSRWEVIANYMNIHSSSGVKRTAKDVIGKAKSLQ 1
align          :            DL  L +++  FP GT  RW+ IA+ +         R+  DV  KAK L+
sbjct          : Sbjct: 332 DLSQLTRSMVKFPGGTPGRWDKIAHELG--------RSVTDVTTKAKELK 3
noevent        : </PRE>
noevent        : 
noevent        : 
*************** end_hsp
*************** end_alignment
*************** start_alignment
noevent        : <PRE>
title          : <a name = 1730688> </a><a href="http://www.ncbi.nlm.nih.gov:80/
length         :            Length = 580
noevent        : 
*************** start_hsp
score          :  Score = 29.0 bits (63), Expect = 7.4
identities     :  Identities = 27/99 (27%), Positives = 41/99 (41%)
frame          :  Frame = +1
noevent        : 
query          : Query: 52  SRWEVIANYMNIHSSSGVKRTAKDVIGKAKSLQKLDPHQKDDINKKAFDKFK
align          :            +RW+   +Y        V R+ KDV   ++SL  LD +QK     +A
sbjct          : Sbjct: 75  NRWKSFISY--------VTRSRKDVKTVSRSLSNLDLYQKCSKEIRADQDIS
noevent        : 
query          : Query: 232 ADNATPSERFXGPYTDFTPXTTEXQKLXEQALNTYPVNT 348
align          :                   E    PY +FT   +      EQ+ N +PV+T
sbjct          : Sbjct: 124 -------ETKLFPYINFTALNS------EQSHNFWPVHT 149
noevent        : </PRE>
noevent        : 
noevent        : 
noevent        : 
*************** end_hsp
*************** end_alignment
*************** start_database_report
noevent        : <PRE>
database       :   Database: Non-redundant SwissProt sequences
posted_date    :     Posted date:  Dec 28, 1999  4:33 PM
num_letters_in_:   Number of letters in database: 29,652,561
num_sequences_i:   Number of sequences in database:  82,258
noevent        : 
noevent        : Lambda     K      H
ka_params      :    0.318    0.135    0.401
noevent        : 
gapped         : Gapped
noevent        : Lambda     K      H
ka_params_gap  :    0.270   0.0470    0.230
noevent        : 
noevent        : 
*************** end_database_report
*************** start_parameters
matrix         : Matrix: BLOSUM62
gap_penalties  : Gap Penalties: Existence: 11, Extension: 1
num_hits       : Number of Hits to DB: 23174157
num_sequences  : Number of Sequences: 82258
num_extends    : Number of extensions: 387821
num_good_extend: Number of successful extensions: 980
num_seqs_better: Number of sequences better than 10.0: 8
hsps_no_gap    : Number of HSP's better than 10.0 without gapping: 3
hsps_prelim_gap: Number of HSP's successfully gapped in prelim test: 1
hsps_prelim_gap: Number of HSP's that attempted gapping in prelim test: 973
hsps_gapped    : Number of HSP's gapped (non-prelim): 7
query_length   : length of query: 185
database_length: length of database: 29,652,561
effective_hsp_l: effective HSP length: 49
effective_query: effective length of query: 135
effective_datab: effective length of database: 25,621,919
effective_searc: effective search space: 3458959065
effective_searc: effective search space used: 3458959065
frameshift     : frameshift window, decay const: 50,  0.1
threshold      : T: 12
window_size    : A: 40
dropoff_1st_pas: X1: 16 ( 7.3 bits)
gap_x_dropoff  : X2: 38 (14.8 bits)
gap_x_dropoff_f: X3: 64 (24.9 bits)
gap_trigger    : S1: 41 (21.7 bits)
blast_cutoff   : S2: 62 (28.6 bits)
noevent        : 
noevent        : </PRE>
*************** end_parameters
noevent        : 
noevent        : </BODY>
noevent        : </HTML>
noevent        : </BODY>
noevent        : </HTML>
************************************************** TESTING bt030
noevent        : <HTML>
noevent        : <HEAD>
noevent        : <TITLE>BLAST Search Results </TITLE>
noevent        : </HEAD>
noevent        : <BODY BGCOLOR="#FFFFFF" LINK="#0000FF" VLINK="#660099" ALINK="#
noevent        : <A HREF="http://www.ncbi.nlm.nih.gov/BLAST/blast_form.map"> <IM
noevent        : <BR><BR><PRE>
*************** start_header
version        : <b>TBLASTN 2.0.10 [Aug-26-1999]</b>
noevent        : 
noevent        : 
reference      : <b><a href="http://www.ncbi.nlm.nih.gov/htbin-
reference      : post/Entrez/query?uid=9254694&form=6&db=m&Dopt=r">Reference</a>
reference      : Altschul, Stephen F., Thomas L. Madden, Alejandro A. Sch&auml;f
reference      : Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1
reference      : "Gapped BLAST and PSI-BLAST: a new generation of protein databa
reference      : programs",  Nucleic Acids Res. 25:3389-3402.
noevent        : <p>
query_info     : <b>Query=</b> gi|729325|sp|P39483|DHG2_BACME GLUCOSE 1-DEHYDROG
query_info     : II (GLCDH-II).
