BLAST Search Results

    BLASTP 2.0.10 [Aug-26-1999]

    Reference:
    Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
    Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
    "Gapped BLAST and PSI-BLAST: a new generation of protein database search
    programs",  Nucleic Acids Res. 25:3389-3402.

    Query= gi|1709271|sp|P54929|NIFA_AZOLI NIF-SPECIFIC REGULATORY
    PROTEIN.
             (624 letters)

    Database: PDB protein sequences
               7378 sequences; 1,543,095 total letters

     If you have any problems or questions with the results of this search
    please refer to the BLAST FAQs

    No significant similarity found. For reasons why, click here.

      Database: PDB protein sequences
        Posted date:  Dec 29, 1999  5:21 PM
      Number of letters in database: 1,543,095
      Number of sequences in database:  7378

    Lambda     K      H
       0.320    0.138    0.399

    Gapped
    Lambda     K      H
       0.270   0.0470    0.230

    Matrix: BLOSUM62
    Gap Penalties: Existence: 11, Extension: 1
    Number of Hits to DB: 1512037
    Number of Sequences: 7378
    Number of extensions: 54573
    Number of successful extensions: 81
    Number of sequences better than 10.0: 0
    Number of HSP's better than 10.0 without gapping: 0
    Number of HSP's successfully gapped in prelim test: 0
    Number of HSP's that attempted gapping in prelim test: 81
    Number of HSP's gapped (non-prelim): 0
    length of query: 624
    length of database: 1,543,095
    effective HSP length: 46
    effective length of query: 578
    effective length of database: 1,203,707
    effective search space: 695742646
    effective search space used: 695742646
    T: 11
    A: 40
    X1: 16 ( 7.4 bits)
    X2: 38 (14.8 bits)
    X3: 64 (24.9 bits)
    S1: 41 (21.8 bits)
    S2: 56 (26.2 bits)