Uses of Class org.biojava.utils.ChangeType (BioJava-1.5-beta API)

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## Uses of Class
org.biojava.utils.ChangeType

Packages that use ChangeType
org.biojava.bio | The core classes that will be used throughout the bio packages.
org.biojava.bio.alignment | Classes to generate and describe sequence alignments.
org.biojava.bio.dist | Probability distributions over Alphabets.
org.biojava.bio.dp | HMM and Dynamic Programming Algorithms.
org.biojava.bio.gui.sequence | Graphical displays of biological sequences and associated annotations.
org.biojava.bio.program.das | Development client for the Distributed Annotation System.
org.biojava.bio.program.homologene | Support classes for Homologene data.
org.biojava.bio.search | Interfaces and classes for representing sequence similarity search results.
org.biojava.bio.seq | Classes and interfaces for defining biological sequences and informatics objects.
org.biojava.bio.seq.db | Collections of biological sequence data.
org.biojava.bio.seq.distributed | Sequences and SequenceDBs which are composed from data taken from a number of data sources.
org.biojava.bio.seq.homol | The classes and interfaces for defining sequence similarity and honology.
org.biojava.bio.seq.impl | Standard in-memory implementations of `Sequence` and `Feature`.
org.biojava.bio.seq.projection | Code for projecting Feature objects and systematically altering their properties.
org.biojava.bio.symbol | Representation of the Symbols that make up a sequence, and locations within them.
org.biojava.bio.taxa | Taxonomy object for representing species information.
org.biojava.ontology | A general-purpose API for ontologies.
org.biojava.utils | Miscellaneous utility classes used by other BioJava components.
org.biojava.utils.cache | A simple cache system with pluggable caching behaviours.
org.biojavax | The Biojava extensions packages, classes that extend the core biojava functionality
org.biojavax.bio | Classes to represent biological entities and their relationships.
org.biojavax.bio.db | Interactions between biojavax objects and a DB.
org.biojavax.bio.seq | Rich implementations of Sequences, Locations and Features.
org.biojavax.bio.taxa | Objects that model the NCBI taxonomy schema as described in the BioSQL schema.
org.biojavax.ga | Classes to provide a genetic algorithm framework
org.biojavax.ga.functions | GA functions
org.biojavax.ontology | Extensions to the biojava ontology model that represent BioSQL ontology.

Uses of ChangeType in org.biojava.bio

Fields in org.biojava.bio declared as ChangeType
`static ChangeType` | `Annotatable.ANNOTATION` Signals that the associated Annotation has altered in some way.
`static ChangeType` | `MergeAnnotation.ANNOTATION_ADD` ChangeType of ChangeEvent fired before and after an annotation is added to MergeAnnotation.
`static ChangeType` | `MergeAnnotation.ANNOTATION_CHANGED` ChangeType of ChangeEvent fired before and after an annotation is added to MergeAnnotation.
`static ChangeType` | `MergeAnnotation.ANNOTATION_REMOVE` ChangeType of ChangeEvent fired before and after an annotation is added to MergeAnnotation.
`static ChangeType` | `Annotation.PROPERTY` This type symbolizes that one or more properties have changed.

Methods in org.biojava.bio with parameters of type ChangeType
`protected ChangeSupport` | `OverlayAnnotation.getChangeSupport(ChangeType changeType)`
`protected ChangeSupport` | `MergeAnnotation.getChangeSupport(ChangeType changeType)`

Uses of ChangeType in org.biojava.bio.alignment

Fields in org.biojava.bio.alignment declared as ChangeType
`static ChangeType` | `ARAlignment.ADD_LABEL`
`static ChangeType` | `EditableAlignment.GAPS`
`static ChangeType` | `EditableAlignment.LOCATION`
`static ChangeType` | `ARAlignment.REMOVE_LABEL`

Uses of ChangeType in org.biojava.bio.dist

Fields in org.biojava.bio.dist declared as ChangeType
`static ChangeType` | `Count.COUNTS` Whenever a component count changes the values that would be returned by getCount, they should fire a ChangeEvent with this object as the type.
`static ChangeType` | `Distribution.NULL_MODEL` Whenever the null model distribution changes the values that would be returned by getWeight, either by being edited or by being replaced, a ChangeEvent with this object as the type should be thrown.
`static ChangeType` | `Distribution.WEIGHTS` Whenever a distribution changes the values that would be returned by getWeight, they should fire a ChangeEvent with this object as the type.