query_info     :          (261 letters)
noevent        : 
database_info  : <b>Database:</b> Non-redundant Database of GenBank STS Division
database_info  :            89,405 sequences; 32,867,852 total letters
noevent        : 
noevent        : <p> <p>If you have any problems or questions with the results o
noevent        : <FORM NAME="BLASTFORM">
noevent        : </PRE>
noevent        : <CENTER>
noevent        : <H3><a href="/BLAST/newoptions.html#graphical-overview"> Distri
noevent        : <input name=defline size=80 value="Mouse-over to show defline a
noevent        : </CENTER>
noevent        : <map name=img_map>
noevent        : <area shape=rect coords=255,101,379,106 href="#3820341" ONMOUSE
noevent        : <area shape=rect coords=376,108,502,113 href="#1375419" ONMOUSE
noevent        : <area shape=rect coords=416,101,500,106 href="#3819804" ONMOUSE
noevent        : <area shape=rect coords=441,115,504,120 href="#1375215" ONMOUSE
noevent        : <area shape=rect coords=79,101,137,106 href="#177714" ONMOUSEOV
noevent        : <area shape=rect coords=315,115,409,120 href="#5714409" ONMOUSE
noevent        : <area shape=rect coords=238,108,304,113 href="#1341648" ONMOUSE
noevent        : </map>
noevent        : <CENTER>
noevent        : <IMG WIDTH=529 HEIGHT=122 USEMAP=#img_map BORDER=1 SRC="nph-get
noevent        : <HR>
noevent        : <PRE>
noevent        : <PRE>
noevent        : 
*************** end_header
*************** start_descriptions
description_hea: 
description_hea: Sequences producing significant alignments:
noevent        : 
description    : <a href="http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=R
description    : <a href="http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=R
description    : <a href="http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=R
description    : <a href="http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=R
description    : <a href="http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=R
description    : <a href="http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=R
description    : <a href="http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=R
noevent        : 
*************** end_descriptions
*************** start_alignment
noevent        : <PRE>
title          : <a name = 3820341> </a><a href="http://www.ncbi.nlm.nih.gov:80/
title          :            okam5d07r [Kluyveromyces lactis]
length         :            Length = 230
noevent        : 
*************** start_hsp
score          :  Score = 46.9 bits (109), Expect = 1e-05
identities     :  Identities = 25/72 (34%), Positives = 44/72 (60%), Gaps = 3/72
frame          :  Frame = +1
noevent        : 
query          : Query: 108 NWNQVIDTNLTGAFLGSREAIKYFVEN---DIKGNVINMSSVHEMIPWPLFV
align          :            +W QVIDTN+ G F   + A+     +   D +  V+N+S+V+ ++  P
sbjct          : Sbjct: 1   SWRQVIDTNINGTFYTLKYALPLMESSSSPDSEAAVVNLSAVNGLVGIPGIS
noevent        : 
query          : Query: 165 MKLMTETLALEYAPK 179
align          :            +  +T+++ALEYA +
sbjct          : Sbjct: 181 VIGITQSVALEYAER 225
noevent        : </PRE>
noevent        : 
noevent        : 
*************** end_hsp
*************** end_alignment
*************** start_alignment
noevent        : <PRE>
title          : <a name = 1375419> </a><a href="http://www.ncbi.nlm.nih.gov:80/
length         :            Length = 594
noevent        : 
*************** start_hsp
score          :  Score = 43.4 bits (100), Expect = 1e-04
identities     :  Identities = 21/73 (28%), Positives = 34/73 (45%)
frame          :  Frame = -1
noevent        : 
query          : Query: 177 APKGIRVNNIGPGAIDTPINAEKFADPEQRADVESMIPMGYIGKPEEIASVA
align          :            AP   RVN + P  + T +    + DP +   + +  P+G   + E +
sbjct          : Sbjct: 312 APXRXRVNAVXPXVVMTSMGQATWXDPXKAXTMLNRXPLGXFAEVEHVVKAI
noevent        : 
query          : Query: 237 SYVTGITLFADGG 249
align          :               TG TL  +GG
sbjct          : Sbjct: 132 GMTTGSTLPVEGG 94
noevent        : </PRE>
noevent        : 
noevent        : 
*************** end_hsp
*************** end_alignment
*************** start_alignment
noevent        : <PRE>
title          : <a name = 3819804> </a><a href="http://www.ncbi.nlm.nih.gov:80/
title          :            okam6d01d [Kluyveromyces lactis]
length         :            Length = 199
noevent        : 
*************** start_hsp
score          :  Score = 39.5 bits (90), Expect = 0.002
identities     :  Identities = 18/49 (36%), Positives = 26/49 (52%)
frame          :  Frame = -1
noevent        : 
query          : Query: 200 FADPEQRADVESMIPMGYIGKPEEIASVAAFLASSQASYVTGITLFADG 24
align          :            F D + +    S+IPMG  G P+E+     + AS  ++Y TG  L  DG
sbjct          : Sbjct: 157 FVDEDLKNKWHSLIPMGREGLPQELVGAYLYFASDASTYTTGSDLLVDG 11
noevent        : </PRE>
noevent        : 
noevent        : 
*************** end_hsp
*************** end_alignment
*************** start_alignment
noevent        : <PRE>
title          : <a name = 1375215> </a><a href="http://www.ncbi.nlm.nih.gov:80/
length         :            Length = 268
noevent        : 
*************** start_hsp
score          :  Score = 30.9 bits (68), Expect = 0.76
identities     :  Identities = 12/37 (32%), Positives = 19/37 (50%)
frame          :  Frame = -1
noevent        : 
query          : Query: 214 PMGYIGKPEEIASVAAFLASSQASYVTGITLFADGGM 250
align          :            PMG  G PE++  V A      +  +TG ++   GG+
sbjct          : Sbjct: 268 PMGXXGDPEDVXDVXAXXXXEXSGXITGTSVEVTGGL 158
noevent        : </PRE>
noevent        : 
noevent        : 
*************** end_hsp
*************** end_alignment
*************** start_alignment
noevent        : <PRE>
title          : <a name = 5714409> </a><a href="http://www.ncbi.nlm.nih.gov:80/
title          :            strain C57BL/6J, sequence tagged site
length         :            Length = 299
noevent        : 
*************** start_hsp
score          :  Score = 29.3 bits (64), Expect = 2.2
identities     :  Identities = 17/55 (30%), Positives = 32/55 (57%), Gaps = 2/55
frame          :  Frame = -2
noevent        : 
query          : Query: 142 NMSSVHEMIPWPLFVHYAASKGGMKLMTETL--ALEYAPKGIRVNNIGPGAI
align          :            ++S    +I +P F+    S  G  L+  +L  A+ + P GI V+++GP ++
sbjct          : Sbjct: 172 SLSPTQYLIMFPSFLPCPLSHPGPFLLPSSLVIAVFFLPNGIEVSSLGPFSL
noevent        : </PRE>
noevent        : 
noevent        : 
*************** end_hsp
*************** end_alignment
*************** start_alignment
noevent        : <PRE>
title          : <a name = 177714> </a><a href="http://www.ncbi.nlm.nih.gov:80/e
length         :            Length = 412
noevent        : 
*************** start_hsp
score          :  Score = 29.3 bits (64), Expect = 2.2
identities     :  Identities = 14/34 (41%), Positives = 22/34 (64%)
frame          :  Frame = -1
noevent        : 
query          : Query: 7   DKVVVVTGGSKGLGRAMAVRFGQEQSKVVVNYRS 40
align          :            DKV  V GGS+G+GRA+A    ++  ++ V  R+
sbjct          : Sbjct: 316 DKVCAVFGGSRGIGRAVAQLMARKGYRLAVIARN 215
noevent        : </PRE>
noevent        : 
noevent        : 
