org.biojava.bio.structure.io (BioJava-1.5-beta API)
Keywords: org.biojava.bio.structure.io package

Overview | Package | Class | Use | Tree | Deprecated | Index | Help
PREV PACKAGE NEXT PACKAGE | FRAMES NO FRAMES

## Package org.biojava.bio.structure.io

Interface Summary
StructureIO | Defines the interface how to access Structure (- PDB file) input,output readers, writers.
StructureIOFile | interface StructureIOFile extends the StructureIO interface and adds a few File specific methods.

Class Summary
DASStructureClient | A DAS client that connects to a DAS structure service and returns a Biojava structure class.
FileConvert | Methods to convert a structure object into different file formats.
PDBFileParser | A PDB file parser.
PDBFileReader | A PDB file parser.
PDBMSDReader | retreive a structure from an installation of the MSD - search database ( http://www.ebi.ac.uk/msd/index.html , http://www.ebi.ac.uk/msd-srv/docs/dbdoc/ )
PDBSRSReader | reads a PDB file from a local SRS installation using getz Actually is the same as PDBFileReader, but instead of reading from a file stream, reads from a buffered stream.

Exception Summary
PDBParseException | An exception during the parsing of a PDB file.

Overview | Package | Class | Use | Tree | Deprecated | Index | Help
PREV PACKAGE NEXT PACKAGE | FRAMES NO FRAMES