Methods in org.biojava.bio.dist with parameters of type ChangeType
`protected ChangeSupport` | `AbstractDistribution.getChangeSupport(ChangeType ct)`
`protected ChangeSupport` | `TranslatedDistribution.getChangeSupport(ChangeType ct)`
`protected ChangeSupport` | `AbstractOrderNDistribution.getChangeSupport(ChangeType ct)`

Uses of ChangeType in org.biojava.bio.dp

Fields in org.biojava.bio.dp declared as ChangeType
`static ChangeType` | `EmissionState.ADVANCE` This signals that the advance array has been altered.
`static ChangeType` | `MarkovModel.ARCHITECTURE` Signals that the architecture of the model is changing.
`static ChangeType` | `EmissionState.DISTRIBUTION` This signals that the distribution associate with an EmissionState has been altered.
`static ChangeType` | `MarkovModel.PARAMETER` Signals that one or more parameters have altered.

Methods in org.biojava.bio.dp with parameters of type ChangeType
`protected ChangeSupport` | `SimpleMarkovModel.getChangeSupport(ChangeType ct)`
`protected ChangeSupport` | `SimpleEmissionState.getChangeSupport(ChangeType ct)`

Uses of ChangeType in org.biojava.bio.gui.sequence

Fields in org.biojava.bio.gui.sequence declared as ChangeType
`static ChangeType` | `AbstractBeadRenderer.DEPTH` Constant `DEPTH` indicating a change to the depth of the renderer.
`static ChangeType` | `TickFeatureRenderer.DEPTH`
`static ChangeType` | `AbiTraceRenderer.DEPTH`
`static ChangeType` | `PeptideDigestRenderer.DIGEST`
`static ChangeType` | `AbstractPeptideDigestRenderer.DIGEST`
`static ChangeType` | `AbstractBeadRenderer.DISPLACEMENT` Constant `DISPLACEMENT` indicating a change to the Y-axis displacement of the features.
`static ChangeType` | `FeatureBlockSequenceRenderer.FEATURE_COLLAPSING`
`static ChangeType` | `FeatureBlockSequenceRenderer.FEATURE_RENDERER`
`static ChangeType` | `BasicFeatureRenderer.FILL`
`static ChangeType` | `AbstractBeadRenderer.FILL` Constant `FILL` indicating a change to the fill of the features.
`static ChangeType` | `TickFeatureRenderer.FILL`
`static ChangeType` | `FilteringRenderer.FILTER`
`static ChangeType` | `PairwiseFilteringRenderer.FILTER` Constant `FILTER` indicating a change to the renderer's filter.
`static ChangeType` | `RectangularBeadRenderer.HEIGHTSCALING` Constant `HEIGHTSCALING` indicating a change to the feature height scaling policy.
`static ChangeType` | `AlignmentRenderer.LABEL`
`static ChangeType` | `SimpleLabelRenderer.LABEL`
`static ChangeType` | `FeatureLabelRenderer.LABEL_MAKER`
`static ChangeType` | `SequenceRenderContext.LAYOUT`
`static ChangeType` | `OffsetRulerRenderer.OFFSET`
`static ChangeType` | `BasicFeatureRenderer.OUTLINE`
`static ChangeType` | `AbstractBeadRenderer.OUTLINE` Constant `OUTLINE` indicating a change to the outline paint of the features.
`static ChangeType` | `TickFeatureRenderer.OUTLINE`
`static ChangeType` | `CrosshairRenderer.OUTLINE` Constant `OUTLINE` indicating a change to the crosshair paint.
`static ChangeType` | `PairwiseDiagonalRenderer.OUTLINE` Constant `OUTLINE` indicating a change to the fill of the features.
`static ChangeType` | `PaddingRenderer.PADDING` Event type for when the size of the padding changes.
`static ChangeType` | `EllipticalBeadRenderer.RATIO` Constant `RATIO` indicating a change to the minimum allowed ratio of long axis to short axis of the features.
`static ChangeType` | `FilteringRenderer.RECURSE`
`static ChangeType` | `PairwiseFilteringRenderer.RECURSE` Constant `RECURSE` indicating a change to the renderer's filter recursion flag.
`static ChangeType` | `SequenceRendererWrapper.RENDERER`
`static ChangeType` | `SequencePanel.RENDERER`
`static ChangeType` | `PairwiseSequencePanel.RENDERER` Constant `RENDERER` is a `ChangeType` which indicates a change to the renderer, requiring a layout update.
`static ChangeType` | `SequencePoster.RENDERER` Deprecated.
`static ChangeType` | `TranslatedSequencePanel.RENDERER` Constant `RENDERER` is a `ChangeType` which indicates a change to the renderer, requiring a layout update.
`static ChangeType` | `OverlayRendererWrapper.RENDERER`
`static ChangeType` | `LabelledSequenceRenderer.RENDERER`
`static ChangeType` | `PairwiseFilteringRenderer.RENDERER` Constant `RENDERER` indicating a change to the renderer.
`static ChangeType` | `MultiLineRenderer.RENDERERS`
`static ChangeType` | `StackedFeatureRenderer.RENDERERS`
`static ChangeType` | `PairwiseOverlayRenderer.RENDERERS` Constant `RENDERERS` indicating a change to the renderers handled by the overlay.
`static ChangeType` | `SequenceRenderContext.REPAINT`
`static ChangeType` | `BasicFeatureRenderer.SCOOP`
`static ChangeType` | `BasicFeatureRenderer.SIZE`
`static ChangeType` | `AbstractBeadRenderer.STROKE` Constant `STROKE` indicating a change to the outline stroke of the features.
`static ChangeType` | `OffsetRulerRenderer.TICKS`
`static ChangeType` | `AbiTraceRenderer.TRACE`
`static ChangeType` | `PairwiseSequencePanel.TRANSLATION` Constant `TRANSLATION` is a `ChangeType` which indicates a change to the translation, requiring a paint update.
`static ChangeType` | `TranslatedSequencePanel.TRANSLATION` Constant `TRANSLATION` is a `ChangeType` which indicates a change to the translation, requiring a paint update.
`static ChangeType` | `LabelledSequenceRenderer.VALUES`