*************** end_hsp
*************** end_alignment
*************** start_alignment
noevent        : <PRE>
title          : <a name = 1341648> </a><a href="http://www.ncbi.nlm.nih.gov:80/
length         :            Length = 586
noevent        : 
*************** start_hsp
score          :  Score = 28.6 bits (62), Expect = 3.8
identities     :  Identities = 16/39 (41%), Positives = 20/39 (51%), Gaps = 1/39
frame          :  Frame = +1
noevent        : 
query          : Query: 98  PVPSHELSLENWNQ-VIDTNLTGAFLGSREAIKYFVENDI 136
align          :            PVP  ELS  +W+Q  + T+ T  F  S     YF  N I
sbjct          : Sbjct: 220 PVPMQELSKVHWSQFFLTTSPTMTFFFSHYLANYFFRNSI 339
noevent        : </PRE>
noevent        : 
noevent        : 
noevent        : 
*************** end_hsp
*************** end_alignment
*************** start_database_report
noevent        : <PRE>
database       :   Database: Non-redundant Database of GenBank STS Division
posted_date    :     Posted date:  Dec 18, 1999  7:45 PM
num_letters_in_:   Number of letters in database: 32,867,852
num_sequences_i:   Number of sequences in database:  89,405
noevent        : 
noevent        : Lambda     K      H
ka_params      :    0.315    0.134    0.378
noevent        : 
gapped         : Gapped
noevent        : Lambda     K      H
ka_params_gap  :    0.270   0.0470    0.230
noevent        : 
noevent        : 
*************** end_database_report
*************** start_parameters
matrix         : Matrix: BLOSUM62
gap_penalties  : Gap Penalties: Existence: 11, Extension: 1
num_hits       : Number of Hits to DB: 6334151
num_sequences  : Number of Sequences: 89405
num_extends    : Number of extensions: 57201
num_good_extend: Number of successful extensions: 152
num_seqs_better: Number of sequences better than 10.0: 14
hsps_no_gap    : Number of HSP's better than 10.0 without gapping: 5
hsps_prelim_gap: Number of HSP's successfully gapped in prelim test: 2
hsps_prelim_gap: Number of HSP's that attempted gapping in prelim test: 146
hsps_gapped    : Number of HSP's gapped (non-prelim): 7
query_length   : length of query: 261
database_length: length of database: 10,955,950
effective_hsp_l: effective HSP length: 50
effective_query: effective length of query: 211
effective_datab: effective length of database: 6,485,700
effective_searc: effective search space: 1368482700
effective_searc: effective search space used: 1368482700
frameshift     : frameshift window, decay const: 50,  0.1
threshold      : T: 13
window_size    : A: 40
dropoff_1st_pas: X1: 16 ( 7.3 bits)
gap_x_dropoff  : X2: 38 (14.8 bits)
gap_x_dropoff_f: X3: 64 (24.9 bits)
gap_trigger    : S1: 42 (22.0 bits)
blast_cutoff   : S2: 59 (27.4 bits)
noevent        : 
noevent        : </PRE>
*************** end_parameters
noevent        : 
noevent        : </BODY>
noevent        : </HTML>
noevent        : </BODY>
noevent        : </HTML>
************************************************** TESTING bt032
noevent        : <HTML>
noevent        : <HEAD>
noevent        : <TITLE>BLAST Search Results </TITLE>
noevent        : </HEAD>
noevent        : <BODY BGCOLOR="#FFFFFF" LINK="#0000FF" VLINK="#660099" ALINK="#
noevent        : <A HREF="http://www.ncbi.nlm.nih.gov/BLAST/blast_form.map"> <IM
noevent        : <BR><BR><PRE>
*************** start_header
version        : <b>TBLASTX 2.0.10 [Aug-26-1999]</b>
noevent        : 
noevent        : 
reference      : <b><a href="http://www.ncbi.nlm.nih.gov/htbin-
reference      : post/Entrez/query?uid=9254694&form=6&db=m&Dopt=r">Reference</a>
reference      : Altschul, Stephen F., Thomas L. Madden, Alejandro A. Sch&auml;f
reference      : Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1
reference      : "Gapped BLAST and PSI-BLAST: a new generation of protein databa
reference      : programs",  Nucleic Acids Res. 25:3389-3402.
noevent        : <p>
query_info     : <b>Query=</b> gi|1348853|gb|G26621.1|G26621 human STS STS_D1200
query_info     :          (615 letters)
noevent        : 
database_info  : <b>Database:</b> Non-redundant Database of GenBank STS Division
database_info  :            89,526 sequences; 32,906,604 total letters
noevent        : 
noevent        : <p> <p>If you have any problems or questions with the results o
noevent        : <FORM NAME="BLASTFORM">
noevent        : </PRE>
noevent        : <CENTER>
noevent        : <H3><a href="/BLAST/newoptions.html#graphical-overview"> Distri
noevent        : <input name=defline size=80 value="Mouse-over to show defline a
noevent        : </CENTER>
noevent        : <map name=img_map>
noevent        : <area shape=rect coords=69,88,524,93 href="#1348853" ONMOUSEOVE
noevent        : <area shape=rect coords=69,95,420,100 href="#1348016" ONMOUSEOV
noevent        : <area shape=rect coords=224,102,284,107 href="#3403105" ONMOUSE
noevent        : <area shape=rect coords=261,109,302,114 href="#1234967" ONMOUSE
noevent        : <area shape=rect coords=94,102,146,107 href="#4185670" ONMOUSEO
noevent        : <area shape=rect coords=71,109,146,114 href="#4757419" ONMOUSEO
noevent        : <area shape=rect coords=79,116,140,121 href="#6120694" ONMOUSEO
noevent        : <area shape=rect coords=218,116,270,121 href="#5225124" ONMOUSE
noevent        : <area shape=rect coords=86,123,158,128 href="#1311530" ONMOUSEO
noevent        : <area shape=rect coords=120,130,153,135 href="#2734624" ONMOUSE
noevent        : <area shape=rect coords=198,123,281,128 href="#2226478" ONMOUSE
noevent        : <area shape=rect coords=220,130,277,135 href="#4631518" ONMOUSE
noevent        : </map>
noevent        : <CENTER>
noevent        : <IMG WIDTH=529 HEIGHT=137 USEMAP=#img_map BORDER=1 SRC="nph-get
noevent        : <HR>
noevent        : <PRE>
noevent        : <PRE>
noevent        : 
*************** end_header
*************** start_descriptions
description_hea: 
description_hea: Sequences producing significant alignments:
noevent        : 
description    : <a href="http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=R
description    : <a href="http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=R
description    : <a href="http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=R
description    : <a href="http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=R
description    : <a href="http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=R
description    : <a href="http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=R
description    : <a href="http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=R
description    : <a href="http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=R
description    : <a href="http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=R
description    : <a href="http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=R
description    : <a href="http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=R
description    : <a href="http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=R
noevent        : 
*************** end_descriptions
*************** start_alignment
noevent        : <PRE>
title          : <a name = 1348853> </a><a href="http://www.ncbi.nlm.nih.gov:80/
title          :            SHGC-32705.
