org.biojava.bio.dp.onehead (BioJava-1.5-beta API)
Keywords: org.biojava.bio.dp.onehead package

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## Package org.biojava.bio.dp.onehead

Interface Summary
DPCursor | Encapsulates the dynamic programmming matrix, and the context within algorithms work.

Class Summary
SingleDP | An implementation of DP that aligns a single sequence against a single model.
SingleDPMatrix | The dynamic programming matrix for a single sequence.
SmallCursor | Constant-memory implementation of single-head DP cursor.

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