TBLASTN 2.0a19MP-WashU [05-Feb-1998] [Build sol2.5-ultra 01:47:30 05-Feb-1998]

Reference:  Gish, Warren (1994-1997).  unpublished.
Altschul, Stephen F., Warren Gish, Webb Miller, Eugene W. Myers, and David J.
Lipman (1990).  Basic local alignment search tool.  J. Mol. Biol. 215:403-10.

Notice:  statistical significance is estimated under the assumption that the
equivalent of one complete reading frame of the database codes for protein and
that significant alignments will involve only coding reading frames.

Query=  sp|P09429|HMG1_HUMAN HIGH MOBILITY GROUP PROTEIN HMG1 (HMG-1) - Homo
    sapiens (Human).
        (214 letters)

Database:  embl
           442,729 sequences; 675,252,082 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                     Reading  High  Probability
Sequences producing High-scoring Segment Pairs:        Frame Score  P(N)      N

X12597               Human mRNA for high mobility grou... +2  1144  4.8e-115  1
X12796               Bovine mRNA for high mobility gro... +2  1140  1.0e-114  1
Z11997               M.musculus mRNA for non-histone c... +1  1137  1.2e-114  1
M21683;M21684        Pig nonhistone protein HMG1 mRNA,... +3  1135  2.0e-114  1
U00431               Mus musculus HMG-1 mRNA, complete... +2  1137  2.0e-114  1
M64986               Rat amphoterin mRNA, complete cds.   +3  1137  2.2e-114  1
M63852               Rat high mobility group 1 protein... +2  1137  2.9e-114  1
Y00463               Rat mRNA for high mobility group ... +1  1137  3.2e-114  1
L38477               Mus musculus (clone Clebp-1) high... +2  1130  1.2e-113  1
D63874               Human mRNA for HMG-1, complete cds.  +2  1124  5.3e-113  1
L08048               Human non-histone chromosomal pro... +1  1119  1.2e-112  1
U51677               Human non-histone chromatin prote... +2   311  1.8e-107  4
X80457               M.musculus HMG1 gene                 +2   311  1.0e-105  4
Z95115               Human DNA sequence from BAC 445C9... +1  1047  8.8e-104  1
U21933               Xenopus laevis high mobility grou... +3   979  9.5e-98   1
Y00365               Chinese hamster HMG-1 gene for hi... +1   948  1.4e-94   1
X62534               H.sapiens HMG-2 mRNA                 +2   924  7.6e-92   1
J02895               Pig non-histone chromosomal prote... +3   923  1.1e-91   1
D84418               Rat mRNA for chromosomal protein ... +3   914  1.1e-90   1
Z46757               M.musculus mRNA for high mobility... +1   914  1.3e-90   1
M83235               Gallus gallus non-histone chromos... +2   910  2.8e-90   1
M80574               Gallus domesticus high-mobility g... +1   900  3.5e-89   1
D30765               Xenopus laevis mRNA for HMG-X pro... +3   871  3.8e-86   1
U31513               Ambystoma mexicanum high mobility... +1   868  8.1e-86   1
M83665               Human high mobility group 2 prote... +2   265  2.3e-82   4
X98857               L.fluviatilis mRNA for HMG protein   +1   821  4.9e-81   1
X02666               Trout mRNA for high mobility grou... +1   824  5.5e-81   1
X63463               G.gallus HMG2a mRNA                  +1   814  4.2e-80   1
X67668               M.musculus mRNA for high mobility... +1   810  1.4e-79   1
AF022465             Mus musculus high mobility group ... +1   801  7.1e-79   1
Z17240               Homo sapiens for mRNA encoding HM... +1   800  1.3e-78   1
D14314               Chicken mRNA for HMG-1, complete ... +3   796  4.9e-78   1
Y10043               Homo sapiens mRNA for high mobili... +3   784  4.1e-77   1
L32859               Rainbow trout HMG-1 gene exons 2-... +3   257  1.1e-75   4
AF009343             Mus musculus HMG-like protein (Tr... +1   699  1.5e-71   2
D14718               Human chromosomal protein HMG1 re... +3   666  1.0e-64   1
U13881               Drosophila melanogaster DNA-bindi... +1   540  2.6e-51   1
X81456               D.melanogaster mRNA for an open r... +2   539  1.4e-50   1
L32954               Rainbow trout HMG-T2 gene exons 1... +3   227  3.0e-50   3
AF003626             Homo sapiens cosmids IM0525, LC12... +1   245  1.2e-49   3
M26110               Bovine high-mobility-group protei... +1   495  3.6e-46   1
L06453               Strongylocentrotus purpuratus (cl... +2   483  3.0e-45   1
X89811               D.melanogaster DNA for SSRP2 gene    +1   201  9.4e-42   4
Z93931               Human DNA sequence from PAC 438G1... -3   264  3.0e-33   2
X80466               M.musculus HMG1-R-227 gene           +1   331  3.7e-28   1
U22831               Caenorhabditis elegans cosmid F47... +3   203  1.2e-27   4
X66077               Z.mays MNB1b mRNA for DNA-binding... +3   308  2.0e-26   1
X58282               Maize mRNA for a high mobility gr... +1   308  2.1e-26   1
X80462               M.musculus HMG1-R-154 gene           +1   307  1.3e-25   1
AC002526             Human PAC clone DJ0558L21 from Xq... +3   250  1.3e-24   2
Z11540               T.aestivum mRNA for high mobility... +2   289  2.1e-24   1
Y14071               Arabidopsis thaliana mRNA for HMG... +1   281  1.6e-23   1
Z71255               S.cerevisiae chromosome XVI 16553... -3   206  4.7e-23   2
U39747               Ipomoea nil high mobility group p... +3   269  3.0e-22   1
Z50799               H.vulgare mRNA for HMG1/2-like pr... +2   263  1.1e-21   1
AB000637             Canavalia gladiata mRNA for HMG-1... +2   263  1.5e-21   1
L12169               Japanese morning glory high mobil... +3   261  2.5e-21   1
Z21703               V.faba mRNA for HMG box.             +1   260  2.8e-21   1
AF002226             Nicotiana tabacum DNA-binding pro... +2   260  3.0e-21   1
X80465               M.musculus HMG1-R-168 gene           +2   219  1.8e-20   2
Y09482               A.thaliana mRNA for HMG 1 protein    +1   252  2.2e-20   1
Y14073               Arabidopsis thaliana mRNA for HMG... +3   252  2.2e-20   1
Y14072               Arabidopsis thaliana mRNA for HMG... +1   251  3.0e-20   1
L42571               Cricetulus griseus ribosomal tran... +1   162  6.4e-20   2
L42570               Cricetulus griseus ribosomal tran... +1   162  7.0e-20   2
D14315               delta-crystallin enhancer binding... +3   248  9.9e-20   1
X76774               P.sativum mRNA for HMG1 protein      +3   245  1.1e-19   1
L28094               Barley mRNA sequence.                +3   244  1.2e-19   1
I14731               Sequence 10 from patent US 5451670.  -2   249  1.8e-19   1
AJ002391             Solanum tuberosum mRNA for high m... +3   241  3.2e-19   1
S50213               HMG1-related DNA-binding protein ... +2   247  3.3e-19   1
M61725               Rat transcription factor UBF2 mRNA.  +3   190  3.8e-19   2
M61726               Rat transcription factor UBF1 mRNA.  +3   190  4.1e-19   2
X80467               M.musculus HMG1-R-87 gene            +2   139  6.2e-19   2
X60831               Mouse ubf gene for transcription ... +3   197  6.8e-19   2
X56687               H.sapiens mRNA for autoantigen NO... +3   198  1.3e-18   2
X53390               Human mRNA for upstream binding f... +1   198  1.8e-18   2
X53461;X53260        Human mRNA for upstream binding f... +1   198  1.8e-18   2
U84139               Bos taurus structure-specific rec... +1   238  2.3e-18   1
X58245               Soybean mRNA for HMG-1 like protein  +1   231  3.5e-18   1
X80460               M.musculus HMG1-R-135 gene           +1   137  4.3e-18   2
L08815               Chicken CIIDBP (homologous to hum... +3   236  4.3e-18   1
X71139               D.melanogaster HMG-Z mRNA            +1   230  5.8e-18   1
L08814               Rat CIIDBP (homologous to human S... +1   234  7.0e-18   1
I66609               Sequence 8 from patent US 5670621.   +1   232  1.1e-17   1
Y08297               Z.mays mRNA for HMGc1 protein        +2   226  1.2e-17   1
M86737               Human high mobility group box (SS... +2   232  1.4e-17   1
I66608               Sequence 6 from patent US 5670621.   +2   232  1.4e-17   1
Y08807               Z.mays mRNA for HMG protein          +1   222  3.3e-17   1
Y08298               Z.mays mRNA for HMGc2 protein        +1   217  9.9e-17   1
M77023               Drosophila melanogaster high mobi... +3   216  1.1e-16   1
I66610               Sequence 9 from patent US 5670621.   +1   220  1.5e-16   1
X71138               D.melanogaster HMG-D mRNA            +1   216  3.2e-16   1
M93253               Chironomus tentans high mobility ... +2   211  6.9e-16   1
M74017               T.brucei rhodesiense HMG1-like pr... +1   214  9.9e-16   1
X80459               M.musculus HMG1-R-177 gene           +1   119  1.1e-15   2
X15317               Yeast NHP6A gene for nonhistone p... +1   206  2.0e-15   1
Y14074               Arabidopsis thaliana mRNA for HMG... +1   205  2.2e-15   1
X57201               X.laevis xUBFbeta2 mRNA for upstr... +2   148  2.6e-15   2
X97906               V.faba mRNA for transcription fac... +2   209  3.6e-15   1
M95912               Saccharomyces cerevisiae N-acetyl... -1   206  6.3e-15   1
X15318               Yeast NHPB gene for nonhistone pr... +1   198  9.4e-15   1
Z49219;U00094        S.cerevisiae chromosome XVI cosmi... -3   206  1.2e-14   1
X59863               X.laevis xUBFalpha1 mRNA for upst... +3   181  1.8e-14   2
U00049               Caenorhabditis elegans cosmid C18... +3   203  2.4e-14   1
X68408               D.melanogaster SSRP1 mRNA            +3   201  2.7e-14   1
I66611               Sequence 10 from patent US 5670621.  +3   201  2.7e-14   1
X57561               X.laevis xUBF mRNA for RNA polyme... +2   180  3.1e-14   2
Z35959;Y13134        S.cerevisiae chromosome II readin... -3   198  3.5e-14   1
L08825               Drosophila melanogaster single-st... +1   196  9.3e-14   1
U80736               Homo sapiens CAGF9 mRNA, partial ... +1   184  1.7e-12   1
X80461               M.musculus HMG1-R-145 gene           +1   130  2.1e-12   2
L31630               Plasmodium falciparum (clone: D10... +1   171  1.6e-11   1
AF000195             Caenorhabditis elegans cosmid C32... -1   134  7.6e-11   2
M73820               Mouse sex-limited protein (SlpA) ... +2   159  1.5e-10   2
M64933               Mouse nonfunctional sex-limited p... +1   162  1.5e-10   2
M93254               Chironomus tentans high mobility ... +1   160  1.9e-10   1
X80464               M.musculus HMG1-R-161 gene           +1   160  4.6e-10   1
U01348               Rattus norvegicus clone B-0/7 ary... -1   159  6.1e-10   1
U01343               Rattus norvegicus clone A-1 aryla... -1   159  6.2e-10   1
U01345               Rattus norvegicus clone A-3 aryla... -2   155  6.4e-10   1
U10401               Caenorhabditis elegans cosmid T20B12 -1   128  9.6e-10   2
Z48008;Z71256        S.cerevisiae chromosome IV cosmid... -2   159  1.1e-09   1
X53858               Rat TTF-1 mRNA for thyroid nuclea... -1   150  3.3e-09   2
J03998               P.falciparum glutamic acid-rich p... +3   156  3.5e-09   1
M81360               Babesia bovis non-histone protein... +3   147  5.4e-09   1
D86076               Xenopus laevis oocyte mRNA for DN... +2   155  5.5e-09   1
D83650               Xenopus laevis mRNA for XLS13A pr... +2   155  5.5e-09   1
Y14075               Arabidopsis thaliana mRNA for HMG... +1   144  8.3e-09   1
Z29356               Gallus domesticus of h71t7 gene e... +3   147  9.2e-09   1
E08995               DNA encoding a protein involved i... +1   154  1.2e-08   1
L22300               Chilo iridescent virus type 6 zin... +3   143  1.3e-08   2
X53025               P.falciparum DNA for erythrocyte ... +2   145  1.4e-08   1
U05269               Brugia malayi high mobility group... +2   145  1.5e-08   1
M55020;M37081        Rat nucleolin gene.                  +1   154  1.7e-08   1
U53810               Toxoplasma gondii GAA trinucleoti... +2   151  1.7e-08   1
X73481               D.hydei Dhmst101 (2) gene            +1   154  1.7e-08   1
U65487;L21182        Human ribosomal RNA upstream bind... +3   102  1.7e-08   3
M63424               Tetrahymena thermophila high-mobi... +1   147  3.7e-08   1
M17440;J05095        Mouse MHC (H-2) S region compleme... -1   152  4.3e-08   1
U83985               Rattus norvegicus alpha 1B adrene... +2   137  4.8e-08   1
M17284               Mouse transcriptional control ele... +1   138  6.2e-08   1
S72345               RI beta =cAMP-dependent protein k... -3   147  6.2e-08   2
AJ223169             Saccharomyces cerevisiae mRNA for... +1   148  9.7e-08   1
M73753               Saccharomyces cerevisiae mitochon... +2   148  1.1e-07   1
X80463               M.musculus HMG1-R-159 gene           +3   137  1.3e-07   1
AB006705             Arabidopsis thaliana genomic DNA,... +3   149  1.7e-07   2
Z48952;Z71257        S.cerevisiae chromosome XIII cosm... +3   148  2.1e-07   1
D13491               A.thaliana mRNA for high mobility... +2   147  2.1e-07   1
AC004155             Mus musculus DNA from BAC 10818 c... +3   148  2.2e-07   1
U05314               Saccharomyces cerevisiae nuclear ... +3   147  2.3e-07   1
D37935               Yeast DNA for RNA binding protein... +1   147  2.3e-07   1
M81784               Rattus norvegicus K+ channel mRNA... +3   146  3.4e-07   1
A12522               Ag169 clone                          -1   143  3.5e-07   1
X76589               H.sapiens DNA 3' flanking simple ... +1   132  3.7e-07   1
E10125               DNA encoding an immunogenicity pr... +1   145  4.2e-07   1
M10296               Mouse DNA with homology to EBV IR... +3   129  4.4e-07   1
AL009197             S.pombe chromosome I cosmid c10F6.   -3   142  4.4e-07   2
Z50100               H.vulgare GAA-satellite DNA          +2   130  4.5e-07   1
L16900               Yeast intrastrand crosslink recog... +3   145  4.8e-07   1
I66612               Sequence 12 from patent US 5670621.  +1   145  4.9e-07   1
E10126               DNA encoding an immunogenicity pr... +1   145  4.9e-07   1
Z28032;Y13137        S.cerevisiae chromosome XI readin... -1   145  4.9e-07   1
U53154               Caenorhabditis elegans cosmid C33G8. +3   144  5.3e-07   2
X71622               S.cerevisiae DNA sequence for Kaz... -1   145  5.6e-07   1
M15825               Chinese hamster nucleolin (C23) m... +1   144  5.9e-07   1
L22660               Rat polymeric immunoglobulin rece... +1   129  6.3e-07   1
AF040950             Mus musculus killer cell inhibito... -3   142  6.3e-07   1
U00762               Rattus norvegicus clone1 polymeri... +1   129  6.4e-07   1
Y15491               Pongo pygmaeus gene encoding fert... +1   144  6.5e-07   1
U00763               Rattus norvegicus clone2 polymeri... +3   129  6.8e-07   1
U01145               Rattus norvegicus clone 923 polym... +3   127  6.8e-07   1
X72957               X.laevis mRNA for nucleolin          +1   134  6.9e-07   2
AC004073             Human Chromosome X, complete sequ... +2   144  8.0e-07   1
U93872               Kaposi's sarcoma-associated herpe... -3   144  8.0e-07   1
X54504               D. melanogaster mRNA for troponin... +2   142  8.8e-07   1
L13025               Rattus norvegicus (clone 2) mRNA ... +3   129  9.7e-07   1
M24398               Human parathymosin mRNA, complete... +1   141  9.8e-07   1
AB002381             Human mRNA for KIAA0383 gene, par... +2   143  1.0e-06   1
U09820               Human helicase II (RAD54L) mRNA, ... +3   143  1.0e-06   1
M10668               Mouse DNA with homology to EBV IR... +2   126  1.0e-06   1
U72938               Human putative DNA dependent ATPa... +2   143  1.1e-06   1
U72937               Human putative DNA dependent ATPa... +2   143  1.1e-06   1
U75653               Human zinc finger helicase (Znf-H... +1   143  1.1e-06   1
U72936               Human putative DNA dependent ATPa... +1   143  1.1e-06   1
U12534               Gallus gallus Sox11 transcription... +1   124  1.1e-06   2
M60858;J05584        Human nucleolin gene, complete cds.  +2   143  1.1e-06   1
AF000299             Caenorhabditis elegans cosmid E03... +1   143  1.1e-06   1
X78993               S.cerevisiae genomic DNA 70kb reg... -3   143  1.1e-06   1
Z73514;U00094        S.cerevisiae chromosome XVI readi... -3   142  1.2e-06   1
L40039               Gallus gallus GAA microsatellite ... +1   126  1.2e-06   1
AJ000496             Rattus norvegicus mRNA for cyclic... +2   142  1.3e-06   1
X17093               Human HLA-F gene for human leukoc... +2   142  1.3e-06   1
J05138               Rabbit calcium binding protein (c... +1   141  1.4e-06   1
M32294               Human Ro ribonucleoprotein autoan... +1   141  1.4e-06   1
I09500               Sequence 4 from patent WO 8909273.   +1   141  1.4e-06   1
M84739               Human autoantigen calreticulin mR... +1   141  1.4e-06   1
Y13901               Homo sapiens FGFR-4 gene             -2   142  1.5e-06   1
M57718;M33937        Rat cytochrome P-450 IV A1 (CYP4A... -3   142  1.5e-06   1
X96770               S.cerevisiae chromosome XVI, left... -1   142  1.5e-06   1
AF005370             Alcelaphine herpesvirus 1 L-DNA, ... -2   142  1.5e-06   1
L34363               Human X-linked nuclear protein (X... +3   141  1.8e-06   1
M18837               Mouse MHC class I Q4 beta-2-micro... -1   141  1.8e-06   1
X63507;S42523;S42569 M.musculus HOX-3.5 gene              -1   141  1.9e-06   1
U88309               Caenorhabditis elegans cosmid T23B3. -2   141  2.0e-06   1
AF034569             Mus musculus anticoagulant protei... +2   137  2.0e-06   2
X64743;S37462        G.gallus RSFR mRNA                   +3   137  2.1e-06   1
M14483               Human prothymosin alpha mRNA, com... +1   123  2.2e-06   1
L81783               Homo sapiens (subclone 9_d11 from... +3   140  2.3e-06   1
U40719               Rattus norvegicus S-adenosylmethi... +3   140  2.4e-06   1
L21693               Human (clone pHG2) prothymosin al... +1   123  3.2e-06   1
M14794               Human prothymosin alpha mRNA, lym... +3   123  3.2e-06   1
D78176               Mouse DNA for primary transcript ... +2   138  3.8e-06   1
X79327               R.norvegicus (Sprague Dawley) cal... +2   137  4.4e-06   1
L05517               Plasmodium chabaudi DNA sequence,... +1   137  4.5e-06   1
X07699               Mouse nucleolin gene                 +1   138  4.8e-06   1
D78308               Rat mRNA for calreticulin, comple... +1   137  4.8e-06   1
M92988               Mouse calregulin (ERp60) mRNA, co... +3   137  4.8e-06   1
X53363               Rat mRNA for calreticulin            +3   137  4.8e-06   1
X14926               Mouse mRNA for calreticulin          +1   137  5.1e-06   1
S79240               Lox4=Ultrabithorax/abdominal-A ho... +2   137  5.2e-06   1
X17199               Chicken mRNA for nucleolin C23       +2   137  5.4e-06   1
X16481               Rat mRNA for zinc(2+) binding pro... +2   128  5.8e-06   2
X54171;X53282        H.sapiens NG2-6 DNA                  +2   137  6.3e-06   1
L13238               Rattus norvegicus polymeric immun... +1   124  6.6e-06   1
L13200;L18807        C. elegans cosmid ZK1236.            +1   137  6.8e-06   1
AB001489             Mus musculus DNA for polyimmunogl... +2   137  6.8e-06   1
U59897               Macropus robustus hypoxanthine ph... +3   135  6.9e-06   1
Z97055               Human DNA sequence from PAC 388M5... -3   137  6.9e-06   1
L21696               Human (clone pHG5) prothymosin al... +1   120  7.2e-06   1
U93275               Mus musculus glucokinase gene, 5'... +1   136  7.2e-06   1
U52064               Kaposi's sarcoma-associated herpe... +1   136  7.7e-06   1
U08110               Mus musculus RNA1 homolog (Fug1) ... +2   125  8.4e-06   2
D38613               Mouse 921-L mRNA for presynaptic ... +3   122  8.8e-06   2
U02506               Rattus norvegicus clone 7 polymer... +2   130  8.9e-06   1
U35323               Mus musculus H2-M alpha chain (H2... -3   136  9.0e-06   1
AD000092             Homo sapiens DNA from chromosome ... +1   136  9.1e-06   1
U75698               Kaposi's sarcoma-associated herpe... -3   136  9.1e-06   1
AC004015             Human BAC clone RG333F24 from 7q1... -2   136  9.1e-06   1
M35983               Rat ID-A element in the S-100 bet... +3   121  9.2e-06   1
L21694               Human (clone pHG3) prothymosin al... +1   119  9.4e-06   1
U08273               Rattus norvegicus Wistar polymeri... +2   133  9.8e-06   1
Z69727               S.pombe chromosome I cosmid c4G9.    -3   125  1.1e-05   3
M60665               Rat prothymosin-alpha mRNA, 5' end.  +3   117  1.2e-05   1
U95743               Homo sapiens chromosome 16 BAC cl... +1   135  1.2e-05   1
X69986               R.norvegicus gene for GABAA recep... +1   134  1.4e-05   1
X07453;X66268        Plasmodium falciparum 11-1 gene p... +2   134  1.4e-05   1
D14636               Mouse mRNA for PEBP2a1 protein, c... -1   134  1.5e-05   1
A42910               Sequence 42 from Patent WO9502701.   +3   118  1.5e-05   1
AF025664             Bos taurus Na-Ca+K exchanger (BOS... +3   126  1.5e-05   2
AL010164             Plasmodium falciparum DNA *** SEQ... -1   134  1.6e-05   1
Z20656               Homo sapiens of cardiac alpha-myo... +1   134  1.6e-05   1
AF027865             Mus musculus Major Histocompatibi... -3   135  1.6e-05   2
AC000399             Genomic sequence from Mouse 9, co... -3   134  1.6e-05   1
U72731               Acipenser fulvescens microsatelli... +1   116  1.8e-05   1
Z99753               S.pombe chromosome I cosmid c23C4.   +3   117  1.8e-05   2
X98881               D.melanogaster mRNA for nuclear h... +2   133  1.8e-05   1
AC000022             Genomic sequence from Human Y, co... +1   133  2.1e-05   1
U95739               Human chromosome 16p11.2-p12 BAC ... +2   133  2.1e-05   1
AB006702             Arabidopsis thaliana genomic DNA,... -3   133  2.1e-05   1
Z92547               Human DNA sequence from PAC 863K1... +2   133  2.1e-05   1
X83976               G.gallus repetitive DNA (ID:Ggamc1)  +2   116  2.5e-05   1
L13462               Bovine calreticulin (brain isofor... +1   131  2.5e-05   1
AF025480             Bison bison Na-Ca+K exchanger (BI... +1   115  2.7e-05   2
U07886               Rattus norvegicus clone 15 polyme... +1   130  2.8e-05   1
M33025               Rattus norvegicus parathymosin mR... +3   114  3.2e-05   1
M20616               Rat spleen parathymosin-alpha mRN... +3   114  3.2e-05   1
L37092               Mus musculus cyclin-dependent kin... +2   131  3.2e-05   1
AF026132             Homo sapiens retinal rod Na+/Ca+,... +1   131  3.2e-05   1
AC001069             Homo sapiens (subclone 1_e1 from ... +1   131  3.2e-05   1
M63425               Tetrahymena thermophila high-mobi... +1   125  3.3e-05   1
U23752               Human SOX-11 mRNA, complete cds.     +1   110  3.4e-05   2
J03902               Plasmodium falciparum p101/acidic... +1   131  3.4e-05   1
AB002322             Human mRNA for KIAA0324 gene, par... -3   131  3.5e-05   1
Z95620               S.pombe chromosome II cosmid c3D6.   +1   134  3.6e-05   2
Z82196               Human DNA sequence from PAC 288L1    -1   131  3.8e-05   1
AC003664             Homo sapiens chromosome 17, clone... -3   131  3.8e-05   1
M15514               P.falciparum acidic basic repeat ... +1   128  4.1e-05   1
A12521               Ag189 clone                          +1   128  4.1e-05   1
U88154               Human proline and glutamic acid r... +1   130  4.2e-05   1
U88153               Human p160 mRNA, complete cds.       +1   130  4.3e-05   1
AF004294             Mus musculus myelin transcription... +1   130  4.5e-05   1
U88172               Caenorhabditis elegans cosmid ZK354. -3   130  4.9e-05   1
U65590               Homo sapiens IL-1 receptor antago... -1   130  4.9e-05   1
AL021812             Human DNA sequence from cosmid U8... -1   130  5.0e-05   1
L13297               Rattus norvegicus tandem repeat m... +1   116  5.0e-05   1
Z28410               C.roseus mRNA for HMG protein.       +1   129  5.0e-05   1
M26549;J05039        Human alpha-1 collagen type IV ge... -1   112  5.1e-05   1
X67597               X.laevis mRNA for calreticulin (c... +1   128  5.3e-05   1
X66481               B.taurus mRNA for Na/Ca,K-exchanger  +2   126  5.9e-05   2
U01087               Drosophila melanogaster Canton S ... +3   129  6.0e-05   1
M64239               Mouse T-cell receptor alpha/delta... -1   131  6.2e-05   2
L20955               Human promthymosin alpha (PTMA) g... +1   112  6.2e-05   1
U19755               Mus domesticus thyroid transcript... -2   129  6.4e-05   1
AF043692             Caenorhabditis elegans cosmid C17F3. +2   131  6.9e-05   2
J04802               Human prothymosin-alpha pseudogen... +1   123  7.3e-05   1
L38856               Glycine max nucleosome assembly p... +1   127  7.4e-05   1
Z73546;U00094        S.cerevisiae chromosome XVI readi... -1   128  7.8e-05   1
E09676               cDNA encoding mouse mC26.            +2   128  8.0e-05   1
D16108               Mouse mC26 gene for GlyCAM-1, exo... +2   128  8.0e-05   1
Y07738               M.musculus gene for vimentin         -3   128  8.4e-05   1
AL021127             Mus musculus cosmid CMX137 contai... -3   112  8.5e-05   2
U35728               Xenopus laevis transcription fact... +3   127  8.6e-05   1
Z93389               Caenorhabditis elegans cosmid T13F3  +2   128  8.6e-05   1
Z81048               Caenorhabditis elegans cosmid C41G7  -2   128  8.7e-05   1
L15351               Mesocricetus auratus alpha-cardia... -1   128  8.7e-05   1
AC004044             Arabidopsis thaliana BAC T5J8 fro... +3   128  8.8e-05   1
U04817               Human protein kinase PITSLRE alph... +1   127  9.1e-05   1
X69838;S57461        H.sapiens mRNA for G9a               +3   127  9.8e-05   1
X87461               M.merlangus DNA (CA)n (GGA)n poly... +3   111  0.00010   1
M60664               Rat prothymosin-alpha mRNA, 5' end.  +3   109  0.00010   1
J02722;M12129        Rat heme oxygenase gene, complete... -3   127  0.00011   1
Z68332               Human DNA sequence from cosmid V7... -1   117  0.00011   3
Z83122               Caenorhabditis elegans cosmid R11A5  +3   127  0.00011   1
S38627               {pseudogene} PTMAP5=prothymosin a... +3   123  0.00011   1
AC002078             Human BAC clone RG111H14 from 7q2... -2   127  0.00011   1
AC002287             Homo sapiens Chromosome 16 BAC cl... +1   127  0.00012   1
M32612               Rat neural cell adhesion molecule... +3   125  0.00012   1
D78590               Rana rugosa mRNA for calnexin, co... +2   106  0.00012   2
U07704               Human protein kinase PITSLRE isof... +1   126  0.00012   1
U04816               Human protein kinase PITSLRE alph... +1   126  0.00012   1
U04824               Human protein kinase PITSLRE alph... +1   126  0.00012   1
U72915               Human putative DNA dependent ATPa... +3   110  0.00012   1
U20857               Mus musculus RNA1 homolog (Fug1) ... +1   125  0.00014   1
AF029696             Sus scrofa SOX-9 protein mRNA, co... +1   125  0.00015   1
AL021332             Human DNA sequence from PAC 398A1... +1   126  0.00015   1
S57428               thymidine kinase {p53 binding fra... -1   110  0.00015   1
U07705               Human protein kinase PITSLRE isof... +1   125  0.00016   1
AF006040             Mus musculus Fas-binding protein ... +1   112  0.00017   2
AF030001             Mus musculus major histocompatibi... +3   122  0.00017   2
U35612               Homo sapiens SOX22 protein (SOX22... +3   109  0.00017   2
Z46629               Homo sapiens SOX9 mRNA.              +3   125  0.00018   1
L32832               Homo sapiens zinc finger homeodom... +2   125  0.00019   1
Z75553               Caenorhabditis elegans cosmid ZC443  -3   125  0.00020   1
M26708               Human prothymosin alpha mRNA (Pro... +3   123  0.00020   1
Z82052               Caenorhabditis elegans cosmid T25E12 -2   125  0.00020   1
AL008725             Human DNA sequence from PAC 148E2... +3   125  0.00020   1
AC002044             Homo sapiens Chromosome 16 BAC cl... +3   125  0.00020   1
M24496;M21497        Mouse neurofilament largest subun... +3   124  0.00022   1
M86518               Plasmodium falciparum high mobili... +3   122  0.00022   1
L27124               Rattus sp. NRD convertase (NRDC) ... +2   124  0.00023   1
U19361               Petromyzon marinus neurofilament ... +2   124  0.00023   1
X93208               Rattus sp. mRNA for NRD2 convertase  +2   124  0.00023   1
M69249               Mouse lipocortin I gene, upstream... -2   123  0.00023   1
M35131               Mouse neurofilament component (NF... +1   124  0.00023   1
Z31012               M.musculus (Swiss-Webster) NF-H g... +2   124  0.00023   1
Y14822               Mus musculus mRNA containing B1 e... -1   119  0.00024   1
Z35957;Y13134        S.cerevisiae chromosome II readin... -2   123  0.00024   1
Y11666               M.musculus gene encoding hexokina... -2   124  0.00024   1
AL009007             Plasmodium falciparum DNA *** SEQ... +1   124  0.00025   1
Y07542               X.laevis mRNA for SOX3 protein       +1   123  0.00025   1
Z48483               S.cerevisiae chromosome XVI cosmi... -2   124  0.00026   1
U33335;U00094        Saccharomyces cerevisiae chromoso... -1   124  0.00026   1
Z50797               Caenorhabditis elegans cosmid T22H6  -1   124  0.00026   1
AB009050             Arabidopsis thaliana genomic DNA,... +3   124  0.00026   1
S41694               {pseudogene} PTMAP2=prothymosin a... +1   122  0.00027   1
L07944               Plasmodium falciparum secreted po... +1   123  0.00027   1
M86310               Alligator ADW2 gene, partial cds.    +1   108  0.00027   1
X63091               X.laevis mRNA for nucleolin          +1   123  0.00028   1
U13695               Human homolog of yeast mutL (hPMS... +3   123  0.00029   1
AC000043             Human Chromosome 22q13 Cosmid Clo... +3   123  0.00030   1
D83256               Rainbow trout mRNA for SoxP1, com... +1   123  0.00030   1
S76368               ORF 5' of ECLF2...ECRF3=G protein... -3   123  0.00030   1
L27592               Plasmodium chabaudi adami erythro... +3   122  0.00031   1
AF004295             Mus musculus myelin transcription... +3   123  0.00031   1
X73480               D.hydei Dhmst101 (1) mRNA            +2   122  0.00033   1
L12020               Chelydra serpentina sex determini... +1   107  0.00034   1
L12022               Chelydra serpentina sex determini... +1   107  0.00034   1
Z81053               Caenorhabditis elegans cosmid E02A10 -2   123  0.00034   1
M86409               Herpesvirus saimiri the most thre... -3   123  0.00035   1
AF003627             Homo sapiens cosmids Qc5E3, LC183... +1   123  0.00035   1
U49178               Bos taurus 60.1 kDa protein kinas... +3   122  0.00035   1
X64346               Herpesvirus saimiri complete geno... -1   123  0.00035   1
M86337               Gecko MG42 gene, partial cds.        +1   107  0.00035   1
L07107               Mus musculus HMG box protein mRNA... +1   119  0.00036   1
U20951               Cricetulus griseus centromere aut... +3   122  0.00037   1
Z28201;Y13137        S.cerevisiae chromosome XI readin... -1   122  0.00037   1
AJ001183             Homo sapiens mRNA for Sox10 protein  +1   122  0.00037   1
U66141               Mus musculus transcription factor... +3   122  0.00038   1
AF017182             Mus musculus putative transcripti... +2   122  0.00038   1
U63858               Mus musculus mitochondrial transc... +2   119  0.00038   1
Y00500               Mouse glandular kallikrein gene      -3   122  0.00040   1
X55038               Mouse mCENP-B gene for centromere... +3   122  0.00040   1
J04799               Human prothymosin-alpha pseudogen... +2   121  0.00040   1
D83006               Yeast DNA for MNN4 gene, complete... +2   122  0.00040   1
U12533               Gallus gallus Sox9 transcription ... +3   121  0.00041   1
I20206               Sequence 21 from patent US 5514546.  -2   107  0.00041   1
M18061               Xenopus laevis vitelloginin gene,... -3   122  0.00042   1
X15147               Mouse Tla region T1c pseudogene f... -2   122  0.00043   1
AL010226             Plasmodium falciparum DNA *** SEQ... -3   122  0.00044   1
Y00354               Xenopus laevis gene for vitelloge... -2   122  0.00045   1
AB010266             Mus musculus Creb-rp, Tnx and Cyp... +3   122  0.00046   1
AC002464             Human BAC clone RG331P03, complet... -2   122  0.00046   1
AE000665;AE000522    Mus musculus TCR beta locus from ... -1   122  0.00046   1
M86313               Alligator AES1 gene, partial cds.    +1   106  0.00046   1
X96469               X.laevis mRNA for C4SR protein       +1   120  0.00047   1
M20481               Mouse brain neurofilament-M mRNA,... +1   117  0.00049   1
U31600               Heliocidaris erythrogramma HEHBOX... -2   120  0.00050   1
AJ001029             Rattus norvegicus mRNA for Sox10 ... +1   121  0.00050   1
Y07569               H.sapiens mRNA for PHAPI2a protein   +2   119  0.00054   1
X15750;X15209        Rabbit skeletal muscle mRNA for r... +3   121  0.00058   1
X15209               O.cuniculus mRNA for skeletal mus... +3   121  0.00058   1
U40059               Caenorhabditis elegans cosmid K03C7. +2   121  0.00059   1
M30298;J05078        Rat cardiac myosin light chain 2 ... -2   114  0.00059   1
AF047659             Caenorhabditis elegans cosmid K07H8. -2   121  0.00059   1
AC002497             Human Cosmid g1940a142 from 7q31.... +3   121  0.00059   1
L04508               Plasmodium berghei heat shock rel... +1   120  0.00060   1
D87209               Xenopus laevis mRNA for XLS13B pr... +3   120  0.00065   1
U63859               Mus musculus mitochondrial transc... +2   119  0.00065   1
Y07969               H.sapiens mRNA for APRIL protein     +3   119  0.00067   1
AL008970             Plasmodium falciparum DNA *** SEQ... -2   112  0.00068   2
U57939               Mus musculus mitochondrial transc... +1   119  0.00069   1
L21710               Plasmodium berghei 58 kDa phospho... +1   118  0.00069   1
U70439               Human silver-stainable protein SS... +1   119  0.00069   1
A50142               Sequence 1 from Patent WO9611267.    +1   119  0.00069   1
M33024               xattus norvegicus prothymosin-alp... +3   117  0.00071   1
M20035               Rat prothymosin-alpha mRNA, compl... +3   117  0.00071   1
Y00092               Chicken mRNA for progesterone rec... +1   120  0.00071   1
X90849               G.gallus PB1 gene                    +1   120  0.00072   1
U72736               Acipenser fulvescens microsatelli... +2   115  0.00073   1
M31104;J05240        Chicken progesterone receptor gen... +2   120  0.00074   1
U12825               Saccharomyces cerevisiae transcri... +3   119  0.00076   1
M95789               Plasmodium chabaudi acidic phosph... +2   119  0.00076   1
L12013               Chelydra serpentina sex determini... +1   104  0.00076   1
M86315               Alligator AES4 gene, partial cds.    +1   104  0.00078   1
J04943               Rat nucleolar protein B23.2 mRNA,... +1   118  0.00080   1
M12865               Yeast (S.cerevisiae) CAT repetiti... -3   104  0.00081   1
M25062               Rat nucleolar protein B23.1 mRNA,... +2   118  0.00084   1
J03969               Rat nucleolar protein B23 mRNA, c... +2   118  0.00084   1
Z28028;Y13137        S.cerevisiae chromosome XI readin... +1   119  0.00086   1
M87306               Tetrahymena thermophila micronucl... +1   119  0.00087   1
AF035263             Mus musculus BAF57 (Baf57) gene, ... +3   118  0.00090   1
X65657;S45834        M.musculus (testis) Sox-5 mRNA       +3   109  0.00091   2
M37518               Chicken progesterone receptor mRN... +3   119  0.00092   1
X05640               Mouse NF-M gene for middle-molecu... +1   117  0.00093   2
M69183               Plasmodium falciparum (MESA) mRNA... +1   119  0.00093   1
AF035262             Homo sapiens BAF57 (BAF57) gene, ... +3   118  0.00094   1
D29711               Rice mRNA, partial homologous to ... +1   102  0.00097   1
X82260               H.sapiens mRNA for RanGTPase acti... +1   118  0.0010    1
U51243               Human alpha-albumin gene, complet... +1   119  0.0010    1
M86312               Alligator ADW5 gene, partial cds.    +1   103  0.0010    1
M86338               Gecko MG43 gene, partial cds.        +1   103  0.0010    1
Z82186               Human DNA sequence from Fosmid 49... +1   119  0.0010    1
Z82076               Caenorhabditis elegans cosmid W07G1  -3   119  0.0010    1
Z49939;Z71257        S.cerevisiae chromosome XIII cosm... -3   119  0.0010    1
Z49908               Caenorhabditis elegans cosmid C07E3  -1   119  0.0010    1
S79939               Prm3=protamine [rats, testis, mRN... +1   111  0.0010    1
M86564;M38736;M55393 Rat alpha-prothymosin mRNA, compl... +3   117  0.0011    1
X55326               R.rattus mRNA for alpha-prothymosin  +3   117  0.0011    1
X56135               Mouse mRNA for prothymosin alpha     +3   117  0.0011    1
M14630               Human prothymosin alpha mRNA, com... +1   117  0.0011    1
M55017;M37081        Rat nucleolin gene.                  +1   116  0.0011    1
D78589               Rana rugosa mRNA for calreticulin... +1   118  0.0011    1
M33212               Mouse nucleolar protein N038 mRNA... +1   117  0.0011    1
L14320               Bovine herpesvirus type 1 early-i... +3   117  0.0011    2
U95740               Human chromosome 16p13.1 BAC clon... -1   120  0.0012    2
L13236               Rattus norvegicus polymeric immun... +1   105  0.0012    1
M12658               Mouse 4.5S RNA gene.                 +3   118  0.0012    1
X91619               R.norvegicus mRNA for sca1 protein   -1   118  0.0013    1
X05496               Xenopus laevis mRNA for nucleolar... +3   116  0.0013    1
X86381               P.paniscus SRY gene                  +1   113  0.0013    1
U97085               Homo sapiens X-linked nuclear pro... +2   115  0.0013    1
M86314               Alligator AES2 gene, partial cds.    +1   102  0.0013    1
D26046               Mouse mRNA for AT motif-binding f... +2   118  0.0013    1
S51239               calreticulin [Aplysia californica... +1   117  0.0013    1
AC003994             Mouse cosmid ma53a271 from 14D1-D... +3   118  0.0014    1
Z47378               O.cuniculus mRNA for neurofilamen... +3   113  0.0014    2
X05299               Human mRNA (~95%) for major centr... +1   117  0.0015    1
U88047               Homo sapiens DNA binding protein ... +3   117  0.0015    1
U85970               Xenopus laevis middle molecular w... +1   117  0.0015    1
AF044914             Arabidopsis thaliana putative his... +1   115  0.0015    1
Y00067               Human gene for neurofilament subu... +2   115  0.0015    2
X55039               Human hCENP-B gene for centromere... +3   117  0.0015    2
U14974               Saccharomyces cerevisiae Nmd2p (N... +1   117  0.0016    1
U48809               Rattus norvegicus neural zinc fin... +3   117  0.0016    1
U35655               Ovis aries centromere protein B (... +1   116  0.0016    1
U28158               Saccharomyces cerevisiae Ifs1p (I... +2   117  0.0016    1
U12137               Saccharomyces cerevisiae Upf2p (U... +1   117  0.0016    1
U81289               Pisum sativum NAP1Ps mRNA, comple... +2   116  0.0016    1
V01144               Sea urchin (P. miliaris) gene for... +1   117  0.0017    1
X13484;X15991;X15992 Mouse DNA for beta-casein            -2   117  0.0017    1
S41695               {pseudogene} PTMAP3=prothymosin a... +3   112  0.0018    1
U10556;U00093        Saccharomyces cerevisiae chromoso... -3   117  0.0018    1
AC002410             Human BAC clone RG264L19 from 7p1... +2   117  0.0018    1
U89959               Arabidopsis thaliana BAC T7I23, c... -2   117  0.0018    1
Z95704               Human DNA sequence from 4PTEL, Hu... +1   117  0.0018    1
AJ004801             Bovine herpesvirus 1 complete gen... +2   117  0.0018    1
U19717               Mus musculus cGMP-gated cation ch... +1   116  0.0018    1
Z97342               Arabidopsis thaliana DNA chromoso... -2   121  0.0018    2
U76758               Mus musculus erythroid ankyrin an... -1   112  0.0019    1
D78303               Rattus norvegicus brain mRNA, com... +2   116  0.0020    1
AB006448             Oncorhynchus mykiss SOX9 mRNA, co... +3   116  0.0020    1
M10239               Mouse DNA with homology to EBV IR... +2   114  0.0020    1
U12858               Arabidopsis thaliana Col-0 nucleo... +2   115  0.0020    1
M10667               Mouse DNA with homology to EBV IR... +1   113  0.0020    1
AL010252             Plasmodium falciparum DNA *** SEQ... -3   116  0.0021    1
X71422               M.musculus Hoxd-11 gene              -2   116  0.0021    1
M18628               Rat NF-M middle molecular weight ... +2   111  0.0022    2
L22219               Plasmodium falciparum transmissio... +3   116  0.0022    1
L08135               Plasmodium falciparum transmissio... +2   116  0.0022    1