Methods in org.biojava.bio.gui.sequence with parameters of type ChangeType
`void` | `SequencePanel.addChangeListener(ChangeListener cl, ChangeType ct)`
`void` | `PairwiseSequencePanel.addChangeListener(ChangeListener cl, ChangeType ct)` `addChangeListener` adds a listener for specific types of change.
`void` | `SequencePoster.addChangeListener(ChangeListener cl, ChangeType ct)` Deprecated.
`void` | `TranslatedSequencePanel.addChangeListener(ChangeListener cl, ChangeType ct)` `addChangeListener` adds a listener for specific types of change.
`protected ChangeSupport` | `SequenceRendererWrapper.getChangeSupport(ChangeType ct)`
`protected ChangeSupport` | `MultiLineRenderer.getChangeSupport(ChangeType ct)`
`protected ChangeSupport` | `SequencePanel.getChangeSupport(ChangeType ct)`
`protected ChangeSupport` | `PaddingRenderer.getChangeSupport(ChangeType ct)`
`protected ChangeSupport` | `FilteringRenderer.getChangeSupport(ChangeType ct)`
`protected ChangeSupport` | `PairwiseSequencePanel.getChangeSupport(ChangeType ct)` `getChangeSupport` lazily instantiates a helper for change listeners.
`protected ChangeSupport` | `PairwiseOverlayRenderer.getChangeSupport(ChangeType ct)`
`protected ChangeSupport` | `FeatureBlockSequenceRenderer.getChangeSupport(ChangeType ct)`
`protected ChangeSupport` | `SequencePoster.getChangeSupport(ChangeType ct)` Deprecated.
`protected ChangeSupport` | `TranslatedSequencePanel.getChangeSupport(ChangeType ct)` `getChangeSupport` lazily instantiates a helper for change listeners.
`protected ChangeSupport` | `OverlayRendererWrapper.getChangeSupport(ChangeType ct)`
`protected ChangeSupport` | `BumpedRenderer.getChangeSupport(ChangeType ct)`
`protected ChangeSupport` | `PairwiseFilteringRenderer.getChangeSupport(ChangeType ct)`
`boolean` | `SequencePanel.isUnchanging(ChangeType ct)`
`boolean` | `PairwiseSequencePanel.isUnchanging(ChangeType ct)`
`boolean` | `SequencePoster.isUnchanging(ChangeType ct)` Deprecated.
`boolean` | `TranslatedSequencePanel.isUnchanging(ChangeType ct)`
`void` | `SequencePanel.removeChangeListener(ChangeListener cl, ChangeType ct)`
`void` | `PairwiseSequencePanel.removeChangeListener(ChangeListener cl, ChangeType ct)` `removeChangeListener` removes a listener.
`void` | `SequencePoster.removeChangeListener(ChangeListener cl, ChangeType ct)` Deprecated.
`void` | `TranslatedSequencePanel.removeChangeListener(ChangeListener cl, ChangeType ct)` `removeChangeListener` removes a listener.