length         :            Length = 615
noevent        : 
*************** start_hsp
score          :  Score =  367 bits (796), Expect = e-102
identities     :  Identities = 200/200 (100%), Positives = 200/200 (100%)
frame          :  Frame = +2 / +2
noevent        : 
noevent        : 
query          : Query: 2   IRMPLHS*DSSFCPL*QEKWECMQSSQKKQKRPKRCLQPHPLNWP*LGLNAL
align          :            IRMPLHS*DSSFCPL*QEKWECMQSSQKKQKRPKRCLQPHPLNWP*LGLNAL
sbjct          : Sbjct: 2   IRMPLHS*DSSFCPL*QEKWECMQSSQKKQKRPKRCLQPHPLNWP*LGLNAL
noevent        : 
noevent        : 
query          : Query: 182 HRLFQTSIVFYVTCFTASSQQLLTTAQFSPLQPLFWWTNNLGTPNPGRKNIQ
align          :            HRLFQTSIVFYVTCFTASSQQLLTTAQFSPLQPLFWWTNNLGTPNPGRKNIQ
sbjct          : Sbjct: 182 HRLFQTSIVFYVTCFTASSQQLLTTAQFSPLQPLFWWTNNLGTPNPGRKNIQ
noevent        : 
noevent        : 
query          : Query: 362 S*NGFPKLVTHGPGXVXLXLXGLSSFQEFXSTVANPWGX*XXXXXXXXXFXX
align          :            S*NGFPKLVTHGPG V L L GLSSFQEF STVANPWG *         F
sbjct          : Sbjct: 362 S*NGFPKLVTHGPGXVXLXLXGLSSFQEFXSTVANPWGX*XXXXXXXXXFXX
noevent        : 
noevent        : 
query          : Query: 542 XXXGGCXXVXXVXXXWXXXF 601
align          :               GGC  V  V   W   F
sbjct          : Sbjct: 542 XXXGGCXXVXXVXXXWXXXF 601
noevent        : </PRE>
noevent        : 
noevent        : 
*************** end_hsp
*************** start_hsp
noevent        : <PRE>
score          :  Score =  340 bits (736), Expect = 9e-94
identities     :  Identities = 204/204 (100%), Positives = 204/204 (100%)
frame          :  Frame = +3 / +3
noevent        : 
noevent        : 
query          : Query: 3   SECPSTHETLHFVHFDRKSGNVCRALKRNKKGQNGAFSHIL*IGPDLD*MH*
align          :            SECPSTHETLHFVHFDRKSGNVCRALKRNKKGQNGAFSHIL*IGPDLD*MH*
sbjct          : Sbjct: 3   SECPSTHETLHFVHFDRKSGNVCRALKRNKKGQNGAFSHIL*IGPDLD*MH*
noevent        : 
noevent        : 
query          : Query: 183 IGYFKPALFFM*PVLPHLLSSF*PLLNFLLYSHCSGGQIT*VLQILAGKIYS
align          :            IGYFKPALFFM*PVLPHLLSSF*PLLNFLLYSHCSGGQIT*VLQILAGKIYS
sbjct          : Sbjct: 183 IGYFKPALFFM*PVLPHLLSSF*PLLNFLLYSHCSGGQIT*VLQILAGKIYS
noevent        : 
noevent        : 
query          : Query: 363 PKMDFQSWLHMALXXSY*XXXGFLXFRSXGQRWQIXGVXXWXGXLXXXXFXG
align          :            PKMDFQSWLHMAL  SY*   GFL FRS GQRWQI GV  W G L    F G
sbjct          : Sbjct: 363 PKMDFQSWLHMALXXSY*XXXGFLXFRSXGQRWQIXGVXXWXGXLXXXXFXG
noevent        : 
noevent        : 
query          : Query: 543 SXXVGAXGXXXFXXXGXXXXXXXW 614
align          :            S  VGA G   F   G       W
sbjct          : Sbjct: 543 SXXVGAXGXXXFXXXGXXXXXXXW 614
noevent        : </PRE>
noevent        : 
noevent        : 
*************** end_hsp
*************** start_hsp
noevent        : <PRE>
score          :  Score =  350 bits (759), Expect = 6e-97
identities     :  Identities = 195/205 (95%), Positives = 195/205 (95%)
frame          :  Frame = +1 / +1
noevent        : 
noevent        : 
query          : Query: 1   DQNAPPLMRLFILSTLTGKVGMYAELSKETKKAKTVPSATSSELALTWTKCT
align          :            DQNAPPLMRLFILSTLTGKVGMYAELSKETKKAKTVPSATSSELALTWTKCT
sbjct          : Sbjct: 1   DQNAPPLMRLFILSTLTGKVGMYAELSKETKKAKTVPSATSSELALTWTKCT
noevent        : 
noevent        : 
query          : Query: 181 A*VISNQHCFLCNLFYRIFSAASDHCSIFSFTAIVLVDK*PRYSKSWQEKYT
align          :            A*VISNQHCFLCNLFYRIFSAASDHCSIFSFTAIVLVDK*PRYSKSWQEKYT
sbjct          : Sbjct: 181 A*VISNQHCFLCNLFYRIFSAASDHCSIFSFTAIVLVDK*PRYSKSWQEKYT
noevent        : 
noevent        : 
query          : Query: 361 ILKWISKAGYTWPWXXXIXFXXAFFXXXXXXXXXXXXXXLXGXVX*XXXXSX
align          :            ILKWISKAGYTWPW   I F  AFF              L G V *    S
sbjct          : Sbjct: 361 ILKWISKAGYTWPWXXXIXFXXAFFXSGVXVNGGKSXGXLXGXVX*XXXXSX
noevent        : 
noevent        : 
query          : Query: 541 XPXGWVXXGXFXFXXXXXXFXXXLG 615
align          :             P GWV  G F F      F   LG
sbjct          : Sbjct: 541 XPXGWVXXGXFXFXXXXXXFXXXLG 615
noevent        : </PRE>
noevent        : 
noevent        : 
*************** end_hsp
*************** start_hsp
noevent        : <PRE>
score          :  Score =  398 bits (864), Expect = e-111
identities     :  Identities = 205/205 (100%), Positives = 205/205 (100%)
frame          :  Frame = -1 / -1
noevent        : 
noevent        : 
query          : Query: 615 PKXXXKXXXXXXKTKXTXXHPPXWXXNXXXLWPXXXXXXLXNXXX*XPXGFA
align          :            PK   K      KTK T  HPP W  N   LWP      L N   * P GFA
sbjct          : Sbjct: 615 PKXXXKXXXXXXKTKXTXXHPPXWXXNXXXLWPXXXXXXLXNXXX*XPXGFA
noevent        : 
noevent        : 
query          : Query: 435 EESPXKXNXTXPGPCVTSFGNPF*DYXSAXS*CCIFFLPGFGVPRLFVHQNN
align          :            EESP K N T PGPCVTSFGNPF*DY SA S*CCIFFLPGFGVPRLFVHQNN
sbjct          : Sbjct: 435 EESPXKXNXTXPGPCVTSFGNPF*DYXSAXS*CCIFFLPGFGVPRLFVHQNN
noevent        : 
noevent        : 
query          : Query: 255 VVRSC*EDAVKQVT*KTMLV*NNLCAFVKGFCISAFSPSQGQFRGCG*RHRF
align          :            VVRSC*EDAVKQVT*KTMLV*NNLCAFVKGFCISAFSPSQGQFRGCG*RHRF