WARNING:  Descriptions of 1638 database sequences were not reported due to the
          limiting value of parameter V = 500.



>X12597 Human mRNA for high mobility group-1 protein (HMG-1).
        Length = 1009

  Plus Strand HSPs:

 Score = 1144 (402.7 bits), Expect = 4.8e-115, P = 4.8e-115
 Identities = 214/214 (100%), Positives = 214/214 (100%), Frame = +2

Query:     1 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 60
             GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE
Sbjct:    56 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 235

Query:    61 DMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS 120
             DMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS
Sbjct:   236 DMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS 415

Query:   121 IGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKS 180
             IGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKS
Sbjct:   416 IGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKS 595

Query:   181 KKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             KKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE
Sbjct:   596 KKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 697


>X12796 Bovine mRNA for high mobility group 1 (HMG1) protein
        Length = 1236

  Plus Strand HSPs:

 Score = 1140 (401.3 bits), Expect = 1.0e-114, P = 1.0e-114
 Identities = 213/214 (99%), Positives = 214/214 (100%), Frame = +2

Query:     1 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 60
             GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE
Sbjct:   122 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 301

Query:    61 DMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS 120
             DMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS
Sbjct:   302 DMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS 481

Query:   121 IGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKS 180
             IGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKS
Sbjct:   482 IGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKS 661

Query:   181 KKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             KKKKEEEEDEEDEEDEEEEEDEEDE+EEEDDDDE
Sbjct:   662 KKKKEEEEDEEDEEDEEEEEDEEDEEEEEDDDDE 763


>Z11997 M.musculus mRNA for non-histone chromosomal high-mobility group 1
        Length = 2231

  Plus Strand HSPs:

 Score = 1137 (400.2 bits), Expect = 1.2e-114, P = 1.2e-114
 Identities = 212/214 (99%), Positives = 214/214 (100%), Frame = +1

Query:     1 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 60
             GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE
Sbjct:    76 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 255

Query:    61 DMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS 120
             DMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS
Sbjct:   256 DMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS 435

Query:   121 IGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKS 180
             IGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKS
Sbjct:   436 IGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKS 615

Query:   181 KKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             KKKKEEE+DEEDEEDEEEEE+EEDEDEEEDDDDE
Sbjct:   616 KKKKEEEDDEEDEEDEEEEEEEEDEDEEEDDDDE 717


>M21683;M21684 Pig nonhistone protein HMG1 mRNA, complete cds.
            Length = 2192

  Plus Strand HSPs:

 Score = 1135 (399.5 bits), Expect = 2.0e-114, P = 2.0e-114
 Identities = 212/214 (99%), Positives = 213/214 (99%), Frame = +3

Query:     1 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 60
             GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE
Sbjct:    12 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 191

Query:    61 DMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS 120
             DMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS
Sbjct:   192 DMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS 371

Query:   121 IGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKS 180
             IGDVAKKLGEMWNNTAADDK PYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKS
Sbjct:   372 IGDVAKKLGEMWNNTAADDKHPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKS 551

Query:   181 KKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             KKKKEEEEDEEDEEDEEEEEDEEDE+EEEDDDDE
Sbjct:   552 KKKKEEEEDEEDEEDEEEEEDEEDEEEEEDDDDE 653


>U00431 Mus musculus HMG-1 mRNA, complete cds.
        Length = 1308

  Plus Strand HSPs:

 Score = 1137 (400.2 bits), Expect = 2.0e-114, P = 2.0e-114
 Identities = 212/214 (99%), Positives = 214/214 (100%), Frame = +2

Query:     1 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 60
             GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE
Sbjct:   149 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 328

Query:    61 DMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS 120
             DMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS
Sbjct:   329 DMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS 508

Query:   121 IGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKS 180
             IGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKS
Sbjct:   509 IGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKS 688

Query:   181 KKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             KKKKEEE+DEEDEEDEEEEE+EEDEDEEEDDDDE
Sbjct:   689 KKKKEEEDDEEDEEDEEEEEEEEDEDEEEDDDDE 790


>M64986 Rat amphoterin mRNA, complete cds.
        Length = 1225

  Plus Strand HSPs:

 Score = 1137 (400.2 bits), Expect = 2.2e-114, P = 2.2e-114
 Identities = 212/214 (99%), Positives = 214/214 (100%), Frame = +3

Query:     1 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 60
             GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE
Sbjct:   126 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 305

Query:    61 DMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS 120
             DMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS
Sbjct:   306 DMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS 485

Query:   121 IGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKS 180
             IGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKS
Sbjct:   486 IGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKS 665

Query:   181 KKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             KKKKEEE+DEEDEEDEEEEE+EEDEDEEEDDDDE
Sbjct:   666 KKKKEEEDDEEDEEDEEEEEEEEDEDEEEDDDDE 767


>M63852 Rat high mobility group 1 protein synthetic gene, complete cds.
        Length = 924

  Plus Strand HSPs:

 Score = 1137 (400.2 bits), Expect = 2.9e-114, P = 2.9e-114
 Identities = 212/214 (99%), Positives = 214/214 (100%), Frame = +2

Query:     1 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 60
             GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE
Sbjct:    92 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 271

Query:    61 DMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS 120
             DMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS
Sbjct:   272 DMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS 451

Query:   121 IGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKS 180
             IGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKS
Sbjct:   452 IGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKS 631

Query:   181 KKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             KKKKEEE+DEEDEEDEEEEE+EEDEDEEEDDDDE
Sbjct:   632 KKKKEEEDDEEDEEDEEEEEEEEDEDEEEDDDDE 733


>Y00463 Rat mRNA for high mobility group protein HMG1
        Length = 825

  Plus Strand HSPs:

 Score = 1137 (400.2 bits), Expect = 3.2e-114, P = 3.2e-114
 Identities = 212/214 (99%), Positives = 214/214 (100%), Frame = +1

Query:     1 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 60
             GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE
Sbjct:    31 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 210

Query:    61 DMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS 120
             DMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS
Sbjct:   211 DMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS 390

Query:   121 IGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKS 180
             IGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKS
Sbjct:   391 IGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKS 570

Query:   181 KKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             KKKKEEE+DEEDEEDEEEEE+EEDEDEEEDDDDE
Sbjct:   571 KKKKEEEDDEEDEEDEEEEEEEEDEDEEEDDDDE 672


>L38477 Mus musculus (clone Clebp-1) high mobility group 1 protein (HMG-1)
        Length = 1225

  Plus Strand HSPs:

 Score = 1130 (397.8 bits), Expect = 1.2e-113, P = 1.2e-113
 Identities = 211/214 (98%), Positives = 213/214 (99%), Frame = +2

Query:     1 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 60
             GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE
Sbjct:    77 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 256

Query:    61 DMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS 120
             DMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS
Sbjct:   257 DMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS 436

Query:   121 IGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKS 180
             IGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKA KS
Sbjct:   437 IGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAVKS 616

Query:   181 KKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             KKKKEEE+DEEDEEDEEEEE+EEDEDEEEDDDDE
Sbjct:   617 KKKKEEEDDEEDEEDEEEEEEEEDEDEEEDDDDE 718


>D63874 Human mRNA for HMG-1, complete cds.
        Length = 1194

  Plus Strand HSPs:

 Score = 1124 (395.7 bits), Expect = 5.3e-113, P = 5.3e-113
 Identities = 211/214 (98%), Positives = 211/214 (98%), Frame = +2

Query:     1 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 60
             GKGDPKKPR KMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE
Sbjct:    80 GKGDPKKPRRKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 259

Query:    61 DMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS 120
             DMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS
Sbjct:   260 DMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS 439

Query:   121 IGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKS 180
             IGDVAKKLGEMWNNTAADDKQPYEKKA KLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKS
Sbjct:   440 IGDVAKKLGEMWNNTAADDKQPYEKKAEKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKS 619

Query:   181 KKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             KKKKEEEE EEDEEDEEEEEDEEDEDEEEDDDDE
Sbjct:   620 KKKKEEEEGEEDEEDEEEEEDEEDEDEEEDDDDE 721


>L08048 Human non-histone chromosomal protein (HMG-1) retropseudogene.
        Length = 1814

  Plus Strand HSPs:

 Score = 1119 (393.9 bits), Expect = 1.2e-112, P = 1.2e-112
 Identities = 212/215 (98%), Positives = 212/215 (98%), Frame = +1

Query:     1 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 60
             GKGDPKKP GKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE
Sbjct:   661 GKGDPKKPTGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 840

Query:    61 DMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS 120
             DMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKR PSAFFLFCSEYRPKIKGEHPGLS
Sbjct:   841 DMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRLPSAFFLFCSEYRPKIKGEHPGLS 1020

Query:   121 IGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKS 180
             IGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKS
Sbjct:  1021 IGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKS 1200

Query:   181 KKKKEEEEDEEDEEDEEEEEDEEDE-DEEEDDDDE 214
             KKKKEEEEDEEDEEDEEEEEDEEDE DEEEDDDDE
Sbjct:  1201 KKKKEEEEDEEDEEDEEEEEDEEDEEDEEEDDDDE 1305


>U51677 Human non-histone chromatin protein HMG1 (HMG1) gene, complete cds.
        Length = 2575

  Plus Strand HSPs:

 Score = 311 (109.5 bits), Expect = 1.8e-107, Sum P(4) = 1.8e-107
 Identities = 58/58 (100%), Positives = 58/58 (100%), Frame = +2

Query:    99 SAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEK 156
             SAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEK
Sbjct:   971 SAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEK 1144

 Score = 303 (106.7 bits), Expect = 1.8e-107, Sum P(4) = 1.8e-107
 Identities = 59/59 (100%), Positives = 59/59 (100%), Frame = +1

Query:   156 KDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             KDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE
Sbjct:  2146 KDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 2322

 Score = 276 (97.2 bits), Expect = 1.8e-107, Sum P(4) = 1.8e-107
 Identities = 50/54 (92%), Positives = 50/54 (92%), Frame = +1

Query:     1 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAK 54
             GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWK    K
Sbjct:     4 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKVRGLK 165

 Score = 265 (93.3 bits), Expect = 1.8e-107, Sum P(4) = 1.8e-107
 Identities = 52/56 (92%), Positives = 52/56 (92%), Frame = +3

Query:    50 TMSAKEKGKFEDMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPP--SAFFL 103
             TMSAKEKGKFEDMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPP  S  FL
Sbjct:   330 TMSAKEKGKFEDMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPP*VSCLFL 497

 Score = 80 (28.2 bits), Expect = 6.5e-31, Sum P(2) = 6.5e-31
 Identities = 18/60 (30%), Positives = 30/60 (50%), Frame = +2

Query:    13 SSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARYER 72
             S++  F    R + K +HP  S+   + +KK  E W   +A +K  +E  A   K +YE+
Sbjct:   971 SAFFLFCSEYRPKIKGEHPGLSIG--DVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEK 1144

 Score = 65 (22.9 bits), Expect = 2.4e-29, Sum P(2) = 2.4e-29
 Identities = 14/45 (31%), Positives = 22/45 (48%), Frame = +1

Query:    90 DPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIG--DVAKKLGEMW 132
             DP  P+   S++  F    R + K +HP  S+   + +KK  E W
Sbjct:    13 DPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERW 147

 Score = 42 (14.8 bits), Expect = 4.8e-24, Sum P(2) = 4.8e-24
 Identities = 11/37 (29%), Positives = 19/37 (51%), Frame = +3

Query:   136 AADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKK 172
             +A +K  +E  A   K +YE+++  Y    K +  KK
Sbjct:   336 SAKEKGKFEDMAKADKARYEREMKTY-IPPKGETKKK 443


>X80457 M.musculus HMG1 gene
        Length = 2547

  Plus Strand HSPs:

 Score = 311 (109.5 bits), Expect = 1.0e-105, Sum P(4) = 1.0e-105
 Identities = 58/58 (100%), Positives = 58/58 (100%), Frame = +2

Query:    99 SAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEK 156
             SAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEK
Sbjct:  1010 SAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEK 1183

 Score = 292 (102.8 bits), Expect = 1.0e-105, Sum P(4) = 1.0e-105
 Identities = 56/59 (94%), Positives = 59/59 (100%), Frame = +2

Query:   156 KDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             KDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEE++EEDEEDEEEEE+EEDEDEEEDDDDE
Sbjct:  1997 KDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEDEEEDEEDEEEEEEEEDEDEEEDDDDE 2173

 Score = 273 (96.1 bits), Expect = 1.0e-105, Sum P(4) = 1.0e-105
 Identities = 49/49 (100%), Positives = 49/49 (100%), Frame = +2

Query:     1 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWK 49
             GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWK
Sbjct:   176 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWK 322

 Score = 262 (92.2 bits), Expect = 1.0e-105, Sum P(4) = 1.0e-105
 Identities = 49/49 (100%), Positives = 49/49 (100%), Frame = +2

Query:    50 TMSAKEKGKFEDMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPP 98
             TMSAKEKGKFEDMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPP
Sbjct:   470 TMSAKEKGKFEDMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPP 616

 Score = 110 (38.7 bits), Expect = 5.3e-56, Sum P(3) = 5.3e-56
 Identities = 24/63 (38%), Positives = 43/63 (68%), Frame = +2

Query:   145 KKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEED 204
             K  A  + K + D AA +   K + +KK   K E+  ++++EE++EE+EE+E+E+E+E+D
Sbjct:  1997 KDIAAYRAKGKPD-AAKKGVVKAEKSKK---KKEEEDEEEDEEDEEEEEEEEDEDEEEDD 2164

Query:   205 EDE 207
             +DE
Sbjct:  2165 DDE 2173

 Score = 85 (29.9 bits), Expect = 2.9e-30, Sum P(2) = 2.9e-30
 Identities = 24/74 (32%), Positives = 36/74 (48%), Frame = +2

Query:    10 GKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKAR 69
             G  S++  F    R + K +HP  S+   + +KK  E W   +A +K  +E  A   K +
Sbjct:  1001 GFSSAFFLFCSEYRPKIKGEHPGLSIG--DVAKKLGEMWNNTAADDKQPYEKKAAKLKEK 1174

Query:    70 YE--REMKTYIPPKGE 83
             YE  R M  Y P  G+
Sbjct:  1175 YEKVRRMTGY-PVLGD 1219

 Score = 65 (22.9 bits), Expect = 3.6e-28, Sum P(2) = 3.6e-28
 Identities = 14/45 (31%), Positives = 22/45 (48%), Frame = +2

Query:    90 DPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIG--DVAKKLGEMW 132
             DP  P+   S++  F    R + K +HP  S+   + +KK  E W
Sbjct:   185 DPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERW 319

 Score = 42 (14.8 bits), Expect = 9.8e-24, Sum P(2) = 9.8e-24
 Identities = 11/37 (29%), Positives = 19/37 (51%), Frame = +2

Query:   136 AADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKK 172
             +A +K  +E  A   K +YE+++  Y    K +  KK
Sbjct:   476 SAKEKGKFEDMAKADKARYEREMKTY-IPPKGETKKK 583


>Z95115 Human DNA sequence from BAC 445C9 on chromosome 22q12.1.
        Length = 131,398

  Plus Strand HSPs:

 Score = 1047 (368.6 bits), Expect = 8.8e-104, P = 8.8e-104
 Identities = 199/210 (94%), Positives = 202/210 (96%), Frame = +1

Query:     2 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 61
             KGDPKK RGKMSS+AFF QTCRE HKKKHPDASVN SEFSKKCSERWKTMSAKEKGKFED
Sbjct: 58000 KGDPKKLRGKMSSHAFFGQTCREAHKKKHPDASVNLSEFSKKCSERWKTMSAKEKGKFED 58179

Query:    62 MAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSI 121
             MAKADKA YEREMKTYIPPKGETKKKFKDPNAPKR PSAFFLFCS YRPKIKGEHPGLSI
Sbjct: 58180 MAKADKAHYEREMKTYIPPKGETKKKFKDPNAPKRTPSAFFLFCSAYRPKIKGEHPGLSI 58359

Query:   122 GDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSK 181
             GDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSK
Sbjct: 58360 GDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSK 58539

Query:   182 KKKEEEEDEEDEEDEEEEEDEEDEDEEEDD 211
             KKKEEEEDEEDEEDEEEE DEEDEDEE+D+
Sbjct: 58540 KKKEEEEDEEDEEDEEEE-DEEDEDEEDDE 58626


>U21933 Xenopus laevis high mobility group protein-1 (HMG-1) mRNA, complete
        Length = 1552

  Plus Strand HSPs:

 Score = 979 (344.6 bits), Expect = 9.5e-98, P = 9.5e-98
 Identities = 181/214 (84%), Positives = 199/214 (92%), Frame = +3

Query:     1 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 60
             GKGDPKKPRGKMSSYA+FVQTCREEHKKKHPDASVNF+EFSKKCSERWKTMS KEK KFE
Sbjct:    60 GKGDPKKPRGKMSSYAYFVQTCREEHKKKHPDASVNFAEFSKKCSERWKTMS-KEKTKFE 236

Query:    61 DMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS 120
             DMAKADK RYEREMK+YIPPKGETKK+FKDPNAPKRPPSAFFLFCS++RPKIKGEHPG +
Sbjct:   237 DMAKADKVRYEREMKSYIPPKGETKKRFKDPNAPKRPPSAFFLFCSDFRPKIKGEHPGST 416

Query:   121 IGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKS 180
             IGD+AKKLGEMWNNTA DDK PYE++AAKLKEKYEKD+AAYRAKGKP+ AKK   K EK+
Sbjct:   417 IGDIAKKLGEMWNNTATDDKLPYERRAAKLKEKYEKDVAAYRAKGKPEPAKKAPAKPEKA 596

Query:   181 KKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             KKK  EEEDE+D  DEEE+++EEDE+EEEDDDDE
Sbjct:   597 KKK--EEEDEDD--DEEEDDEEEDEEEEEDDDDE 686


>Y00365 Chinese hamster HMG-1 gene for high mobility group protein 1
        Length = 2058

  Plus Strand HSPs:

 Score = 948 (333.7 bits), Expect = 1.4e-94, P = 1.4e-94
 Identities = 178/180 (98%), Positives = 180/180 (100%), Frame = +1

Query:    35 VNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARYEREMKTYIPPKGETKKKFKDPNAP 94
             VNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARYEREMKTYIPPKGETKKKFKDPNAP
Sbjct:     1 VNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARYEREMKTYIPPKGETKKKFKDPNAP 180

Query:    95 KRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKY 154
             KRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKY
Sbjct:   181 KRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKY 360

Query:   155 EKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             EKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEE+DEEDEEDEEEEE+EEDEDEEEDDDDE
Sbjct:   361 EKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEDDEEDEEDEEEEEEEEDEDEEEDDDDE 540

 Score = 106 (37.3 bits), Expect = 0.026, P = 0.026
 Identities = 25/84 (29%), Positives = 41/84 (48%), Frame = +1

Query:     4 DPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMA 63
             DP  P+   S++  F    R + K +HP  S+   + +KK  E W   +A +K  +E  A
Sbjct:   166 DPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIG--DVAKKLGEMWNNTAADDKQPYEKKA 339

Query:    64 KADKARYEREMKTY-IPPKGETKKK 87
                K +YE+++  Y    K +  KK
Sbjct:   340 AKLKEKYEKDIAAYRAKGKPDAAKK 414


>X62534 H.sapiens HMG-2 mRNA
        Length = 1301

  Plus Strand HSPs:

 Score = 924 (325.3 bits), Expect = 7.6e-92, P = 7.6e-92
 Identities = 169/208 (81%), Positives = 188/208 (90%), Frame = +2

Query:     1 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 60
             GKGDP KPRGKMSSYAFFVQTCREEHKKKHPD+SVNF+EFSKKCSERWKTMSAKEK KFE
Sbjct:   218 GKGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFE 397

Query:    61 DMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS 120
             DMAK+DKARY+REMK Y+PPKG+ K K KDPNAPKRPPSAFFLFCSE+RPKIK EHPGLS
Sbjct:   398 DMAKSDKARYDREMKNYVPPKGDKKGKKKDPNAPKRPPSAFFLFCSEHRPKIKSEHPGLS 577

Query:   121 IGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKS 180
             IGD AKKLGEMW+  +A DKQPYE+KAAKLKEKYEKDIAAYRAKGK +A KKG  +   S
Sbjct:   578 IGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKEKYEKDIAAYRAKGKSEAGKKGPGRPTGS 757

Query:   181 KKKKEEEEDEEDEEDEEEEEDEEDEDEE 208
             KKK E E++EE+EE+E+E+E+EEDEDEE
Sbjct:   758 KKKNEPEDEEEEEEEEDEDEEEEDEDEE 841

 Score = 913 (321.4 bits), Expect = 1.1e-90, P = 1.1e-90
 Identities = 169/210 (80%), Positives = 188/210 (89%), Frame = +2

Query:     1 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 60
             GKGDP KPRGKMSSYAFFVQTCREEHKKKHPD+SVNF+EFSKKCSERWKTMSAKEK KFE
Sbjct:   218 GKGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFE 397

Query:    61 DMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS 120
             DMAK+DKARY+REMK Y+PPKG+ K K KDPNAPKRPPSAFFLFCSE+RPKIK EHPGLS
Sbjct:   398 DMAKSDKARYDREMKNYVPPKGDKKGKKKDPNAPKRPPSAFFLFCSEHRPKIKSEHPGLS 577

Query:   121 IGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKS 180
             IGD AKKLGEMW+  +A DKQPYE+KAAKLKEKYEKDIAAYRAKGK +A KKG  +   S
Sbjct:   578 IGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKEKYEKDIAAYRAKGKSEAGKKGPGRPTGS 757

Query:   181 KKKKEEEEDEEDEEDEEEEEDEEDEDEEED 210
             KKK E E++EE+EE+E+E+E+EEDEDEE  
Sbjct:   758 KKKNEPEDEEEEEEEEDEDEEEEDEDEE-- 841

 Score = 913 (321.4 bits), Expect = 1.1e-90, P = 1.1e-90
 Identities = 172/214 (80%), Positives = 187/214 (87%), Frame = +2

Query:     1 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 60
             GKGDP KPRGKMSSYAFFVQTCREEHKKKHPD+SVNF+EFSKKCSERWKTMSAKEK KFE
Sbjct:   218 GKGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFE 397

Query:    61 DMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS 120
             DMAK+DKARY+REMK Y+PPKG+ K K KDPNAPKRPPSAFFLFCSE+RPKIK EHPGLS
Sbjct:   398 DMAKSDKARYDREMKNYVPPKGDKKGKKKDPNAPKRPPSAFFLFCSEHRPKIKSEHPGLS 577

Query:   121 IGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKS 180
             IGD AKKLGEMW+  +A DKQPYE+KAAKLKEKYEKDIAAYRAKGK +A KKG  +   S
Sbjct:   578 IGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKEKYEKDIAAYRAKGKSEAGKKGPGRPTGS 757

Query:   181 KKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             KKK E E       DEEEEE+EEDEDEEE+D+DE
Sbjct:   758 KKKNEPE-------DEEEEEEEEDEDEEEEDEDE 838

 Score = 910 (320.3 bits), Expect = 2.3e-90, P = 2.3e-90
 Identities = 169/212 (79%), Positives = 188/212 (88%), Frame = +2

Query:     1 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 60
             GKGDP KPRGKMSSYAFFVQTCREEHKKKHPD+SVNF+EFSKKCSERWKTMSAKEK KFE
Sbjct:   218 GKGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFE 397

Query:    61 DMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS 120
             DMAK+DKARY+REMK Y+PPKG+ K K KDPNAPKRPPSAFFLFCSE+RPKIK EHPGLS
Sbjct:   398 DMAKSDKARYDREMKNYVPPKGDKKGKKKDPNAPKRPPSAFFLFCSEHRPKIKSEHPGLS 577

Query:   121 IGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKS 180
             IGD AKKLGEMW+  +A DKQPYE+KAAKLKEKYEKDIAAYRAKGK +A KKG  +   S
Sbjct:   578 IGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKEKYEKDIAAYRAKGKSEAGKKGPGRPTGS 757

Query:   181 KKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDD 212
             KKK E E    DEE+EEEEEDE++E+E+ED++
Sbjct:   758 KKKNEPE----DEEEEEEEEDEDEEEEDEDEE 841


>J02895 Pig non-histone chromosomal protein (HMG2) mRNA, complete cds.
        Length = 1153

  Plus Strand HSPs:

 Score = 923 (324.9 bits), Expect = 1.1e-91, P = 1.1e-91
 Identities = 171/210 (81%), Positives = 189/210 (90%), Frame = +3

Query:     1 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 60
             GKGDP KPRGKMSSYAFFVQTCREEHKKKHPD+SVNF+EFSKKCSERWKTMSAKEK KFE
Sbjct:   147 GKGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFE 326

Query:    61 DMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS 120
             DMAK+DKARY+REMK Y+PPKG+ K K KDPNAPKRPPSAFFLFCSE+RPKIK EHPGLS
Sbjct:   327 DMAKSDKARYDREMKNYVPPKGDKKGKKKDPNAPKRPPSAFFLFCSEHRPKIKSEHPGLS 506

Query:   121 IGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKS 180
             IGD AKKLGEMW+  +A DKQPYE+KAAKLKEKYEKDIAAYRAKGK +A KKG  +   S
Sbjct:   507 IGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKEKYEKDIAAYRAKGKGEAGKKGPGRPTGS 686

Query:   181 KKKKEEEEDEEDEEDEEEEEDEEDEDEEED 210
             KKK E E DEE+EE+EEE+EDEE+EDE+E+
Sbjct:   687 KKKNEPE-DEEEEEEEEEDEDEEEEDEDEE 773

 Score = 913 (321.4 bits), Expect = 1.3e-90, P = 1.3e-90
 Identities = 171/212 (80%), Positives = 189/212 (89%), Frame = +3

Query:     1 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 60
             GKGDP KPRGKMSSYAFFVQTCREEHKKKHPD+SVNF+EFSKKCSERWKTMSAKEK KFE
Sbjct:   147 GKGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFE 326

Query:    61 DMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS 120
             DMAK+DKARY+REMK Y+PPKG+ K K KDPNAPKRPPSAFFLFCSE+RPKIK EHPGLS
Sbjct:   327 DMAKSDKARYDREMKNYVPPKGDKKGKKKDPNAPKRPPSAFFLFCSEHRPKIKSEHPGLS 506

Query:   121 IGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKS 180
             IGD AKKLGEMW+  +A DKQPYE+KAAKLKEKYEKDIAAYRAKGK +A KKG  +   S
Sbjct:   507 IGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKEKYEKDIAAYRAKGKGEAGKKGPGRPTGS 686

Query:   181 KKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDD 212
             KKK E E DEE+EE+EEE+EDEE+EDE  D++
Sbjct:   687 KKKNEPE-DEEEEEEEEEDEDEEEEDE--DEE 773

 Score = 912 (321.0 bits), Expect = 1.6e-90, P = 1.6e-90
 Identities = 171/214 (79%), Positives = 188/214 (87%), Frame = +3

Query:     1 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 60
             GKGDP KPRGKMSSYAFFVQTCREEHKKKHPD+SVNF+EFSKKCSERWKTMSAKEK KFE
Sbjct:   147 GKGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFE 326

Query:    61 DMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS 120
             DMAK+DKARY+REMK Y+PPKG+ K K KDPNAPKRPPSAFFLFCSE+RPKIK EHPGLS
Sbjct:   327 DMAKSDKARYDREMKNYVPPKGDKKGKKKDPNAPKRPPSAFFLFCSEHRPKIKSEHPGLS 506

Query:   121 IGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKS 180
             IGD AKKLGEMW+  +A DKQPYE+KAAKLKEKYEKDIAAYRAKGK +A KKG  +   S
Sbjct:   507 IGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKEKYEKDIAAYRAKGKGEAGKKGPGRPTGS 686

Query:   181 KKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             KKK E E++EE      EEE+EEDEDEEE+D+DE
Sbjct:   687 KKKNEPEDEEE------EEEEEEDEDEEEEDEDE 770


>D84418 Rat mRNA for chromosomal protein HMG2, complete cds.
        Length = 1072

  Plus Strand HSPs:

 Score = 914 (321.7 bits), Expect = 1.1e-90, P = 1.1e-90
 Identities = 168/210 (80%), Positives = 188/210 (89%), Frame = +3

Query:     1 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 60
             GKGDP KPRGKMSSYAFFVQTCREEHKKKHPD+SVNF+EFSKKCSERWKTMSAKEK KFE
Sbjct:    78 GKGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFE 257

Query:    61 DMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS 120
             D+AK+DKARY+REMK Y+PPKG+ K K KDPNAPKRPPSAFFLFCSE+RPKIK EHPGLS
Sbjct:   258 DLAKSDKARYDREMKNYVPPKGDKKGKKKDPNAPKRPPSAFFLFCSEHRPKIKSEHPGLS 437

Query:   121 IGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKS 180
             IGD AKKLGEMW+  +A DKQPYE+KAAKLKEKYEKDIAAYRAKGK +  KKG  +   S
Sbjct:   438 IGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKEKYEKDIAAYRAKGKSEVGKKGPGRPTGS 617

Query:   181 KKKKEEEEDEEDEEDEEEEEDEEDEDEEED 210
             KKK E E DEE+EE+EE++EDEE+EDE+E+
Sbjct:   618 KKKNEPE-DEEEEEEEEDDEDEEEEDEDEE 704

 Score = 910 (320.3 bits), Expect = 2.8e-90, P = 2.8e-90
 Identities = 171/214 (79%), Positives = 188/214 (87%), Frame = +3