Uses of ChangeType in org.biojava.bio.program.das

Fields in org.biojava.bio.program.das declared as ChangeType
`static ChangeType` | `DASSequence.ANNOTATIONS` Change type which indicates that the set of annotation servers used by this DASSequence has been changed.
`static ChangeType` | `ReferenceServer.ANNOTATOR`
`static ChangeType` | `DAS.SERVERS`

Methods in org.biojava.bio.program.das with parameters of type ChangeType
`void` | `ReferenceServer.addChangeListener(ChangeListener cl, ChangeType ct)`
`protected ChangeSupport` | `ReferenceServer.getChangeSupport(ChangeType ct)`
`protected ChangeSupport` | `DASSequence.getChangeSupport(ChangeType ct)`
`boolean` | `ReferenceServer.isUnchanging(ChangeType ct)`
`void` | `ReferenceServer.removeChangeListener(ChangeListener cl, ChangeType ct)`

Uses of ChangeType in org.biojava.bio.program.homologene

Fields in org.biojava.bio.program.homologene declared as ChangeType
`static ChangeType` | `OrthologueSet.MODIFY`
`static ChangeType` | `OrthoPairSet.MODIFY`

Uses of ChangeType in org.biojava.bio.search

Methods in org.biojava.bio.search with parameters of type ChangeType
`protected ChangeSupport` | `SequenceDBSearchHit.getChangeSupport(ChangeType ct)` Deprecated.
`protected ChangeSupport` | `SimpleSeqSimilaritySearchSubHit.getChangeSupport(ChangeType ct)`
`protected ChangeSupport` | `SequenceDBSearchResult.getChangeSupport(ChangeType ct)` Deprecated.
`protected ChangeSupport` | `SimpleSeqSimilaritySearchResult.getChangeSupport(ChangeType ct)`
`protected ChangeSupport` | `SequenceDBSearchSubHit.getChangeSupport(ChangeType ct)` Deprecated.
`protected ChangeSupport` | `SimpleSeqSimilaritySearchHit.getChangeSupport(ChangeType ct)`

Uses of ChangeType in org.biojava.bio.seq

Fields in org.biojava.bio.seq declared as ChangeType
`static ChangeType` | `FeatureHolder.FEATURES` Signals that features have been added or removed directly within this FeatureHolder.
`static ChangeType` | `Feature.LOCATION` The location of this feature is being altered.
`static ChangeType` | `FeatureHolder.SCHEMA` Signals that the schema of this FeatureHolder has changed.
`static ChangeType` | `Feature.SOURCE` The source of this feature has altered
`static ChangeType` | `Feature.SOURCETERM` The ontological source of this feature has altered
`static ChangeType` | `StrandedFeature.STRAND` The strand of this feature is being altered.
`static ChangeType` | `Feature.TYPE` The type of this feature has altered.
`static ChangeType` | `Feature.TYPETERM` The ontological type of this feature has altered.

