METATOOL OUTPUT Version 3.5 (28.03.2001) C:\METATOOL\META35~1.EXE

INPUT FILE: EXAMPLE13.TXT

INTERNAL METABOLITES: 19
REACTIONS: 6

  3 external H2O
  1 int      5,10-Methylenetetrahydrofolate
  1 int      glycine
  1 int      tetrahydrofolate
  1 int      L-serine
  1 int      (5-L-Glutamyl)-peptide
  1 int      an_amino_acid
  1 int      peptide
  1 int      5-L-glutamyl_amino_acid
  1 int      beta-D-oligosaccarides
  1 int      n_D-glucose
  1 int      L-Asparagine
  1 int      L-aspartate
  1 int      NH3
  1 int      ATP
  1 int      L-Asp
  1 int      NH4+
  1 int      AMP
  1 int      diphosphate
  1 int      L-Asn
 20 metabolites,  22 is the summarized frequency

edges	frequency of nodes
  0	  0
  1	 19
  2	  0
  3	  1

STOICHIOMETRIC MATRIX
 
 matrix dimension r19 x c6
-1  0  0  0  0  0 
-1  0  0  0  0  0 
 1  0  0  0  0  0 
 1  0  0  0  0  0 
 0  0 -1  0  0  0 
 0  0 -1  0  0  0 
 0  0  1  0  0  0 
 0  0  1  0  0  0 
 0  0  0 -1  0  0 
 0  0  0  1  0  0 
 0  0  0  0 -1  0 
 0  0  0  0  1  0 
 0  0  0  0  1  0 
 0  0  0  0  0 -1 
 0  0  0  0  0 -1 
 0  0  0  0  0 -1 
 0  0  0  0  0  1 
 0  0  0  0  0  1 
 0  0  0  0  0  1 
The following line indicates reversible (0) and irreversible reactions (1)
 0  1  1  1  1  1 
rows and columns are sorted as declared in the inputfile

NOT BALANCED INTERNAL METABOLITES
5,10-Methylenetetrahydrofolate	glycine	tetrahydrofolate	L-serine	(5-L-Glutamyl)-peptide	an_amino_acid	peptide	5-L-glutamyl_amino_acid	beta-D-oligosaccarides	n_D-glucose	L-Asparagine	L-aspartate	NH3	ATP	L-Asp	NH4+	AMP	diphosphate	L-Asn	

KERNEL
 
 matrix dimension r1 x c6
 0  1  0  0  0  0 
6 reactions (columns) are sorted in the same order as in the ENZREV ENZIRREV section.

 enzymes

 1:	 2.1.2.1 irreversible

 overall reaction
 - not found -


The remaining overall reactions perform no net transformation of external metabolites.

SUBSETS OF REACTIONS
 
 matrix dimension r1 x c6
 0  1  0  0  0  0 
6 reactions (columns) are sorted in the same order as in the ENZREV ENZIRREV section.

 enzymes

 1:	 2.1.2.1 irreversible

 overall reaction
 - not found -


The remaining overall reactions perform no net transformation of external metabolites.

REDUCED SYSTEM with 19 branch point metabolites in 1 reactions (columns)
 
 matrix dimension r0 x c1
The following line indicates reversible (0) and irreversible reactions (1)
 1 

-> Branch metabolites are : 
met                 	cons	built	reactions

-> No branch metabolites are : 
met                 	cons	built	reactions
5,10-Methylenetetrahydrofolate	1	0	1	r
glycine             	1	0	1	r
tetrahydrofolate    	0	1	1	r
L-serine            	0	1	1	r
(5-L-Glutamyl)-peptide	1	0	1	i
an_amino_acid       	1	0	1	i
peptide             	0	1	1	i
5-L-glutamyl_amino_acid	0	1	1	i
beta-D-oligosaccarides	1	0	1	i
n_D-glucose         	0	1	1	i
L-Asparagine        	1	0	1	i
L-aspartate         	0	1	1	i
NH3                 	0	1	1	i
ATP                 	1	0	1	i
L-Asp               	1	0	1	i
NH4+                	1	0	1	i
AMP                 	0	1	1	i
diphosphate         	0	1	1	i
L-Asn               	0	1	1	i

CONVEX BASIS
 
 matrix dimension r1 x c6
 0  1  0  0  0  0 

 enzymes

 1:	 2.1.2.1 irreversible

 overall reaction
 - not found -


The remaining overall reactions perform no net transformation of external metabolites.

CONSERVATION RELATIONS
 
 matrix dimension r14 x c19
 1 -1  0  0  0  0  0  0  0  0  0  0  0  0  0  0  0  0  0 
 1  0  1  0  0  0  0  0  0  0  0  0  0  0  0  0  0  0  0 
 1  0  0  1  0  0  0  0  0  0  0  0  0  0  0  0  0  0  0 
 0  0  0  0  1 -1  0  0  0  0  0  0  0  0  0  0  0  0  0 
 0  0  0  0  1  0  1  0  0  0  0  0  0  0  0  0  0  0  0 
 0  0  0  0  1  0  0  1  0  0  0  0  0  0  0  0  0  0  0 
 0  0  0  0  0  0  0  0  1  1  0  0  0  0  0  0  0  0  0 
 0  0  0  0  0  0  0  0  0  0  1  1  0  0  0  0  0  0  0 
 0  0  0  0  0  0  0  0  0  0  1  0  1  0  0  0  0  0  0 
 0  0  0  0  0  0  0  0  0  0  0  0  0  1 -1  0  0  0  0 
 0  0  0  0  0  0  0  0  0  0  0  0  0  1  0 -1  0  0  0 
 0  0  0  0  0  0  0  0  0  0  0  0  0  1  0  0  1  0  0 
 0  0  0  0  0  0  0  0  0  0  0  0  0  1  0  0  0  1  0 
 0  0  0  0  0  0  0  0  0  0  0  0  0  1  0  0  0  0  1 
 1 :	5,10-Methylenetetrahydrofolate + glycine = const
 2 :	5,10-Methylenetetrahydrofolate + tetrahydrofolate = const
 3 :	5,10-Methylenetetrahydrofolate + L-serine = const
 4 :	(5-L-Glutamyl)-peptide + an_amino_acid = const
 5 :	(5-L-Glutamyl)-peptide + peptide = const
 6 :	(5-L-Glutamyl)-peptide + 5-L-glutamyl_amino_acid = const
 7 :	beta-D-oligosaccarides + n_D-glucose = const
 8 :	L-Asparagine + L-aspartate = const
 9 :	L-Asparagine + NH3 = const
10 :	ATP + L-Asp = const
11 :	ATP + NH4+ = const
12 :	ATP + AMP = const
13 :	ATP + diphosphate = const
14 :	ATP + L-Asn = const

ELEMENTARY MODES
 
 matrix dimension r1 x c6
 0  1  0  0  0  0 
6 reactions (columns) are sorted in the same order as in the ENZREV ENZIRREV section.

 enzymes

 1:	 2.1.2.1 irreversible

 overall reaction
 - not found -


The remaining overall reactions perform no net transformation of external metabolites.

The elementary modes ARE EQUAL to convex basis.