Query:     1 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 60
             GKGDP KPRGKMSSYAFFVQTCREEHKKKHPD+SVNF+EFSKKCSERWKTMSAKEK KFE
Sbjct:    78 GKGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFE 257

Query:    61 DMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS 120
             D+AK+DKARY+REMK Y+PPKG+ K K KDPNAPKRPPSAFFLFCSE+RPKIK EHPGLS
Sbjct:   258 DLAKSDKARYDREMKNYVPPKGDKKGKKKDPNAPKRPPSAFFLFCSEHRPKIKSEHPGLS 437

Query:   121 IGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKS 180
             IGD AKKLGEMW+  +A DKQPYE+KAAKLKEKYEKDIAAYRAKGK +  KKG  +   S
Sbjct:   438 IGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKEKYEKDIAAYRAKGKSEVGKKGPGRPTGS 617

Query:   181 KKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             KKK E E    DEE+EEEEED+EDE EEED+D+E
Sbjct:   618 KKKNEPE----DEEEEEEEEDDEDE-EEEDEDEE 704


>Z46757 M.musculus mRNA for high mobility group 2 protein.
        Length = 870

  Plus Strand HSPs:

 Score = 914 (321.7 bits), Expect = 1.3e-90, P = 1.3e-90
 Identities = 168/209 (80%), Positives = 188/209 (89%), Frame = +1

Query:     1 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 60
             GKGDP KPRGKMSSYAFFVQTCREEHKKKHPD+SVNF+EFSKKCSERWKTMSAKEK KFE
Sbjct:   100 GKGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFE 279

Query:    61 DMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS 120
             D+AK+DKARY+REMK Y+PPKG+ K K KDPNAPKRPPSAFFLFCSE RPKIK EHPGLS
Sbjct:   280 DLAKSDKARYDREMKNYVPPKGDKKGKKKDPNAPKRPPSAFFLFCSENRPKIKIEHPGLS 459

Query:   121 IGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKS 180
             IGD AKKLGEMW+  +A DKQPYE+KAAKLKEKYEKDIAAYRAKGK +A KKG  +   S
Sbjct:   460 IGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKEKYEKDIAAYRAKGKSEAGKKGPGRPTGS 639

Query:   181 KKKKEEEEDEEDEEDEEEEEDEEDEDEEE 209
             KKK E E++EE+EE+EEEE+DEE+E++EE
Sbjct:   640 KKKNEPEDEEEEEEEEEEEDDEEEEEDEE 726

 Score = 909 (320.0 bits), Expect = 4.4e-90, P = 4.4e-90
 Identities = 169/210 (80%), Positives = 188/210 (89%), Frame = +1

Query:     1 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 60
             GKGDP KPRGKMSSYAFFVQTCREEHKKKHPD+SVNF+EFSKKCSERWKTMSAKEK KFE
Sbjct:   100 GKGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFE 279

Query:    61 DMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS 120
             D+AK+DKARY+REMK Y+PPKG+ K K KDPNAPKRPPSAFFLFCSE RPKIK EHPGLS
Sbjct:   280 DLAKSDKARYDREMKNYVPPKGDKKGKKKDPNAPKRPPSAFFLFCSENRPKIKIEHPGLS 459

Query:   121 IGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKS 180
             IGD AKKLGEMW+  +A DKQPYE+KAAKLKEKYEKDIAAYRAKGK +A KKG  +   S
Sbjct:   460 IGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKEKYEKDIAAYRAKGKSEAGKKGPGRPTGS 639

Query:   181 KKKKEEEEDEEDEEDEEEEEDEEDEDEEED 210
             KKK E E DEE+EE+EEEEED+E+E+E+E+
Sbjct:   640 KKKNEPE-DEEEEEEEEEEEDDEEEEEDEE 726

 Score = 906 (318.9 bits), Expect = 9.2e-90, P = 9.2e-90
 Identities = 171/212 (80%), Positives = 188/212 (88%), Frame = +1

Query:     1 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 60
             GKGDP KPRGKMSSYAFFVQTCREEHKKKHPD+SVNF+EFSKKCSERWKTMSAKEK KFE
Sbjct:   100 GKGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFE 279

Query:    61 DMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS 120
             D+AK+DKARY+REMK Y+PPKG+ K K KDPNAPKRPPSAFFLFCSE RPKIK EHPGLS
Sbjct:   280 DLAKSDKARYDREMKNYVPPKGDKKGKKKDPNAPKRPPSAFFLFCSENRPKIKIEHPGLS 459

Query:   121 IGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKS 180
             IGD AKKLGEMW+  +A DKQPYE+KAAKLKEKYEKDIAAYRAKGK +A KKG  +   S
Sbjct:   460 IGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKEKYEKDIAAYRAKGKSEAGKKGPGRPTGS 639

Query:   181 KKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDD 212
             KKK E E DEE+EE+EEEEED  DE+EEED++
Sbjct:   640 KKKNEPE-DEEEEEEEEEEED--DEEEEEDEE 726

 Score = 904 (318.2 bits), Expect = 1.5e-89, P = 1.5e-89
 Identities = 169/213 (79%), Positives = 188/213 (88%), Frame = +1

Query:     1 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 60
             GKGDP KPRGKMSSYAFFVQTCREEHKKKHPD+SVNF+EFSKKCSERWKTMSAKEK KFE
Sbjct:   100 GKGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFE 279

Query:    61 DMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS 120
             D+AK+DKARY+REMK Y+PPKG+ K K KDPNAPKRPPSAFFLFCSE RPKIK EHPGLS
Sbjct:   280 DLAKSDKARYDREMKNYVPPKGDKKGKKKDPNAPKRPPSAFFLFCSENRPKIKIEHPGLS 459

Query:   121 IGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKS 180
             IGD AKKLGEMW+  +A DKQPYE+KAAKLKEKYEKDIAAYRAKGK +A KKG  +   S
Sbjct:   460 IGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKEKYEKDIAAYRAKGKSEAGKKGPGRPTGS 639

Query:   181 KKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDD 213
             KKK E E    DEE+EEEEE+EED++EEE+D++
Sbjct:   640 KKKNEPE----DEEEEEEEEEEEDDEEEEEDEE 726

 Score = 902 (317.5 bits), Expect = 2.4e-89, P = 2.4e-89
 Identities = 171/214 (79%), Positives = 188/214 (87%), Frame = +1

Query:     1 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 60
             GKGDP KPRGKMSSYAFFVQTCREEHKKKHPD+SVNF+EFSKKCSERWKTMSAKEK KFE
Sbjct:   100 GKGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFE 279

Query:    61 DMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS 120
             D+AK+DKARY+REMK Y+PPKG+ K K KDPNAPKRPPSAFFLFCSE RPKIK EHPGLS
Sbjct:   280 DLAKSDKARYDREMKNYVPPKGDKKGKKKDPNAPKRPPSAFFLFCSENRPKIKIEHPGLS 459

Query:   121 IGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKS 180
             IGD AKKLGEMW+  +A DKQPYE+KAAKLKEKYEKDIAAYRAKGK +A KKG  +   S
Sbjct:   460 IGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKEKYEKDIAAYRAKGKSEAGKKGPGRPTGS 639

Query:   181 KKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             KKK E E    DEE+EEEEE+EED DEEE++D+E
Sbjct:   640 KKKNEPE----DEEEEEEEEEEED-DEEEEEDEE 726


>M83235 Gallus gallus non-histone chromosomal protein (HMG2) mRNA, complete
        Length = 1083

  Plus Strand HSPs:

 Score = 910 (320.3 bits), Expect = 2.8e-90, P = 2.8e-90
 Identities = 167/206 (81%), Positives = 184/206 (89%), Frame = +2

Query:     1 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 60
             GKGDP KPRGKMSSYA+FVQTCREEHKKKHPD+SVNF+EFS+KCSERWKTMS+KEKGKFE
Sbjct:    86 GKGDPNKPRGKMSSYAYFVQTCREEHKKKHPDSSVNFAEFSRKCSERWKTMSSKEKGKFE 265

Query:    61 DMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS 120
             +MAK DKARY+REMK Y+PPKGE K K KDPNAPKRPPSAFFLFCSE+RPKIK +HPGLS
Sbjct:   266 EMAKGDKARYDREMKNYVPPKGEKKGKKKDPNAPKRPPSAFFLFCSEHRPKIKNDHPGLS 445

Query:   121 IGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKS 180
             IGD AKKLGEMW+   A DKQPYE+KAAKLKEKYEKDIAAYRAK K DA KKG  +   S
Sbjct:   446 IGDTAKKLGEMWSEQLAKDKQPYEQKAAKLKEKYEKDIAAYRAKSKSDAGKKGPGRPAGS 625

Query:   181 KKKKEEEEDEEDEEDEEEEEDEEDED 206
             KKK E EE+EE+EEDEEEEE+EEDE+
Sbjct:   626 KKKAEPEEEEEEEEDEEEEEEEEDEE 703

 Score = 902 (317.5 bits), Expect = 2.0e-89, P = 2.0e-89
 Identities = 168/208 (80%), Positives = 184/208 (88%), Frame = +2

Query:     1 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 60
             GKGDP KPRGKMSSYA+FVQTCREEHKKKHPD+SVNF+EFS+KCSERWKTMS+KEKGKFE
Sbjct:    86 GKGDPNKPRGKMSSYAYFVQTCREEHKKKHPDSSVNFAEFSRKCSERWKTMSSKEKGKFE 265

Query:    61 DMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS 120
             +MAK DKARY+REMK Y+PPKGE K K KDPNAPKRPPSAFFLFCSE+RPKIK +HPGLS
Sbjct:   266 EMAKGDKARYDREMKNYVPPKGEKKGKKKDPNAPKRPPSAFFLFCSEHRPKIKNDHPGLS 445

Query:   121 IGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKS 180
             IGD AKKLGEMW+   A DKQPYE+KAAKLKEKYEKDIAAYRAK K DA KKG  +   S
Sbjct:   446 IGDTAKKLGEMWSEQLAKDKQPYEQKAAKLKEKYEKDIAAYRAKSKSDAGKKGPGRPAGS 625

Query:   181 KKKKEEEEDEEDEEDEEEEEDEEDEDEE 208
             KKK E EE+EE+EEDEEEEE+EEDE  E
Sbjct:   626 KKKAEPEEEEEEEEDEEEEEEEEDE--E 703

 Score = 891 (313.6 bits), Expect = 2.9e-88, P = 2.9e-88
 Identities = 167/212 (78%), Positives = 184/212 (86%), Frame = +2

Query:     1 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 60
             GKGDP KPRGKMSSYA+FVQTCREEHKKKHPD+SVNF+EFS+KCSERWKTMS+KEKGKFE
Sbjct:    86 GKGDPNKPRGKMSSYAYFVQTCREEHKKKHPDSSVNFAEFSRKCSERWKTMSSKEKGKFE 265

Query:    61 DMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS 120
             +MAK DKARY+REMK Y+PPKGE K K KDPNAPKRPPSAFFLFCSE+RPKIK +HPGLS
Sbjct:   266 EMAKGDKARYDREMKNYVPPKGEKKGKKKDPNAPKRPPSAFFLFCSEHRPKIKNDHPGLS 445

Query:   121 IGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKS 180
             IGD AKKLGEMW+   A DKQPYE+KAAKLKEKYEKDIAAYRAK K DA KKG  +   S
Sbjct:   446 IGDTAKKLGEMWSEQLAKDKQPYEQKAAKLKEKYEKDIAAYRAKSKSDAGKKGPGRPAGS 625

Query:   181 KKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDD 212
             KKK E EE+EE+EEDEEEEE+EEDE+      
Sbjct:   626 KKKAEPEEEEEEEEDEEEEEEEEDEE------ 703

 Score = 883 (310.8 bits), Expect = 2.0e-87, P = 2.0e-87
 Identities = 167/214 (78%), Positives = 183/214 (85%), Frame = +2

Query:     1 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 60
             GKGDP KPRGKMSSYA+FVQTCREEHKKKHPD+SVNF+EFS+KCSERWKTMS+KEKGKFE
Sbjct:    86 GKGDPNKPRGKMSSYAYFVQTCREEHKKKHPDSSVNFAEFSRKCSERWKTMSSKEKGKFE 265

Query:    61 DMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS 120
             +MAK DKARY+REMK Y+PPKGE K K KDPNAPKRPPSAFFLFCSE+RPKIK +HPGLS
Sbjct:   266 EMAKGDKARYDREMKNYVPPKGEKKGKKKDPNAPKRPPSAFFLFCSEHRPKIKNDHPGLS 445

Query:   121 IGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKS 180
             IGD AKKLGEMW+   A DKQPYE+KAAKLKEKYEKDIAAYRAK K DA KKG  +   S
Sbjct:   446 IGDTAKKLGEMWSEQLAKDKQPYEQKAAKLKEKYEKDIAAYRAKSKSDAGKKGPGRPAGS 625

Query:   181 KKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             KKK E EE+EE+EEDEEEEE+EEDE         
Sbjct:   626 KKKAEPEEEEEEEEDEEEEEEEEDE--------- 700

 Score = 111 (39.1 bits), Expect = 0.0051, P = 0.0051
 Identities = 31/121 (25%), Positives = 54/121 (44%), Frame = +2

Query:    63 AKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIG 122
             A+  +AR          P  E      DPN P+   S++  F    R + K +HP  S+ 
Sbjct:    14 AQGARARVANAKPPQPGPAAELAMGKGDPNKPRGKMSSYAYFVQTCREEHKKKHPDSSVN 193

Query:   123 --DVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKS 180
               + ++K  E W   ++ +K  +E+ A   K +Y++++  Y     P   KKG  K   +
Sbjct:   194 FAEFSRKCSERWKTMSSKEKGKFEEMAKGDKARYDREMKNYVP---PKGEKKGKKKDPNA 364

Query:   181 KKK 183
              K+
Sbjct:   365 PKR 373


>M80574 Gallus domesticus high-mobility group-2 protein (HMG-2) mRNA,
        Length = 995

  Plus Strand HSPs:

 Score = 900 (316.8 bits), Expect = 3.5e-89, P = 3.5e-89
 Identities = 165/206 (80%), Positives = 183/206 (88%), Frame = +1

Query:     1 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 60
             GKGDP KPRGKMSSYA+FVQTC  EHKKKHPD+SVNF+EFS+KCSERWKTMS+KEKGKFE
Sbjct:   103 GKGDPNKPRGKMSSYAYFVQTCPREHKKKHPDSSVNFAEFSRKCSERWKTMSSKEKGKFE 282

Query:    61 DMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS 120
             +MAK DKARY+REMK Y+PPKGE K K KDPNAPKRPPSAFFLFCSE+RPKIK +HPGLS
Sbjct:   283 EMAKGDKARYDREMKNYVPPKGEKKGKKKDPNAPKRPPSAFFLFCSEHRPKIKNDHPGLS 462

Query:   121 IGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKS 180
             IGD AKKLGEMW+  +A DKQPYE+KAAKLKEKYEKDIAAYRAK K DA KKG  +   S
Sbjct:   463 IGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKEKYEKDIAAYRAKSKSDAGKKGPGRPAGS 642

Query:   181 KKKKEEEEDEEDEEDEEEEEDEEDED 206
             KKK E EE+EE+EEDEEEEE+EEDE+
Sbjct:   643 KKKAEPEEEEEEEEDEEEEEEEEDEE 720

 Score = 892 (314.0 bits), Expect = 2.4e-88, P = 2.4e-88
 Identities = 166/208 (79%), Positives = 183/208 (87%), Frame = +1

Query:     1 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 60
             GKGDP KPRGKMSSYA+FVQTC  EHKKKHPD+SVNF+EFS+KCSERWKTMS+KEKGKFE
Sbjct:   103 GKGDPNKPRGKMSSYAYFVQTCPREHKKKHPDSSVNFAEFSRKCSERWKTMSSKEKGKFE 282

Query:    61 DMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS 120
             +MAK DKARY+REMK Y+PPKGE K K KDPNAPKRPPSAFFLFCSE+RPKIK +HPGLS
Sbjct:   283 EMAKGDKARYDREMKNYVPPKGEKKGKKKDPNAPKRPPSAFFLFCSEHRPKIKNDHPGLS 462

Query:   121 IGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKS 180
             IGD AKKLGEMW+  +A DKQPYE+KAAKLKEKYEKDIAAYRAK K DA KKG  +   S
Sbjct:   463 IGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKEKYEKDIAAYRAKSKSDAGKKGPGRPAGS 642

Query:   181 KKKKEEEEDEEDEEDEEEEEDEEDEDEE 208
             KKK E EE+EE+EEDEEEEE+EEDE  E
Sbjct:   643 KKKAEPEEEEEEEEDEEEEEEEEDE--E 720

 Score = 881 (310.1 bits), Expect = 3.6e-87, P = 3.6e-87
 Identities = 165/212 (77%), Positives = 183/212 (86%), Frame = +1

Query:     1 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 60
             GKGDP KPRGKMSSYA+FVQTC  EHKKKHPD+SVNF+EFS+KCSERWKTMS+KEKGKFE
Sbjct:   103 GKGDPNKPRGKMSSYAYFVQTCPREHKKKHPDSSVNFAEFSRKCSERWKTMSSKEKGKFE 282

Query:    61 DMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS 120
             +MAK DKARY+REMK Y+PPKGE K K KDPNAPKRPPSAFFLFCSE+RPKIK +HPGLS
Sbjct:   283 EMAKGDKARYDREMKNYVPPKGEKKGKKKDPNAPKRPPSAFFLFCSEHRPKIKNDHPGLS 462

Query:   121 IGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKS 180
             IGD AKKLGEMW+  +A DKQPYE+KAAKLKEKYEKDIAAYRAK K DA KKG  +   S
Sbjct:   463 IGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKEKYEKDIAAYRAKSKSDAGKKGPGRPAGS 642

Query:   181 KKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDD 212
             KKK E EE+EE+EEDEEEEE+EEDE+      
Sbjct:   643 KKKAEPEEEEEEEEDEEEEEEEEDEE------ 720

 Score = 873 (307.3 bits), Expect = 2.5e-86, P = 2.5e-86
 Identities = 165/214 (77%), Positives = 182/214 (85%), Frame = +1

Query:     1 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 60
             GKGDP KPRGKMSSYA+FVQTC  EHKKKHPD+SVNF+EFS+KCSERWKTMS+KEKGKFE
Sbjct:   103 GKGDPNKPRGKMSSYAYFVQTCPREHKKKHPDSSVNFAEFSRKCSERWKTMSSKEKGKFE 282

Query:    61 DMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS 120
             +MAK DKARY+REMK Y+PPKGE K K KDPNAPKRPPSAFFLFCSE+RPKIK +HPGLS
Sbjct:   283 EMAKGDKARYDREMKNYVPPKGEKKGKKKDPNAPKRPPSAFFLFCSEHRPKIKNDHPGLS 462

Query:   121 IGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKS 180
             IGD AKKLGEMW+  +A DKQPYE+KAAKLKEKYEKDIAAYRAK K DA KKG  +   S
Sbjct:   463 IGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKEKYEKDIAAYRAKSKSDAGKKGPGRPAGS 642

Query:   181 KKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             KKK E EE+EE+EEDEEEEE+EEDE         
Sbjct:   643 KKKAEPEEEEEEEEDEEEEEEEEDE--------- 717

 Score = 103 (36.3 bits), Expect = 0.042, P = 0.041
 Identities = 30/121 (24%), Positives = 53/121 (43%), Frame = +1

Query:    63 AKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIG 122
             A+  +AR          P  E      DPN P+   S++  F      + K +HP  S+ 
Sbjct:    31 AQGARARVANAKPPQPGPAAELAMGKGDPNKPRGKMSSYAYFVQTCPREHKKKHPDSSVN 210

Query:   123 --DVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKS 180
               + ++K  E W   ++ +K  +E+ A   K +Y++++  Y     P   KKG  K   +
Sbjct:   211 FAEFSRKCSERWKTMSSKEKGKFEEMAKGDKARYDREMKNYVP---PKGEKKGKKKDPNA 381

Query:   181 KKK 183
              K+
Sbjct:   382 PKR 390


>D30765 Xenopus laevis mRNA for HMG-X protein, complete cds.
        Length = 1081

  Plus Strand HSPs:

 Score = 871 (306.6 bits), Expect = 3.8e-86, P = 3.8e-86
 Identities = 162/211 (76%), Positives = 183/211 (86%), Frame = +3

Query:     1 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 60
             GKGDP KPRGKMSSYA+FVQTCREEHKKKHPD SVNFS+FSKKCSERWK+MSAKEKGKFE
Sbjct:   108 GKGDPNKPRGKMSSYAYFVQTCREEHKKKHPDTSVNFSDFSKKCSERWKSMSAKEKGKFE 287

Query:    61 DMAKADKARYEREMKTYIPPKGETK-KKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGL 119
             D+AK DKARYEREMKTYIPPKGETK K+ KDPNAPKRPPSAFF+FCSE+RP+IK E PGL
Sbjct:   288 DLAKGDKARYEREMKTYIPPKGETKGKRKKDPNAPKRPPSAFFIFCSEHRPQIKSETPGL 467

Query:   120 SIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEK 179
             SIGD AKKLGE+W      DK P+E+KAAKLKEKYEKD+AAYRAKGK D  KK   +A  
Sbjct:   468 SIGDTAKKLGELWAEQTPKDKLPHEQKAAKLKEKYEKDVAAYRAKGKSDVGKKVPGRATG 647

Query:   180 SKKKKE-EEEDEEDEEDEEEEEDEEDEDEEE 209
             SKKK E    D+E++EDEE+EEDE+D+D++E
Sbjct:   648 SKKKVEPHHHDDEEDEDEEDEEDEDDDDDDE 740

 Score = 869 (305.9 bits), Expect = 6.2e-86, P = 6.2e-86
 Identities = 162/212 (76%), Positives = 183/212 (86%), Frame = +3

Query:     1 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 60
             GKGDP KPRGKMSSYA+FVQTCREEHKKKHPD SVNFS+FSKKCSERWK+MSAKEKGKFE
Sbjct:   108 GKGDPNKPRGKMSSYAYFVQTCREEHKKKHPDTSVNFSDFSKKCSERWKSMSAKEKGKFE 287

Query:    61 DMAKADKARYEREMKTYIPPKGETK-KKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGL 119
             D+AK DKARYEREMKTYIPPKGETK K+ KDPNAPKRPPSAFF+FCSE+RP+IK E PGL
Sbjct:   288 DLAKGDKARYEREMKTYIPPKGETKGKRKKDPNAPKRPPSAFFIFCSEHRPQIKSETPGL 467

Query:   120 SIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEK 179
             SIGD AKKLGE+W      DK P+E+KAAKLKEKYEKD+AAYRAKGK D  KK   +A  
Sbjct:   468 SIGDTAKKLGELWAEQTPKDKLPHEQKAAKLKEKYEKDVAAYRAKGKSDVGKKVPGRATG 647

Query:   180 SKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDD 212
             SKKK E      D+E++E+EEDEEDED+++DD+
Sbjct:   648 SKKKVEPHH--HDDEEDEDEEDEEDEDDDDDDE 740

 Score = 869 (305.9 bits), Expect = 6.2e-86, P = 6.2e-86
 Identities = 167/214 (78%), Positives = 183/214 (85%), Frame = +3

Query:     1 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 60
             GKGDP KPRGKMSSYA+FVQTCREEHKKKHPD SVNFS+FSKKCSERWK+MSAKEKGKFE
Sbjct:   108 GKGDPNKPRGKMSSYAYFVQTCREEHKKKHPDTSVNFSDFSKKCSERWKSMSAKEKGKFE 287

Query:    61 DMAKADKARYEREMKTYIPPKGETK-KKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGL 119
             D+AK DKARYEREMKTYIPPKGETK K+ KDPNAPKRPPSAFF+FCSE+RP+IK E PGL
Sbjct:   288 DLAKGDKARYEREMKTYIPPKGETKGKRKKDPNAPKRPPSAFFIFCSEHRPQIKSETPGL 467

Query:   120 SIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEK 179
             SIGD AKKLGE+W      DK P+E+KAAKLKEKYEKD+AAYRAKGK D  KK   +A  
Sbjct:   468 SIGDTAKKLGELWAEQTPKDKLPHEQKAAKLKEKYEKDVAAYRAKGKSDVGKKVPGRATG 647

Query:   180 SKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             SKKK E     +DEEDE+EE DEEDED+  DDDDE
Sbjct:   648 SKKKVEPHH-HDDEEDEDEE-DEEDEDD--DDDDE 740


>U31513 Ambystoma mexicanum high mobility group protein-2 (HMG-2) mRNA,
        Length = 1048

  Plus Strand HSPs:

 Score = 868 (305.6 bits), Expect = 8.1e-86, P = 8.1e-86
 Identities = 165/215 (76%), Positives = 186/215 (86%), Frame = +1

Query:     1 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 60
             GKGDP KPRGKMSSYA+FVQTCREEHKKKHPDASVNF+EFSKKCSERWKTM+AKEKGKFE
Sbjct:    22 GKGDPNKPRGKMSSYAYFVQTCREEHKKKHPDASVNFAEFSKKCSERWKTMNAKEKGKFE 201

Query:    61 DMAKADKARYEREMKTYIPPKGETK-KKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGL 119
             DMAK DK RY+REMK+Y+PPKGETK KK KDPNAPKR PSAFFLFCSE+R KIK + PGL
Sbjct:   202 DMAKGDKVRYDREMKSYVPPKGETKGKKKKDPNAPKRLPSAFFLFCSEHRLKIKADCPGL 381

Query:   120 SIGDVAKKLGEMWNNTAADDKQP-YEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVK-A 177
             SIGD AKKLGE W+     DK P +E+KAAKLKEKYEKDIAAYRAKGK D  KK   + A
Sbjct:   382 SIGDTAKKLGEKWSEQTPKDKIPSFEQKAAKLKEKYEKDIAAYRAKGKVDVGKKAPGRPA 561

Query:   178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDD 212
               +KKK E E+DE+DEEDEEE+E+E+DE++EEDD+
Sbjct:   562 VAAKKKVEPEDDEDDEEDEEEDEEEDDEEDEEDDE 666

 Score = 862 (303.4 bits), Expect = 3.5e-85, P = 3.5e-85
 Identities = 164/215 (76%), Positives = 185/215 (86%), Frame = +1

Query:     1 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 60
             GKGDP KPRGKMSSYA+FVQTCREEHKKKHPDASVNF+EFSKKCSERWKTM+AKEKGKFE
Sbjct:    22 GKGDPNKPRGKMSSYAYFVQTCREEHKKKHPDASVNFAEFSKKCSERWKTMNAKEKGKFE 201

Query:    61 DMAKADKARYEREMKTYIPPKGETK-KKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGL 119
             DMAK DK RY+REMK+Y+PPKGETK KK KDPNAPKR PSAFFLFCSE+R KIK + PGL
Sbjct:   202 DMAKGDKVRYDREMKSYVPPKGETKGKKKKDPNAPKRLPSAFFLFCSEHRLKIKADCPGL 381

Query:   120 SIGDVAKKLGEMWNNTAADDKQP-YEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAE 178
             SIGD AKKLGE W+     DK P +E+KAAKLKEKYEKDIAAYRAKGK D  KK   +  
Sbjct:   382 SIGDTAKKLGEKWSEQTPKDKIPSFEQKAAKLKEKYEKDIAAYRAKGKVDVGKKAPGRPA 561

Query:   179 KSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
              + KKK E ED+ED+E E+EEEDEE++DEE+++DDE
Sbjct:   562 VAAKKKVEPEDDEDDE-EDEEEDEEEDDEEDEEDDE 666


>M83665 Human high mobility group 2 protein (HMG-2) gene, complete cds.
        Length = 4341

  Plus Strand HSPs:

 Score = 265 (93.3 bits), Expect = 2.3e-82, Sum P(4) = 2.3e-82
 Identities = 49/58 (84%), Positives = 53/58 (91%), Frame = +2

Query:    99 SAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEK 156
             SAFFLFCSE+RPKIK EHPGLSIGD AKKLGEMW+  +A DKQPYE+KAAKLKEKYEK
Sbjct:  2324 SAFFLFCSEHRPKIKSEHPGLSIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKEKYEK 2497

 Score = 264 (92.9 bits), Expect = 2.3e-82, Sum P(4) = 2.3e-82
 Identities = 46/55 (83%), Positives = 50/55 (90%), Frame = +1

Query:     1 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKE 55
             GKGDP KPRGKMSSYAFFVQTCREEHKKKHPD+SVNF+EFSKKCSERWK    ++
Sbjct:  1672 GKGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKVRQERD 1836

 Score = 220 (77.4 bits), Expect = 2.3e-82, Sum P(4) = 2.3e-82
 Identities = 40/50 (80%), Positives = 45/50 (90%), Frame = +1

Query:    49 KTMSAKEKGKFEDMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPP 98
             +TMSAKEK KFEDMAK+DKARY+REMK Y+PPKG+ K K KDPNAPKRPP
Sbjct:  2101 QTMSAKEKSKFEDMAKSDKARYDREMKNYVPPKGDKKGKKKDPNAPKRPP 2250

 Score = 179 (63.0 bits), Expect = 2.3e-82, Sum P(4) = 2.3e-82
 Identities = 34/53 (64%), Positives = 44/53 (83%), Frame = +2

Query:   156 KDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEE 208
             +DIAAYRAKGK +A KKG  +   SKKK E E++EE+EE+E+E+E+EEDEDEE
Sbjct:  3077 QDIAAYRAKGKSEAGKKGPGRPTGSKKKNEPEDEEEEEEEEDEDEEEEDEDEE 3235

 Score = 168 (59.1 bits), Expect = 3.2e-81, Sum P(4) = 3.2e-81
 Identities = 34/55 (61%), Positives = 44/55 (80%), Frame = +2

Query:   156 KDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEED 210
             +DIAAYRAKGK +A KKG  +   SKKK E E++EE+EE+E+E+E+EEDEDEE  
Sbjct:  3077 QDIAAYRAKGKSEAGKKGPGRPTGSKKKNEPEDEEEEEEEEDEDEEEEDEDEE-- 3235

 Score = 168 (59.1 bits), Expect = 3.2e-81, Sum P(4) = 3.2e-81
 Identities = 37/59 (62%), Positives = 43/59 (72%), Frame = +2

Query:   156 KDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             +DIAAYRAKGK +A KKG  +   SKKK E E       DEEEEE+EEDEDEEE+D+DE
Sbjct:  3077 QDIAAYRAKGKSEAGKKGPGRPTGSKKKNEPE-------DEEEEEEEEDEDEEEEDEDE 3232

 Score = 165 (58.1 bits), Expect = 6.5e-81, Sum P(4) = 6.5e-81
 Identities = 34/57 (59%), Positives = 44/57 (77%), Frame = +2

Query:   156 KDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDD 212
             +DIAAYRAKGK +A KKG  +   SKKK E E    DEE+EEEEEDE++E+E+ED++
Sbjct:  3077 QDIAAYRAKGKSEAGKKGPGRPTGSKKKNEPE----DEEEEEEEEDEDEEEEDEDEE 3235

 Score = 90 (31.7 bits), Expect = 2.2e-18, Sum P(2) = 2.2e-18
 Identities = 20/60 (33%), Positives = 31/60 (51%), Frame = +2

Query:    13 SSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARYER 72
             S++  F    R + K +HP  S+   + +KK  E W   SAK+K  +E  A   K +YE+
Sbjct:  2324 SAFFLFCSEHRPKIKSEHPGLSIG--DTAKKLGEMWSEQSAKDKQPYEQKAAKLKEKYEK 2497

 Score = 70 (24.6 bits), Expect = 2.7e-16, Sum P(2) = 2.7e-16
 Identities = 15/45 (33%), Positives = 23/45 (51%), Frame = +1

Query:    90 DPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIG--DVAKKLGEMW 132
             DPN P+   S++  F    R + K +HP  S+   + +KK  E W
Sbjct:  1681 DPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERW 1815


>X98857 L.fluviatilis mRNA for HMG protein
        Length = 1650

  Plus Strand HSPs:

 Score = 821 (289.0 bits), Expect = 4.9e-81, P = 4.9e-81
 Identities = 147/214 (68%), Positives = 186/214 (86%), Frame = +1

Query:     1 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 60
             GKGDPKKP+GKMSSYA+FVQTCREEHKKK+P+ASVNF+EFSKKCSERWKTMS KEK +FE
Sbjct:    76 GKGDPKKPKGKMSSYAYFVQTCREEHKKKNPEASVNFAEFSKKCSERWKTMSEKEKTRFE 255

Query:    61 DMAKADKARYEREMKTYIPPKGET-KKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGL 119
             DMAK DK RY+REMKTY+PPKGE   +K KDPNAPKRPPSAFF++C+EYR K++ E+PGL
Sbjct:   256 DMAKVDKVRYDREMKTYVPPKGERGSRKKKDPNAPKRPPSAFFIYCAEYRSKVRAENPGL 435

Query:   120 SIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEK 179
             +IG +AKKLGEMWNN  AD+K  YE+K AKLKEKY+KD+A+YR+KGK + +K   V ++ 
Sbjct:   436 TIGSIAKKLGEMWNNAPADEKSIYERKTAKLKEKYDKDMASYRSKGKVETSK---VASKP 606

Query:   180 SKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             + K++++++DE+D+E     ED+EDEDE++DDDDE
Sbjct:   607 ASKQRDDDDDEDDDE-----EDDEDEDEDDDDDDE 696


>X02666 Trout mRNA for high mobility group protein HMG-T
        Length = 716

  Plus Strand HSPs:

 Score = 824 (290.1 bits), Expect = 5.5e-81, P = 5.5e-81
 Identities = 148/208 (71%), Positives = 183/208 (87%), Frame = +1

Query:     1 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 60
             GK DP+KPRGKMSSYA+FVQT REEHKKKHP+ASVNFSEFSKKCSERWKTMSAKEKGKFE
Sbjct:     4 GK-DPRKPRGKMSSYAYFVQTRREEHKKKHPEASVNFSEFSKKCSERWKTMSAKEKGKFE 180

Query:    61 DMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS 120
             D+AK DK RYEREM++YIPPKGE KK+FKDPNAPKRP SAFF+FC+++RP++KGE PGLS
Sbjct:   181 DLAKLDKVRYEREMRSYIPPKGEKKKRFKDPNAPKRPSSAFFIFCADFRPQVKGETPGLS 360

Query:   121 IGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKS 180
             IGDVAKKLGE WNN  A+DK PYEKKA++LKEKYEKDI AYR KGK   +    + A+ +
Sbjct:   361 IGDVAKKLGEKWNNLTAEDKVPYEKKASRLKEKYEKDITAYRNKGKVPVS----MPAKAA 528

Query:   181 KKKKEEEEDEEDEEDEEEEEDEEDEDEE 208
                K++++D++D++D+E+++D++DED+E
Sbjct:   529 APAKDDDDDDDDDDDDEDDDDDDDEDDE 612

 Score = 811 (285.5 bits), Expect = 1.3e-79, P = 1.3e-79
 Identities = 150/214 (70%), Positives = 181/214 (84%), Frame = +1

Query:     1 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 60
             GK DP+KPRGKMSSYA+FVQT REEHKKKHP+ASVNFSEFSKKCSERWKTMSAKEKGKFE
Sbjct:     4 GK-DPRKPRGKMSSYAYFVQTRREEHKKKHPEASVNFSEFSKKCSERWKTMSAKEKGKFE 180

Query:    61 DMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS 120
             D+AK DK RYEREM++YIPPKGE KK+FKDPNAPKRP SAFF+FC+++RP++KGE PGLS
Sbjct:   181 DLAKLDKVRYEREMRSYIPPKGEKKKRFKDPNAPKRPSSAFFIFCADFRPQVKGETPGLS 360

Query:   121 IGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKS 180
             IGDVAKKLGE WNN  A+DK PYEKKA++LKEKYEKDI AYR KGK   +     KA   
Sbjct:   361 IGDVAKKLGEKWNNLTAEDKVPYEKKASRLKEKYEKDITAYRNKGKVPVSMPA--KAAAP 534

Query:   181 KKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
              K        +D++D+++++D+ED+D+++D+DDE
Sbjct:   535 AK--------DDDDDDDDDDDDEDDDDDDDEDDE 612


>X63463 G.gallus HMG2a mRNA
        Length = 1073

  Plus Strand HSPs:

 Score = 814 (286.5 bits), Expect = 4.2e-80, P = 4.2e-80
 Identities = 155/206 (75%), Positives = 177/206 (85%), Frame = +1

Query:     2 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 61
             KGDPKKP+GKMS+YAFFVQTCREEHKKK+P+  VNF+EFSKKCSERWKTMS+KEK KF++
Sbjct:    67 KGDPKKPKGKMSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSSKEKAKFDE 246