Methods in org.biojava.bio.seq with parameters of type ChangeType
`protected ChangeSupport` | `SimpleAssembly.getChangeSupport(ChangeType ct)`
`protected ChangeSupport` | `NewSimpleAssembly.getChangeSupport(ChangeType ct)`
`protected ChangeSupport` | `FeatureTypes.RepositoryImpl.getChangeSupport(ChangeType ct)`
`protected ChangeSupport` | `LazyFeatureHolder.getChangeSupport(ChangeType ct)`

Uses of ChangeType in org.biojava.bio.seq.db

Fields in org.biojava.bio.seq.db declared as ChangeType
`static ChangeType` | `SequenceDBLite.SEQUENCES` Signals that sequences are being added to or remove from the database.

Methods in org.biojava.bio.seq.db with parameters of type ChangeType
`protected ChangeSupport` | `SequenceDBWrapper.getChangeSupport(ChangeType ct)`

Uses of ChangeType in org.biojava.bio.seq.distributed

Fields in org.biojava.bio.seq.distributed declared as ChangeType
`static ChangeType` | `DistributedSequenceDB.DATASOURCE`
`static ChangeType` | `DistributedSequenceDB.DATASOURCE_SELECTION`

Uses of ChangeType in org.biojava.bio.seq.homol

Fields in org.biojava.bio.seq.homol declared as ChangeType
`static ChangeType` | `Homology.ALIGNMENT` Signals that the alignment describing the homologous sequences has changed.
`static ChangeType` | `SimilarityPairFeature.SIBLING` The sibling of this feature has altered.

Uses of ChangeType in org.biojava.bio.seq.impl

Methods in org.biojava.bio.seq.impl with parameters of type ChangeType
`void` | `SubSequence.addChangeListener(ChangeListener cl, ChangeType ct)`
`void` | `LazyFilterFeatureHolder.addChangeListener(ChangeListener cl, ChangeType ct)`
`protected ChangeSupport` | `SimpleSequence.getChangeSupport(ChangeType ct)`
`protected ChangeSupport` | `SimpleFeature.getChangeSupport(ChangeType ct)`
`boolean` | `SubSequence.isUnchanging(ChangeType ct)`
`boolean` | `LazyFilterFeatureHolder.isUnchanging(ChangeType ct)`
`void` | `SubSequence.removeChangeListener(ChangeListener cl, ChangeType ct)`
`void` | `LazyFilterFeatureHolder.removeChangeListener(ChangeListener cl, ChangeType ct)`

Uses of ChangeType in org.biojava.bio.seq.projection

Methods in org.biojava.bio.seq.projection with parameters of type ChangeType
`void` | `ProjectedFeature.addChangeListener(ChangeListener cl, ChangeType ct)`
`void` | `ReparentContext.addChangeListener(Feature f, ChangeListener cl, ChangeType ct)`
`void` | `ProjectionContext.addChangeListener(Feature projFeat, ChangeListener cl, ChangeType ct)` Add a ChangeListener to a projected feature.
`boolean` | `ProjectedFeature.isUnchanging(ChangeType ct)`
`void` | `ProjectedFeature.removeChangeListener(ChangeListener cl, ChangeType ct)`
`void` | `ReparentContext.removeChangeListener(Feature f, ChangeListener cl, ChangeType ct)`
`void` | `ProjectionContext.removeChangeListener(Feature projFeat, ChangeListener cl, ChangeType ct)` Remove a ChangeListener from a projected feature.

Uses of ChangeType in org.biojava.bio.symbol

Fields in org.biojava.bio.symbol declared as ChangeType
`static ChangeType` | `Alignment.CONTENT` Signals that SymbolLists will be added to or removed from an alignment.
`static ChangeType` | `SymbolList.EDIT` Signals that the SymbolList is being edited.
`static ChangeType` | `AlphabetIndex.INDEX` Indicates that the index is changing, probably due to the underlying alphabet changing.
`static ChangeType` | `Alphabet.PARSERS` This signals that the available parsers have changed.
`static ChangeType` | `Alphabet.SYMBOLS` This ChangeType indicates that some symbols have been added or removed from the alphabet.