sbjct          : Sbjct: 255 VVRSC*EDAVKQVT*KTMLV*NNLCAFVKGFCISAFSPSQGQFRGCG*RHRF
noevent        : 
noevent        : 
query          : Query: 75  LCIHSHFSCQSGQNEESHEWRGILI 1
align          :            LCIHSHFSCQSGQNEESHEWRGILI
sbjct          : Sbjct: 75  LCIHSHFSCQSGQNEESHEWRGILI 1
noevent        : </PRE>
noevent        : 
noevent        : 
*************** end_hsp
*************** start_hsp
noevent        : <PRE>
score          :  Score =  390 bits (846), Expect = e-109
identities     :  Identities = 196/196 (100%), Positives = 196/196 (100%)
frame          :  Frame = -3 / -3
noevent        : 
noevent        : 
query          : Query: 589 PXXXNXXNPXAPTXXXX*PXPPXAPXKXXXXXXPXXLXTPXICHR*PKLLKX
align          :            P   N  NP APT    *P PP AP K      P  L TP ICHR*PKLLK
sbjct          : Sbjct: 589 PXXXNXXNPXAPTXXXX*PXPPXAPXKXXXXXXPXXLXTPXICHR*PKLLKX
noevent        : 
noevent        : 
query          : Query: 409 DXXRAMCNQLWKSILGLXECXFIMLYIFPARIWST*VICPPEQWL*RRKLSS
align          :            D  RAMCNQLWKSILGL EC FIMLYIFPARIWST*VICPPEQWL*RRKLSS
sbjct          : Sbjct: 409 DXXRAMCNQLWKSILGLXECXFIMLYIFPARIWST*VICPPEQWL*RRKLSS
noevent        : 
noevent        : 
query          : Query: 229 GKTGYIKNNAGLK*PMRFCQGILH*CI*SKSGPIQRMWLKAPFWPFLFLLRA
align          :            GKTGYIKNNAGLK*PMRFCQGILH*CI*SKSGPIQRMWLKAPFWPFLFLLRA
sbjct          : Sbjct: 229 GKTGYIKNNAGLK*PMRFCQGILH*CI*SKSGPIQRMWLKAPFWPFLFLLRA
noevent        : 
noevent        : 
query          : Query: 49  SKWTK*RVS*VEGHSD 2
align          :            SKWTK*RVS*VEGHSD
sbjct          : Sbjct: 49  SKWTK*RVS*VEGHSD 2
noevent        : </PRE>
noevent        : 
noevent        : 
*************** end_hsp
*************** start_hsp
noevent        : <PRE>
score          :  Score =  281 bits (608), Expect = 4e-76
identities     :  Identities = 122/122 (100%), Positives = 122/122 (100%)
frame          :  Frame = -2 / -2
noevent        : 
noevent        : 
query          : Query: 368 FRIT*VLXHNAVYFSCQDLEYLGYLSTRTMAVKEKIEQWSEAAEKMR*NRLH
align          :            FRIT*VL HNAVYFSCQDLEYLGYLSTRTMAVKEKIEQWSEAAEKMR*NRLH
sbjct          : Sbjct: 368 FRIT*VLXHNAVYFSCQDLEYLGYLSTRTMAVKEKIEQWSEAAEKMR*NRLH
noevent        : 
noevent        : 
query          : Query: 188 TYALLSRDFALVHLVQVRANSEDVAEGTVLAFFVSFESSAYIPTFPVKVDKM
align          :            TYALLSRDFALVHLVQVRANSEDVAEGTVLAFFVSFESSAYIPTFPVKVDKM
sbjct          : Sbjct: 188 TYALLSRDFALVHLVQVRANSEDVAEGTVLAFFVSFESSAYIPTFPVKVDKM
noevent        : 
noevent        : 
query          : Query: 8   F* 3
align          :            F*
sbjct          : Sbjct: 8   F* 3
noevent        : </PRE>
noevent        : 
noevent        : 
*************** end_hsp
*************** end_alignment
*************** start_alignment
noevent        : <PRE>
title          : <a name = 1348016> </a><a href="http://www.ncbi.nlm.nih.gov:80/
length         :            Length = 617
noevent        : 
*************** start_hsp
score          :  Score =  273 bits (590), Expect = 1e-73
identities     :  Identities = 121/133 (90%), Positives = 121/133 (90%)
frame          :  Frame = +1 / +1
noevent        : 
noevent        : 
query          : Query: 1   DQNAPPLMRLFILSTLTGKVGMYAELSKETKKAKTVPSATSSELALTWTKCT
align          :            DQ APPLMRLFILSTLTGKVGMYAELSKETKKAKTVPSATSSELALTWTK
sbjct          : Sbjct: 1   DQXAPPLMRLFILSTLTGKVGMYAELSKETKKAKTVPSATSSELALTWTKXX
noevent        : 
noevent        : 
query          : Query: 181 A*VISNQHCFLCNLFYRIFSAASDHCSIFSFTAIVLVDK*PRYSKSWQEKYT
align          :            A*VISNQHCFLCNLFYRIFSAASDHCSIFSFTAIVLVDK*PRYSKSWQEKYT
sbjct          : Sbjct: 181 A*VISNQHCFLCNLFYRIFSAASDHCSIFSFTAIVLVDK*PRYSKSWQEKYT
noevent        : 
noevent        : 
query          : Query: 361 ILKWISKAGYTWP 399
align          :                 SKAGYT P
sbjct          : Sbjct: 361 S*NGFSKAGYTXP 399
noevent        : </PRE>
noevent        : 
noevent        : 
*************** end_hsp
*************** start_hsp
noevent        : <PRE>
score          :  Score =  289 bits (626), Expect = 1e-78
identities     :  Identities = 129/158 (81%), Positives = 131/158 (82%)
frame          :  Frame = +2 / +2
noevent        : 
noevent        : 
query          : Query: 2   IRMPLHS*DSSFCPL*QEKWECMQSSQKKQKRPKRCLQPHPLNWP*LGLNAL
align          :            IR PLHS*DSSFCPL*QEKWECMQSSQKKQKRPKRCLQPHPLNWP*LGL  L
sbjct          : Sbjct: 2   IRXPLHS*DSSFCPL*QEKWECMQSSQKKQKRPKRCLQPHPLNWP*LGLXPL
noevent        : 
noevent        : 
query          : Query: 182 HRLFQTSIVFYVTCFTASSQQLLTTAQFSPLQPLFWWTNNLGTPNPGRKNIQ
align          :            HRLFQTSIVFYVTCFTASSQQLLTTAQF PLQPLFWWTNNLGTPNPGRKNIQ
sbjct          : Sbjct: 182 HRLFQTSIVFYVTCFTASSQQLLTTAQFFPLQPLFWWTNNLGTPNPGRKNIQ
noevent        : 
noevent        : 
query          : Query: 362 S*NGFPKLVTHGPGXVXLXLXGLSSFQEFXSTVANPWG 475
align          :                FPKLVTH    +         +Q F ST ANPWG
sbjct          : Sbjct: 362 PKMDFPKLVTHXLQSLI*I*KAFLIYQGFRSTXANPWG 475
noevent        : </PRE>