Query:    62 MAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSI 121
             MAKADK RY+REMK Y P KG  KKK  DPNAPKRPPSAFFLFCSE+RPKIK  +PG+SI
Sbjct:   247 MAKADKVRYDREMKDYGPAKGGKKKK--DPNAPKRPPSAFFLFCSEFRPKIKSTNPGISI 420

Query:   122 GDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSK 181
             GDVAKKLGEMWNN +  +KQPY  KAAKLKEKYEKD+A Y++KGK D AK G   A K+ 
Sbjct:   421 GDVAKKLGEMWNNLSDGEKQPYNNKAAKLKEKYEKDVADYKSKGKFDGAK-GA--ATKAA 591

Query:   182 KKKEEEEDEEDEEDEEEEEDEEDEDE 207
             +KK EEEDEE+EEDEEEE DE+D+DE
Sbjct:   592 RKKVEEEDEEEEEDEEEE-DEDDDDE 666

 Score = 804 (283.0 bits), Expect = 4.8e-79, P = 4.8e-79
 Identities = 156/213 (73%), Positives = 177/213 (83%), Frame = +1

Query:     2 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 61
             KGDPKKP+GKMS+YAFFVQTCREEHKKK+P+  VNF+EFSKKCSERWKTMS+KEK KF++
Sbjct:    67 KGDPKKPKGKMSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSSKEKAKFDE 246

Query:    62 MAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSI 121
             MAKADK RY+REMK Y P KG  KKK  DPNAPKRPPSAFFLFCSE+RPKIK  +PG+SI
Sbjct:   247 MAKADKVRYDREMKDYGPAKGGKKKK--DPNAPKRPPSAFFLFCSEFRPKIKSTNPGISI 420

Query:   122 GDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSK 181
             GDVAKKLGEMWNN +  +KQPY  KAAKLKEKYEKD+A Y++KGK D AK G   A K+ 
Sbjct:   421 GDVAKKLGEMWNNLSDGEKQPYNNKAAKLKEKYEKDVADYKSKGKFDGAK-GA--ATKAA 591

Query:   182 KKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             +KK EEEDEE+EEDEEEE+        EDDDDE
Sbjct:   592 RKKVEEEDEEEEEDEEEED--------EDDDDE 666


>X67668 M.musculus mRNA for high mobility group 2 protein
        Length = 847

  Plus Strand HSPs:

 Score = 810 (285.1 bits), Expect = 1.4e-79, P = 1.4e-79
 Identities = 154/204 (75%), Positives = 172/204 (84%), Frame = +1

Query:     1 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 60
             GKGDP KP GKMSSYAFFVQTCREEHKKKHP++SVNF+E SKKCS+RWKTMSAKE  KFE
Sbjct:   139 GKGDPIKPLGKMSSYAFFVQTCREEHKKKHPNSSVNFAEISKKCSKRWKTMSAKENSKFE 318

Query:    61 DMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS 120
             D+AK+DKA Y REMK Y+ PKG+ K K KDPNAPKRPPSAF LFCSE RPKIK E+PGLS
Sbjct:   319 DLAKSDKACYYREMKNYVSPKGDKKGKKKDPNAPKRPPSAFCLFCSENRPKIKIEYPGLS 498

Query:   121 IGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKS 180
             IGD AKKLGEMW+  +A +KQPYE+KAAKLKEKYEKD AAYR KGK +A KKG  +   S
Sbjct:   499 IGDTAKKLGEMWSEQSAKEKQPYEQKAAKLKEKYEKDFAAYRVKGKSEAGKKGPGRPAGS 678

Query:   181 KKKKEEEEDEEDEEDEE-EEEDEE 203
             KK   E+E+EE+EEDEE EEEDEE
Sbjct:   679 KKNDSEDEEEEEEEDEEGEEEDEE 750

 Score = 796 (280.2 bits), Expect = 4.3e-78, P = 4.3e-78
 Identities = 153/212 (72%), Positives = 173/212 (81%), Frame = +1

Query:     1 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 60
             GKGDP KP GKMSSYAFFVQTCREEHKKKHP++SVNF+E SKKCS+RWKTMSAKE  KFE
Sbjct:   139 GKGDPIKPLGKMSSYAFFVQTCREEHKKKHPNSSVNFAEISKKCSKRWKTMSAKENSKFE 318

Query:    61 DMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS 120
             D+AK+DKA Y REMK Y+ PKG+ K K KDPNAPKRPPSAF LFCSE RPKIK E+PGLS
Sbjct:   319 DLAKSDKACYYREMKNYVSPKGDKKGKKKDPNAPKRPPSAFCLFCSENRPKIKIEYPGLS 498

Query:   121 IGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKS 180
             IGD AKKLGEMW+  +A +KQPYE+KAAKLKEKYEKD AAYR KGK +A KKG  +   S
Sbjct:   499 IGDTAKKLGEMWSEQSAKEKQPYEQKAAKLKEKYEKDFAAYRVKGKSEAGKKGPGRPAGS 678

Query:   181 KKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDD 212
             KK         D EDEEEEE+E++E EEED++
Sbjct:   679 KKN--------DSEDEEEEEEEDEEGEEEDEE 750


>AF022465 Mus musculus high mobility group protein homolog HMG4 (Hmg4) mRNA,
          Length = 1502

  Plus Strand HSPs:

 Score = 801 (282.0 bits), Expect = 7.1e-79, P = 7.1e-79
 Identities = 149/201 (74%), Positives = 173/201 (86%), Frame = +1

Query:     2 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 61
             KGDPKKP+GKMS+YAFFVQTCREEHKKK+P+  VNF+EFSKKCSERWKTMS+KEK KF++
Sbjct:    34 KGDPKKPKGKMSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSSKEKSKFDE 213

Query:    62 MAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSI 121
             MAKADK RY+REMK Y P KG  KKK  DPNAPKRPPS FFLFCSE+RPKIK  +PG+SI
Sbjct:   214 MAKADKVRYDREMKDYGPAKGGKKKK--DPNAPKRPPSGFFLFCSEFRPKIKSTNPGISI 387

Query:   122 GDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSK 181
             GDVAKKLGEMWNN + ++KQPY  KAAKLKEKYEKD+A Y++KGK D AK G  K  + K
Sbjct:   388 GDVAKKLGEMWNNLSDNEKQPYVTKAAKLKEKYEKDVADYKSKGKFDGAK-GPAKVARKK 564

Query:   182 KKKEEEEDEEDEEDEEEEEDE 202
              ++EEEE+EE+EE+EEEEEDE
Sbjct:   565 VEEEEEEEEEEEEEEEEEEDE 627

 Score = 798 (280.9 bits), Expect = 1.5e-78, P = 1.5e-78
 Identities = 151/204 (74%), Positives = 174/204 (85%), Frame = +1

Query:     2 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 61
             KGDPKKP+GKMS+YAFFVQTCREEHKKK+P+  VNF+EFSKKCSERWKTMS+KEK KF++
Sbjct:    34 KGDPKKPKGKMSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSSKEKSKFDE 213

Query:    62 MAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSI 121
             MAKADK RY+REMK Y P KG  KKK  DPNAPKRPPS FFLFCSE+RPKIK  +PG+SI
Sbjct:   214 MAKADKVRYDREMKDYGPAKGGKKKK--DPNAPKRPPSGFFLFCSEFRPKIKSTNPGISI 387

Query:   122 GDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSK 181
             GDVAKKLGEMWNN + ++KQPY  KAAKLKEKYEKD+A Y++KGK D AK G  K  +  
Sbjct:   388 GDVAKKLGEMWNNLSDNEKQPYVTKAAKLKEKYEKDVADYKSKGKFDGAK-GPAKVAR-- 558

Query:   182 KKKEEEEDEEDEEDEEEEEDEEDE 205
              KK EEE+EE+EE+EEEEE+EEDE
Sbjct:   559 -KKVEEEEEEEEEEEEEEEEEEDE 627

 Score = 775 (272.8 bits), Expect = 4.1e-76, P = 4.1e-76
 Identities = 151/213 (70%), Positives = 175/213 (82%), Frame = +1

Query:     2 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 61
             KGDPKKP+GKMS+YAFFVQTCREEHKKK+P+  VNF+EFSKKCSERWKTMS+KEK KF++
Sbjct:    34 KGDPKKPKGKMSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSSKEKSKFDE 213

Query:    62 MAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSI 121
             MAKADK RY+REMK Y P KG  KKK  DPNAPKRPPS FFLFCSE+RPKIK  +PG+SI
Sbjct:   214 MAKADKVRYDREMKDYGPAKGGKKKK--DPNAPKRPPSGFFLFCSEFRPKIKSTNPGISI 387

Query:   122 GDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSK 181
             GDVAKKLGEMWNN + ++KQPY  KAAKLKEKYEKD+A Y++KGK D AK G  K   ++
Sbjct:   388 GDVAKKLGEMWNNLSDNEKQPYVTKAAKLKEKYEKDVADYKSKGKFDGAK-GPAKV--AR 558

Query:   182 KKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             KK EEEE+EE+EE+EEEEE+E          DE
Sbjct:   559 KKVEEEEEEEEEEEEEEEEEE----------DE 627


>Z17240 Homo sapiens for mRNA encoding HMG2B.
        Length = 1066

  Plus Strand HSPs:

 Score = 800 (281.6 bits), Expect = 1.3e-78, P = 1.3e-78
 Identities = 147/186 (79%), Positives = 166/186 (89%), Frame = +1

Query:    23 REEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARYEREMKTYIPPKG 82
             REEHKKKHPD+SVNF+EFSKKCSERWKTMSAKEK KFEDMAK+DKARY+REMK Y+PPKG
Sbjct:     1 REEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFEDMAKSDKARYDREMKNYVPPKG 180

Query:    83 ETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQP 142
             + K K KDPNAPKRPPSAFFLFCSE+RPKIK EHPGLSIGD AKKLGEMW+  +A DKQP
Sbjct:   181 DKKGKKKDPNAPKRPPSAFFLFCSEHRPKIKSEHPGLSIGDTAKKLGEMWSEQSAKDKQP 360

Query:   143 YEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDE 202
             YE+KAAKLKEKYEKDIAAY AKGK +A KKG  +   SKKK E E++EE+EE+E+E+E+E
Sbjct:   361 YEQKAAKLKEKYEKDIAAYGAKGKSEAGKKGPGRPTGSKKKNEPEDEEEEEEEEDEDEEE 540

Query:   203 EDEDEE 208
             EDEDEE
Sbjct:   541 EDEDEE 558

 Score = 789 (277.7 bits), Expect = 1.9e-77, P = 1.9e-77
 Identities = 147/188 (78%), Positives = 166/188 (88%), Frame = +1

Query:    23 REEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARYEREMKTYIPPKG 82
             REEHKKKHPD+SVNF+EFSKKCSERWKTMSAKEK KFEDMAK+DKARY+REMK Y+PPKG
Sbjct:     1 REEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFEDMAKSDKARYDREMKNYVPPKG 180

Query:    83 ETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQP 142
             + K K KDPNAPKRPPSAFFLFCSE+RPKIK EHPGLSIGD AKKLGEMW+  +A DKQP
Sbjct:   181 DKKGKKKDPNAPKRPPSAFFLFCSEHRPKIKSEHPGLSIGDTAKKLGEMWSEQSAKDKQP 360

Query:   143 YEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDE 202
             YE+KAAKLKEKYEKDIAAY AKGK +A KKG  +   SKKK E E++EE+EE+E+E+E+E
Sbjct:   361 YEQKAAKLKEKYEKDIAAYGAKGKSEAGKKGPGRPTGSKKKNEPEDEEEEEEEEDEDEEE 540

Query:   203 EDEDEEED 210
             EDEDEE  
Sbjct:   541 EDEDEE-- 558

 Score = 789 (277.7 bits), Expect = 1.9e-77, P = 1.9e-77
 Identities = 150/192 (78%), Positives = 165/192 (85%), Frame = +1

Query:    23 REEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARYEREMKTYIPPKG 82
             REEHKKKHPD+SVNF+EFSKKCSERWKTMSAKEK KFEDMAK+DKARY+REMK Y+PPKG
Sbjct:     1 REEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFEDMAKSDKARYDREMKNYVPPKG 180

Query:    83 ETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQP 142
             + K K KDPNAPKRPPSAFFLFCSE+RPKIK EHPGLSIGD AKKLGEMW+  +A DKQP
Sbjct:   181 DKKGKKKDPNAPKRPPSAFFLFCSEHRPKIKSEHPGLSIGDTAKKLGEMWSEQSAKDKQP 360

Query:   143 YEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDE 202
             YE+KAAKLKEKYEKDIAAY AKGK +A KKG  +   SKKK E E       DEEEEE+E
Sbjct:   361 YEQKAAKLKEKYEKDIAAYGAKGKSEAGKKGPGRPTGSKKKNEPE-------DEEEEEEE 519

Query:   203 EDEDEEEDDDDE 214
             EDEDEEE+D+DE
Sbjct:   520 EDEDEEEEDEDE 555

 Score = 786 (276.7 bits), Expect = 3.9e-77, P = 3.9e-77
 Identities = 147/190 (77%), Positives = 166/190 (87%), Frame = +1

Query:    23 REEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARYEREMKTYIPPKG 82
             REEHKKKHPD+SVNF+EFSKKCSERWKTMSAKEK KFEDMAK+DKARY+REMK Y+PPKG
Sbjct:     1 REEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFEDMAKSDKARYDREMKNYVPPKG 180

Query:    83 ETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQP 142
             + K K KDPNAPKRPPSAFFLFCSE+RPKIK EHPGLSIGD AKKLGEMW+  +A DKQP
Sbjct:   181 DKKGKKKDPNAPKRPPSAFFLFCSEHRPKIKSEHPGLSIGDTAKKLGEMWSEQSAKDKQP 360

Query:   143 YEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDE 202
             YE+KAAKLKEKYEKDIAAY AKGK +A KKG  +   SKKK E E    DEE+EEEEEDE
Sbjct:   361 YEQKAAKLKEKYEKDIAAYGAKGKSEAGKKGPGRPTGSKKKNEPE----DEEEEEEEEDE 528

Query:   203 EDEDEEEDDD 212
             ++E+E+ED++
Sbjct:   529 DEEEEDEDEE 558

 Score = 131 (46.1 bits), Expect = 1.9e-05, P = 1.9e-05
 Identities = 30/93 (32%), Positives = 47/93 (50%), Frame = +1

Query:     2 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 61
             K DP  P+   S++  F    R + K +HP  S+   + +KK  E W   SAK+K  +E 
Sbjct:   196 KKDPNAPKRPPSAFFLFCSEHRPKIKSEHPGLSIG--DTAKKLGEMWSEQSAKDKQPYEQ 369

Query:    62 MAKADKARYEREMKTYIPPKGETKKKFKDPNAP 94
              A   K +YE+++  Y   KG+++   K P  P
Sbjct:   370 KAAKLKEKYEKDIAAY-GAKGKSEAGKKGPGRP 465


>D14314 Chicken mRNA for HMG-1, complete cds.
        Length = 740

  Plus Strand HSPs:

 Score = 796 (280.2 bits), Expect = 4.9e-78, P = 4.9e-78
 Identities = 153/206 (74%), Positives = 175/206 (84%), Frame = +3

Query:     2 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 61
             KGDPKKP+GKMS+YAFFVQTCREEHKK +P+  VNF+EFSKKCSERWKTMS+KEK KF++
Sbjct:    27 KGDPKKPKGKMSAYAFFVQTCREEHKK-NPEVPVNFAEFSKKCSERWKTMSSKEKAKFDE 203

Query:    62 MAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSI 121
             MAKADK RY+REMK Y P KG  KKK  DPNAPKRPPS FFLFCSE+RPKIK  +PG+SI
Sbjct:   204 MAKADKVRYDREMKDYGPAKGGKKKK--DPNAPKRPPSGFFLFCSEFRPKIKSTNPGISI 377

Query:   122 GDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSK 181
             GDVAKKLGEMWNN +  +KQPY  KAAKLKEKYEKD+A Y++KGK D AK G   A K+ 
Sbjct:   378 GDVAKKLGEMWNNLSDGEKQPYNNKAAKLKEKYEKDVADYKSKGKFDGAK-GA--ATKAA 548

Query:   182 KKKEEEEDEEDEEDEEEEEDEEDEDE 207
             +KK EEEDEE+EEDEEEE DE+D+DE
Sbjct:   549 RKKVEEEDEEEEEDEEEE-DEDDDDE 623

 Score = 786 (276.7 bits), Expect = 5.6e-77, P = 5.6e-77
 Identities = 154/213 (72%), Positives = 175/213 (82%), Frame = +3

Query:     2 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 61
             KGDPKKP+GKMS+YAFFVQTCREEHKK +P+  VNF+EFSKKCSERWKTMS+KEK KF++
Sbjct:    27 KGDPKKPKGKMSAYAFFVQTCREEHKK-NPEVPVNFAEFSKKCSERWKTMSSKEKAKFDE 203

Query:    62 MAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSI 121
             MAKADK RY+REMK Y P KG  KKK  DPNAPKRPPS FFLFCSE+RPKIK  +PG+SI
Sbjct:   204 MAKADKVRYDREMKDYGPAKGGKKKK--DPNAPKRPPSGFFLFCSEFRPKIKSTNPGISI 377

Query:   122 GDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSK 181
             GDVAKKLGEMWNN +  +KQPY  KAAKLKEKYEKD+A Y++KGK D AK G   A K+ 
Sbjct:   378 GDVAKKLGEMWNNLSDGEKQPYNNKAAKLKEKYEKDVADYKSKGKFDGAK-GA--ATKAA 548

Query:   182 KKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             +KK EEEDEE+EEDEEEE+        EDDDDE
Sbjct:   549 RKKVEEEDEEEEEDEEEED--------EDDDDE 623


>Y10043 Homo sapiens mRNA for high mobility group protein HMG2a
        Length = 1633

  Plus Strand HSPs:

 Score = 784 (276.0 bits), Expect = 4.1e-77, P = 4.1e-77
 Identities = 150/204 (73%), Positives = 169/204 (82%), Frame = +3

Query:     2 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 61
             KGDPKKP+GK S+YAFFVQTCREEHKKK+P+  VNF+EFSKKCSERWKT+S KEK KF++
Sbjct:    93 KGDPKKPKGKTSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTVSGKEKSKFDE 272

Query:    62 MAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSI 121
             MAKADK RY+REMK Y P KG  KKK  DPNAPKRPPS FFLFCSE+RPKIK  +PG+SI
Sbjct:   273 MAKADKVRYDREMKDYGPAKGGKKKK--DPNAPKRPPSGFFLFCSEFRPKIKSTNPGISI 446

Query:   122 GDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSK 181
             GDVAKKLGEMWNN    +KQPY  KAAKLKEKYEKD+A Y++KGK D AK G  K  +  
Sbjct:   447 GDVAKKLGEMWNNLNDSEKQPYITKAAKLKEKYEKDVADYKSKGKFDGAK-GPAKVAR-- 617

Query:   182 KKKEEEEDEEDEEDEEEEEDEEDE 205
              KK EEEDEE EE+EEEEE+EEDE
Sbjct:   618 -KKVEEEDEEQEEEEEEEEEEEDE 686

 Score = 759 (267.2 bits), Expect = 1.8e-74, P = 1.8e-74
 Identities = 150/213 (70%), Positives = 169/213 (79%), Frame = +3

Query:     2 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 61
             KGDPKKP+GK S+YAFFVQTCREEHKKK+P+  VNF+EFSKKCSERWKT+S KEK KF++
Sbjct:    93 KGDPKKPKGKTSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTVSGKEKSKFDE 272

Query:    62 MAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSI 121
             MAKADK RY+REMK Y P KG  KKK  DPNAPKRPPS FFLFCSE+RPKIK  +PG+SI
Sbjct:   273 MAKADKVRYDREMKDYGPAKGGKKKK--DPNAPKRPPSGFFLFCSEFRPKIKSTNPGISI 446

Query:   122 GDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSK 181
             GDVAKKLGEMWNN    +KQPY  KAAKLKEKYEKD+A Y++KGK D AK G  K  +  
Sbjct:   447 GDVAKKLGEMWNNLNDSEKQPYITKAAKLKEKYEKDVADYKSKGKFDGAK-GPAKVAR-- 617

Query:   182 KKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
              KK EEEDEE EE+EEEEE+EEDE         
Sbjct:   618 -KKVEEEDEEQEEEEEEEEEEEDE--------- 686


>L32859 Rainbow trout HMG-1 gene exons 2-5, complete cds.
        Length = 3882

  Plus Strand HSPs:

 Score = 257 (90.5 bits), Expect = 1.1e-75, Sum P(4) = 1.1e-75
 Identities = 47/69 (68%), Positives = 56/69 (81%), Frame = +3

Query:    88 FKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKA 147
             F  P +     SAFF+FC+++RP++KGE PGLSIGDVAKKLGE WNN  A+DK PYEKKA
Sbjct:  2268 FLPPTSLPSSRSAFFIFCADFRPQVKGETPGLSIGDVAKKLGEKWNNLTAEDKVPYEKKA 2447

Query:   148 AKLKEKYEK 156
             +KLKEKYEK
Sbjct:  2448 SKLKEKYEK 2474

 Score = 248 (87.3 bits), Expect = 1.1e-75, Sum P(4) = 1.1e-75
 Identities = 45/49 (91%), Positives = 48/49 (97%), Frame = +2

Query:     1 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWK 49
             GK DP+KPRGKMSSYA+FVQTCREEHKKKHP+ASVNFSEFSKKCSERWK
Sbjct:  1280 GK-DPRKPRGKMSSYAYFVQTCREEHKKKHPEASVNFSEFSKKCSERWK 1423

 Score = 238 (83.8 bits), Expect = 1.1e-75, Sum P(4) = 1.1e-75
 Identities = 44/57 (77%), Positives = 48/57 (84%), Frame = +2

Query:    41 SKKCSERWKTMSAKEKGKFEDMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRP 97
             S  C    KTMSAKEKGKFED+AK DK RYEREM++YIPPKGE KK+FKDPNAPKRP
Sbjct:  1820 SSCCCSSLKTMSAKEKGKFEDLAKLDKVRYEREMRSYIPPKGEKKKRFKDPNAPKRP 1990

 Score = 119 (41.9 bits), Expect = 1.1e-75, Sum P(4) = 1.1e-75
 Identities = 20/55 (36%), Positives = 40/55 (72%), Frame = +1

Query:   154 YEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEE 208
             Y +DI AYR KGK   +    + A+ +   K++++D++D++D+E+++D++DED+E
Sbjct:  2968 YSQDITAYRNKGKVPVS----MPAKAAAPAKDDDDDDDDDDDDEDDDDDDDEDDE 3120

 Score = 106 (37.3 bits), Expect = 2.6e-74, Sum P(4) = 2.6e-74
 Identities = 22/61 (36%), Positives = 38/61 (62%), Frame = +1

Query:   154 YEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDD 213
             Y +DI AYR KGK   +     KA    K        +D++D+++++D+ED+D+++D+DD
Sbjct:  2968 YSQDITAYRNKGKVPVSMPA--KAAAPAK--------DDDDDDDDDDDDEDDDDDDDEDD 3117

Query:   214 E 214
             E
Sbjct:  3118 E 3120

 Score = 79 (27.8 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
 Identities = 18/63 (28%), Positives = 33/63 (52%), Frame = +3

Query:    13 SSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARYER 72
             S++  F    R + K + P  S+   + +KK  E+W  ++A++K  +E  A   K +YE+
Sbjct:  2301 SAFFIFCADFRPQVKGETPGLSIG--DVAKKLGEKWNNLTAEDKVPYEKKASKLKEKYEK 2474

Query:    73 EMK 75
               K
Sbjct:  2475 VNK 2483

 Score = 68 (23.9 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
 Identities = 15/46 (32%), Positives = 23/46 (50%), Frame = +2

Query:    89 KDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIG--DVAKKLGEMW 132
             KDP  P+   S++  F    R + K +HP  S+   + +KK  E W
Sbjct:  1283 KDPRKPRGKMSSYAYFVQTCREEHKKKHPEASVNFSEFSKKCSERW 1420

 Score = 40 (14.1 bits), Expect = 1.7e-20, Sum P(2) = 1.7e-20
 Identities = 13/48 (27%), Positives = 23/48 (47%), Frame = +2

Query:   136 AADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKK 183
             +A +K  +E  A   K +YE+++ +Y     P   KK   K   + K+
Sbjct:  1853 SAKEKGKFEDLAKLDKVRYEREMRSYIP---PKGEKKKRFKDPNAPKR 1987


>AF009343 Mus musculus HMG-like protein (Trf) mRNA, complete cds.
          Length = 1328

  Plus Strand HSPs:

 Score = 699 (246.1 bits), Expect = 1.5e-71, Sum P(2) = 1.5e-71
 Identities = 135/161 (83%), Positives = 144/161 (89%), Frame = +1

Query:    54 KEKGKFEDMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIK 113
             K++G  +   +  +   E + K   PPK ETKKKFKDPNAPKRPPSAFFLFCSEYRPKIK
Sbjct:   298 KKRGNLKIWQRLTRLVMEEK*KPTPPPK-ETKKKFKDPNAPKRPPSAFFLFCSEYRPKIK 474

Query:   114 GEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKG 173
             GEHP LSIGD+AKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKG
Sbjct:   475 GEHPRLSIGDLAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKG 654

Query:   174 VVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             VVKAEKSKKKKEEE+DEEDEEDEEEEE+EEDEDEEEDDDDE
Sbjct:   655 VVKAEKSKKKKEEEDDEEDEEDEEEEEEEEDEDEEEDDDDE 777

 Score = 387 (136.2 bits), Expect = 1.0e-38, Sum P(2) = 1.0e-38
 Identities = 72/80 (90%), Positives = 75/80 (93%), Frame = +3

Query:     7 KPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKAD 66
             + R KMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKAD
Sbjct:   156 RSRDKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKAD 335

Query:    67 KARYEREMKTYIPPKGETKK 86
             KARY REMKTY PPKG+ K+
Sbjct:   336 KARYGREMKTYTPPKGDQKE 395

 Score = 106 (37.3 bits), Expect = 0.00057, Sum P(2) = 0.00057
 Identities = 25/84 (29%), Positives = 41/84 (48%), Frame = +1

Query:     4 DPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMA 63
             DP  P+   S++  F    R + K +HP  S+   + +KK  E W   +A +K  +E  A
Sbjct:   403 DPNAPKRPPSAFFLFCSEYRPKIKGEHPRLSIG--DLAKKLGEMWNNTAADDKQPYEKKA 576

Query:    64 KADKARYEREMKTY-IPPKGETKKK 87
                K +YE+++  Y    K +  KK
Sbjct:   577 AKLKEKYEKDIAAYRAKGKPDAAKK 651

 Score = 82 (28.9 bits), Expect = 0.38, Sum P(2) = 0.32
 Identities = 18/65 (27%), Positives = 32/65 (49%), Frame = +3

Query:    99 SAFFLFCSEYRPKIKGEHPGLSIG--DVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEK 156
             S++  F    R + K +HP  S+   + +KK  E W   +A +K  +E  A   K +Y +
Sbjct:   174 SSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARYGR 353

Query:   157 DIAAY 161
             ++  Y
Sbjct:   354 EMKTY 368

 Score = 52 (18.3 bits), Expect = 1.5e-71, Sum P(2) = 1.5e-71
 Identities = 9/9 (100%), Positives = 9/9 (100%), Frame = +2

Query:     1 GKGDPKKPR 9
             GKGDPKKPR
Sbjct:   140 GKGDPKKPR 166


>D14718 Human chromosomal protein HMG1 related gene.
        Length = 2140

  Plus Strand HSPs:

 Score = 666 (234.4 bits), Expect = 1.0e-64, P = 1.0e-64
 Identities = 127/148 (85%), Positives = 134/148 (90%), Frame = +3

Query:    64 KADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGD 123
             K DKA YERE+KT IPPKGETKKKFKDPNAPKRPPSAFFLFCSEY PKIKGE  GL I D
Sbjct:  1110 KGDKAHYEREVKT*IPPKGETKKKFKDPNAPKRPPSAFFLFCSEYHPKIKGEQLGLPISD 1289

Query:   124 VAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKK 183
             V KKLGEMWNNTAA+DKQP EKKAAKLKEKY+KDIAAY AKGKPDAAKKG +KAEKSKKK
Sbjct:  1290 VVKKLGEMWNNTAAEDKQPCEKKAAKLKEKYKKDIAAY*AKGKPDAAKKGFIKAEKSKKK 1469

Query:   184 KEEEEDEEDEEDEEEEEDEEDEDEEEDD 211
             KEEEEDEEDEED +EE DEEDEDEE+D+
Sbjct:  1470 KEEEEDEEDEEDYDEEVDEEDEDEEDDE 1553

 Score = 346 (121.8 bits), Expect = 6.0e-30, P = 6.0e-30
 Identities = 81/188 (43%), Positives = 108/188 (57%), Frame = +1

Query:     1 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 60
             GKGD KKPRGKMSSYAFFVQTCREEHKK+HPDASVNFSEFSKK SERWKTMSAKEKG+FE
Sbjct:   922 GKGDSKKPRGKMSSYAFFVQTCREEHKKQHPDASVNFSEFSKKGSERWKTMSAKEKGQFE 1101

Query:    61 DMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS 120
             DMAK  +   + + K    PKG  K+  + P  P+     F         K+K  +    
Sbjct:  1102 DMAKVTRPIMKEK*KPKSLPKGRQKRSSRIPMHPRGLLQPFSCSALSITQKLKENNLACP 1281

Query:   121 IGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAY-RAKGKPDAAKKGVVKAEK 179
             +  ++ +  E    T         K+  +   K  K I  +   KG     K+ + + +K
Sbjct:  1282 LV-MS*RNWERCGITLLQKTSSLVKRRLQS*RKNTKRILLHIELKGSLMQQKRDLSRLKK 1458

Query:   180 SKKKKEEEE 188
             ++K+++  +
Sbjct:  1459 ARKRRKRRK 1485

 Score = 90 (31.7 bits), Expect = 1.8, P = 0.83
 Identities = 25/84 (29%), Positives = 39/84 (46%), Frame = +3

Query:     4 DPKKPRGKMSSYAFFVQTCREEHKK-KHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDM 62
             DP  P+   S++  F   C E H K K     +  S+  KK  E W   +A++K   E  
Sbjct:  1188 DPNAPKRPPSAFFLF---CSEYHPKIKGEQLGLPISDVVKKLGEMWNNTAAEDKQPCEKK 1358

Query:    63 AKADKARYEREMKTY-IPPKGETKKK 87
             A   K +Y++++  Y    K +  KK
Sbjct:  1359 AAKLKEKYKKDIAAY*AKGKPDAAKK 1436


>U13881 Drosophila melanogaster DNA-binding protein (DSP1) mRNA, complete
        Length = 1900

  Plus Strand HSPs:

 Score = 540 (190.1 bits), Expect = 2.6e-51, P = 2.6e-51
 Identities = 100/218 (45%), Positives = 148/218 (67%), Frame = +1

Query:     2 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 61
             K D K PRG+M++YA+FVQTCREEHKKKHPD +V F+EFS+KC+ERWKTM  KEK +F +
Sbjct:   700 KADAK-PRGRMTAYAYFVQTCREEHKKKHPDETVIFAEFSRKCAERWKTMVDKEKKRFHE 876

Query:    62 MAKADKARYEREMKTYIPPKG------ETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGE 115
             MA+ DK RYE EM+ Y+PPKG      + +K+ KDPNAPKR  SAFF FC++ R K+K  
Sbjct:   877 MAEKDKQRYEAEMQNYVPPKGALWDRGKKRKQIKDPNAPKRSLSAFFWFCNDERNKVKAL 1056

Query:   116 HPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVV 175
             +P   +GD+AK+LG  W++   + KQ YE  A + K +YE+++  Y+  GK   +   + 
Sbjct:  1057 NPEFGVGDIAKELGRKWSDVDPEVKQKYESMAERDKARYEREMTEYKTSGKIAMSAPSMQ 1236

Query:   176 KAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
              + +++ +K        ++  ++ E++ D+D+ + DDDE
Sbjct:  1237 ASMQAQAQKAALLAARAQQQHQQLEEQHDDDDGDGDDDE 1353

 Score = 529 (186.2 bits), Expect = 3.7e-50, P = 3.7e-50
 Identities = 100/220 (45%), Positives = 148/220 (67%), Frame = +1

Query:     2 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 61
             K D K PRG+M++YA+FVQTCREEHKKKHPD +V F+EFS+KC+ERWKTM  KEK +F +
Sbjct:   700 KADAK-PRGRMTAYAYFVQTCREEHKKKHPDETVIFAEFSRKCAERWKTMVDKEKKRFHE 876

Query:    62 MAKADKARYEREMKTYIPPKG------ETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGE 115
             MA+ DK RYE EM+ Y+PPKG      + +K+ KDPNAPKR  SAFF FC++ R K+K  
Sbjct:   877 MAEKDKQRYEAEMQNYVPPKGALWDRGKKRKQIKDPNAPKRSLSAFFWFCNDERNKVKAL 1056

Query:   116 HPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVV 175
             +P   +GD+AK+LG  W++   + KQ YE  A + K +YE+++  Y+  GK   +   + 
Sbjct:  1057 NPEFGVGDIAKELGRKWSDVDPEVKQKYESMAERDKARYEREMTEYKTSGKIAMSAPSMQ 1236

Query:   176 KAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE-- 214
              + +++ +K        ++  ++ E++ D+D+ + DDDE  
Sbjct:  1237 ASMQAQAQKAALLAARAQQQHQQLEEQHDDDDGDGDDDENQ 1359


>X81456 D.melanogaster mRNA for an open reading frame
        Length = 2852

  Plus Strand HSPs:

 Score = 539 (189.7 bits), Expect = 1.4e-50, P = 1.4e-50
 Identities = 100/218 (45%), Positives = 148/218 (67%), Frame = +2

Query:     2 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 61
             K D K PRG+M++YA+FVQTCREEHKKKHPD +V F+EFS+KC+ERWKTM  KEK +F +
Sbjct:  1238 KADAK-PRGRMTAYAYFVQTCREEHKKKHPDETVIFAEFSRKCAERWKTMVDKEKKRFHE 1414

Query:    62 MAKADKARYEREMKTYIPPKG------ETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGE 115
             MA+ DK RYE EM+ Y+PPKG      + +K+ KDPNAPKR  SAFF FC++ R K+K  
Sbjct:  1415 MAEKDKQRYEAEMQNYVPPKGAVVGRGKKRKQIKDPNAPKRSLSAFFWFCNDERNKVKAL 1594

Query:   116 HPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVV 175
             +P   +GD+AK+LG  W++   + KQ YE  A + K +YE+++  Y+  GK   +   + 
Sbjct:  1595 NPEFGVGDIAKELGRKWSDVDPEVKQKYESMAERDKARYEREMTEYKTSGKIAMSAPSMQ 1774

Query:   176 KAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
              + +++ +K        ++  ++ E++ D+D+ + DDDE
Sbjct:  1775 ASMQAQAQKAALLAAAAQQQHQQLEEQHDDDDGDGDDDE 1891

 Score = 528 (185.9 bits), Expect = 2.2e-49, P = 2.2e-49
 Identities = 100/220 (45%), Positives = 148/220 (67%), Frame = +2

Query:     2 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 61
             K D K PRG+M++YA+FVQTCREEHKKKHPD +V F+EFS+KC+ERWKTM  KEK +F +
Sbjct:  1238 KADAK-PRGRMTAYAYFVQTCREEHKKKHPDETVIFAEFSRKCAERWKTMVDKEKKRFHE 1414

Query:    62 MAKADKARYEREMKTYIPPKG------ETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGE 115
             MA+ DK RYE EM+ Y+PPKG      + +K+ KDPNAPKR  SAFF FC++ R K+K  
Sbjct:  1415 MAEKDKQRYEAEMQNYVPPKGAVVGRGKKRKQIKDPNAPKRSLSAFFWFCNDERNKVKAL 1594

Query:   116 HPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVV 175
             +P   +GD+AK+LG  W++   + KQ YE  A + K +YE+++  Y+  GK   +   + 
Sbjct:  1595 NPEFGVGDIAKELGRKWSDVDPEVKQKYESMAERDKARYEREMTEYKTSGKIAMSAPSMQ 1774

Query:   176 KAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE-- 214
              + +++ +K        ++  ++ E++ D+D+ + DDDE  
Sbjct:  1775 ASMQAQAQKAALLAAAAQQQHQQLEEQHDDDDGDGDDDENQ 1897


>L32954 Rainbow trout HMG-T2 gene exons 1-4, complete cds.
        Length = 1368

  Plus Strand HSPs:

 Score = 227 (79.9 bits), Expect = 3.0e-50, Sum P(3) = 3.0e-50
 Identities = 42/52 (80%), Positives = 44/52 (84%), Frame = +3

Query:     1 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMS 52
             GK DP KP+GK SSYAFFV TCREEHKKKHP  SVNFSEFSKKCSERW+  S
Sbjct:    36 GK-DPNKPKGKTSSYAFFVATCREEHKKKHPGTSVNFSEFSKKCSERWRVSS 188

 Score = 210 (73.9 bits), Expect = 3.0e-50, Sum P(3) = 3.0e-50
 Identities = 49/107 (45%), Positives = 65/107 (60%), Frame = +3

Query:    66 DKARYEREMKTYIPPKGETKKK-----------FKDPN---APKRPP--SAFFLFCSEYR 109
             D  + ERE +T +PPKG  K             F+  N   +    P  SAFF+FC+E+R
Sbjct:   450 DLRQQERERRTPMPPKGHRKYSTYTTIDFCSVLFRFWN*MCSQHSIPNSSAFFVFCAEHR 629

Query:   110 PKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEK 156
              +IK ++PG+ IGD+AK+LG +W      DKQP+E KAAKLKEKYEK
Sbjct:   630 GRIKADNPGMGIGDIAKQLGLLWGKQTPKDKQPHEAKAAKLKEKYEK 770

 Score = 192 (67.6 bits), Expect = 2.3e-48, Sum P(3) = 2.3e-48
 Identities = 37/59 (62%), Positives = 45/59 (76%), Frame = +2

Query:    48 WKTMSAKEKGKFEDMAKADKARYEREMKTYIPPKGETK--KKFKDPNAPKRPPSAFFLF 104
             ++TMSAKEK KFEDMAK DK RY+++MK Y+PPKG     K+ KDPNAPKRPP    L+
Sbjct:   347 FQTMSAKEKVKFEDMAKGDKVRYDKDMKGYVPPKGSKAAGKRKKDPNAPKRPP*VLHLY 523

 Score = 141 (49.6 bits), Expect = 3.0e-50, Sum P(3) = 3.0e-50
 Identities = 26/56 (46%), Positives = 41/56 (73%), Frame = +3

Query:   157 DIAAYRAKGKPDA-AKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDD 211
             D+AAY+AKG   A AK G  +    KK    ++D++D++DEEE++DEE++D+E+DD
Sbjct:   849 DVAAYKAKGGAGATAKSGPGRPAVGKKAAPMDDDDDDDDDEEEDDDEEEDDDEDDD 1016

 Score = 139 (48.9 bits), Expect = 4.9e-50, Sum P(3) = 4.9e-50
 Identities = 28/56 (50%), Positives = 41/56 (73%), Frame = +3

Query:   157 DIAAYRAKGKPDA-AKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDD 212
             D+AAY+AKG   A AK G  +    KK    ++D++D++DEEE++DEE ED++EDDD
Sbjct:   849 DVAAYKAKGGAGATAKSGPGRPAVGKKAAPMDDDDDDDDDEEEDDDEE-EDDDEDDD 1016

 Score = 124 (43.7 bits), Expect = 1.8e-48, Sum P(3) = 1.8e-48
 Identities = 27/58 (46%), Positives = 39/58 (67%), Frame = +3

Query:   157 DIAAYRAKGKPDA-AKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             D+AAY+AKG   A AK G  +    KK    ++D++D++DEEE     D+DEEEDDD++
Sbjct:   849 DVAAYKAKGGAGATAKSGPGRPAVGKKAAPMDDDDDDDDDEEE-----DDDEEEDDDED 1010

 Score = 88 (31.0 bits), Expect = 2.2e-12, Sum P(2) = 2.2e-12
 Identities = 18/46 (39%), Positives = 26/46 (56%), Frame = +3

Query:    89 KDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIG--DVAKKLGEMW 132
             KDPN PK   S++  F +  R + K +HPG S+   + +KK  E W
Sbjct:    39 KDPNKPKGKTSSYAFFVATCREEHKKKHPGTSVNFSEFSKKCSERW 176

 Score = 60 (21.1 bits), Expect = 1.8e-09, Sum P(2) = 1.8e-09
 Identities = 16/64 (25%), Positives = 27/64 (42%), Frame = +3

Query:    13 SSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARYER 72
             +S AFFV       + K  +  +   + +K+    W   + K+K   E  A   K +YE+
Sbjct:   591 NSSAFFVFCAEHRGRIKADNPGMGIGDIAKQLGLLWGKQTPKDKQPHEAKAAKLKEKYEK 770

Query:    73 EMKT 76
                T
Sbjct:   771 VRST 782

 Score = 52 (18.3 bits), Expect = 1.0e-20, Sum P(2) = 1.0e-20
 Identities = 13/43 (30%), Positives = 22/43 (51%), Frame = +2

Query:   131 MWNNTAADDKQPYEKKAAKLKEKYEKDIAAY-RAKGKPDAAKK 172
             ++   +A +K  +E  A   K +Y+KD+  Y   KG   A K+
Sbjct:   344 LFQTMSAKEKVKFEDMAKGDKVRYDKDMKGYVPPKGSKAAGKR 472


>AF003626 Homo sapiens cosmids IM0525, LC1233, Qc3C1, LB1439, Qc12C11 and
          Length = 86,769

  Plus Strand HSPs:

 Score = 245 (86.2 bits), Expect = 1.2e-49, Sum P(3) = 1.2e-49
 Identities = 46/60 (76%), Positives = 50/60 (83%), Frame = +1

Query:    97 PPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEK 156
             P S FFLFCSE+RPKIK  +PG+SIGDVAKKLGEMWNN    +KQPY  KAAKLKEKYEK
Sbjct: 68284 PRSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQPYITKAAKLKEKYEK 68463

 Score = 238 (83.8 bits), Expect = 1.2e-49, Sum P(3) = 1.2e-49
 Identities = 41/48 (85%), Positives = 46/48 (95%), Frame = +2

Query:     2 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWK 49
             KGDPKKP+GKMS+YAFFVQTCREEHKKK+P+  VNF+EFSKKCSERWK
Sbjct: 66767 KGDPKKPKGKMSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWK 66910

 Score = 190 (66.9 bits), Expect = 1.2e-44, Sum P(3) = 1.2e-44
 Identities = 39/59 (66%), Positives = 45/59 (76%), Frame = +3

Query:    40 FSKKCSERWKTMSAKEKGKFEDMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPP 98
             F++ CS   +TMS KEK KF++MAKADK RY+REMK Y P KG  KKK  DPNAPKRPP
Sbjct: 67188 FNESCS--LQTMSGKEKSKFDEMAKADKVRYDREMKDYGPAKGGKKKK--DPNAPKRPP 67352

 Score = 137 (48.2 bits), Expect = 1.2e-49, Sum P(3) = 1.2e-49
 Identities = 30/49 (61%), Positives = 37/49 (75%), Frame = +1

Query:   157 DIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDE 205
             D+A Y++KGK D AK G  K  +   KK EEEDEE+EE+EEEEE+EEDE
Sbjct: 68938 DVADYKSKGKFDGAK-GPAKVAR---KKVEEEDEEEEEEEEEEEEEEDE 69072

 Score = 116 (40.8 bits), Expect = 1.8e-47, Sum P(3) = 1.8e-47
 Identities = 30/56 (53%), Positives = 37/56 (66%), Frame = +1

Query:   157 DIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDD 212
             D+A Y++KGK D AK G  K  +   KK EEEDEE+EE+EEEEE+EEDE       
Sbjct: 68938 DVADYKSKGKFDGAK-GPAKVAR---KKVEEEDEEEEEEEEEEEEEEDE------- 69072

 Score = 114 (40.1 bits), Expect = 2.9e-47, Sum P(3) = 2.9e-47
 Identities = 30/57 (52%), Positives = 37/57 (64%), Frame = +1

Query:   157 DIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDD 213
             D+A Y++KGK D AK G  K  +   KK EEEDEE+EE+EEEEE+EEDE        
Sbjct: 68938 DVADYKSKGKFDGAK-GPAKVAR---KKVEEEDEEEEEEEEEEEEEEDE-------- 69072

 Score = 112 (39.4 bits), Expect = 4.7e-47, Sum P(3) = 4.7e-47
 Identities = 30/58 (51%), Positives = 37/58 (63%), Frame = +1

Query:   157 DIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             D+A Y++KGK D AK G  K  +   KK EEEDEE+EE+EEEEE+EEDE         
Sbjct: 68938 DVADYKSKGKFDGAK-GPAKVAR---KKVEEEDEEEEEEEEEEEEEEDE--------- 69072

 Score = 65 (22.9 bits), Expect = 3.2e-07, Sum P(2) = 3.2e-07
 Identities = 16/60 (26%), Positives = 27/60 (45%), Frame = +1

Query:    13 SSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARYER 72
             S +  F    R + K  +P  S+   + +KK  E W  ++  EK  +   A   K +YE+
Sbjct: 68290 SGFFLFCSEFRPKIKSTNPGISIG--DVAKKLGEMWNNLNDSEKQPYITKAAKLKEKYEK 68463

 Score = 60 (21.1 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
 Identities = 14/45 (31%), Positives = 22/45 (48%), Frame = +2

Query:    90 DPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIG--DVAKKLGEMW 132
             DP  PK   SA+  F    R + K ++P + +   + +KK  E W
Sbjct: 66773 DPKKPKGKMSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERW 66907

 Score = 46 (16.2 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
 Identities = 9/31 (29%), Positives = 14/31 (45%), Frame = +2

Query:   112 IKGEHPGLSIGDVAKKLGEMWNNTAADDKQP 142
             I G HPGL +      L   W+++  +   P
Sbjct: 39650 ILGTHPGLPLSGCNTSLSATWSSSRDEASGP 39742

 Score = 44 (15.5 bits), Expect = 1.7e-29, Sum P(3) = 1.7e-29
 Identities = 15/41 (36%), Positives = 19/41 (46%), Frame = +2

Query:    49 KTMSAKEKGKFEDMAKADKARYEREMKTYIPPKGETKKKFK 89
             +T S K K K  D  K  K   ERE K     + E K++ K
Sbjct: 58361 ETPSQKRK-KERDREKERKKERERERKRETERRKERKRERK 58480

 Score = 41 (14.4 bits), Expect = 3.5e-29, Sum P(3) = 3.5e-29
 Identities = 8/23 (34%), Positives = 13/23 (56%), Frame = +2

Query:    77 YIPPKGETKKKFKDPNAPKRPPS 99
             Y+P + E + + K P+ P   PS
Sbjct: 35276 YLPCQMEEEARIKSPSPPALLPS 35344

 Score = 40 (14.1 bits), Expect = 6.6e-18, Sum P(2) = 6.6e-18
 Identities = 13/35 (37%), Positives = 17/35 (48%), Frame = +3

Query:   151 KEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKE 185
             KEK + D  A   K + D   K    A+  KKKK+
Sbjct: 67224 KEKSKFDEMAKADKVRYDREMKDYGPAKGGKKKKD 67328


>M26110 Bovine high-mobility-group protein (HMG-1) mRNA, 3' end.
        Length = 791

  Plus Strand HSPs:

 Score = 495 (174.2 bits), Expect = 3.6e-46, P = 3.6e-46
 Identities = 95/97 (97%), Positives = 97/97 (100%), Frame = +1

Query:   118 GLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKA 177
             G+SIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKA
Sbjct:    10 GVSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKA 189

Query:   178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             EKSKKKKEEEEDEEDEEDEEEEEDEEDE+EEEDDDDE
Sbjct:   190 EKSKKKKEEEEDEEDEEDEEEEEDEEDEEEEEDDDDE 300


>L06453 Strongylocentrotus purpuratus (clone C) high mobility group 1
        Length = 1755

  Plus Strand HSPs:

 Score = 483 (170.0 bits), Expect = 3.0e-45, P = 3.0e-45
 Identities = 95/194 (48%), Positives = 123/194 (63%), Frame = +2

Query:     4 DPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMA 63
             D  KPRG+MS+YA+FVQ  R EH K HP++ V F+EFSK CS RWK +  K KG F + +
Sbjct:   119 DSSKPRGRMSAYAYFVQDSRAEHGKNHPNSPVRFAEFSKDCSARWKALEEKGKGVFHEKS 298

Query:    64 KADKARYEREMKTYIPPKGETKKKF---KDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS 120
               DK RY+REM++Y PPKGE  K+    KDP+APKR  SAFF+F  E R  IK  HP  S
Sbjct:   299 MRDKVRYDREMQSYKPPKGEKNKRRRRRKDPDAPKRNLSAFFIFSGENRAAIKSVHPNWS 478

Query:   121 IGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKS 180
             +GD+AK+L   W    A +K P++K AAK KE+Y K +A Y+AK KP    K  VK   S
Sbjct:   479 VGDIAKELAVRWRAMTAGEKIPFDKGAAKDKERYIKAMAEYKAKAKP---MKRQVKESSS 649

Query:   181 KKKKEEEEDEEDEEDEE 197
                 +   D+   +D +
Sbjct:   650 SSSSDSSSDDSSSDDSD 700


>X89811 D.melanogaster DNA for SSRP2 gene
        Length = 5713

  Plus Strand HSPs:

 Score = 201 (70.8 bits), Expect = 9.4e-42, Sum P(4) = 9.4e-42
 Identities = 35/48 (72%), Positives = 43/48 (89%), Frame = +1

Query:     2 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWK 49
             K D K PRG+M++YA+FVQTCREEHKKKHPD +V F+EFS+KC+ERWK
Sbjct:  3649 KADAK-PRGRMTAYAYFVQTCREEHKKKHPDETVIFAEFSRKCAERWK 3789

 Score = 144 (50.7 bits), Expect = 9.4e-42, Sum P(4) = 9.4e-42
 Identities = 29/53 (54%), Positives = 37/53 (69%), Frame = +2

Query:    50 TMSAKEKGKFEDMAKADKARYEREMKTYIPPKG------ETKKKFKDPNAPKR 96
             TM  KEK +F +MA+ DK RYE EM+ Y+PPKG      + +K+ KDPNAPKR
Sbjct:  3866 TMVDKEKKRFHEMAEKDKQRYEAEMQNYVPPKGAVVGRGKKRKQIKDPNAPKR 4024

 Score = 140 (49.3 bits), Expect = 9.4e-42, Sum P(4) = 9.4e-42
 Identities = 25/58 (43%), Positives = 38/58 (65%), Frame = +2

Query:    99 SAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEK 156
             SAFF FC++ R K+K  +P   +GD+AK+LG  W++   + KQ YE  A + K +YE+
Sbjct:  4160 SAFFWFCNDERNKVKALNPEFGVGDIAKELGRKWSDVDPEVKQKYESMAERDKARYER 4333

 Score = 94 (33.1 bits), Expect = 0.024, Sum P(2) = 0.024
 Identities = 21/57 (36%), Positives = 31/57 (54%), Frame = +2

Query:    16 AFFVQTCREEHKK-KHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARYER 72
             AFF   C +E  K K  +      + +K+   +W  +  + K K+E MA+ DKARYER
Sbjct:  4163 AFF-WFCNDERNKVKALNPEFGVGDIAKELGRKWSDVDPEVKQKYESMAERDKARYER 4333

 Score = 58 (20.4 bits), Expect = 9.4e-42, Sum P(4) = 9.4e-42
 Identities = 11/58 (18%), Positives = 30/58 (51%), Frame = +1

Query:   157 DIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             ++  Y+  GK   +   +  + +++ +K        ++  ++ E++ D+D+ + DDDE
Sbjct:  4405 EMTEYKTSGKIAMSAPSMQASMQAQAQKAALLAAAAQQQHQQLEEQHDDDDGDGDDDE 4578

 Score = 48 (16.9 bits), Expect = 3.7e-16, Sum P(2) = 3.7e-16
 Identities = 13/42 (30%), Positives = 21/42 (50%), Frame = +2

Query:   144 EKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKE 185
             +K+  +  E  EKD   Y A+ +     KG V   + KK+K+
Sbjct:  3875 DKEKKRFHEMAEKDKQRYEAEMQNYVPPKGAVVG-RGKKRKQ 3997

 Score = 47 (16.5 bits), Expect = 1.3e-40, Sum P(4) = 1.3e-40
 Identities = 11/60 (18%), Positives = 30/60 (50%), Frame = +1

Query:   157 DIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE-- 214
             ++  Y+  GK   +   +  + +++ +K        ++  ++ E++ D+D+ + DDDE  
Sbjct:  4405 EMTEYKTSGKIAMSAPSMQASMQAQAQKAALLAAAAQQQHQQLEEQHDDDDGDGDDDENQ 4584


>Z93931 Human DNA sequence from PAC 438G17 on chromosome 6q22. Contains
        Length = 148,198

  Minus Strand HSPs:

 Score = 264 (92.9 bits), Expect = 3.0e-33, Sum P(2) = 3.0e-33
 Identities = 57/107 (53%), Positives = 71/107 (66%), Frame = -3

Query:     2 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 61
             K DPK+P+GKMS+YAFFVQ  REEHKKK+ +  +NF+EFSK CSERWKTMS KEK KF++
Sbjct: 95804 KVDPKEPKGKMSAYAFFVQMGREEHKKKNLEFPINFTEFSKNCSERWKTMSGKEKSKFDE 95625

Query:    62 MAKADKA------RYEREMK-----TYIPPKGE-TKKKFKDPNAPKR 96
             MAKADK       R + +++     T  PPKG      F   N+  R
Sbjct: 95624 MAKADKYTMIGR*RIKNQLREARRRTLTPPKGHHLDSSFSIQNSATR 95484

 Score = 163 (57.4 bits), Expect = 3.0e-33, Sum P(2) = 3.0e-33
 Identities = 38/70 (54%), Positives = 47/70 (67%), Frame = -1

Query:   126 KKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKE 185
             KKLGEMWNN    +KQPY  K A+LK KYEKD+A  ++KGK D  K G  K      KK 
Sbjct: 95443 KKLGEMWNNLNDSEKQPYITKVAQLK-KYEKDVADCKSKGKFDGPK-GSTKVAW---KKV 95279

Query:   186 EEEDEEDEED 195
             EE+++E+EED
Sbjct: 95278 EEDNKENEED 95249

 Score = 150 (52.8 bits), Expect = 2.5e-21, Sum P(2) = 2.5e-21
 Identities = 32/57 (56%), Positives = 40/57 (70%), Frame = -2

Query:    70 YEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAK 126
             Y+ E+K   P KG  KK   +PNAPKRPPS FFLF SE+  KIK  +P +SIGD++K
Sbjct: 95601 YDWEIKN*EPAKGGKKK---NPNAPKRPPSGFFLFYSEFCHKIKSTNPDISIGDMSK 95440

 Score = 43 (15.1 bits), Expect = 1.1e-20, Sum P(2) = 1.1e-20
 Identities = 10/19 (52%), Positives = 12/19 (63%), Frame = -3

Query:   167 PDAAKKGVVKAEKSKKKKE 185
             P + K GV   +K KKKKE
Sbjct: 43964 PFSRKNGVS*KKKKKKKKE 43908

 Score = 42 (14.8 bits), Expect = 1.3e-20, Sum P(2) = 1.3e-20
 Identities = 8/11 (72%), Positives = 10/11 (90%), Frame = -2

Query:   178 EKSKKKKEEEE 188
             +K KKKK+EEE
Sbjct: 69666 KKKKKKKKEEE 69634

 Score = 42 (14.8 bits), Expect = 1.3e-20, Sum P(2) = 1.3e-20
 Identities = 8/16 (50%), Positives = 12/16 (75%), Frame = -2

Query:   179 KSKKKKEEEEDEEDEE 194
             K K KKE+E ++E +E
Sbjct: 87591 KKKSKKEKERNKERKE 87544

 Score = 42 (14.8 bits), Expect = 4.1e-10, Sum P(2) = 4.1e-10
 Identities = 11/41 (26%), Positives = 20/41 (48%), Frame = -2

Query:     2 KGDPKKPRGKMSSY-AFFVQTCREEHKKKHPDASVNFSEFSK 42
             K +P  P+   S +  F+ + C   HK K  +  ++  + SK
Sbjct: 95556 KKNPNAPKRPPSGFFLFYSEFC---HKIKSTNPDISIGDMSK 95440

 Score = 41 (14.4 bits), Expect = 1.7e-20, Sum P(2) = 1.7e-20
 Identities = 8/10 (80%), Positives = 9/10 (90%), Frame = -2

Query:   178 EKSKKKKEEE 187
             +K KKKKEEE
Sbjct: 69663 KKKKKKKEEE 69634

 Score = 40 (14.1 bits), Expect = 2.2e-20, Sum P(2) = 2.2e-20
 Identities = 7/18 (38%), Positives = 13/18 (72%), Frame = -2

Query:   175 VKAEKSKKKKEEEEDEED 192
             V  +KSKK+KE  ++ ++
Sbjct: 87597 VSKKKSKKEKERNKERKE 87544

 Score = 40 (14.1 bits), Expect = 6.5e-10, Sum P(2) = 6.5e-10
 Identities = 9/21 (42%), Positives = 11/21 (52%), Frame = -3

Query:     70 YEREMKTYIPPKGETKKKFKD 90
              Y RE     P  G ++KKF D
Sbjct: 111818 YRREPLLLAPLSGLSQKKFAD 111756


>X80466 M.musculus HMG1-R-227 gene
        Length = 184

  Plus Strand HSPs:

 Score = 331 (116.5 bits), Expect = 3.7e-28, P = 3.7e-28
 Identities = 61/61 (100%), Positives = 61/61 (100%), Frame = +1

Query:     4 DPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMA 63
             DPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMA
Sbjct:     1 DPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMA 180

Query:    64 K 64
             K
Sbjct:   181 K 183

 Score = 82 (28.9 bits), Expect = 0.28, P = 0.24
 Identities = 18/60 (30%), Positives = 29/60 (48%), Frame = +1

Query:    90 DPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIG--DVAKKLGEMWNNTAADDKQPYEKKA 147
             DP  P+   S++  F    R + K +HP  S+   + +KK  E W   +A +K  +E  A
Sbjct:     1 DPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMA 180


>U22831 Caenorhabditis elegans cosmid F47D12.
        Length = 41,275

  Plus Strand HSPs:

 Score = 203 (71.5 bits), Expect = 1.2e-27, Sum P(4) = 1.2e-27
 Identities = 39/73 (53%), Positives = 51/73 (69%), Frame = +3

Query:     4 DPKKP--RGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 61
             D  KP  RGK S Y FFV+ C EEHKKK+P+ +V  +E SKKCSE+WKTM   EK +F +
Sbjct:    36 DMGKPPVRGKTSPYGFFVKMCYEEHKKKYPNENVQVTEISKKCSEKWKTMVDDEKRRFYE 215

Query:    62 MAKADKARYEREM 74
             +A+ D  RY+ E+
Sbjct:   216 LAQKDAERYQAEV 254

 Score = 133 (46.8 bits), Expect = 1.2e-27, Sum P(4) = 1.2e-27
 Identities = 25/66 (37%), Positives = 40/66 (60%), Frame = +2

Query:    99 SAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDI 158
             SAFF +  + RP+I+  HP   +G VA++LG+MW     + K  YE+KA   K++Y  D+
Sbjct:   608 SAFFFYSQDKRPEIQAGHPDWKVGQVAQELGKMWKLVPQETKDMYEQKAQADKDRYA-DV 784

Query:   159 AAYRAK 164
               ++ K
Sbjct:   785 RIFKRK 802

 Score = 88 (31.0 bits), Expect = 2.3, Sum P(2) = 0.90
 Identities = 20/71 (28%), Positives = 36/71 (50%), Frame = +3

Query:    89 KDPNAPKRPPSAFFL-FCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKA 147
             K P   K  P  FF+  C E   K K  +  + + +++KK  E W     D+K+ + + A
Sbjct:    45 KPPVRGKTSPYGFFVKMCYEEHKK-KYPNENVQVTEISKKCSEKWKTMVDDEKRRFYELA 221

Query:   148 AKLKEKYEKDIA 159
              K  E+Y+ +++
Sbjct:   222 QKDAERYQAEVS 257

 Score = 86 (30.3 bits), Expect = 3.9, Sum P(2) = 0.98
 Identities = 19/58 (32%), Positives = 32/58 (55%), Frame = +2

Query:    13 SSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARY 70
             S++ F+ Q  R E +  HPD  V   + +++  + WK +  + K  +E  A+ADK RY
Sbjct:   608 SAFFFYSQDKRPEIQAGHPDWKVG--QVAQELGKMWKLVPQETKDMYEQKAQADKDRY 775

 Score = 60 (21.1 bits), Expect = 1.1e-16, Sum P(2) = 1.1e-16
 Identities = 16/49 (32%), Positives = 27/49 (55%), Frame = +2

Query:   145 KKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDE 193
             +K+ K+ EK+ K +   R + K +  KK   K+ KSK    +E D+ D+
Sbjct:  6380 RKSLKVSEKWIK-VLTTRCRWKLEYRKKNNKKS-KSKNMTNQENDQTDQ 6520

 Score = 53 (18.7 bits), Expect = 1.2e-27, Sum P(4) = 1.2e-27
 Identities = 14/38 (36%), Positives = 23/38 (60%), Frame = +1

Query:   171 KKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEE 208
             KK V+K +K KKK+  E+   ++  +E  ED  ++ EE
Sbjct:  9766 KKKVLKKQK-KKKRPTEKKTLNKVFDEPTEDSLNKSEE 9876

 Score = 49 (17.2 bits), Expect = 1.6e-15, Sum P(2) = 1.6e-15
 Identities = 17/65 (26%), Positives = 31/65 (47%), Frame = +1

Query:   140 KQPYEKKAA-KLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSK----KKKEEEEDEEDEE 194
             K+P EKK   K+ ++  +D      +       K V+K  K +    + KEE +  ++E 
Sbjct:  9799 KRPTEKKTLNKVFDEPTEDSLNKSEETVNGNNDKRVIKERKKRFFK*RNKEERKSRKNEN 9978

Query:   195 DEEEE 199
             +E E+
Sbjct:  9979 EEREK 9993

 Score = 43 (15.1 bits), Expect = 1.2e-27, Sum P(4) = 1.2e-27
 Identities = 8/12 (66%), Positives = 10/12 (83%), Frame = +3

Query:    85 KKKFKDPNAPKR 96
             K+  KDP+APKR
Sbjct:   384 KRAKKDPHAPKR 419

 Score = 40 (14.1 bits), Expect = 5.9e-25, Sum P(3) = 5.9e-25
 Identities = 9/24 (37%), Positives = 15/24 (62%), Frame = +1

Query:   187 EEDEEDEEDEEEEEDEEDEDEEED 210
             E  EE  EDE + E+E+ ++  E+
Sbjct: 37579 ENLEELREDENKNEEEKQKNGLEN 37650

 Score = 40 (14.1 bits), Expect = 5.9e-25, Sum P(3) = 5.9e-25
 Identities = 9/31 (29%), Positives = 19/31 (61%), Frame = +1

Query:   174 VVKAEKSKKKKEEEEDEEDEEDEEEEEDEED 204
             V   E++ K  E  E+  ++E++ EEE +++
Sbjct: 37546 VENLEEALKICENLEELREDENKNEEEKQKN 37638


>X66077 Z.mays MNB1b mRNA for DNA-binding protein
        Length = 918

  Plus Strand HSPs:

 Score = 308 (108.4 bits), Expect = 2.0e-26, P = 2.0e-26
 Identities = 68/162 (41%), Positives = 95/162 (58%), Frame = +3

Query:    52 SAKEKGKFEDMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPK 111
             SA +  K +  AKAD     +      P KG   K  KDPN PKR PSAFF+F  E+R +
Sbjct:    30 SAMKGAKSKGAAKADAKLAVKSKGAEKPAKGRKGKAGKDPNKPKRAPSAFFVFMEEFRKE 209

Query:   112 IKGEHP-GLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAA 170
              K ++P   S+  V K  G+ W + +  DK PY  KA KLK +Y K IAAY  KG+  AA
Sbjct:   210 FKEKNPKNKSVAAVGKAAGDRWKSLSESDKAPYVAKANKLKLEYNKAIAAYN-KGESTAA 386

Query:   171 KKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDD 213
             KK   K E+   +++EEE ++ + +  +E+DEE  +E+EDDD+
Sbjct:   387 KKAPAKEEE---EEDEEESDKSKSEVNDEDDEEGSEEDEDDDE 506

 Score = 308 (108.4 bits), Expect = 2.0e-26, P = 2.0e-26
 Identities = 72/163 (44%), Positives = 95/163 (58%), Frame = +3

Query:    52 SAKEKGKFEDMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPK 111
             SA +  K +  AKAD     +      P KG   K  KDPN PKR PSAFF+F  E+R +
Sbjct:    30 SAMKGAKSKGAAKADAKLAVKSKGAEKPAKGRKGKAGKDPNKPKRAPSAFFVFMEEFRKE 209

Query:   112 IKGEHP-GLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAA 170
              K ++P   S+  V K  G+ W + +  DK PY  KA KLK +Y K IAAY  KG+  AA
Sbjct:   210 FKEKNPKNKSVAAVGKAAGDRWKSLSESDKAPYVAKANKLKLEYNKAIAAYN-KGESTAA 386

Query:   171 KKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDED--EEEDDDDE 214
             KK   K E      EEE++EE ++ + E  DE+DE+  EE++DDDE
Sbjct:   387 KKAPAKEE------EEEDEEESDKSKSEVNDEDDEEGSEEDEDDDE 506

 Score = 116 (40.8 bits), Expect = 0.0011, P = 0.0011
 Identities = 29/91 (31%), Positives = 49/91 (53%), Frame = +3

Query:     1 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 60
             GK DP KP+   S++  F++  R+E K+K+P  + + +   K   +RWK++S  +K  + 
Sbjct:   138 GK-DPNKPKRAPSAFFVFMEEFRKEFKEKNPK-NKSVAAVGKAAGDRWKSLSESDKAPY- 308

Query:    61 DMAKADKARYEREMKTYIPPKGETKKKFKDP 91
              +AKA+K + E         KGE+    K P
Sbjct:   309 -VAKANKLKLEYNKAIAAYNKGESTAAKKAP 398


>X58282 Maize mRNA for a high mobility group protein
        Length = 885

  Plus Strand HSPs:

 Score = 308 (108.4 bits), Expect = 2.1e-26, P = 2.1e-26
 Identities = 68/162 (41%), Positives = 95/162 (58%), Frame = +1

Query:    52 SAKEKGKFEDMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPK 111
             SA +  K +  AKAD     +      P KG   K  KDPN PKR PSAFF+F  E+R +
Sbjct:    34 SAMKGAKSKGAAKADAKLAVKSKGAEKPAKGRKGKAGKDPNKPKRAPSAFFVFMEEFRKE 213

Query:   112 IKGEHP-GLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAA 170
              K ++P   S+  V K  G+ W + +  DK PY  KA KLK +Y K IAAY  KG+  AA
Sbjct:   214 FKEKNPKNKSVAAVGKAAGDRWKSLSESDKAPYVAKANKLKLEYNKAIAAYN-KGESTAA 390

Query:   171 KKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDD 213
             KK   K E+   +++EEE ++ + +  +E+DEE  +E+EDDD+
Sbjct:   391 KKAPAKEEE---EEDEEESDKSKSEVNDEDDEEGSEEDEDDDE 510

 Score = 308 (108.4 bits), Expect = 2.1e-26, P = 2.1e-26
 Identities = 72/163 (44%), Positives = 95/163 (58%), Frame = +1

Query:    52 SAKEKGKFEDMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPK 111
             SA +  K +  AKAD     +      P KG   K  KDPN PKR PSAFF+F  E+R +
Sbjct:    34 SAMKGAKSKGAAKADAKLAVKSKGAEKPAKGRKGKAGKDPNKPKRAPSAFFVFMEEFRKE 213

Query:   112 IKGEHP-GLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAA 170
              K ++P   S+  V K  G+ W + +  DK PY  KA KLK +Y K IAAY  KG+  AA
Sbjct:   214 FKEKNPKNKSVAAVGKAAGDRWKSLSESDKAPYVAKANKLKLEYNKAIAAYN-KGESTAA 390

Query:   171 KKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDED--EEEDDDDE 214
             KK   K E      EEE++EE ++ + E  DE+DE+  EE++DDDE
Sbjct:   391 KKAPAKEE------EEEDEEESDKSKSEVNDEDDEEGSEEDEDDDE 510

 Score = 116 (40.8 bits), Expect = 0.0011, P = 0.0011
 Identities = 29/91 (31%), Positives = 49/91 (53%), Frame = +1

Query:     1 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 60
             GK DP KP+   S++  F++  R+E K+K+P  + + +   K   +RWK++S  +K  + 
Sbjct:   142 GK-DPNKPKRAPSAFFVFMEEFRKEFKEKNPK-NKSVAAVGKAAGDRWKSLSESDKAPY- 312

Query:    61 DMAKADKARYEREMKTYIPPKGETKKKFKDP 91
              +AKA+K + E         KGE+    K P
Sbjct:   313 -VAKANKLKLEYNKAIAAYNKGESTAAKKAP 402


>X80462 M.musculus HMG1-R-154 gene
        Length = 190

  Plus Strand HSPs:

 Score = 307 (108.1 bits), Expect = 1.3e-25, P = 1.3e-25
 Identities = 57/62 (91%), Positives = 58/62 (93%), Frame = +1

Query:     1 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 60
             GKGDPKKPRGKMSSYA FV+TC EEHKKKHPDASVNFS FSKKCSERWKTMSAKEKGKFE
Sbjct:     4 GKGDPKKPRGKMSSYALFVKTCWEEHKKKHPDASVNFSGFSKKCSERWKTMSAKEKGKFE 183

Query:    61 DM 62
              M
Sbjct:   184 GM 189

 Score = 73 (25.7 bits), Expect = 2.7, P = 0.93
 Identities = 17/57 (29%), Positives = 27/57 (47%), Frame = +1

Query:    90 DPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIG--DVAKKLGEMWNNTAADDKQPYE 144
             DP  P+   S++ LF      + K +HP  S+     +KK  E W   +A +K  +E
Sbjct:    13 DPKKPRGKMSSYALFVKTCWEEHKKKHPDASVNFSGFSKKCSERWKTMSAKEKGKFE 183


>AC002526 Human PAC clone DJ0558L21 from Xq23, complete sequence.
          Length = 134,580

  Plus Strand HSPs:

 Score = 250 (88.0 bits), Expect = 1.3e-24, Sum P(2) = 1.3e-24
 Identities = 59/125 (47%), Positives = 71/125 (56%), Frame = +3

Query:      2 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 61
              KGD + P+GKMS+  FFV+TCREEHKK  PD  V+F    K    R +    KEK     
Sbjct: 123669 KGDLRNPKGKMSANVFFVKTCREEHKKLKPDGPVSFLRIFKSYL-RGERQFGKEKINLIK 123845

Query:     62 MAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSI 121
                +  K   + EMK Y P KG  KKK +   A   P S FFLFCSE+ PKIK   PG+S+
Sbjct: 123846 SQRWVKDA-DWEMKDYDPAKGHKKKKVR--KAC*SPASEFFLFCSEFYPKIKSPKPGVSV 124016

Query:    122 GDVAK 126
               DV K
Sbjct: 124017 ADVTK 124031

 Score = 94 (33.1 bits), Expect = 1.3e-24, Sum P(2) = 1.3e-24
 Identities = 20/50 (40%), Positives = 32/50 (64%), Frame = +1

Query:    139 DKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVK-AEKSKKKKEEE 187
              +KQ    KA KLKEKYEKD+A +++KGK   +K    +  EK ++++  +
Sbjct: 124069 EKQSCITKAVKLKEKYEKDVADFKSKGKFGGSKDPTHRYLEKGRRRQRRQ 124218

 Score = 70 (24.6 bits), Expect = 4.3e-22, Sum P(2) = 4.3e-22
 Identities = 14/22 (63%), Positives = 18/22 (81%), Frame = +2

Query:    184 KEEEEDEEDEEDEEEEEDEEDE 205
              K+ EED+ED+E+EEE   EEDE
Sbjct: 124190 KKVEEDKEDKEEEEEMLGEEDE 124255

 Score = 63 (22.2 bits), Expect = 2.3e-21, Sum P(2) = 2.3e-21
 Identities = 14/22 (63%), Positives = 18/22 (81%), Frame = +2

Query:    184 KEEEEDEEDEEDEEE---EEDE 202
              K+ EED+ED+E+EEE   EEDE
Sbjct: 124190 KKVEEDKEDKEEEEEMLGEEDE 124255

 Score = 58 (20.4 bits), Expect = 7.6e-21, Sum P(2) = 7.6e-21
 Identities = 12/21 (57%), Positives = 15/21 (71%), Frame = +2