Methods in org.biojava.bio.symbol with parameters of type ChangeType
`protected ChangeSupport` | `AbstractSymbol.getChangeSupport(ChangeType changeType)`
`protected ChangeSupport` | `SimpleAlphabet.getChangeSupport(ChangeType ct)`

Uses of ChangeType in org.biojava.bio.taxa

Fields in org.biojava.bio.taxa declared as ChangeType
`static ChangeType` | `Taxon.CHANGE_COMMON_NAME` Deprecated. Change type to indicate that the common name of this Taxon is changing.
`static ChangeType` | `Taxon.CHANGE_SCIENTIFIC_NAME` Deprecated. Change type to indicate that the scientific name of this Taxon is changing.

Methods in org.biojava.bio.taxa with parameters of type ChangeType
`protected ChangeSupport` | `AbstractTaxon.getChangeSupport(ChangeType ct)` Deprecated.

Uses of ChangeType in org.biojava.ontology

Fields in org.biojava.ontology declared as ChangeType
`static ChangeType` | `Term.ONTOLOGY` ChangeType which indicates that this term's ontology has been altered
`static ChangeType` | `Ontology.TERM`
`static ChangeType` | `Ontology.TRIPLE`

Methods in org.biojava.ontology with parameters of type ChangeType
`ChangeSupport` | `AbstractTerm.getChangeSupport(ChangeType ct)`
`ChangeSupport` | `OntologyTerm.Impl.getChangeSupport(ChangeType ct)`

Uses of ChangeType in org.biojava.utils

Fields in org.biojava.utils declared as ChangeType
`ChangeType` | `IndexedChangeHub.ListenerMemento.type`
`static ChangeType` | `ChangeType.UNKNOWN` Constant ChangeType field which indicates that a change has occured which can't otherwise be represented.

Methods in org.biojava.utils that return ChangeType
`ChangeType` | `ChangeEvent.getType()` Find the type of this event.
`ChangeType` | `ChangeForwarder.Retyper.getType()`

Methods in org.biojava.utils with parameters of type ChangeType
`void` | `Unchangeable.addChangeListener(ChangeListener cl, ChangeType ct)`
`void` | `AbstractChangeable.addChangeListener(ChangeListener cl, ChangeType ct)`
`void` | `ChangeSupport.addChangeListener(ChangeListener cl, ChangeType ct)` Add a listener that will be informed of changes of a given type (and it's subtypes)
`void` | `Changeable.addChangeListener(ChangeListener cl, ChangeType ct)` Add a listener that will be informed of changes of a given type.
`void` | `Unchangeable.addForwarder(ChangeForwarder cf, ChangeType ct)`
`void` | `ChangeHub.addListener(Object key, ChangeListener listener, ChangeType ct)` add a ChangeListener associated with given key.
`void` | `IndexedChangeHub.addListener(Object key, ChangeListener listener, ChangeType ct)`
`protected ChangeSupport` | `AbstractChangeable.getChangeSupport(ChangeType ct)` Called to retrieve the ChangeSupport for this object.
`Set` | `Unchangeable.getForwarders(ChangeType ct)`
`Set` | `Unchangeable.getListeners(ChangeType ct)`
`protected boolean` | `AbstractChangeable.hasListeners(ChangeType ct)` Discover if we have listeners registered for a particular change type.
`boolean` | `ChangeSupport.hasListeners(ChangeType ct)` Return true if we have listeners registered for a particular change type.
`boolean` | `ChangeType.isMatchingType(ChangeType ct)` Return `true` iff `ct` is equal to this type or any of it's supertypes (including ChangeType.UNKNOWN).
`boolean` | `Unchangeable.isUnchanging(ChangeType ct)`
`boolean` | `AbstractChangeable.isUnchanging(ChangeType ct)`
`boolean` | `ChangeSupport.isUnchanging(ChangeType ct)`
`boolean` | `Changeable.isUnchanging(ChangeType ct)` A particular ChangeType can never be raised by this Changeable.
`void` | `Unchangeable.removeChangeListener(ChangeListener cl, ChangeType ct)`
`void` | `AbstractChangeable.removeChangeListener(ChangeListener cl, ChangeType ct)`
`void` | `ChangeSupport.removeChangeListener(ChangeListener cl, ChangeType ct)` Remove a listener that was interested in a specific types of changes.
`void` | `Changeable.removeChangeListener(ChangeListener cl, ChangeType ct)` Remove a listener that was interested in a specific types of changes.
`void` | `Unchangeable.removeForwarder(ChangeForwarder cf, ChangeType ct)`
`void` | `ChangeHub.removeListener(Object key, ChangeListener listener, ChangeType ct)` remove a ChangeListener associated with given key.
`void` | `IndexedChangeHub.removeListener(Object key, ChangeListener listener, ChangeType ct)`