noevent        : 
noevent        : 
*************** end_hsp
*************** start_hsp
noevent        : <PRE>
score          :  Score =  248 bits (535), Expect = 5e-66
identities     :  Identities = 128/157 (81%), Positives = 129/157 (81%)
frame          :  Frame = +3 / +3
noevent        : 
noevent        : 
query          : Query: 3   SECPSTHETLHFVHFDRKSGNVCRALKRNKKGQNGAFSHIL*IGPDLD*MH*
align          :            S CPSTHETLHFVHFDRKSGNVCRALKRNKKGQNGAFSHIL*IGPDLD*  *
sbjct          : Sbjct: 3   SXCPSTHETLHFVHFDRKSGNVCRALKRNKKGQNGAFSHIL*IGPDLD*XX*
noevent        : 
noevent        : 
query          : Query: 183 IGYFKPALFFM*PVLPHLLSSF*PLLNFLLYSHCSGGQIT*VLQILAGKIYS
align          :            IGYFKPALFFM*PVLPHLLSSF*PLLNF LYSHCSGGQIT*VLQILAGKIYS
sbjct          : Sbjct: 183 IGYFKPALFFM*PVLPHLLSSF*PLLNFFLYSHCSGGQIT*VLQILAGKIYS
noevent        : 
noevent        : 
query          : Query: 363 PKMDFQSWLHMALXXSY*XXXGFLXFRSXGQRWQIXG 473
align          :             K  FQSWLHM     +     F   R  GQR Q  G
sbjct          : Sbjct: 363 LKWIFQSWLHMXCKVLFKFKRPFSFTRGLGQRXQTPG 473
noevent        : </PRE>
noevent        : 
noevent        : 
*************** end_hsp
*************** start_hsp
noevent        : <PRE>
score          :  Score =  302 bits (653), Expect = 2e-82
identities     :  Identities = 128/157 (81%), Positives = 132/157 (83%)
frame          :  Frame = -3 / -2
noevent        : 
noevent        : 
query          : Query: 472 PXICHR*PKLLKXRKPX*XQXDXXRAMCNQLWKSILGLXECXFIMLYIFPAR
align          :            P +C R*PK L   K         + MCNQLWK    + EC FIMLYIFPAR
sbjct          : Sbjct: 472 PGVCXR*PKPLVNEKGLLNLNKTLQXMCNQLWKIHFRITECCFIMLYIFPAR
noevent        : 
noevent        : 
query          : Query: 292 PPEQWL*RRKLSSGQKLLRRCGKTGYIKNNAGLK*PMRFCQGILH*CI*SKS
align          :            PPEQWL*R+KLSSGQKLLRRCGKTGYIKNNAGLK*PMRFCQGILH*  *SKS
sbjct          : Sbjct: 292 PPEQWL*RKKLSSGQKLLRRCGKTGYIKNNAGLK*PMRFCQGILH*XX*SKS
noevent        : 
noevent        : 
query          : Query: 112 KAPFWPFLFLLRALHTFPLFLSKWTK*RVS*VEGHSD 2
align          :            KAPFWPFLFLLRALHTFPLFLSKWTK*RVS*VEG SD
sbjct          : Sbjct: 112 KAPFWPFLFLLRALHTFPLFLSKWTK*RVS*VEGXSD 2
noevent        : </PRE>
noevent        : 
noevent        : 
*************** end_hsp
*************** start_hsp
noevent        : <PRE>
score          :  Score =  276 bits (598), Expect = 1e-74
identities     :  Identities = 122/130 (93%), Positives = 122/130 (93%)
frame          :  Frame = -2 / -1
noevent        : 
noevent        : 
query          : Query: 398 GHV*PALEIHFRIT*VLXHNAVYFSCQDLEYLGYLSTRTMAVKEKIEQWSEA
align          :            GHV*PALE  F   *VL HNAVYFSCQDLEYLGYLSTRTMAVKEKIEQWSEA
sbjct          : Sbjct: 398 GHV*PALENPF*DY*VLFHNAVYFSCQDLEYLGYLSTRTMAVKEKIEQWSEA
noevent        : 
noevent        : 
query          : Query: 218 LHKKQCWFEITYALLSRDFALVHLVQVRANSEDVAEGTVLAFFVSFESSAYI
align          :            LHKKQCWFEITYALLSRDFAL  LVQVRANSEDVAEGTVLAFFVSFESSAYI
sbjct          : Sbjct: 218 LHKKQCWFEITYALLSRDFALXXLVQVRANSEDVAEGTVLAFFVSFESSAYI
noevent        : 
noevent        : 
query          : Query: 38  KMKSLMSGGA 9
align          :            KMKSLMSGGA
sbjct          : Sbjct: 38  KMKSLMSGGA 9
noevent        : </PRE>
noevent        : 
noevent        : 
*************** end_hsp
*************** start_hsp
noevent        : <PRE>
score          :  Score =  290 bits (628), Expect = 7e-79
identities     :  Identities = 119/131 (90%), Positives = 120/131 (90%)
frame          :  Frame = -1 / -3
noevent        : 
noevent        : 
query          : Query: 393 CVTSFGNPF*DYXSAXS*CCIFFLPGFGVPRLFVHQNNGCKGEN*AVVRSC*
align          :            CVTSFG       SA S*CCIFFLPGFGVPRLFVHQNNGCKG+N*AVVRSC*
sbjct          : Sbjct: 393 CVTSFGKSILGLLSAVS*CCIFFLPGFGVPRLFVHQNNGCKGKN*AVVRSC*
noevent        : 
noevent        : 
query          : Query: 213 *KTMLV*NNLCAFVKGFCISAFSPSQGQFRGCG*RHRFGLFCFF*ELCIHSH
align          :            *KTMLV*NNLCAFVKGFCI  FSPSQGQFRGCG*RHRFGLFCFF*ELCIHSH
sbjct          : Sbjct: 213 *KTMLV*NNLCAFVKGFCIXGFSPSQGQFRGCG*RHRFGLFCFF*ELCIHSH
noevent        : 
noevent        : 
query          : Query: 33  EESHEWRGILI 1
align          :            EESHEWRG LI
sbjct          : Sbjct: 33  EESHEWRGXLI 1
noevent        : </PRE>
noevent        : 
noevent        : 
*************** end_hsp
*************** end_alignment
*************** start_alignment
noevent        : <PRE>
title          : <a name = 3403105> </a><a href="http://www.ncbi.nlm.nih.gov:80/
length         :            Length = 351
noevent        : 
*************** start_hsp
score          :  Score = 30.8 bits (61), Expect = 1.1
identities     :  Identities = 11/27 (40%), Positives = 18/27 (65%)
frame          :  Frame = +1 / +2
noevent        : 
noevent        : 
query          : Query: 211 LCNLFYRIFSAASDHCSIFSFTAIVLV 291
align          :            L NL +R+F++  DHCS+  F   V++
sbjct          : Sbjct: 2   LTNLIFRLFTSK*DHCSLKQFNNKVVI 82
noevent        : </PRE>
noevent        : 
noevent        : 