Query:    176 KAEKSKKKKEEEEDEEDEEDE 196
              K E+ K+ KEEEE+   EEDE
Sbjct: 124193 KVEEDKEDKEEEEEMLGEEDE 124255

 Score = 55 (19.4 bits), Expect = 1.6e-20, Sum P(2) = 1.6e-20
 Identities = 16/45 (35%), Positives = 26/45 (57%), Frame = +2

Query:    167 PDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDD 211
              P  + K  + A+K+      ++ EED+ED+EEEE+   E   ED+
Sbjct: 124130 PTLSLKESLVAQKTPLTVTWKKVEEDKEDKEEEEEMLGE---EDE 124255

 Score = 53 (18.7 bits), Expect = 2.5e-20, Sum P(2) = 2.5e-20
 Identities = 9/19 (47%), Positives = 16/19 (84%), Frame = +2

Query:    196 EEEEEDEEDEDEEEDDDDE 214
              EE++ED+E+E+E   ++DE
Sbjct: 124199 EEDKEDKEEEEEMLGEEDE 124255

 Score = 51 (18.0 bits), Expect = 4.1e-20, Sum P(2) = 4.1e-20
 Identities = 16/46 (34%), Positives = 26/46 (56%), Frame = +2

Query:    167 PDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDD 212
              P  + K  + A+K+      ++ EED+ED+EEEE    E   E+D+
Sbjct: 124130 PTLSLKESLVAQKTPLTVTWKKVEEDKEDKEEEE----EMLGEEDE 124255


>Z11540 T.aestivum mRNA for high mobility group protein (HMGW)
        Length = 923

  Plus Strand HSPs:

 Score = 289 (101.7 bits), Expect = 2.1e-24, P = 2.1e-24
 Identities = 69/159 (43%), Positives = 96/159 (60%), Frame = +2

Query:    56 KG-KFEDMAKADKARYEREMKTYIPP--KGETKKKFKDPNAPKRPPSAFFLFCSEYRPKI 112
             KG K +  AKAD A+   + K    P  KG+  K  KDPN PKR PSAFF+F  E+R + 
Sbjct:    80 KGAKSKGAAKAD-AKLAVKSKGAEKPAAKGKKGKAGKDPNKPKRAPSAFFVFMGEFREEF 256

Query:   113 KGEHP-GLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAK 171
             K ++P   S+  V K  GE W + +  +K PY  KA KLK +Y K IAAY  KG+  AA 
Sbjct:   257 KQKNPKNKSVAAVGKAAGERWKSLSESEKAPYVAKANKLKGEYNKAIAAYN-KGESAAA- 430

Query:   172 KGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
                 K   +K+ +EE+E+E D+   E  +D++DE  +ED+DD+
Sbjct:   431 -AAPKKAAAKEVEEEDEEESDKSKSEINDDDDDEGSDEDEDDD 556

 Score = 118 (41.5 bits), Expect = 0.00066, P = 0.00066
 Identities = 29/84 (34%), Positives = 44/84 (52%), Frame = +2

Query:     1 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 60
             GK DP KP+   S++  F+   REE K+K+P  + + +   K   ERWK++S  EK  + 
Sbjct:   182 GK-DPNKPKRAPSAFFVFMGEFREEFKQKNPK-NKSVAAVGKAAGERWKSLSESEKAPYV 355

Query:    61 DMAKADKARYEREMKTYIPPKGET 84
               A   K  Y + +  Y   KGE+
Sbjct:   356 AKANKLKGEYNKAIAAY--NKGES 421


>Y14071 Arabidopsis thaliana mRNA for HMG alpha protein
        Length = 846

  Plus Strand HSPs:

 Score = 281 (98.9 bits), Expect = 1.6e-23, P = 1.6e-23
 Identities = 68/170 (40%), Positives = 97/170 (57%), Frame = +1

Query:    49 KTMSAKEKGKFEDMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEY 108
             K  + KE  K  D  K  K +   E  T    + E K K KDPN PKR PSAFF+F  ++
Sbjct:    79 KVKTTKEALKPVDDRKVGKRKAPAEKPTKRETRKEKKAK-KDPNKPKRAPSAFFVFLEDF 255

Query:   109 RPKIKGEHPGL-SIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRA---K 164
             R   K E+P + ++  V K  G+ W + +  +K PYE+KAAK K +YEK + AY     +
Sbjct:   256 RVTFKKENPNVKAVSAVGKAGGQKWKSMSQAEKAPYEEKAAKRKAEYEKQMDAYNKNLEE 435

Query:   165 GKPDAAKKGVVKAEKSKKKKEEE--EDE---EDEEDEEEEEDEEDEDEEED 210
             G  ++ K      ++ +   EEE  E E   +DEE+EEEE+D++D+DEEED
Sbjct:   436 GSDESEKSRSEINDEDEASGEEELLEKEAAGDDEEEEEEEDDDDDDDEEED 588

 Score = 281 (98.9 bits), Expect = 1.6e-23, P = 1.6e-23
 Identities = 66/170 (38%), Positives = 98/170 (57%), Frame = +1

Query:    49 KTMSAKEKGKFEDMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEY 108
             K  + KE  K  D  K  K +   E  T    + E K K KDPN PKR PSAFF+F  ++
Sbjct:    79 KVKTTKEALKPVDDRKVGKRKAPAEKPTKRETRKEKKAK-KDPNKPKRAPSAFFVFLEDF 255

Query:   109 RPKIKGEHPGL-SIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRA---K 164
             R   K E+P + ++  V K  G+ W + +  +K PYE+KAAK K +YEK + AY     +
Sbjct:   256 RVTFKKENPNVKAVSAVGKAGGQKWKSMSQAEKAPYEEKAAKRKAEYEKQMDAYNKNLEE 435

Query:   165 GKPDAAK-KGVVKAEKSKKKKEEEEDEE---DEEDEEEEEDEEDEDEEEDD 211
             G  ++ K +  +  E     +EE  ++E   D+E+EEEEED++D+D+EE+D
Sbjct:   436 GSDESEKSRSEINDEDEASGEEELLEKEAAGDDEEEEEEEDDDDDDDEEED 588

 Score = 155 (54.6 bits), Expect = 2.3e-09, P = 2.3e-09
 Identities = 57/177 (32%), Positives = 86/177 (48%), Frame = +1

Query:    49 KTMSAKEKGKFEDMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAF-FL--FC 105
             K  + KE  K  D  K  K +   E  T    + E K K       + P + F FL  F 
Sbjct:    79 KVKTTKEALKPVDDRKVGKRKAPAEKPTKRETRKEKKAKKDPNKPKRAPSAFFVFLEDFR 258

Query:   106 SEYR---PKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYR 162
               ++   P +K      ++  V K  G+ W + +  +K PYE+KAAK K +YEK + AY 
Sbjct:   259 VTFKKENPNVK------AVSAVGKAGGQKWKSMSQAEKAPYEEKAAKRKAEYEKQMDAYN 420

Query:   163 A---KGKPDAAKKGVVKAEKSKKKKEEE--EDE---EDEEDEEEEEDEEDEDEEE----- 209
                 +G  ++ K      ++ +   EEE  E E   +DEE+EEEE+D++D+DEEE     
Sbjct:   421 KNLEEGSDESEKSRSEINDEDEASGEEELLEKEAAGDDEEEEEEEDDDDDDDEEED*IRD 600

Query:   210 --- 209
                
Sbjct:   601 RNQ 609

 Score = 132 (46.5 bits), Expect = 1.1e-05, P = 1.1e-05
 Identities = 27/76 (35%), Positives = 42/76 (55%), Frame = +1

Query:     2 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 61
             K DP KP+   S++  F++  R   KK++P+     S   K   ++WK+MS  EK  +E+
Sbjct:   193 KKDPNKPKRAPSAFFVFLEDFRVTFKKENPNVKA-VSAVGKAGGQKWKSMSQAEKAPYEE 369

Query:    62 MAKADKARYEREMKTY 77
              A   KA YE++M  Y
Sbjct:   370 KAAKRKAEYEKQMDAY 417


>Z71255 S.cerevisiae chromosome XVI 165536 bp sequence, cen rightwards.
        Length = 165,536

  Plus Strand HSPs:

 Score = 114 (40.1 bits), Expect = 0.0040, P = 0.0040
 Identities = 31/139 (22%), Positives = 68/139 (48%), Frame = +3

Query:     70 YEREMKTYIPPKGETKKKFKDPNA--PK--RPPSAFFLFCSEYRPKIKGEHP--GLSI-- 121
              Y R+   +   K   ++   +P +  PK  RP +AF LF   Y   +  E    G+ I  
Sbjct: 149259 YSRKY*YFFTQKNAVRQSTMNPKSSTPKIPRPKNAFILFRQHYHRILIDEWTAQGVEIPH 149438

Query:    122 -GDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKS 180
                +++K +G  W     +DK  +E  A K K ++E+    Y+ K    + KK ++  E  
Sbjct: 149439 NSNISKIIGTKWKGLQPEDKAHWENLAEKEKLEHERKYPEYKYKPVRKSKKKQLLLKEIE 149618

Query:    181 KKKKEEEEDEEDEEDEEEE 199
              +++++++++++ ++  + +
Sbjct: 149619 QQQQQQQKEQQQQKQSQPQ 149675

 Score = 110 (38.7 bits), Expect = 0.011, P = 0.011
 Identities = 36/139 (25%), Positives = 70/139 (50%), Frame = +3

Query:     70 YEREMKTYIPPKGETKKKFKDPNA--PK--RPPSAFFLFCSEYRPKIKGEHP--GLSI-- 121
              Y R+   +   K   ++   +P +  PK  RP +AF LF   Y   +  E    G+ I  
Sbjct: 149259 YSRKY*YFFTQKNAVRQSTMNPKSSTPKIPRPKNAFILFRQHYHRILIDEWTAQGVEIPH 149438

Query:    122 -GDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKS 180
                +++K +G  W     +DK  +E  A K K ++E+    Y  K KP      V K++K 
Sbjct: 149439 NSNISKIIGTKWKGLQPEDKAHWENLAEKEKLEHERKYPEY--KYKP------VRKSKKK 149594

Query:    181 KKKKEEEEDEEDEEDEEEEEDEEDEDE 207
              +   +E E ++ ++ +E+++ ++ + +
Sbjct: 149595 QLLLKEIEQQQQQQQKEQQQQKQSQPQ 149675

 Score = 45 (15.8 bits), Expect = 0.054, Sum P(2) = 0.053
 Identities = 16/50 (32%), Positives = 24/50 (48%), Frame = +2

Query:    11 KMSSYAFFVQT---CREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKG 57
             K+ S AF V     C  +  ++ PD  V+ S+F     E  K+ S + KG
Sbjct: 52760 KVCS*AFVVTANAFCSADCHERIPDTRVSKSQFISAHCENLKSSS*QIKG 52909

 Score = 41 (14.4 bits), Expect = 0.14, Sum P(2) = 0.13
 Identities = 10/24 (41%), Positives = 13/24 (54%), Frame = +1

Query:    24 EEHKKKHPDASVNFSEFSKKCSER 47
             E H + H DA V   EFS++   R
Sbjct: 47494 EPHSR-HTDACV*SDEFSRRSCNR 47562

 Score = 40 (14.1 bits), Expect = 0.17, Sum P(2) = 0.16
 Identities = 5/22 (22%), Positives = 17/22 (77%), Frame = +1

Query:    53 AKEKGKFEDMAKADKARYEREM 74
             A ++G+F ++ K +K++ ++++
Sbjct: 14596 AADQGRFVNITKVEKSKEDKDI 14661

  Minus Strand HSPs:

 Score = 206 (72.5 bits), Expect = 4.7e-23, Sum P(2) = 4.7e-23
 Identities = 41/90 (45%), Positives = 54/90 (60%), Frame = -3

Query:     74 MKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWN 133
              M T   PK  T +K KDPNAPKR  SA+  F +E R  ++ E+P ++ G V KKLGE W 
Sbjct: 135597 MVTPREPKKRTTRKKKDPNAPKRALSAYMFFANENRDIVRSENPDITFGQVGKKLGEKWK 135418

Query:    134 NTAADDKQPYEKKAAKLKEKYEKDIAAYRA 163
                  ++KQPYE KA   K++YE +   Y A
Sbjct: 135417 ALTPEEKQPYEAKAQADKKRYESEKELYNA 135328

 Score = 152 (53.5 bits), Expect = 9.1e-16, Sum P(2) = 9.1e-16
 Identities = 29/76 (38%), Positives = 45/76 (59%), Frame = -3

Query:      2 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 61
              K DP  P+  +S+Y FF    R+  + ++PD  + F +  KK  E+WK ++ +EK  +E 
Sbjct: 135555 KKDPNAPKRALSAYMFFANENRDIVRSENPD--ITFGQVGKKLGEKWKALTPEEKQPYEA 135382

Query:     62 MAKADKARYEREMKTY 77
               A+ADK RYE E + Y
Sbjct: 135381 KAQADKKRYESEKELY 135334

 Score = 124 (43.7 bits), Expect = 4.7e-23, Sum P(2) = 4.7e-23
 Identities = 20/52 (38%), Positives = 39/52 (75%), Frame = -3

Query:   162 RAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDD 213
             +  G  D       + E+ ++++EEEE+EE+EE+EE+EE+E++E++++D+DD
Sbjct:  6438 KTSGNEDNGDDDEEEEEEEEEEEEEEEEEEEEEEEEKEEEEKEEEQQQDEDD 6283

 Score = 122 (42.9 bits), Expect = 7.6e-23, Sum P(2) = 7.6e-23
 Identities = 22/37 (59%), Positives = 31/37 (83%), Frame = -3

Query:   178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             E+ ++++EEEE+EE+EE+EEEEE EE+E EEE   DE
Sbjct:  6399 EEEEEEEEEEEEEEEEEEEEEEEKEEEEKEEEQQQDE 6289

 Score = 120 (42.2 bits), Expect = 1.2e-22, Sum P(2) = 1.2e-22
 Identities = 19/37 (51%), Positives = 34/37 (91%), Frame = -3

Query:   178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             E+ ++++EEEE+EE+EE+EEE+E+EE E+E++ D+D+
Sbjct:  6393 EEEEEEEEEEEEEEEEEEEEEKEEEEKEEEQQQDEDD 6283

 Score = 118 (41.5 bits), Expect = 2.0e-22, Sum P(2) = 2.0e-22
 Identities = 21/55 (38%), Positives = 40/55 (72%), Frame = -3

Query:   162 RAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDD--E 214
             +  G  D       + E+ ++++EEEE+EE+EE+EE+EE+E++E++++D+DD  E
Sbjct:  6438 KTSGNEDNGDDDEEEEEEEEEEEEEEEEEEEEEEEEKEEEEKEEEQQQDEDDSNE 6274

 Score = 114 (40.1 bits), Expect = 5.2e-22, Sum P(2) = 5.2e-22
 Identities = 19/40 (47%), Positives = 33/40 (82%), Frame = -3

Query:   175 VKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             VK   ++   +++E+EE+EE+EEEEE+EE+E+EEE++ +E
Sbjct:  6441 VKTSGNEDNGDDDEEEEEEEEEEEEEEEEEEEEEEEEKEE 6322

 Score = 109 (38.4 bits), Expect = 1.7e-21, Sum P(2) = 1.7e-21
 Identities = 18/39 (46%), Positives = 32/39 (82%), Frame = -3

Query:   176 KAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             K + S  +   ++DEE+EE+EEEEE+EE+E+EEE+++++
Sbjct:  6444 KVKTSGNEDNGDDDEEEEEEEEEEEEEEEEEEEEEEEEK 6328

 Score = 91 (32.0 bits), Expect = 1.3e-19, Sum P(2) = 1.3e-19
 Identities = 20/67 (29%), Positives = 40/67 (59%), Frame = -3

Query:   162 RAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDD-------- 213
             +  G  D       + E+ ++++EEEE+EE+EE+EE+EE+E++E++++D+DD        
Sbjct:  6438 KTSGNEDNGDDDEEEEEEEEEEEEEEEEEEEEEEEEKEEEEKEEEQQQDEDDSNEVNGLE 6259

Query:   214 ------E 214
                   +
Sbjct:  6258 KGGDSND 6238

 Score = 57 (20.1 bits), Expect = 4.5e-16, Sum P(2) = 4.5e-16
 Identities = 14/47 (29%), Positives = 29/47 (61%), Frame = -3

Query:   178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDE--------------EED 210
             E+ ++++EEEE EE+E++EE+++DE+D +E              + +
Sbjct:  6363 EEEEEEEEEEEKEEEEKEEEQQQDEDDSNEVNGLEKGGDSNDSTKNN 6223

 Score = 53 (18.7 bits), Expect = 1.2e-15, Sum P(2) = 1.2e-15
 Identities = 10/35 (28%), Positives = 17/35 (48%), Frame = -3

Query:   175 VKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEE 209
             VK + S K+     DE++E +    +   D D E+
Sbjct:  7212 VKLDLSSKELNTSSDEDNESEGNTTDSSSDSDSED 7108

 Score = 51 (18.0 bits), Expect = 3.2e-08, Sum P(2) = 3.2e-08
 Identities = 15/58 (25%), Positives = 31/58 (53%), Frame = -3

Query:   146 KAAKLKEKY-EKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEE 203
             K  K+++KY ++D      + +     KG+ K ++  +KKEE    E  ED + + +++
Sbjct:  6033 KLKKIQKKYADQDETERLLRLEALGTLKGIEKQQQ--RKKEEIMKREVREDRKNKREKQ 5863

 Score = 50 (17.6 bits), Expect = 4.0e-08, Sum P(2) = 4.0e-08
 Identities = 14/48 (29%), Positives = 21/48 (43%), Frame = -1

Query:   141 QPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEE 188
             +P E +   +  K +K     + K K    KK   K +K KKKK   +
Sbjct:  6437 KPVEMRIMVMMTKKKKKKKRKKKKKKKKKKKKKKKKKKKKKKKKSNSK 6294

 Score = 48 (16.9 bits), Expect = 3.9e-15, Sum P(2) = 3.9e-15
 Identities = 9/51 (17%), Positives = 32/51 (62%), Frame = -1

Query:   161 YRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDD 211
             +  K KP   +  V+  +K KKKK +++ ++ ++ +++++ ++ + +++ +
Sbjct:  6452 FYGK*KPVEMRIMVMMTKKKKKKKRKKKKKKKKKKKKKKKKKKKKKKKKSN 6300

 Score = 46 (16.2 bits), Expect = 6.2e-15, Sum P(2) = 6.2e-15
 Identities = 9/12 (75%), Positives = 10/12 (83%), Frame = -2

Query:   191 EDEEDEEEEEDE 202
             EDE+ EEEEE E
Sbjct: 20434 EDEDGEEEEEPE 20399

 Score = 46 (16.2 bits), Expect = 6.2e-15, Sum P(2) = 6.2e-15
 Identities = 12/39 (30%), Positives = 17/39 (43%), Frame = -3

Query:   175 VKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDD 213
             VK + S K+     DE    D E E +  D   + D +D
Sbjct:  7212 VKLDLSSKELNTSSDE----DNESEGNTTDSSSDSDSED 7108

 Score = 46 (16.2 bits), Expect = 6.2e-15, Sum P(2) = 6.2e-15
 Identities = 11/41 (26%), Positives = 18/41 (43%), Frame = -3

Query:   175 VKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEE--EDDDD 213
             VK + S K+     DE++E +    +   D D E  E   +
Sbjct:  7212 VKLDLSSKELNTSSDEDNESEGNTTDSSSDSDSEDMESSKE 7090

 Score = 45 (15.8 bits), Expect = 7.9e-15, Sum P(2) = 7.9e-15
 Identities = 9/17 (52%), Positives = 12/17 (70%), Frame = -2

Query:   194 EDEEEEEDEEDEDEEED 210
             EDE+ EE+EE E +  D
Sbjct: 20434 EDEDGEEEEEPEIQNGD 20384

 Score = 44 (15.5 bits), Expect = 1.0e-14, Sum P(2) = 1.0e-14
 Identities = 11/40 (27%), Positives = 21/40 (52%), Frame = -1

Query:   155 EKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEE 194
             E  I     K K    +K   K +K KKKK++++ ++ ++
Sbjct:  6428 EMRIMVMMTKKKKKKKRKKKKKKKKKKKKKKKKKKKKKKK 6309

 Score = 43 (15.1 bits), Expect = 1.3e-14, Sum P(2) = 1.3e-14
 Identities = 8/16 (50%), Positives = 12/16 (75%), Frame = -2

Query:   194 EDEEEEEDEEDEDEEE 209
             +D  E+ED E+E+E E
Sbjct: 20446 DDVYEDEDGEEEEEPE 20399

 Score = 42 (14.8 bits), Expect = 1.6e-14, Sum P(2) = 1.6e-14
 Identities = 17/64 (26%), Positives = 24/64 (37%), Frame = -3

Query:   155 EKDIAAYRAKGKPDAAKKGV---VKAEKSKKKKEEEEDE-EDEEDEEEEEDEEDEDEEED 210
             EK I + + KG   A    +   +K  K   K +    E     DE+ E +    D   D
Sbjct:  7302 EKLIKSEQKKGNRIAQLLNLPLNLKQNKISVKLDLSSKELNTSSDEDNESEGNTTDSSSD 7123

Query:   211 DDDE 214
              D E
Sbjct:  7122 SDSE 7111

 Score = 40 (14.1 bits), Expect = 2.6e-14, Sum P(2) = 2.6e-14
 Identities = 7/12 (58%), Positives = 10/12 (83%), Frame = -2

Query:   200 EDEEDEDEEEDD 211
             EDE+ E+EEE +
Sbjct: 20434 EDEDGEEEEEPE 20399

 Score = 40 (14.1 bits), Expect = 2.6e-14, Sum P(2) = 2.6e-14
 Identities = 7/12 (58%), Positives = 10/12 (83%), Frame = -2

Query:   203 EDEDEEEDDDDE 214
             EDED EE+++ E
Sbjct: 20434 EDEDGEEEEEPE 20399

 Score = 40 (14.1 bits), Expect = 2.6e-14, Sum P(2) = 2.6e-14
 Identities = 10/36 (27%), Positives = 19/36 (52%), Frame = -2

Query:   177 AEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEE--D 210
             +++S    E+EE + D    E+ +++  E EE   D
Sbjct: 83305 SQESVPGNEKEEPQNDASTTEKNKEKSTESEEYSID 83198

 Score = 40 (14.1 bits), Expect = 0.010, Sum P(2) = 0.010
 Identities = 10/27 (37%), Positives = 15/27 (55%), Frame = -3

Query:    18 FVQTCREEHKKK--HPDASVNFSEFSKK 43
             F++TC  +H K+       +N S  SKK
Sbjct: 35979 FIETCHPKHLKRGTKEQEDIN-SSTSKK 35899

 Score = 40 (14.1 bits), Expect = 0.010, Sum P(2) = 0.010
 Identities = 8/32 (25%), Positives = 17/32 (53%), Frame = -2

Query:     9 RGKMSSYAFFVQTCRE--EHKKKHPDASVNFS 38
             +G +S+ +F    C    +H+K  P  ++N +
Sbjct: 60988 KGTISTESFAALVCTRSVKHRKSFPTETLNMN 60893


>U39747 Ipomoea nil high mobility group protein 2 HMG2 mRNA, complete cds.
        Length = 835

  Plus Strand HSPs:

 Score = 269 (94.7 bits), Expect = 3.0e-22, P = 3.0e-22
 Identities = 58/145 (40%), Positives = 85/145 (58%), Frame = +3

Query:    64 KADKARYEREMKTYIPPKG-ETKKK---FKDPNAPKRPPSAFFLFCSEYRPKIKGEHPG- 118
             K  K++ + + K  +  +G ETKK     KDPN PKRPPSAFF+F  ++R   K +HP  
Sbjct:   144 KGGKSKAKSDNKLAVKKRGCETKKSKKSVKDPNKPKRPPSAFFVFMEDFRKTYKEKHPNN 323

Query:   119 LSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAE 178
              S+  V K  G+ W      +K P+  KA K K++YEK + AY  K   +AA +     E
Sbjct:   324 KSVAAVGKAGGDKWKQLTDAEKAPFIAKAEKRKQEYEKSMQAYNRKQAGEAADE----EE 491

Query:   179 KSKKKKEEEEDEEDEEDEEEEEDEEDEDE 207
               K + E  +DEEDE+   E++D++D+DE
Sbjct:   492 SDKSRSEVNDDEEDEDGSAEDDDDDDDDE 578

 Score = 260 (91.5 bits), Expect = 2.7e-21, P = 2.7e-21
 Identities = 63/151 (41%), Positives = 87/151 (57%), Frame = +3

Query:    64 KADKARYEREMKTYIPPKG-ETKKK---FKDPNAPKRPPSAFFLFCSEYRPKIKGEHPG- 118
             K  K++ + + K  +  +G ETKK     KDPN PKRPPSAFF+F  ++R   K +HP  
Sbjct:   144 KGGKSKAKSDNKLAVKKRGCETKKSKKSVKDPNKPKRPPSAFFVFMEDFRKTYKEKHPNN 323

Query:   119 LSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAE 178
              S+  V K  G+ W      +K P+  KA K K++YEK + AY  K   +AA +     E
Sbjct:   324 KSVAAVGKAGGDKWKQLTDAEKAPFIAKAEKRKQEYEKSMQAYNRKQAGEAADE-----E 488

Query:   179 KSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             +S K + E  D  DEEDE    D   ED+++DDDDE
Sbjct:   489 ESDKSRSEVND--DEEDE----DGSAEDDDDDDDDE 578

 Score = 118 (41.5 bits), Expect = 0.00058, P = 0.00058
 Identities = 23/74 (31%), Positives = 42/74 (56%), Frame = +3

Query:     4 DPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMA 63
             DP KP+   S++  F++  R+ +K+KHP+ + + +   K   ++WK ++  EK  F   A
Sbjct:   234 DPNKPKRPPSAFFVFMEDFRKTYKEKHPN-NKSVAAVGKAGGDKWKQLTDAEKAPFIAKA 410

Query:    64 KADKARYEREMKTY 77
             +  K  YE+ M+ Y
Sbjct:   411 EKRKQEYEKSMQAY 452


>Z50799 H.vulgare mRNA for HMG1/2-like protein.
        Length = 974

  Plus Strand HSPs:

 Score = 263 (92.6 bits), Expect = 1.1e-21, P = 1.1e-21
 Identities = 63/157 (40%), Positives = 89/157 (56%), Frame = +2

Query:    56 KG-KFEDMAKADKARYEREMKTYIPP-KGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIK 113
             KG K +  AKAD     +      P  KG+  K  KDPN PKR PSAFF+F  E+R + K
Sbjct:    92 KGAKSKGAAKADTKLAVKSKGAEKPAAKGKKGKAGKDPNKPKRAPSAFFVFMGEFREEFK 271

Query:   114 GEHP-GLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKK 172
              ++P   S+  V K  GE W + +  +K P+  KA KLK +Y K IA+Y  KG+   A  
Sbjct:   272 QKNPKNKSVAAVGKAAGERWKSLSESEKAPFVAKANKLKGEYNKAIASYN-KGESTTAAP 448

Query:   173 GVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDD 212
                K   SK+ +EE+E+E D+   E  +D++DE  +E +D
Sbjct:   449 ---KKASSKEVEEEDEEESDKSKSEINDDDDDEGSDEAED 559

 Score = 263 (92.6 bits), Expect = 1.1e-21, P = 1.1e-21
 Identities = 64/159 (40%), Positives = 89/159 (55%), Frame = +2

Query:    56 KG-KFEDMAKADKARYEREMKTYIPP-KGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIK 113
             KG K +  AKAD     +      P  KG+  K  KDPN PKR PSAFF+F  E+R + K
Sbjct:    92 KGAKSKGAAKADTKLAVKSKGAEKPAAKGKKGKAGKDPNKPKRAPSAFFVFMGEFREEFK 271

Query:   114 GEHP-GLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKK 172
              ++P   S+  V K  GE W + +  +K P+  KA KLK +Y K IA+Y  KG+   A  
Sbjct:   272 QKNPKNKSVAAVGKAAGERWKSLSESEKAPFVAKANKLKGEYNKAIASYN-KGESTTA-- 442

Query:   173 GVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
                 A K    KE EE++E+E D+ + E  +D+D+E  D+ E
Sbjct:   443 ----APKKASSKEVEEEDEEESDKSKSEINDDDDDEGSDEAE 556

 Score = 234 (82.4 bits), Expect = 1.3e-18, P = 1.3e-18
 Identities = 64/159 (40%), Positives = 85/159 (53%), Frame = +2

Query:    56 KG-KFEDMAKADKARYEREMKTYIPP-KGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIK 113
             KG K +  AKAD     +      P  KG+  K  KDPN PKR PSAFF+F  E+R + K
Sbjct:    92 KGAKSKGAAKADTKLAVKSKGAEKPAAKGKKGKAGKDPNKPKRAPSAFFVFMGEFREEFK 271

Query:   114 GEHP-GLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAA-- 170
              ++P   S+  V K  GE W + +  +K P+  KA KLK +Y K IA+Y  KG+   A  
Sbjct:   272 QKNPKNKSVAAVGKAAGERWKSLSESEKAPFVAKANKLKGEYNKAIASYN-KGESTTAAP 448

Query:   171 KKGVVKA------EKSKKKKEEEEDEEDEEDEEEEEDE-E 203
             KK   K       E+S K K E  D++D+E  +E ED  E
Sbjct:   449 KKASSKEVEEEDEEESDKSKSEINDDDDDEGSDEAEDAAE 568

 Score = 122 (42.9 bits), Expect = 0.00022, P = 0.00022
 Identities = 30/84 (35%), Positives = 45/84 (53%), Frame = +2

Query:     1 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 60
             GK DP KP+   S++  F+   REE K+K+P  + + +   K   ERWK++S  EK  F 
Sbjct:   194 GK-DPNKPKRAPSAFFVFMGEFREEFKQKNPK-NKSVAAVGKAAGERWKSLSESEKAPFV 367

Query:    61 DMAKADKARYEREMKTYIPPKGET 84
               A   K  Y + + +Y   KGE+
Sbjct:   368 AKANKLKGEYNKAIASY--NKGES 433


>AB000637 Canavalia gladiata mRNA for HMG-1, complete cds.
          Length = 736

  Plus Strand HSPs:

 Score = 263 (92.6 bits), Expect = 1.5e-21, P = 1.5e-21
 Identities = 62/148 (41%), Positives = 85/148 (57%), Frame = +2

Query:    64 KADKARYEREMKTYIPPKG--ETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHP-GLS 120
             KAD    +  +K      G  ++KK  KDPN PKRPPSAFF+F SE+R + K EHP   S
Sbjct:    32 KADAKAADNRLKRKGAGAGRKQSKKAAKDPNKPKRPPSAFFVFMSEFREQYKKEHPTNKS 211

Query:   121 IGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKS 180
             +  V K  G+ W + +  +K P+  +A K KE+Y+K I AY  K       K   + EKS
Sbjct:   212 VAVVGKAGGDKWKSLSDAEKAPFVARAEKKKEEYDKSILAYNRK----LEGKNPSEEEKS 379

Query:   181 KKKKEEEEDEEDEEDEEEEEDEEDEDEEEDD 211
              K K E  DE+  EDEEE++D+E     +D+
Sbjct:   380 DKSKSEVNDED--EDEEEDQDDE*SSWTQDE 466

 Score = 249 (87.7 bits), Expect = 4.5e-20, P = 4.5e-20
 Identities = 62/151 (41%), Positives = 85/151 (56%), Frame = +2

Query:    64 KADKARYEREMKTYIPPKG--ETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHP-GLS 120
             KAD    +  +K      G  ++KK  KDPN PKRPPSAFF+F SE+R + K EHP   S
Sbjct:    32 KADAKAADNRLKRKGAGAGRKQSKKAAKDPNKPKRPPSAFFVFMSEFREQYKKEHPTNKS 211

Query:   121 IGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKS 180
             +  V K  G+ W + +  +K P+  +A K KE+Y+K I AY  K       +G       
Sbjct:   212 VAVVGKAGGDKWKSLSDAEKAPFVARAEKKKEEYDKSILAYNRK------LEG------- 352

Query:   181 KKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
               K   EE++ D+   + E ++EDEDEEED DDE
Sbjct:   353 --KNPSEEEKSDKS--KSEVNDEDEDEEEDQDDE 442

 Score = 118 (41.5 bits), Expect = 0.00048, P = 0.00048
 Identities = 23/74 (31%), Positives = 41/74 (55%), Frame = +2

Query:     4 DPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMA 63
             DP KP+   S++  F+   RE++KK+HP  + + +   K   ++WK++S  EK  F   A
Sbjct:   116 DPNKPKRPPSAFFVFMSEFREQYKKEHP-TNKSVAVVGKAGGDKWKSLSDAEKAPFVARA 292

Query:    64 KADKARYEREMKTY 77
             +  K  Y++ +  Y
Sbjct:   293 EKKKEEYDKSILAY 334


>L12169 Japanese morning glory high mobility group protein mRNA sequence.
        Length = 726

  Plus Strand HSPs:

 Score = 261 (91.9 bits), Expect = 2.5e-21, P = 2.5e-21
 Identities = 53/124 (42%), Positives = 76/124 (61%), Frame = +3

Query:    83 ETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPG-LSIGDVAKKLGEMWNNTAADDKQ 141
             +TKK  KDPN PKRPPSAFF+F  ++R   K +HP   S+  V K  G+ W    A +K 
Sbjct:   153 KTKKAVKDPNKPKRPPSAFFVFMEDFRKTYKEKHPNNKSVAVVGKAGGDKWKQLTAAEKA 332

Query:   142 PYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEED 201
             P+  KA K K++YEK++ AY  K    AA  G  + E+S K + E  D+++++D   E+D
Sbjct:   333 PFISKAEKRKQEYEKNLQAYNKK---QAA--GAAEEEESDKSRSEVNDDDEDQDGSGEDD 497

Query:   202 EEDED 206
              ED+D
Sbjct:   498 SEDDD 512

 Score = 251 (88.4 bits), Expect = 2.8e-20, P = 2.8e-20
 Identities = 57/130 (43%), Positives = 76/130 (58%), Frame = +3

Query:    83 ETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPG-LSIGDVAKKLGEMWNNTAADDKQ 141
             +TKK  KDPN PKRPPSAFF+F  ++R   K +HP   S+  V K  G+ W    A +K 
Sbjct:   153 KTKKAVKDPNKPKRPPSAFFVFMEDFRKTYKEKHPNNKSVAVVGKAGGDKWKQLTAAEKA 332

Query:   142 PYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEED 201
             P+  KA K K++YEK++ AY  K    AA  G  + E+S K + E  D  D+ED+    D
Sbjct:   333 PFISKAEKRKQEYEKNLQAYNKK---QAA--GAAEEEESDKSRSEVND--DDEDQ----D 479

Query:   202 EEDEDEEEDDD 212
                ED+ EDDD
Sbjct:   480 GSGEDDSEDDD 512

 Score = 122 (42.9 bits), Expect = 0.00014, P = 0.00014
 Identities = 23/74 (31%), Positives = 43/74 (58%), Frame = +3

Query:     4 DPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMA 63
             DP KP+   S++  F++  R+ +K+KHP+ + + +   K   ++WK ++A EK  F   A
Sbjct:   174 DPNKPKRPPSAFFVFMEDFRKTYKEKHPN-NKSVAVVGKAGGDKWKQLTAAEKAPFISKA 350

Query:    64 KADKARYEREMKTY 77
             +  K  YE+ ++ Y
Sbjct:   351 EKRKQEYEKNLQAY 392


>Z21703 V.faba mRNA for HMG box.
        Length = 823

  Plus Strand HSPs:

 Score = 260 (91.5 bits), Expect = 2.8e-21, P = 2.8e-21
 Identities = 57/121 (47%), Positives = 82/121 (67%), Frame = +1

Query:    79 PPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPG-LSIGDVAKKLGEMWNNTAA 137
             P KG   K+ KDPN PKRPPSAFF+F +++R + K +HP   S+  V K  GE W + + 
Sbjct:   205 PAKG---KEPKDPNKPKRPPSAFFVFMADFREQYKKDHPNNKSVAAVGKACGEEWKSLSE 375

Query:   138 DDKQPYEKKAAKLKEKYEKDIAAYRAK--GKPDAAKKGVVKAEKSKKK-KEEEEDEEDEE 194
             ++K PY  +A K KE+YE  + AY  K  GK D  ++G   ++KSK +  +E+EDEEDEE
Sbjct:   376 EEKAPYVDRALKKKEEYEITLQAYNKKLEGKDD--EEG---SDKSKSEVNDEDEDEEDEE 540