Constructors in org.biojava.utils with parameters of type ChangeType
`ChangeEvent(Object source, ChangeType type)` Construct a ChangeEvent with no change details.
`ChangeEvent(Object source, ChangeType type, Object change)` Construct a ChangeEvent specifying a new value for a property, or an object to be added to a collection.
`ChangeEvent(Object source, ChangeType type, Object change, Object previous)` Construct a ChangeEvent specifying a new value for a property, and giving the previous value.
`ChangeEvent(Object source, ChangeType type, Object change, Object previous, ChangeEvent chain)` Construct a ChangeEvent to be fired because another ChangeEvent has been received from a property object.
`ChangeForwarder.Retyper(Object source, ChangeSupport changeSupport, ChangeType type)` Create a new Retyper for forwarding events.
`ChangeType(String name, Class clazz, String fname, ChangeType superType)` Construct a new ChangeType with supertype UNKNOWN
`ChangeType(String name, Field ourField, ChangeType superType)` Construct a new ChangeType.
`ChangeType(String name, String className, String fieldName, ChangeType superType)`
`IndexedChangeHub.ListenerMemento(ChangeType type, Reference listener)`

Uses of ChangeType in org.biojava.utils.cache

Constructors in org.biojava.utils.cache with parameters of type ChangeType
`ChangeableCache(ChangeType ct)`

Uses of ChangeType in org.biojavax

Fields in org.biojavax declared as ChangeType
`static ChangeType` | `Namespace.ACRONYM`
`static ChangeType` | `Namespace.AUTHORITY`
`static ChangeType` | `DocRef.CROSSREF`
`static ChangeType` | `Namespace.DESCRIPTION`
`static ChangeType` | `Namespace.NAME`
`static ChangeType` | `Note.RANK`
`static ChangeType` | `DocRef.REMARK`
`static ChangeType` | `Note.TERM`
`static ChangeType` | `Namespace.URI`
`static ChangeType` | `Note.VALUE`

Uses of ChangeType in org.biojavax.bio

Fields in org.biojavax.bio declared as ChangeType
`static ChangeType` | `BioEntry.COMMENT`
`static ChangeType` | `BioEntry.DESCRIPTION`
`static ChangeType` | `BioEntry.DIVISION`
`static ChangeType` | `BioEntry.IDENTIFIER`
`static ChangeType` | `BioEntryRelationship.RANK`
`static ChangeType` | `BioEntry.RANKEDCROSSREF`
`static ChangeType` | `BioEntry.RANKEDDOCREF`
`static ChangeType` | `BioEntry.RELATIONS`
`static ChangeType` | `BioEntry.SEQVERSION`
`static ChangeType` | `BioEntry.TAXON`

Uses of ChangeType in org.biojavax.bio.db

Fields in org.biojavax.bio.db declared as ChangeType
`static ChangeType` | `BioEntryDBLite.BIOENTRYS` Signals that sequences are being added to or remove from the database.

Uses of ChangeType in org.biojavax.bio.seq

Fields in org.biojavax.bio.seq declared as ChangeType
`static ChangeType` | `RichSequence.CIRCULAR`
`static ChangeType` | `RichLocation.CIRCULAR`
`static ChangeType` | `RichFeature.CROSSREF`
`static ChangeType` | `RichLocation.FEATURE`
`static ChangeType` | `RichFeature.LOCATION`
`static ChangeType` | `RichFeature.NAME`
`static ChangeType` | `RichLocation.NOTE`
`static ChangeType` | `RichFeature.PARENT`
`static ChangeType` | `RichFeature.RANK`
`static ChangeType` | `RichFeatureRelationship.RANK`
`static ChangeType` | `RichLocation.RANK`
`static ChangeType` | `RichFeature.RELATION`
`static ChangeType` | `RichFeature.SOURCETERM`
`static ChangeType` | `RichSequence.SYMLISTVERSION`
`static ChangeType` | `RichLocation.TERM`
`static ChangeType` | `RichFeature.TYPETERM`