*************** end_hsp
*************** end_alignment
*************** start_alignment
noevent        : <PRE>
title          : <a name = 1234967> </a><a href="http://www.ncbi.nlm.nih.gov:80/
title          :            AFMb316xa9; single read, sequence tagged site [Homo
title          :            sapiens]
length         :            Length = 345
noevent        : 
*************** start_hsp
score          :  Score = 30.4 bits (60), Expect = 1.5
identities     :  Identities = 10/19 (52%), Positives = 13/19 (67%)
frame          :  Frame = -3 / +1
noevent        : 
noevent        : 
query          : Query: 316 IWST*VICPPEQWL*RRKL 260
align          :            +W T  +CPP  W *RR+L
sbjct          : Sbjct: 226 LWGTAPLCPPVPWA*RRQL 282
noevent        : </PRE>
noevent        : 
noevent        : 
*************** end_hsp
*************** end_alignment
*************** start_alignment
noevent        : <PRE>
title          : <a name = 4185670> </a><a href="http://www.ncbi.nlm.nih.gov:80/
length         :            Length = 1200
noevent        : 
*************** start_hsp
score          :  Score = 29.9 bits (59), Expect = 2.1
identities     :  Identities = 10/24 (41%), Positives = 14/24 (57%)
frame          :  Frame = -3 / -2
noevent        : 
noevent        : 
query          : Query: 106 PFWPFLFLLRALHTFPLFLSKWTK 35
align          :            P WP + LL  +H+FP  +  W K
sbjct          : Sbjct: 716 PEWPSINLLPGMHSFPRVIPCWEK 645
noevent        : </PRE>
noevent        : 
noevent        : 
*************** end_hsp
*************** end_alignment
*************** start_alignment
noevent        : <PRE>
title          : <a name = 4757419> </a><a href="http://www.ncbi.nlm.nih.gov:80/
title          :            genomic clone 116F5, sequence tagged site
length         :            Length = 375
noevent        : 
*************** start_hsp
score          :  Score = 29.5 bits (58), Expect = 2.9
identities     :  Identities = 15/34 (44%), Positives = 17/34 (49%)
frame          :  Frame = -3 / -2
noevent        : 
noevent        : 
query          : Query: 106 PFWPFLFLLRALHTFPLFLSKWTK*RVS*VEGHS 5
align          :            P W   FLLR LHT P    K+    V+  EG S
sbjct          : Sbjct: 176 PGWTLRFLLRGLHTPPKAAEKFPSQGVAEPEGFS 75
noevent        : </PRE>
noevent        : 
noevent        : 
*************** end_hsp
*************** end_alignment
*************** start_alignment
noevent        : <PRE>
title          : <a name = 5225124> </a><a href="http://www.ncbi.nlm.nih.gov:80/
length         :            Length = 444
noevent        : 
*************** start_hsp
score          :  Score = 28.6 bits (56), Expect = 5.5
identities     :  Identities = 10/24 (41%), Positives = 15/24 (61%)
frame          :  Frame = +1 / -2
noevent        : 
noevent        : 
query          : Query: 202 HCFLCNLFYRIFSAASDHCSIFSF 273
align          :            HC L ++F RIF    +  S+F+F
sbjct          : Sbjct: 443 HCHLSSVFCRIFFTLEESLSLFAF 372
noevent        : </PRE>
noevent        : 
noevent        : 
*************** end_hsp
*************** end_alignment
*************** start_alignment
noevent        : <PRE>
title          : <a name = 6120694> </a><a href="http://www.ncbi.nlm.nih.gov:80/
length         :            Length = 460
noevent        : 
*************** start_hsp
score          :  Score = 28.6 bits (56), Expect = 5.5
identities     :  Identities = 9/28 (32%), Positives = 16/28 (57%)
frame          :  Frame = +3 / +1
noevent        : 
noevent        : 
query          : Query: 15  STHETLHFVHFDRKSGNVCRALKRNKKG 98
align          :            +TH    F+H  +K  N+C  +  N++G
sbjct          : Sbjct: 82  TTHSMTVFLHVKKKLSNICIYMPENREG 165
noevent        : </PRE>
noevent        : 
noevent        : 
*************** end_hsp
*************** end_alignment
*************** start_alignment
noevent        : <PRE>
title          : <a name = 2226478> </a><a href="http://www.ncbi.nlm.nih.gov:80/
length         :            Length = 299
noevent        : 
*************** start_hsp
score          :  Score = 28.1 bits (55), Expect = 7.5
identities     :  Identities = 13/38 (34%), Positives = 19/38 (49%)
frame          :  Frame = +1 / +2
noevent        : 
noevent        : 
query          : Query: 175 KSA*VISNQHCFLCNLFYRIFSAASDHCSIFSFTAIVL 288
align          :            +SA +I   HC    +   +FS ASD  S    T ++L
sbjct          : Sbjct: 119 QSAWIIGMSHCAWAVIHCLLFSTASDEKSAVDLTGVLL 232
noevent        : </PRE>
noevent        : 
noevent        : 
*************** end_hsp
*************** end_alignment
*************** start_alignment
noevent        : <PRE>
title          : <a name = 1311530> </a><a href="http://www.ncbi.nlm.nih.gov:80/
length         :            Length = 196
noevent        : 
*************** start_hsp
score          :  Score = 28.1 bits (55), Expect = 7.5
identities     :  Identities = 9/33 (27%), Positives = 19/33 (57%)
frame          :  Frame = +3 / -2
noevent        : 
noevent        : 
query          : Query: 24  ETLHFVHFDRKSGNVCRALKRNKKGQNGAFSHI 122
align          :            E +H+V F +  G +  + ++ ++ QN   SH+