Query:   195 DEEEE 199
             DE+++
Sbjct:   541 DEDDD 555

 Score = 245 (86.2 bits), Expect = 1.1e-19, P = 1.1e-19
 Identities = 59/157 (37%), Positives = 88/157 (56%), Frame = +1

Query:    57 GKFEDMAKADKARYEREMKTYIPPKGETK----KKFKDPNAPKRPPSAFFLFCSEYRPKI 112
             GK +  +K  + +     K     KG  K    K+ KDPN PKRPPSAFF+F +++R + 
Sbjct:   118 GKSKGESKKAETKLAVNKKGAAATKGGKKPAKGKEPKDPNKPKRPPSAFFVFMADFREQY 297

Query:   113 KGEHPG-LSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAK 171
             K +HP   S+  V K  GE W + + ++K PY  +A K KE+YE  + AY  K       
Sbjct:   298 KKDHPNNKSVAAVGKACGEEWKSLSEEEKAPYVDRALKKKEEYEITLQAYNKK------L 459

Query:   172 KGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDD 213
             +G          K++EE  +  + E  +EDE++EDEE++DDD
Sbjct:   460 EG----------KDDEEGSDKSKSEVNDEDEDEEDEEDEDDD 555

 Score = 136 (47.9 bits), Expect = 3.0e-06, P = 3.0e-06
 Identities = 26/74 (35%), Positives = 42/74 (56%), Frame = +1

Query:     4 DPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMA 63
             DP KP+   S++  F+   RE++KK HP+ + + +   K C E WK++S +EK  + D A
Sbjct:   229 DPNKPKRPPSAFFVFMADFREQYKKDHPN-NKSVAAVGKACGEEWKSLSEEEKAPYVDRA 405

Query:    64 KADKARYEREMKTY 77
                K  YE  ++ Y
Sbjct:   406 LKKKEEYEITLQAY 447

 Score = 95 (33.4 bits), Expect = 0.31, P = 0.27
 Identities = 22/65 (33%), Positives = 37/65 (56%), Frame = +1

Query:   151 KEKYEKDIAAY--RAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEE 208
             K   E++ A Y  RA  K +  +  +    K  + K++EE  +  + E  +EDE++EDEE
Sbjct:   361 KSLSEEEKAPYVDRALKKKEEYEITLQAYNKKLEGKDDEEGSDKSKSEVNDEDEDEEDEE 540

Query:   209 EDDDD 213
             ++DDD
Sbjct:   541 DEDDD 555


>AF002226 Nicotiana tabacum DNA-binding protein (T231) mRNA, complete cds.
          Length = 759

  Plus Strand HSPs:

 Score = 260 (91.5 bits), Expect = 3.0e-21, P = 3.0e-21
 Identities = 57/141 (40%), Positives = 85/141 (60%), Frame = +2

Query:    64 KADKARYEREMKTYIPPKG-ETKKK---FKDPNAPKRPPSAFFLFCSEYRPKIKGEHPG- 118
             K  K++   + K  +  K  ETKK     KDPN PKRPPSAFF+F  E+R   K +HP  
Sbjct:    29 KGGKSKAGADSKLGVRKKATETKKAKKAAKDPNKPKRPPSAFFVFMEEFRKTYKEKHPNN 208

Query:   119 LSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAE 178
              S+  V K  G+ W   +  +K PY+ KA K K +Y+K++ AY  K   DA +    +++
Sbjct:   209 KSVAAVGKAGGDAWKKLSEAEKAPYQAKAEKRKAEYQKNMDAYNRKQAGDAEED---ESD 379

Query:   179 KSKKKKEEEEDEEDEEDEEEEEDE 202
             KSK +  +++DE+D+  EEEE+D+
Sbjct:   380 KSKSEVHDDDDEDDDGSEEEEDDD 451

 Score = 247 (86.9 bits), Expect = 7.2e-20, P = 7.2e-20
 Identities = 61/150 (40%), Positives = 84/150 (56%), Frame = +2

Query:    64 KADKARYEREMKTYIPPKG-ETKKK---FKDPNAPKRPPSAFFLFCSEYRPKIKGEHPG- 118
             K  K++   + K  +  K  ETKK     KDPN PKRPPSAFF+F  E+R   K +HP  
Sbjct:    29 KGGKSKAGADSKLGVRKKATETKKAKKAAKDPNKPKRPPSAFFVFMEEFRKTYKEKHPNN 208

Query:   119 LSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAE 178
              S+  V K  G+ W   +  +K PY+ KA K K +Y+K++ AY  K   DA +      +
Sbjct:   209 KSVAAVGKAGGDAWKKLSEAEKAPYQAKAEKRKAEYQKNMDAYNRKQAGDAEE------D 370

Query:   179 KSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDD 213
             +S K K E  D++DE+D        D  EEE+DDD
Sbjct:   371 ESDKSKSEVHDDDDEDD--------DGSEEEEDDD 451

 Score = 121 (42.6 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
 Identities = 23/74 (31%), Positives = 42/74 (56%), Frame = +2

Query:     4 DPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMA 63
             DP KP+   S++  F++  R+ +K+KHP+ + + +   K   + WK +S  EK  ++  A
Sbjct:   119 DPNKPKRPPSAFFVFMEEFRKTYKEKHPN-NKSVAAVGKAGGDAWKKLSEAEKAPYQAKA 295

Query:    64 KADKARYEREMKTY 77
             +  KA Y++ M  Y
Sbjct:   296 EKRKAEYQKNMDAY 337

 Score = 98 (34.5 bits), Expect = 0.13, P = 0.12
 Identities = 26/67 (38%), Positives = 39/67 (58%), Frame = +2

Query:   151 KEKYEKDIAAYRAKG-KPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE-EEEDEEDED-- 206
             K+  E + A Y+AK  K  A  +  + A   K+  + EEDE D+   E  ++D+ED+D  
Sbjct:   251 KKLSEAEKAPYQAKAEKRKAEYQKNMDAYNRKQAGDAEEDESDKSKSEVHDDDDEDDDGS 430

Query:   207 EEEDDDD 213
             EEE+DDD
Sbjct:   431 EEEEDDD 451

 Score = 43 (15.1 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
 Identities = 10/24 (41%), Positives = 15/24 (62%), Frame = +1

Query:   165 GKPDAAKKGVVKAEKSKKKKEEEE 188
             G P   KK   K +K KKKK++++
Sbjct:   688 GFPFKKKKKKKKKKKKKKKKKKKK 759


>X80465 M.musculus HMG1-R-168 gene
        Length = 181

  Plus Strand HSPs:

 Score = 219 (77.1 bits), Expect = 1.8e-20, Sum P(2) = 1.8e-20
 Identities = 41/49 (83%), Positives = 44/49 (89%), Frame = +2

Query:    11 KMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKF 59
             K   YAFF+QTC+EEHK K+ DASVNFSEFSKKCSERWKTMSAKEKGKF
Sbjct:    35 KCPVYAFFMQTCQEEHKTKYLDASVNFSEFSKKCSERWKTMSAKEKGKF 181

 Score = 55 (19.4 bits), Expect = 0.027, Sum P(2) = 0.027
 Identities = 13/46 (28%), Positives = 21/46 (45%), Frame = +2

Query:    95 KRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDK 140
             K P  AFF+   +   K K     ++  + +KK  E W   +A +K
Sbjct:    35 KCPVYAFFMQTCQEEHKTKYLDASVNFSEFSKKCSERWKTMSAKEK 172

 Score = 54 (19.0 bits), Expect = 1.8e-20, Sum P(2) = 1.8e-20
 Identities = 11/13 (84%), Positives = 11/13 (84%), Frame = +1

Query:     1 GKGDPKKPRGKMS 13
             GKGDPKK R KMS
Sbjct:     4 GKGDPKKLRRKMS 42


>Y09482 A.thaliana mRNA for HMG 1 protein
        Length = 738

  Plus Strand HSPs:

 Score = 252 (88.7 bits), Expect = 2.2e-20, P = 2.2e-20
 Identities = 62/149 (41%), Positives = 85/149 (57%), Frame = +1

Query:    60 EDMAKADKARYE-REMKTYI---PPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGE 115
             E + K  K++ E R  K  +   P KG  K   KDPN PKRP SAFF+F  ++R   K E
Sbjct:    40 ESIMKGAKSKAETRSTKLSVTKKPAKG-AKGAAKDPNKPKRPSSAFFVFMEDFRVTYKEE 216

Query:   116 HP-GLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGV 174
             HP   S+  V K  GE W + +  +K PY  KA K K +YEK++ AY  K      ++G 
Sbjct:   217 HPKNKSVAAVGKAGGEKWKSLSDSEKAPYVAKADKRKVEYEKNMKAYNKK-----LEEGP 381

Query:   175 VKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEE 208
              + E+S K   E  DE+D ED  EEE+++D + E
Sbjct:   382 KEDEESDKSVSEVNDEDDAEDGSEEEEDDD*EVE 483

 Score = 164 (57.7 bits), Expect = 4.6e-11, P = 4.6e-11
 Identities = 59/154 (38%), Positives = 76/154 (49%), Frame = +1

Query:    60 EDMAKADKARYE-REMKTYIP--PKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEH 116
             E + K  K++ E R  K  +   P    K   KDPN PKRP SAFF+F  ++R   K EH
Sbjct:    40 ESIMKGAKSKAETRSTKLSVTKKPAKGAKGAAKDPNKPKRPSSAFFVFMEDFRVTYKEEH 219

Query:   117 PGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVK 176
             P        K       + AA  K   EK     K   + + A Y AK   D  K    K
Sbjct:   220 P--------KN-----KSVAAVGKAGGEK----WKSLSDSEKAPYVAKA--DKRKVEYEK 342

Query:   177 AEKSKKKKEEEEDEEDEEDEE------EEEDEEDEDEEEDDDD 213
               K+  KK EE  +EDEE ++      +E+D ED  EEE+DDD
Sbjct:   343 NMKAYNKKLEEGPKEDEESDKSVSEVNDEDDAEDGSEEEEDDD 471

 Score = 124 (43.7 bits), Expect = 8.3e-05, P = 8.3e-05
 Identities = 27/74 (36%), Positives = 45/74 (60%), Frame = +1

Query:     4 DPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMA 63
             DP KP+   S++  F++  R  +K++HP  + + +   K   E+WK++S  EK  +  +A
Sbjct:   139 DPNKPKRPSSAFFVFMEDFRVTYKEEHPK-NKSVAAVGKAGGEKWKSLSDSEKAPY--VA 309

Query:    64 KADKAR--YEREMKTY 77
             KADK +  YE+ MK Y
Sbjct:   310 KADKRKVEYEKNMKAY 357

 Score = 95 (33.4 bits), Expect = 0.28, P = 0.24
 Identities = 28/69 (40%), Positives = 37/69 (53%), Frame = +1

Query:   149 KLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE------EEEDE 202
             K K   + + A Y AK   D  K    K  K+  KK EE  +EDEE ++      +E+D 
Sbjct:   265 KWKSLSDSEKAPYVAKA--DKRKVEYEKNMKAYNKKLEEGPKEDEESDKSVSEVNDEDDA 438

Query:   203 EDEDEEEDDDD 213
             ED  EEE+DDD
Sbjct:   439 EDGSEEEEDDD 471


>Y14073 Arabidopsis thaliana mRNA for HMG beta2 protein
        Length = 731

  Plus Strand HSPs:

 Score = 252 (88.7 bits), Expect = 2.2e-20, P = 2.2e-20
 Identities = 62/149 (41%), Positives = 85/149 (57%), Frame = +3

Query:    60 EDMAKADKARYE-REMKTYI---PPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGE 115
             E + K  K++ E R  K  +   P KG  K   KDPN PKRP SAFF+F  ++R   K E
Sbjct:    42 ESIMKGAKSKAETRSTKLSVTKKPAKG-AKGAAKDPNKPKRPSSAFFVFMEDFRVTYKEE 218

Query:   116 HP-GLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGV 174
             HP   S+  V K  GE W + +  +K PY  KA K K +YEK++ AY  K      ++G 
Sbjct:   219 HPKNKSVAAVGKAGGEKWKSLSDSEKAPYVAKADKRKVEYEKNMKAYNKK-----LEEGP 383

Query:   175 VKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEE 208
              + E+S K   E  DE+D ED  EEE+++D + E
Sbjct:   384 KEDEESDKSVSEVNDEDDAEDGSEEEEDDD*EVE 485

 Score = 164 (57.7 bits), Expect = 4.6e-11, P = 4.6e-11
 Identities = 59/154 (38%), Positives = 76/154 (49%), Frame = +3

Query:    60 EDMAKADKARYE-REMKTYIP--PKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEH 116
             E + K  K++ E R  K  +   P    K   KDPN PKRP SAFF+F  ++R   K EH
Sbjct:    42 ESIMKGAKSKAETRSTKLSVTKKPAKGAKGAAKDPNKPKRPSSAFFVFMEDFRVTYKEEH 221

Query:   117 PGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVK 176
             P        K       + AA  K   EK     K   + + A Y AK   D  K    K
Sbjct:   222 P--------KN-----KSVAAVGKAGGEK----WKSLSDSEKAPYVAKA--DKRKVEYEK 344

Query:   177 AEKSKKKKEEEEDEEDEEDEE------EEEDEEDEDEEEDDDD 213
               K+  KK EE  +EDEE ++      +E+D ED  EEE+DDD
Sbjct:   345 NMKAYNKKLEEGPKEDEESDKSVSEVNDEDDAEDGSEEEEDDD 473

 Score = 124 (43.7 bits), Expect = 8.0e-05, P = 8.0e-05
 Identities = 27/74 (36%), Positives = 45/74 (60%), Frame = +3

Query:     4 DPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMA 63
             DP KP+   S++  F++  R  +K++HP  + + +   K   E+WK++S  EK  +  +A
Sbjct:   141 DPNKPKRPSSAFFVFMEDFRVTYKEEHPK-NKSVAAVGKAGGEKWKSLSDSEKAPY--VA 311

Query:    64 KADKAR--YEREMKTY 77
             KADK +  YE+ MK Y
Sbjct:   312 KADKRKVEYEKNMKAY 359

 Score = 95 (33.4 bits), Expect = 0.28, P = 0.24
 Identities = 28/69 (40%), Positives = 37/69 (53%), Frame = +3

Query:   149 KLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE------EEEDE 202
             K K   + + A Y AK   D  K    K  K+  KK EE  +EDEE ++      +E+D 
Sbjct:   267 KWKSLSDSEKAPYVAKA--DKRKVEYEKNMKAYNKKLEEGPKEDEESDKSVSEVNDEDDA 440

Query:   203 EDEDEEEDDDD 213
             ED  EEE+DDD
Sbjct:   441 EDGSEEEEDDD 473


>Y14072 Arabidopsis thaliana mRNA for HMG beta1 protein
        Length = 686

  Plus Strand HSPs:

 Score = 251 (88.4 bits), Expect = 3.0e-20, P = 3.0e-20
 Identities = 61/151 (40%), Positives = 86/151 (56%), Frame = +1

Query:    60 EDMAKADKARYE-REMKTYI---PPKGETKKKF--KDPNAPKRPPSAFFLFCSEYRPKIK 113
             E + K  K++ E R  K  +   P KG  + K   KDPN PKRP SAFF+F  ++R   K
Sbjct:    25 ESIMKGAKSKTETRSSKLSVTKKPAKGAGRGKAAAKDPNKPKRPASAFFVFMEDFRETFK 204

Query:   114 GEHP-GLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKK 172
              E+P   S+  V K  G+ W + +  +K PY  KA K K +YEK+I AY  K      ++
Sbjct:   205 KENPKNKSVATVGKAAGDKWKSLSDSEKAPYVAKAEKRKVEYEKNIKAYNKK-----LEE 369

Query:   173 GVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEE 208
             G  + E+S K   E  DE+D ED  EEE+++D + E
Sbjct:   370 GPKEDEESDKSVSEVNDEDDAEDGSEEEEDDD*EAE 477

 Score = 162 (57.0 bits), Expect = 8.1e-11, P = 8.1e-11
 Identities = 65/154 (42%), Positives = 86/154 (55%), Frame = +1

Query:    60 EDMAKADKARYE-REMKTYI---PPKGETKKKF--KDPNAPKRPPSAFFLFCSEYRPKIK 113
             E + K  K++ E R  K  +   P KG  + K   KDPN PKRP SAFF+F  ++R   K
Sbjct:    25 ESIMKGAKSKTETRSSKLSVTKKPAKGAGRGKAAAKDPNKPKRPASAFFVFMEDFRETFK 204

Query:   114 GEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKG 173
              E+P      VA  +G+     AA DK     K+    EK     A Y AK     A+K 
Sbjct:   205 KENPKNK--SVAT-VGK-----AAGDKW----KSLSDSEK-----APYVAK-----AEKR 318

Query:   174 VVKAEKSKK---KKEEEEDEEDEEDEE------EEEDEEDEDEEEDDDD 213
              V+ EK+ K   KK EE  +EDEE ++      +E+D ED  EEE+DDD
Sbjct:   319 KVEYEKNIKAYNKKLEEGPKEDEESDKSVSEVNDEDDAEDGSEEEEDDD 465

 Score = 119 (41.9 bits), Expect = 0.00030, P = 0.00030
 Identities = 23/74 (31%), Positives = 41/74 (55%), Frame = +1

Query:     4 DPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMA 63
             DP KP+   S++  F++  RE  KK++P  + + +   K   ++WK++S  EK  +   A
Sbjct:   133 DPNKPKRPASAFFVFMEDFRETFKKENPK-NKSVATVGKAAGDKWKSLSDSEKAPYVAKA 309

Query:    64 KADKARYEREMKTY 77
             +  K  YE+ +K Y
Sbjct:   310 EKRKVEYEKNIKAY 351

 Score = 93 (32.7 bits), Expect = 0.44, P = 0.35
 Identities = 33/74 (44%), Positives = 44/74 (59%), Frame = +1

Query:   146 KAA--KLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKK---KKEEEEDEEDEEDEE--- 197
             KAA  K K   + + A Y AK     A+K  V+ EK+ K   KK EE  +EDEE ++   
Sbjct:   244 KAAGDKWKSLSDSEKAPYVAK-----AEKRKVEYEKNIKAYNKKLEEGPKEDEESDKSVS 408

Query:   198 ---EEEDEEDEDEEEDDDD 213
                +E+D ED  EEE+DDD
Sbjct:   409 EVNDEDDAEDGSEEEEDDD 465


>L42571 Cricetulus griseus ribosomal transcription factor (UBF2) mRNA,
        Length = 2305

  Plus Strand HSPs:

 Score = 162 (57.0 bits), Expect = 6.4e-20, Sum P(2) = 6.4e-20
 Identities = 53/183 (28%), Positives = 94/183 (51%), Frame = +1

Query:     1 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 60
             GKG  +KP+  +S+   F +  R + +++ P+ S   SE ++  +  W  +S K+K K++
Sbjct:  1093 GKGGSEKPKRPVSAMFIFSEEKRRQLQEQRPELSE--SELTRLLARMWNDLSEKKKAKYK 1266

Query:    61 DMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFL-FCSEYRPKIKGEHPGL 119
                 A KA+ ER       P GE +++ K P +PKR    +      +Y  + K +    
Sbjct:  1267 AREAALKAQSERM------PGGEREERGKLPESPKRAEEIWQQSVIGDYLARFKNDRVK- 1425

Query:   120 SIGDVAKKLGEM-WNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAK-GKPDAAKKGVVKA 177
                  A K  EM WNN    +K  + KKAA+ +++YE++++  RA     +++KK  +K 
Sbjct:  1426 -----ALKAMEMTWNNMEKKEKLMWIKKAAEDQKRYERELSEMRAPPAATNSSKK--MKF 1584

Query:   178 EKSKKK 183
             +   KK
Sbjct:  1585 QGMPKK 1602

 Score = 135 (47.5 bits), Expect = 4.0e-14, Sum P(2) = 4.0e-14
 Identities = 41/145 (28%), Positives = 68/145 (46%), Frame = +1

Query:    40 FSKKCSERWKTMSAKEKGKFEDMAKADKARYEREMKTY-IPPKGETKKKFKDPNA----- 93
             + KKC ++ K    +     E + + ++ R   E K   I  K  T    K P+      
Sbjct:   922 YHKKCDQKKKDYEVELLRFLESLPEEEQQRVLGEEKMLNINKKQTTSPASKKPSQEGGKG 1101

Query:    94 ----PKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAK 149
                 PKRP SA F+F  E R +++ + P LS  ++ + L  MWN+ +   K  Y+ + A 
Sbjct:  1102 GSEKPKRPVSAMFIFSEEKRRQLQEQRPELSESELTRLLARMWNDLSEKKKAKYKAREAA 1281

Query:   150 LKEKYEKDIAAYRA-KGK-PDAAKK 172
             LK + E+     R  +GK P++ K+
Sbjct:  1282 LKAQSERMPGGEREERGKLPESPKR 1356

 Score = 127 (44.7 bits), Expect = 4.9e-13, Sum P(2) = 4.9e-13
 Identities = 46/158 (29%), Positives = 73/158 (46%), Frame = +1

Query:    28 KKHPD-ASVNFSEF-SKKCSERWKTMSAKEKGKFEDMAKADKARYEREMKTYIPPKGETK 85
             + H D   V F +F    C  +W  +S  E  KF  + +      E     Y   KG  K
Sbjct:   154 ESHMDWEKVAFKDFLGDMCKLKWVEIS-NEVRKFRTLTELILDAQEHVKNPY---KG--K 315

Query:    86 KKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEK 145
             K  K P+ PK+P + +  F  E R K    HP +S  D+ K L + +       K  Y +
Sbjct:   316 KLKKHPDFPKKPLTPYLRFFMEKRAKYAKLHPEMSNLDLTKILSKKYKELPEKKKMKYIQ 495

Query:   146 KAAKLKEKYEKDIAAYRAKGKPDA---AKKGVVKAEKSKKKKE 185
                + K+++E+++A +R +  PD    AKK  +  EK K  ++
Sbjct:   496 DFQREKQEFERNLARFR-EDHPDLIQNAKKSDIP-EKPKTPQQ 618

 Score = 118 (41.5 bits), Expect = 6.4e-20, Sum P(2) = 6.4e-20
 Identities = 23/37 (62%), Positives = 29/37 (78%), Frame = +1

Query:   179 KSKKKKEEEEDEEDEEDEEEEEDEEDE--DEEEDDDD 213
             +SK + EEEEDEEDE+D+EEEE+E+DE  D  ED  D
Sbjct:  1909 QSKSESEEEEDEEDEDDDEEEEEEDDENGDSSEDGGD 2019

 Score = 111 (39.1 bits), Expect = 0.0071, P = 0.0071
 Identities = 51/188 (27%), Positives = 89/188 (47%), Frame = +1

Query:    35 VNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARYEREMKTYIPPKGETKK-KFKD-PN 92
             + ++   KK    W   +A+++ ++E        R   EM+        +KK KF+  P 
Sbjct:  1444 MTWNNMEKKEKLMWIKKAAEDQKRYE--------RELSEMRAPPAATNSSKKMKFQGMPK 1599

Query:    93 APKRPPSAFFLFCSEYRPKIKGEHPGLS-----IGD----VAKKLGEMWNNTAADDKQPY 143
              P  P + +  F  E     +  H  L      IG     +++   E +   A + ++ Y
Sbjct:  1600 KP--PMNGYQKFSQELLSNGELNHLPLKERMVEIGSRWQRISQSQKEHYKKLAEEQQKQY 1773

Query:   144 EKKAAK-LKEKYEKDIAAYRA----KGKPDAAKKGV-VKAEKSK-KKKEEEEDEEDEEDE 196
             +      +K    +D AAY+     K K     +G   K+ ++  + K E E+EEDEEDE
Sbjct:  1774 KVHLDLWVKSLSPQDRAAYKEYISNKRKNMTKLRGPNPKSSRTTLQSKSESEEEEDEEDE 1953

Query:   197 EEEEDEEDEDEEEDDDDE 214
             +++E+EE+ED+E  D  E
Sbjct:  1954 DDDEEEEEEDDENGDSSE 2007

 Score = 108 (38.0 bits), Expect = 8.1e-11, Sum P(2) = 8.1e-11
 Identities = 38/151 (25%), Positives = 70/151 (46%), Frame = +1

Query:     5 PKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAK 64
             PKKP   ++ Y  F    R ++ K HP+ S N  + +K  S+++K +  K+K K+    +
Sbjct:   340 PKKP---LTPYLRFFMEKRAKYAKLHPEMS-NL-DLTKILSKKYKELPEKKKMKYIQDFQ 504

Query:    65 ADKARYEREMKTYI---PPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSI 121
              +K  +ER +  +    P   +  KK   P  PK P   ++    +   K++   P   +
Sbjct:   505 REKQEFERNLARFREDHPDLIQNAKKSDIPEKPKTPQQLWYTHEKKVYLKVR---PDEIM 675

Query:   122 GDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYE 155
              D  +K  E+  +     K    K   +LK+K++
Sbjct:   676 RDYIQKHPELNISEEGITKSTLTKAERQLKDKFD 777

 Score = 104 (36.6 bits), Expect = 1.9e-18, Sum P(2) = 1.9e-18
 Identities = 17/47 (36%), Positives = 36/47 (76%), Frame = +1

Query:   168 DAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             D+++ G   +E S +  E E+ +E+E+D+++++D+ED+DE+ED++ E
Sbjct:  1996 DSSEDGGDSSESSSED-ESEDGDENEDDDDDDDDDEDDDEDEDNESE 2133

 Score = 102 (35.9 bits), Expect = 0.077, P = 0.074
 Identities = 22/94 (23%), Positives = 47/94 (50%), Frame = +1

Query:   121 IGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKS 180
             I +  K + ++        +   + K+   +E+ E+D      + + D  + G    +  
Sbjct:  1840 ISNKRKNMTKLRGPNPKSSRTTLQSKSESEEEEDEEDEDDDEEEEEEDD-ENGDSSEDGG 2016

Query:   181 KKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
                +   EDE ++ DE E++D++D+D+E+DD+DE
Sbjct:  2017 DSSESSSEDESEDGDENEDDDDDDDDDEDDDEDE 2118

 Score = 102 (35.9 bits), Expect = 0.077, P = 0.074
 Identities = 42/212 (19%), Positives = 98/212 (46%), Frame = +1

Query:     2 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 61
             +G PKKP   M+ Y  F Q      +  H    +   E   +   RW+ +S  +K  ++ 
Sbjct:  1585 QGMPKKP--PMNGYQKFSQELLSNGELNH----LPLKERMVEIGSRWQRISQSQKEHYKK 1746

Query:    62 MAKADKARYEREMKTYIPPKG-ETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS 120
             +A+  + +Y+  +  ++     + +  +K+  + KR          +   K++G +P  S
Sbjct:  1747 LAEEQQKQYKVHLDLWVKSLSPQDRAAYKEYISNKR----------KNMTKLRGPNPKSS 1896

Query:   121 IGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVV-KAEK 179
                +  K       + +++++  E +    +E+ E D     ++   D+++     ++E 
Sbjct:  1897 RTTLQSK-------SESEEEEDEEDEDDDEEEEEEDDENGDSSEDGGDSSESSSEDESED 2055

Query:   180 SKKKKEEEEDEEDEEDEEEEEDEEDEDEEE------DDDD 213
               + +++++D++D+ED++E+ED E E          D  D
Sbjct:  2056 GDENEDDDDDDDDDEDDDEDEDNESEGSSSSSSSSGDSSD 2175

 Score = 98 (34.5 bits), Expect = 0.22, P = 0.20
 Identities = 42/211 (19%), Positives = 99/211 (46%), Frame = +1

Query:     2 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 61
             +G PKKP   M+ Y  F Q      +  H    +   E   +   RW+ +S  +K  ++ 
Sbjct:  1585 QGMPKKP--PMNGYQKFSQELLSNGELNH----LPLKERMVEIGSRWQRISQSQKEHYKK 1746

Query:    62 MAKADKARYEREMKTYIPPKG-ETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS 120
             +A+  + +Y+  +  ++     + +  +K+  + KR          +   K++G +P  S
Sbjct:  1747 LAEEQQKQYKVHLDLWVKSLSPQDRAAYKEYISNKR----------KNMTKLRGPNPKSS 1896

Query:   121 IGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVV-KAEK 179
                +  K       + +++++  E +    +E+ E D     ++   D+++     ++E 
Sbjct:  1897 RTTLQSK-------SESEEEEDEEDEDDDEEEEEEDDENGDSSEDGGDSSESSSEDESED 2055

Query:   180 SKKKKEEEEDEEDEEDEEEEEDEEDED---------EEEDDD 212
               + +++++D++D+ED++E+ED E E          +  D D
Sbjct:  2056 GDENEDDDDDDDDDEDDDEDEDNESEGSSSSSSSSGDSSDSD 2181

 Score = 87 (30.6 bits), Expect = 4.0, P = 0.98
 Identities = 27/115 (23%), Positives = 53/115 (46%), Frame = +1

Query:    83 ETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQP 142
             + K KF D    K PP+++ L+C+E    +K + P     +      + W   +  +K  
Sbjct:   757 QLKDKF-DGRPTKPPPNSYSLYCAELMANMK-DVPST---ERMVLCSQQWKLLSQKEKDA 921

Query:   143 YEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEK--SKKKKEEEEDEEDEEDEE 197
             Y KK  + K+ YE ++  +  +  P+  ++ V+  EK  +  KK+       +  +E
Sbjct:   922 YHKKCDQKKKDYEVELLRF-LESLPEEEQQRVLGEEKMLNINKKQTTSPASKKPSQE 1089


>L42570 Cricetulus griseus ribosomal transcription factor (UBF1) mRNA,
        Length = 2416

  Plus Strand HSPs:

 Score = 162 (57.0 bits), Expect = 7.0e-20, Sum P(2) = 7.0e-20
 Identities = 53/183 (28%), Positives = 94/183 (51%), Frame = +1

Query:     1 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 60
             GKG  +KP+  +S+   F +  R + +++ P+ S   SE ++  +  W  +S K+K K++
Sbjct:  1204 GKGGSEKPKRPVSAMFIFSEEKRRQLQEQRPELSE--SELTRLLARMWNDLSEKKKAKYK 1377

Query:    61 DMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFL-FCSEYRPKIKGEHPGL 119
                 A KA+ ER       P GE +++ K P +PKR    +      +Y  + K +    
Sbjct:  1378 AREAALKAQSERM------PGGEREERGKLPESPKRAEEIWQQSVIGDYLARFKNDRVK- 1536

Query:   120 SIGDVAKKLGEM-WNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAK-GKPDAAKKGVVKA 177
                  A K  EM WNN    +K  + KKAA+ +++YE++++  RA     +++KK  +K 
Sbjct:  1537 -----ALKAMEMTWNNMEKKEKLMWIKKAAEDQKRYERELSEMRAPPAATNSSKK--MKF 1695

Query:   178 EKSKKK 183
             +   KK
Sbjct:  1696 QGMPKK 1713

 Score = 144 (50.7 bits), Expect = 1.7e-15, Sum P(2) = 1.7e-15
 Identities = 43/181 (23%), Positives = 90/181 (49%), Frame = +1

Query:     5 PKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAK 64
             PKKP   ++ Y  F    R ++ K HP+ S N  + +K  S+++K +  K+K K+    +
Sbjct:   340 PKKP---LTPYLRFFMEKRAKYAKLHPEMS-NL-DLTKILSKKYKELPEKKKMKYIQDFQ 504

Query:    65 ADKARYEREMKTYI---PPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSI 121
              +K  +ER +  +    P   +  KK   P  PK P   ++    +   K++   P  + 
Sbjct:   505 REKQEFERNLARFREDHPDLIQNAKKSDIPEKPKTPQQLWYTHEKKVYLKVR---PDATT 675

Query:   122 GDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKP-DAAKKGVVKAEKS 180
              +V   LG+ W+  +   +  +  KA + +++YE+ +  Y  K    + +++G+ K+  +
Sbjct:   676 KEVKDSLGKQWSQLSDKKRLKWIHKALEQRKEYEEIMRDYIQKHPELNISEEGITKSTLT 855

Query:   181 KKKKE 185
             K +++
Sbjct:   856 KAERQ 870

 Score = 135 (47.5 bits), Expect = 4.3e-14, Sum P(2) = 4.3e-14
 Identities = 41/145 (28%), Positives = 68/145 (46%), Frame = +1

Query:    40 FSKKCSERWKTMSAKEKGKFEDMAKADKARYEREMKTY-IPPKGETKKKFKDPNA----- 93
             + KKC ++ K    +     E + + ++ R   E K   I  K  T    K P+      
Sbjct:  1033 YHKKCDQKKKDYEVELLRFLESLPEEEQQRVLGEEKMLNINKKQTTSPASKKPSQEGGKG 1212

Query:    94 ----PKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAK 149
                 PKRP SA F+F  E R +++ + P LS  ++ + L  MWN+ +   K  Y+ + A 
Sbjct:  1213 GSEKPKRPVSAMFIFSEEKRRQLQEQRPELSESELTRLLARMWNDLSEKKKAKYKAREAA 1392

Query:   150 LKEKYEKDIAAYRA-KGK-PDAAKK 172
             LK + E+     R  +GK P++ K+
Sbjct:  1393 LKAQSERMPGGEREERGKLPESPKR 1467

 Score = 127 (44.7 bits), Expect = 5.2e-13, Sum P(2) = 5.2e-13
 Identities = 46/158 (29%), Positives = 73/158 (46%), Frame = +1

Query:    28 KKHPD-ASVNFSEF-SKKCSERWKTMSAKEKGKFEDMAKADKARYEREMKTYIPPKGETK 85
             + H D   V F +F    C  +W  +S  E  KF  + +      E     Y   KG  K
Sbjct:   154 ESHMDWEKVAFKDFLGDMCKLKWVEIS-NEVRKFRTLTELILDAQEHVKNPY---KG--K 315

Query:    86 KKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEK 145
             K  K P+ PK+P + +  F  E R K    HP +S  D+ K L + +       K  Y +
Sbjct:   316 KLKKHPDFPKKPLTPYLRFFMEKRAKYAKLHPEMSNLDLTKILSKKYKELPEKKKMKYIQ 495

Query:   146 KAAKLKEKYEKDIAAYRAKGKPDA---AKKGVVKAEKSKKKKE 185
                + K+++E+++A +R +  PD    AKK  +  EK K  ++
Sbjct:   496 DFQREKQEFERNLARFR-EDHPDLIQNAKKSDIP-EKPKTPQQ 618

 Score = 118 (41.5 bits), Expect = 7.0e-20, Sum P(2) = 7.0e-20
 Identities = 23/37 (62%), Positives = 29/37 (78%), Frame = +1

Query:   179 KSKKKKEEEEDEEDEEDEEEEEDEEDE--DEEEDDDD 213
             +SK + EEEEDEEDE+D+EEEE+E+DE  D  ED  D
Sbjct:  2020 QSKSESEEEEDEEDEDDDEEEEEEDDENGDSSEDGGD 2130

 Score = 111 (39.1 bits), Expect = 0.0072, P = 0.0071
 Identities = 51/188 (27%), Positives = 89/188 (47%), Frame = +1

Query:    35 VNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARYEREMKTYIPPKGETKK-KFKD-PN 92
             + ++   KK    W   +A+++ ++E        R   EM+        +KK KF+  P 
Sbjct:  1555 MTWNNMEKKEKLMWIKKAAEDQKRYE--------RELSEMRAPPAATNSSKKMKFQGMPK 1710

Query:    93 APKRPPSAFFLFCSEYRPKIKGEHPGLS-----IGD----VAKKLGEMWNNTAADDKQPY 143
              P  P + +  F  E     +  H  L      IG     +++   E +   A + ++ Y
Sbjct:  1711 KP--PMNGYQKFSQELLSNGELNHLPLKERMVEIGSRWQRISQSQKEHYKKLAEEQQKQY 1884

Query:   144 EKKAAK-LKEKYEKDIAAYRA----KGKPDAAKKGV-VKAEKSK-KKKEEEEDEEDEEDE 196
             +      +K    +D AAY+     K K     +G   K+ ++  + K E E+EEDEEDE
Sbjct:  1885 KVHLDLWVKSLSPQDRAAYKEYISNKRKNMTKLRGPNPKSSRTTLQSKSESEEEEDEEDE 2064

Query:   197 EEEEDEEDEDEEEDDDDE 214
             +++E+EE+ED+E  D  E
Sbjct:  2065 DDDEEEEEEDDENGDSSE 2118

 Score = 104 (36.6 bits), Expect = 2.0e-18, Sum P(2) = 2.0e-18
 Identities = 17/47 (36%), Positives = 36/47 (76%), Frame = +1