Methods in org.biojavax.bio.seq with parameters of type ChangeType
`void` | `InfinitelyAmbiguousSymbolList.addChangeListener(ChangeListener cl, ChangeType ct)` Add a listener that will be informed of changes of a given type. IGNORED
`boolean` | `InfinitelyAmbiguousSymbolList.isUnchanging(ChangeType ct)` A particular ChangeType can never be raised by this Changeable. ALWAYS RETURNS TRUE
`void` | `InfinitelyAmbiguousSymbolList.removeChangeListener(ChangeListener cl, ChangeType ct)` Remove a listener that was interested in a specific types of changes. IGNORED

Uses of ChangeType in org.biojavax.bio.taxa

Fields in org.biojavax.bio.taxa declared as ChangeType
`static ChangeType` | `NCBITaxon.GENETICCODE`
`static ChangeType` | `NCBITaxon.HIDDEN`
`static ChangeType` | `NCBITaxon.LEFTVALUE`
`static ChangeType` | `NCBITaxon.MITOGENETICCODE`
`static ChangeType` | `NCBITaxon.NAMES`
`static ChangeType` | `NCBITaxon.NODERANK`
`static ChangeType` | `NCBITaxon.PARENT`
`static ChangeType` | `NCBITaxon.RIGHTVALUE`

Uses of ChangeType in org.biojavax.ga

Fields in org.biojavax.ga declared as ChangeType
`static ChangeType` | `Organism.CHROMOSOMES`
`static ChangeType` | `GeneticAlgorithm.CROSS_OVER_FUNCTION`
`static ChangeType` | `GeneticAlgorithm.FUNCTION`
`static ChangeType` | `GeneticAlgorithm.MUTATION_FUNCTION`
`static ChangeType` | `Organism.NAME`
`static ChangeType` | `Population.NAME`
`static ChangeType` | `Population.ORGANISMS`
`static ChangeType` | `GeneticAlgorithm.POPULATION`
`static ChangeType` | `GeneticAlgorithm.SELECTION_FUNCTION`

Uses of ChangeType in org.biojavax.ga.functions

Fields in org.biojavax.ga.functions declared as ChangeType
`static ChangeType` | `CrossOverFunction.CROSS_PROB`
`static ChangeType` | `SelectionFunction.FITNESS_FUNCTION`
`static ChangeType` | `CrossOverFunction.MAX_CROSSES`
`static ChangeType` | `MutationFunction.MUTATION_PROBS`
`static ChangeType` | `MutationFunction.MUTATION_SPECTRUM`

Methods in org.biojavax.ga.functions with parameters of type ChangeType
`void` | `CrossOverFunction.NoCross.addChangeListener(ChangeListener cl, ChangeType ct)`
`void` | `MutationFunction.NoMutation.addChangeListener(ChangeListener cl, ChangeType ct)`
`boolean` | `CrossOverFunction.NoCross.isUnchanging(ChangeType t)`
`boolean` | `MutationFunction.NoMutation.isUnchanging(ChangeType ct)`
`void` | `CrossOverFunction.NoCross.removeChangeListener(ChangeListener cl, ChangeType ct)`
`void` | `MutationFunction.NoMutation.removeChangeListener(ChangeListener cl, ChangeType ct)`

Uses of ChangeType in org.biojavax.ontology

Fields in org.biojavax.ontology declared as ChangeType
`static ChangeType` | `ComparableTerm.DESCRIPTION`
`static ChangeType` | `ComparableOntology.DESCRIPTION`
`static ChangeType` | `ComparableTriple.DESCRIPTOR`
`static ChangeType` | `ComparableTerm.IDENTIFIER`
`static ChangeType` | `ComparableTerm.OBSOLETE`
`static ChangeType` | `ComparableTerm.RANKEDCROSSREF`
`static ChangeType` | `ComparableOntology.TERM`
`static ChangeType` | `ComparableOntology.TRIPLE`

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