sbjct          : Sbjct: 141 EKIHYVLF*KNCGKIMTS*RQRQENQNNLLSHV 43
noevent        : </PRE>
noevent        : 
noevent        : 
*************** end_hsp
*************** end_alignment
*************** start_alignment
noevent        : <PRE>
title          : <a name = 4631518> </a><a href="http://www.ncbi.nlm.nih.gov:80/
title          :            sequence tagged site
length         :            Length = 351
noevent        : 
*************** start_hsp
score          :  Score = 28.1 bits (55), Expect = 7.5
identities     :  Identities = 8/26 (30%), Positives = 15/26 (56%)
frame          :  Frame = +1 / +3
noevent        : 
noevent        : 
query          : Query: 205 CFLCNLFYRIFSAASDHCSIFSFTAI 282
align          :            CF+C L  +I+  A +   +  FT++
sbjct          : Sbjct: 249 CFICKLVLKIYLRAEERTQLIEFTSL 326
noevent        : </PRE>
noevent        : 
noevent        : 
*************** end_hsp
*************** end_alignment
*************** start_alignment
noevent        : <PRE>
title          : <a name = 2734624> </a><a href="http://www.ncbi.nlm.nih.gov:80/
length         :            Length = 466
noevent        : 
*************** start_hsp
score          :  Score = 28.1 bits (55), Expect = 7.5
identities     :  Identities = 10/15 (66%), Positives = 11/15 (72%)
frame          :  Frame = -3 / -3
noevent        : 
noevent        : 
query          : Query: 115 LKAPFWPFLFLLRAL 71
align          :            L  PFW FLF L+AL
sbjct          : Sbjct: 242 LSVPFWKFLFYLQAL 198
noevent        : </PRE>
noevent        : 
noevent        : 
noevent        : 
*************** end_hsp
*************** end_alignment
*************** start_database_report
noevent        : <PRE>
database       :   Database: Non-redundant Database of GenBank STS Division
posted_date    :     Posted date:  Dec 28, 1999  3:49 PM
num_letters_in_:   Number of letters in database: 32,906,604
num_sequences_i:   Number of sequences in database:  89,526
noevent        : 
noevent        : Lambda     K      H
ka_params      :    0.318    0.135    0.401
noevent        : 
noevent        : 
*************** end_database_report
*************** start_parameters
matrix         : Matrix: BLOSUM62
num_hits       : Number of Hits to DB: 1st pass: 41589935, 2nd pass: 9765
num_sequences  : Number of Sequences: 1st pass: 89526, 2nd pass: 84
num_extends    : Number of extensions: 1st pass: 501394, 2nd pass: 6747
num_good_extend: Number of successful extensions: 1st pass: 14, 2nd pass: 49
num_seqs_better: Number of sequences better than 10.0: 20
query_length   : length of query: 205
database_length: length of database: 10,968,868
effective_hsp_l: effective HSP length: 46
effective_query: effective length of query: 158
effective_datab: effective length of database: 6,850,672
effective_searc: effective search space: 1082406176
effective_searc: effective search space used: 1082406176
frameshift     : frameshift window, decay const: 50,  0.5
threshold      : T: 13
window_size    : A: 40
dropoff_1st_pas: X1: 16 ( 7.3 bits)
gap_x_dropoff  : X2: 0 ( 0.0 bits)
gap_trigger    : S1: 41 (21.7 bits)
blast_cutoff   : S2: 52 (26.7 bits)
noevent        : 
noevent        : </PRE>
*************** end_parameters
noevent        : 
noevent        : </BODY>
noevent        : </HTML>
noevent        : </BODY>
noevent        : </HTML>
Running tests on BlastParser
************************************************** TESTING bt019
************************************************** TESTING bt020
************************************************** TESTING bt021
************************************************** TESTING bt022
************************************************** TESTING bt023
************************************************** TESTING bt024
************************************************** TESTING bt025
************************************************** TESTING bt026
************************************************** TESTING bt027
************************************************** TESTING bt028
************************************************** TESTING bt029
************************************************** TESTING bt030
************************************************** TESTING bt031
************************************************** TESTING bt032
************************************************** TESTING bt033
************************************************** TESTING bt034
************************************************** TESTING bt035
************************************************** TESTING bt036
************************************************** TESTING bt037
************************************************** TESTING bt038
************************************************** TESTING bt061
************************************************** TESTING bt064
************************************************** TESTING bt066
************************************************** TESTING bt069
************************************************** TESTING bt070
