org.biojava.bio.structure.align.pairwise (BioJava-1.5-beta API)
Keywords: org.biojava.bio.structure.align.pairwise package

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## Package org.biojava.bio.structure.align.pairwise

Interface Summary
Alignable |

Class Summary
AligNPE |
AltAligComparator |
AlternativeAlignment | Implements a class which handles one possible (alternative) solution.
FragmentJoiner | Joins the initial Fragments together to larger Fragments
FragmentPair | a pair of fragments of two protein structures
Gotoh | a class to perform Gotoh algorithm
StrCompAlignment |

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