Query:   168 DAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             D+++ G   +E S +  E E+ +E+E+D+++++D+ED+DE+ED++ E
Sbjct:  2107 DSSEDGGDSSESSSED-ESEDGDENEDDDDDDDDDEDDDEDEDNESE 2244

 Score = 102 (35.9 bits), Expect = 0.078, P = 0.075
 Identities = 22/94 (23%), Positives = 47/94 (50%), Frame = +1

Query:   121 IGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKS 180
             I +  K + ++        +   + K+   +E+ E+D      + + D  + G    +  
Sbjct:  1951 ISNKRKNMTKLRGPNPKSSRTTLQSKSESEEEEDEEDEDDDEEEEEEDD-ENGDSSEDGG 2127

Query:   181 KKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
                +   EDE ++ DE E++D++D+D+E+DD+DE
Sbjct:  2128 DSSESSSEDESEDGDENEDDDDDDDDDEDDDEDE 2229

 Score = 102 (35.9 bits), Expect = 0.078, P = 0.075
 Identities = 42/212 (19%), Positives = 98/212 (46%), Frame = +1

Query:     2 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 61
             +G PKKP   M+ Y  F Q      +  H    +   E   +   RW+ +S  +K  ++ 
Sbjct:  1696 QGMPKKP--PMNGYQKFSQELLSNGELNH----LPLKERMVEIGSRWQRISQSQKEHYKK 1857

Query:    62 MAKADKARYEREMKTYIPPKG-ETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS 120
             +A+  + +Y+  +  ++     + +  +K+  + KR          +   K++G +P  S
Sbjct:  1858 LAEEQQKQYKVHLDLWVKSLSPQDRAAYKEYISNKR----------KNMTKLRGPNPKSS 2007

Query:   121 IGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVV-KAEK 179
                +  K       + +++++  E +    +E+ E D     ++   D+++     ++E 
Sbjct:  2008 RTTLQSK-------SESEEEEDEEDEDDDEEEEEEDDENGDSSEDGGDSSESSSEDESED 2166

Query:   180 SKKKKEEEEDEEDEEDEEEEEDEEDEDEEE------DDDD 213
               + +++++D++D+ED++E+ED E E          D  D
Sbjct:  2167 GDENEDDDDDDDDDEDDDEDEDNESEGSSSSSSSSGDSSD 2286

 Score = 98 (34.5 bits), Expect = 0.23, P = 0.20
 Identities = 42/211 (19%), Positives = 99/211 (46%), Frame = +1

Query:     2 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 61
             +G PKKP   M+ Y  F Q      +  H    +   E   +   RW+ +S  +K  ++ 
Sbjct:  1696 QGMPKKP--PMNGYQKFSQELLSNGELNH----LPLKERMVEIGSRWQRISQSQKEHYKK 1857

Query:    62 MAKADKARYEREMKTYIPPKG-ETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS 120
             +A+  + +Y+  +  ++     + +  +K+  + KR          +   K++G +P  S
Sbjct:  1858 LAEEQQKQYKVHLDLWVKSLSPQDRAAYKEYISNKR----------KNMTKLRGPNPKSS 2007

Query:   121 IGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVV-KAEK 179
                +  K       + +++++  E +    +E+ E D     ++   D+++     ++E 
Sbjct:  2008 RTTLQSK-------SESEEEEDEEDEDDDEEEEEEDDENGDSSEDGGDSSESSSEDESED 2166

Query:   180 SKKKKEEEEDEEDEEDEEEEEDEEDED---------EEEDDD 212
               + +++++D++D+ED++E+ED E E          +  D D
Sbjct:  2167 GDENEDDDDDDDDDEDDDEDEDNESEGSSSSSSSSGDSSDSD 2292

 Score = 94 (33.1 bits), Expect = 2.4e-09, Sum P(2) = 2.4e-09
 Identities = 45/207 (21%), Positives = 93/207 (44%), Frame = +1

Query:     2 KGD-PKKPRGKMSSYAFFVQTCREEHKKKHPDASVN---------FSEFSKKCSERWKTM 51
             K D P+KP  K     ++    ++ + K  PDA+           +S+ S K   +W   
Sbjct:   580 KSDIPEKP--KTPQQLWYTHE-KKVYLKVRPDATTKEVKDSLGKQWSQLSDKKRLKWIHK 750

Query:    52 SAKEKGKFEDMAKADKARYEREMK---------TYIPPKGETKKKFKDPNAPKRPPSAFF 102
             + +++ ++E++ + D  +   E+          T    + + K KF D    K PP+++ 
Sbjct:   751 ALEQRKEYEEIMR-DYIQKHPELNISEEGITKSTLTKAERQLKDKF-DGRPTKPPPNSYS 924

Query:   103 LFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYR 162
             L+C+E    +K + P     +      + W   +  +K  Y KK  + K+ YE ++  + 
Sbjct:   925 LYCAELMANMK-DVPST---ERMVLCSQQWKLLSQKEKDAYHKKCDQKKKDYEVELLRF- 1089

Query:   163 AKGKPDAAKKGVVKAEK--SKKKKEEEEDEEDEEDEE 197
              +  P+  ++ V+  EK  +  KK+       +  +E
Sbjct:  1090 LESLPEEEQQRVLGEEKMLNINKKQTTSPASKKPSQE 1200


>D14315 delta-crystallin enhancer binding protein, partial sequence.
        Length = 1320

  Plus Strand HSPs:

 Score = 248 (87.3 bits), Expect = 9.9e-20, P = 9.9e-20
 Identities = 60/167 (35%), Positives = 96/167 (57%), Frame = +3

Query:    32 DASVNFSEFSKKCSERWKT-MSAKEKGKFEDMAKADK--ARYEREMKTYIPPKGETK-KK 87
             D S N  E     +E + +  SA       D  + +K  A+  + +K   P K + + KK
Sbjct:   204 DESFNPGEEDDDVAEEFDSNASASSSSGDGDSDRGEKKPAKKAKIVKDRKPRKKQVESKK 383

Query:    88 FKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKA 147
              KDPNAPKRP SA+ L+ +  R KIK +HPG+SI D++KK GE+W   + + K+ +++KA
Sbjct:   384 GKDPNAPKRPMSAYMLWLNANREKIKSDHPGISITDLSKKAGELWKAMSKEKKEEWDRKA 563

Query:   148 AKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEE 198
                K  YEK +  Y    K +++K      E+SKKKK+++E +   + E++
Sbjct:   564 EDAKRDYEKAMKEYSVGNKSESSKM-----ERSKKKKKKQEKQMKGKGEKK 701

 Score = 147 (51.7 bits), Expect = 1.6e-07, P = 1.6e-07
 Identities = 55/172 (31%), Positives = 83/172 (48%), Frame = +3

Query:     2 KG-DPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 60
             KG DP  P+  MS+Y  ++   RE+ K  HP  S+  ++ SKK  E WK MS ++K +++
Sbjct:   381 KGKDPNAPKRPMSAYMLWLNANREKIKSDHPGISI--TDLSKKAGELWKAMSKEKKEEWD 554

Query:    61 DMAKADKARYEREMKTY-IPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGL 119
               A+  K  YE+ MK Y +  K E+ K  +     K+          E + K KGE  G 
Sbjct:   555 RKAEDAKRDYEKAMKEYSVGNKSESSKMERSKKKKKK---------QEKQMKGKGEKKGA 707

Query:   120 ------SIGDVAKKLGEMWNN---TAADDKQPYEKKAAKLKEKYEKDIAAYRAKG--KPD 168
                   S    AK + E + +    ++D+    E      KE+ E+   A R K    P 
Sbjct:   708 ASKSSSSTKSSAKTMSESFKSKEFVSSDESSSAESN----KEQEEEHRGANRPKPHKSPQ 875

Query:   169 AAKKG 173
              A  G
Sbjct:   876 QAPSG 890


>X76774 P.sativum mRNA for HMG1 protein
        Length = 807

  Plus Strand HSPs:

 Score = 245 (86.2 bits), Expect = 1.1e-19, P = 1.1e-19
 Identities = 55/135 (40%), Positives = 75/135 (55%), Frame = +3

Query:    79 PPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIK-GEHPGLSIGDVAKKLGEMWNNTAA 137
             P KG   K+ KDPN PKRPPSAFF+F  ++R + K G     ++  V K  G  W +   
Sbjct:   117 PAKG---KEPKDPNKPKRPPSAFFVFMEDFRKQFKKGNADNKAVSAVGKAAGAKWKSMTE 287

Query:   138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197
              +K PY  KA K K +YEK + +Y  K           +AE     +EEEE E+ E +  
Sbjct:   288 AEKAPYAAKAEKRKAEYEKSMKSYNKK-----------QAEGPAAVEEEEESEKSESEVH 434

Query:   198 EEEDEEDEDEEEDDDD 213
             +E D+E+E EEEDDD+
Sbjct:   435 DENDDEEESEEEDDDE 482

 Score = 239 (84.1 bits), Expect = 4.8e-19, P = 4.8e-19
 Identities = 56/136 (41%), Positives = 75/136 (55%), Frame = +3

Query:    79 PPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIK-GEHPGLSIGDVAKKLGEMWNNTAA 137
             P KG   K+ KDPN PKRPPSAFF+F  ++R + K G     ++  V K  G  W +   
Sbjct:   117 PAKG---KEPKDPNKPKRPPSAFFVFMEDFRKQFKKGNADNKAVSAVGKAAGAKWKSMTE 287

Query:   138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197
              +K PY  KA K K +YEK + +Y  K           +AE     +EEEE E+ E +  
Sbjct:   288 AEKAPYAAKAEKRKAEYEKSMKSYNKK-----------QAEGPAAVEEEEESEKSESEVH 434

Query:   198 EEEDEEDEDEEEDDDDE 214
             +E D+E+E EEEDDD E
Sbjct:   435 DENDDEEESEEEDDD-E 482

 Score = 122 (42.9 bits), Expect = 0.00017, P = 0.00017
 Identities = 26/80 (32%), Positives = 42/80 (52%), Frame = +3

Query:     4 DPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMA 63
             DP KP+   S++  F++  R++ KK + D     S   K    +WK+M+  EK  +   A
Sbjct:   141 DPNKPKRPPSAFFVFMEDFRKQFKKGNADNKA-VSAVGKAAGAKWKSMTEAEKAPYAAKA 317

Query:    64 KADKARYEREMKTYIPPKGE 83
             +  KA YE+ MK+Y   + E
Sbjct:   318 EKRKAEYEKSMKSYNKKQAE 377


>L28094 Barley mRNA sequence.
        Length = 942

  Plus Strand HSPs:

 Score = 244 (85.9 bits), Expect = 1.2e-19, P = 1.2e-19
 Identities = 51/136 (37%), Positives = 82/136 (60%), Frame = +3

Query:    79 PPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHP-GLSIGDVAKKLGEMWNNTAA 137
             PP+G  +++ + P +P+  P AFF+   E+R + K ++P   S+  V K  GE W + + 
Sbjct:   177 PPRGRRERQARTPTSPRGTP-AFFVSMGEFREEFKQKNPKNKSVAPVGKAAGERWKSLSE 353

Query:   138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197
              +K P+  KA KLK +Y K IAAY  KG+  AA     K   +K+ +EE+E+E D+   E
Sbjct:   354 PEKAPFVAKANKLKGEYNKAIAAYN-KGESTAAAP---KKAAAKEVEEEDEEESDKSKSE 521

Query:   198 EEEDEEDEDEEEDDDDE 214
               +D++DE  +ED+DD+
Sbjct:   522 INDDDDDEGSDEDEDDD 572

 Score = 243 (85.5 bits), Expect = 1.5e-19, P = 1.5e-19
 Identities = 53/135 (39%), Positives = 83/135 (61%), Frame = +3

Query:    79 PPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHP-GLSIGDVAKKLGEMWNNTAA 137
             PP+G  +++ + P +P+  P AFF+   E+R + K ++P   S+  V K  GE W + + 
Sbjct:   177 PPRGRRERQARTPTSPRGTP-AFFVSMGEFREEFKQKNPKNKSVAPVGKAAGERWKSLSE 353

Query:   138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197
              +K P+  KA KLK +Y K IAAY  KG+  AA     K   +K+ +EE+E+E D+   E
Sbjct:   354 PEKAPFVAKANKLKGEYNKAIAAYN-KGESTAAAP---KKAAAKEVEEEDEEESDKSKSE 521

Query:   198 EEEDEEDE--DEEEDDDD 213
               +D++DE  DE+EDDD+
Sbjct:   522 INDDDDDEGSDEDEDDDE 575

 Score = 104 (36.6 bits), Expect = 0.031, P = 0.031
 Identities = 30/80 (37%), Positives = 41/80 (51%), Frame = +3

Query:     5 PKKPRGKMSSYAFFVQT--CREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDM 62
             P  PRG   + AFFV     REE K+K+P  + + +   K   ERWK++S  EK  F   
Sbjct:   213 PTSPRG---TPAFFVSMGEFREEFKQKNPK-NKSVAPVGKAAGERWKSLSEPEKAPFVAK 380

Query:    63 AKADKARYEREMKTYIPPKGET 84
             A   K  Y + +  Y   KGE+
Sbjct:   381 ANKLKGEYNKAIAAY--NKGES 440


>I14731 Sequence 10 from patent US 5451670.
        Length = 2188

  Plus Strand HSPs:

 Score = 97 (34.1 bits), Expect = 0.29, P = 0.25
 Identities = 46/171 (26%), Positives = 86/171 (50%), Frame = +1

Query:    45 SERWKTMSAKEKGKFEDMA----KADK--ARYEREMKTYIPPKGETKKKFK--DPNAPKR 96
             +E  K ++AK +   E+M     K DK  A+ E + K     K E K  F+  D NA K+
Sbjct:   991 AEDLKKLAAKLEKHSEEMGTRDLKLDKLAAKLEHQTKELEKQKSELKSHFQYMDFNAGKQ 1170

Query:    97 PPSAFFLFCSEYR----PKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKE 152
                   L    Y       +K E P + +G  AK+  E      ++ K+ +E+   + KE
Sbjct:  1171 KKMVTKLE-EHYEWMVTRNVKLEIPAIKVGQQAKESEEQ----KSELKEHHEEMGQQAKE 1335

Query:   153 KYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDD 212
               E+     +++ K    + G  +A++S+++K E ++  +E  ++ +E EE + E ++  
Sbjct:  1336 SEEQ-----KSELKEHHEEMGQ-QAKESEEQKSELKEHHEEMGQQAKESEEQKSELKEHH 1497

Query:   213 DE 214
             +E
Sbjct:  1498 EE 1503

 Score = 89 (31.3 bits), Expect = 2.3, P = 0.90
 Identities = 51/192 (26%), Positives = 91/192 (47%), Frame = +1

Query:    38 SEFSKKCSERWKTMSAKEKGKFEDMAKADK--ARYEREMKTYIPPKGETKKKFK--DPNA 93
             +E  KK + + +  S +E G   D+ K DK  A+ E + K     K E K  F+  D NA
Sbjct:   991 AEDLKKLAAKLEKHS-EEMGT-RDL-KLDKLAAKLEHQTKELEKQKSELKSHFQYMDFNA 1161

Query:    94 PKRPPSAFFLFCSEYR----PKIKGEHPGLSIGDVAKK-------LGEMWNNTAADDKQP 142
              K+      L    Y       +K E P + +G  AK+       L E         K+ 
Sbjct:  1162 GKQKKMVTKLE-EHYEWMVTRNVKLEIPAIKVGQQAKESEEQKSELKEHHEEMGQQAKES 1338

Query:   143 YEKKAAKLKEKYE------KDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDE 196
              E+K+ +LKE +E      K+    +++ K    + G  +A++S+++K E ++  +E  +
Sbjct:  1339 EEQKS-ELKEHHEEMGQQAKESEEQKSELKEHHEEMGQ-QAKESEEQKSELKEHHEEMGQ 1512

Query:   197 EEEEDEEDEDEEEDDDDE 214
             + +E EE + E ++  +E
Sbjct:  1513 QAKESEEQKSELKEHHEE 1566

  Minus Strand HSPs:

 Score = 249 (87.7 bits), Expect = 1.8e-19, P = 1.8e-19
 Identities = 46/64 (71%), Positives = 59/64 (92%), Frame = -2

Query:   151 KEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEED 210
             +++ EKDIAAYRAKGK DA KK V KAEKSKKKKEEEEDE+++E++EE+E+EE+E+EE+D
Sbjct:   264 RKETEKDIAAYRAKGKVDAGKKVVAKAEKSKKKKEEEEDEDEDEEDEEDEEEEEEEEEDD 85

Query:   211 DDDE 214
             DDDE
Sbjct:    84 DDDE 73


>AJ002391 Solanum tuberosum mRNA for high mobility group protein
          Length = 734

  Plus Strand HSPs:

 Score = 241 (84.8 bits), Expect = 3.2e-19, P = 3.2e-19
 Identities = 55/140 (39%), Positives = 82/140 (58%), Frame = +3

Query:    64 KADKARYEREMKTYIPPKGETKKKFK----DPNAPKRPPSAFFLFCSEYRPKIKGEHPG- 118
             K  K++ + + K  +  K    KK K    DPN PKRPPSAFF+F  E+R   K +HP  
Sbjct:    96 KGAKSKAKADTKLGVRKKATESKKAKNAAKDPNKPKRPPSAFFVFMEEFRKTYKEKHPNN 275

Query:   119 LSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAE 178
              S+  V K  G+ W   + ++K PY+ KA K K +Y+K++ AY  K    AA  G    E
Sbjct:   276 KSVAVVGKAGGDKWKQLSDEEKAPYQAKAEKRKAEYQKNMDAYNKKL---AA--GDADDE 440

Query:   179 KSKKKKEEEEDEEDEEDEEEEEDEE 203
             +S K K E  D+++++D  E+ED++
Sbjct:   441 ESDKSKSEVHDDDEDDDGSEQEDDD 515

 Score = 228 (80.3 bits), Expect = 7.6e-18, P = 7.6e-18
 Identities = 60/149 (40%), Positives = 82/149 (55%), Frame = +3

Query:    64 KADKARYEREMKTYIPPKGETKKKFK----DPNAPKRPPSAFFLFCSEYRPKIKGEHPG- 118
             K  K++ + + K  +  K    KK K    DPN PKRPPSAFF+F  E+R   K +HP  
Sbjct:    96 KGAKSKAKADTKLGVRKKATESKKAKNAAKDPNKPKRPPSAFFVFMEEFRKTYKEKHPNN 275

Query:   119 LSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAE 178
              S+  V K  G+ W   + ++K PY+ KA K K +Y+K++ AY  K    AA  G    E
Sbjct:   276 KSVAVVGKAGGDKWKQLSDEEKAPYQAKAEKRKAEYQKNMDAYNKKL---AA--GDADDE 440

Query:   179 KSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDD 212
             +S K K E  D+ DE+D        D  E+EDDD
Sbjct:   441 ESDKSKSEVHDD-DEDD--------DGSEQEDDD 515

 Score = 124 (43.7 bits), Expect = 8.1e-05, P = 8.1e-05
 Identities = 23/74 (31%), Positives = 44/74 (59%), Frame = +3

Query:     4 DPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMA 63
             DP KP+   S++  F++  R+ +K+KHP+ + + +   K   ++WK +S +EK  ++  A
Sbjct:   186 DPNKPKRPPSAFFVFMEEFRKTYKEKHPN-NKSVAVVGKAGGDKWKQLSDEEKAPYQAKA 362

Query:    64 KADKARYEREMKTY 77
             +  KA Y++ M  Y
Sbjct:   363 EKRKAEYQKNMDAY 404

 Score = 87 (30.6 bits), Expect = 2.4, P = 0.91
 Identities = 21/68 (30%), Positives = 38/68 (55%), Frame = +3

Query:   149 KLKEKYEKDIAAYRAKGKPDAAK--KGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDED 206
             K K+  +++ A Y+AK +   A+  K +    K     + +++E D+   E  +D+ED+D
Sbjct:   312 KWKQLSDEEKAPYQAKAEKRKAEYQKNMDAYNKKLAAGDADDEESDKSKSEVHDDDEDDD 491

Query:   207 --EEEDDD 212
               E+EDDD
Sbjct:   492 GSEQEDDD 515


>S50213 HMG1-related DNA-binding protein [mice, mRNA, 2569 nt].
        Length = 2569

  Plus Strand HSPs:

 Score = 247 (86.9 bits), Expect = 3.3e-19, P = 3.3e-19
 Identities = 56/179 (31%), Positives = 95/179 (53%), Frame = +2

Query:    28 KKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARYEREMKTYIPPKGETKKK 87
             ++  D +  F   +   S   +  S +E+ K E + +A  A+ +R+ +     K    KK
Sbjct:  1532 EEEEDVAEEFDSNASASSSSNEGDSDREEKKREQLKRAKMAK-DRKSRR----KSSEAKK 1696

Query:    88 FKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKA 147
              KDPNAPKRP SA+ L+ +  R KIK +HPG+SI D++KK GE+W   + + K+ +++KA
Sbjct:  1697 GKDPNAPKRPMSAYMLWLNASREKIKSDHPGISITDLSKKAGEIWKGMSKEKKEEWDRKA 1876

Query:   148 AKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDED 206
                + +YEK +  Y   G+ D++K+   K +K  K K E++         +    +  D
Sbjct:  1877 EDARREYEKAMKEYEG-GRGDSSKRDKSKKKKKVKAKMEKKSTPSRGSSSKSSSRQLSD 2050

 Score = 224 (78.9 bits), Expect = 9.6e-17, P = 9.6e-17
 Identities = 62/192 (32%), Positives = 98/192 (51%), Frame = +2

Query:    28 KKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARYEREMKTYIPPKGETKKK 87
             ++  D +  F   +   S   +  S +E+ K E + +A  A+ +R+ +     K    KK
Sbjct:  1532 EEEEDVAEEFDSNASASSSSNEGDSDREEKKREQLKRAKMAK-DRKSRR----KSSEAKK 1696

Query:    88 FKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKA 147
              KDPNAPKRP SA+ L+ +  R KIK +HPG+SI D++KK GE+W   + + K+ +++KA
Sbjct:  1697 GKDPNAPKRPMSAYMLWLNASREKIKSDHPGISITDLSKKAGEIWKGMSKEKKEEWDRKA 1876

Query:   148 AKLKEKYEKDIAAYRAKGKPDAAK------KGVVKAEKSKKK--------KEEEEDEEDE 193
                + +YEK +  Y   G+ D++K      K  VKA+  KK         K       D 
Sbjct:  1877 EDARREYEKAMKEYEG-GRGDSSKRDKSKKKKKVKAKMEKKSTPSRGSSSKSSSRQLSDS 2053

Query:   194 EDEEE--EEDEEDEDEEE 209
                +E    DE    E +
Sbjct:  2054 FKSKEFVSSDESSSGENK 2107

 Score = 151 (53.2 bits), Expect = 5.5e-08, P = 5.5e-08
 Identities = 33/94 (35%), Positives = 53/94 (56%), Frame = +2

Query:     2 KG-DPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 60
             KG DP  P+  MS+Y  ++   RE+ K  HP  S+  ++ SKK  E WK MS ++K +++
Sbjct:  1694 KGKDPNAPKRPMSAYMLWLNASREKIKSDHPGISI--TDLSKKAGEIWKGMSKEKKEEWD 1867

Query:    61 DMAKADKARYEREMKTYIPPKGETKKKFKDPNAPK 95
               A+  +  YE+ MK Y   +G++ K+ K     K
Sbjct:  1868 RKAEDARREYEKAMKEYEGGRGDSSKRDKSKKKKK 1972


>M61725 Rat transcription factor UBF2 mRNA.
        Length = 2452

  Plus Strand HSPs:

 Score = 190 (66.9 bits), Expect = 4.1e-13, P = 4.1e-13
 Identities = 53/181 (29%), Positives = 87/181 (48%), Frame = +3

Query:    48 WKTMSAKEKGKFEDMAKADKARYEREMKTYIPPKGETK--KKFKDPNAPKRPP-SAFFLF 104
             W  M  KEK  +   A  D+ RYERE+     P   T   KK K    PK+PP + +  F
Sbjct:  1710 WNNMEKKEKLMWIKKAAEDQKRYERELSEMRAPPAATNSSKKMKFQGEPKKPPMNGYQKF 1889

Query:   105 CSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAK 164
               E      GE   L + +   ++G  W   +   K+ Y+K A + + +Y+  +  +   
Sbjct:  1890 SQELLSN--GELNHLPLKERMVEIGSRWQRISQSQKEHYKKLAEEQQRQYKVHLDLWVKS 2063

Query:   165 GKP-DAA---------KKGVVKAE----KSKKKKEEEEDEEDEEDEEEEEDEEDEDEEED 210
               P D A         +K + K      KS +   + + E +E+D+EE++D++DE+EEED
Sbjct:  2064 LSPQDRAAYKEYISNKRKNMTKLRGPNPKSSRTTLQSKSESEEDDDEEDDDDDDEEEEED 2243

Query:   211 DDD 213
             D++
Sbjct:  2244 DEN 2252

 Score = 166 (58.4 bits), Expect = 3.8e-19, Sum P(2) = 3.8e-19
 Identities = 52/181 (28%), Positives = 92/181 (50%), Frame = +3

Query:     1 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 60
             GKG  +KP+  +S+   F +  R + +++ P+ S   SE ++  +  W  +S K+K K++
Sbjct:  1353 GKGGSEKPKRPVSAMFIFSEEKRRQLQEERPELSE--SELTRLLARMWNDLSEKKKAKYK 1526

Query:    61 DMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFL-FCSEYRPKIKGEHPGL 119
                 A KA+ ER+      P GE + + K P +PKR    +      +Y  + K +    
Sbjct:  1527 AREAALKAQSERK------PGGEREDRGKLPESPKRAEEIWQQSVIGDYLARFKNDRVK- 1685

Query:   120 SIGDVAKKLGEM-WNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAK-GKPDAAKKGVVKA 177
                  A K  EM WNN    +K  + KKAA+ +++YE++++  RA     +++KK   + 
Sbjct:  1686 -----ALKAMEMTWNNMEKKEKLMWIKKAAEDQKRYERELSEMRAPPAATNSSKKMKFQG 1850

Query:   178 EKSK 181
             E  K
Sbjct:  1851 EPKK 1862

 Score = 140 (49.3 bits), Expect = 1.1e-13, Sum P(2) = 1.1e-13
 Identities = 42/145 (28%), Positives = 68/145 (46%), Frame = +3

Query:    40 FSKKCSERWKTMSAKEKGKFEDMAKADKARYEREMKTY-IPPKGETKKKFKDPNA----- 93
             + KKC ++ K    +     E + + ++ R   E K   I  K  T    K P+      
Sbjct:  1182 YHKKCDQKKKDYEVELLRFLESLPEEEQQRVLGEEKMLNINKKQTTSPASKKPSQEGGKG 1361

Query:    94 ----PKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAK 149
                 PKRP SA F+F  E R +++ E P LS  ++ + L  MWN+ +   K  Y+ + A 
Sbjct:  1362 GSEKPKRPVSAMFIFSEEKRRQLQEERPELSESELTRLLARMWNDLSEKKKAKYKAREAA 1541

Query:   150 LKEKYEKDIAAYRA-KGK-PDAAKK 172
             LK + E+     R  +GK P++ K+
Sbjct:  1542 LKAQSERKPGGEREDRGKLPESPKR 1616

 Score = 137 (48.2 bits), Expect = 3.1e-13, Sum P(2) = 3.1e-13
 Identities = 48/158 (30%), Positives = 75/158 (47%), Frame = +3

Query:    28 KKHPD-ASVNFSEFS-KKCSERWKTMSAKEKGKFEDMAKADKARYEREMKTYIPPKGETK 85
             + H D   V F +FS   C  +W  +S  E  KF  + +      E     Y   KG  K
Sbjct:   414 ESHMDWEKVAFKDFSGDMCKLKWVEIS-NEVRKFRTLTELILDAQEHVKNPY---KG--K 575

Query:    86 KKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEK 145
             K  K P+ PK+P + +F F  E R K    HP +S  D+ K L + +       K  Y +
Sbjct:   576 KLKKHPDFPKKPLTPYFRFFMEKRAKYAKLHPEMSNLDLTKILSKKYKELPEKKKMKYIQ 755

Query:   146 KAAKLKEKYEKDIAAYRAKGKPDA---AKKGVVKAEKSKKKKE 185
                + K+++E+++A +R +  PD    AKK  +  EK K  ++
Sbjct:   756 DFQREKQEFERNLARFR-EDHPDLIQNAKKSDIP-EKPKTPQQ 878

 Score = 109 (38.4 bits), Expect = 0.012, P = 0.012
 Identities = 41/168 (24%), Positives = 83/168 (49%), Frame = +3

Query:    47 RWKTMSAKEKGKFEDMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCS 106
             RW+ +S  +K  ++ +A+  + +Y+  +  ++        K   P    +  +A+  + S
Sbjct:  1962 RWQRISQSQKEHYKKLAEEQQRQYKVHLDLWV--------KSLSP----QDRAAYKEYIS 2105

Query:   107 EYRP---KIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRA 163
               R    K++G +P  S   +  K     ++   DD    E       E+ E D      
Sbjct:  2106 NKRKNMTKLRGPNPKSSRTTLQSKSESEEDDDEEDDDDDDE-------EEEEDD-----E 2249

Query:   164 KGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
              G  D+++ G   +E S +  E E+ +E+E+D+++E+D+ED+DE+ED++ E
Sbjct:  2250 NG--DSSEDGGDSSESSSED-ESEDGDENEDDDDDEDDDEDDDEDEDNESE 2393

 Score = 107 (37.7 bits), Expect = 3.8e-19, Sum P(2) = 3.8e-19
 Identities = 18/47 (38%), Positives = 36/47 (76%), Frame = +3

Query:   168 DAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             D+++ G   +E S +  E E+ +E+E+D+++E+D+ED+DE+ED++ E
Sbjct:  2256 DSSEDGGDSSESSSED-ESEDGDENEDDDDDEDDDEDDDEDEDNESE 2393

 Score = 107 (37.7 bits), Expect = 2.5e-09, Sum P(2) = 2.5e-09
 Identities = 38/151 (25%), Positives = 70/151 (46%), Frame = +3

Query:     5 PKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAK 64
             PKKP   ++ Y  F    R ++ K HP+ S N  + +K  S+++K +  K+K K+    +
Sbjct:   600 PKKP---LTPYFRFFMEKRAKYAKLHPEMS-NL-DLTKILSKKYKELPEKKKMKYIQDFQ 764

Query:    65 ADKARYEREMKTYI---PPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSI 121
              +K  +ER +  +    P   +  KK   P  PK P   ++    +   K++   P   +
Sbjct:   765 REKQEFERNLARFREDHPDLIQNAKKSDIPEKPKTPQQLWYTHEKKVYLKVR---PDEIM 935

Query:   122 GDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYE 155
              D  +K  E+  +     K    K   +LK+K++
Sbjct:   936 RDYIQKHPELNISEEGITKSTLTKAERQLKDKFD 1037

 Score = 107 (37.7 bits), Expect = 0.021, P = 0.021
 Identities = 42/213 (19%), Positives = 96/213 (45%), Frame = +3

Query:     2 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 61
             +G+PKKP   M+ Y  F Q      +  H    +   E   +   RW+ +S  +K  ++ 
Sbjct:  1845 QGEPKKP--PMNGYQKFSQELLSNGELNH----LPLKERMVEIGSRWQRISQSQKEHYKK 2006

Query:    62 MAKADKARYEREMKTYIPPKG-ETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS 120
             +A+  + +Y+  +  ++     + +  +K+  + KR          +   K++G +P  S
Sbjct:  2007 LAEEQQRQYKVHLDLWVKSLSPQDRAAYKEYISNKR----------KNMTKLRGPNPKSS 2156

Query:   121 IGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKS 180
                +  K     ++   DD    E++    +E  E   ++       +++ +   ++E  
Sbjct:  2157 RTTLQSKSESEEDDDEEDDDDDDEEE----EEDDENGDSSEDGGDSSESSSED--ESEDG 2318

Query:   181 KKKKEEEEDEEDEEDEEEEEDEEDEDEEED-----DDDE 214
              + +++++DE+D+ED++E+ED E E          D  +
Sbjct:  2319 DENEDDDDDEDDDEDDDEDEDNESEGSSSSSSSSGDSSD 2435

 Score = 105 (37.0 bits), Expect = 0.035, P = 0.035
 Identities = 42/213 (19%), Positives = 97/213 (45%), Frame = +3

Query:     2 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 61
             +G+PKKP   M+ Y  F Q      +  H    +   E   +   RW+ +S  +K  ++ 
Sbjct:  1845 QGEPKKP--PMNGYQKFSQELLSNGELNH----LPLKERMVEIGSRWQRISQSQKEHYKK 2006

Query:    62 MAKADKARYEREMKTYIPPKG-ETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS 120
             +A+  + +Y+  +  ++     + +  +K+  + KR          +   K++G +P  S
Sbjct:  2007 LAEEQQRQYKVHLDLWVKSLSPQDRAAYKEYISNKR----------KNMTKLRGPNPKSS 2156

Query:   121 IGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKS 180
                +  K     ++   DD    E++    +E  E   ++       +++ +   ++E  
Sbjct:  2157 RTTLQSKSESEEDDDEEDDDDDDEEE----EEDDENGDSSEDGGDSSESSSED--ESEDG 2318

Query:   181 KKKKEEEEDEEDEEDEEEEEDEEDEDEE-------EDDDDE 214
              + +++++DE+D+ED++E+ED E E          +  D +
Sbjct:  2319 DENEDDDDDEDDDEDDDEDEDNESEGSSSSSSSSGDSSDSD 2441

 Score = 102 (35.9 bits), Expect = 0.078, P = 0.075
 Identities = 47/188 (25%), Positives = 90/188 (47%), Frame = +3

Query:    35 VNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARYEREMKTYIPPKGETKK-KFK-DPN 92
             + ++   KK    W   +A+++ ++E        R   EM+        +KK KF+ +P 
Sbjct:  1704 MTWNNMEKKEKLMWIKKAAEDQKRYE--------RELSEMRAPPAATNSSKKMKFQGEPK 1859

Query:    93 APKRPPSAFFLFCSEYRPKIKGEHPGLS-----IGD----VAKKLGEMWNNTAADDKQPY 143
              P  P + +  F  E     +  H  L      IG     +++   E +   A + ++ Y
Sbjct:  1860 KP--PMNGYQKFSQELLSNGELNHLPLKERMVEIGSRWQRISQSQKEHYKKLAEEQQRQY 2033

Query:   144 EKKAAK-LKEKYEKDIAAYRA----KGKPDAAKKGV-VKAEKSK-KKKEEEEDEEDEEDE 196
             +      +K    +D AAY+     K K     +G   K+ ++  + K E E+++DEED+
Sbjct:  2034 KVHLDLWVKSLSPQDRAAYKEYISNKRKNMTKLRGPNPKSSRTTLQSKSESEEDDDEEDD 2213

Query:   197 EEEEDEEDEDEEEDDDDE 214
             +++++EE+ED+E  D  E
Sbjct:  2214 DDDDEEEEEDDENGDSSE 2267

 Score = 80 (28.2 bits), Expect = 2.4e-16, Sum P(2) = 2.4e-16
 Identities = 12/28 (42%), Positives = 20/28 (71%), Frame = +3

Query:   187 EEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             +  E   EDE E+ DE ++D++++DDDE
Sbjct:  2277 DSSESSSEDESEDGDENEDDDDDEDDDE 2360

 Score = 74 (26.0 bits), Expect = 0.0090, Sum P(2) = 0.0090
 Identities = 45/200 (22%), Positives = 80/200 (40%), Frame = +3

Query:     3 GDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDM 62
             G P KP    +SY+ +   C E          V  +E    CS++WK +S KEK  +   
Sbjct:  1038 GRPTKP--PPNSYSLY---CAELMANMK---DVPSTERMVLCSQQWKLLSQKEKDAYHKK 1193

Query:    63 AKADKARYEREMKTYIP--PKGETKKKFKDPNA----PKRPPSAFFLFCSEYRPKIKGEH 116
                 K  YE E+  ++   P+ E ++   +        K+  S      S+   K   E 
Sbjct:  1194 CDQKKKDYEVELLRFLESLPEEEQQRVLGEEKMLNINKKQTTSPASKKPSQEGGKGGSEK 1373

Query:   117 PGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYR-AKGKPDAAKKGVV 175
             P   +  +     E       +  +  E +  +L  +   D++  + AK K   A++  +
Sbjct:  1374 PKRPVSAMFIFSEEKRRQLQEERPELSESELTRLLARMWNDLSEKKKAKYK---AREAAL 1544

Query:   176 KAEKSKKKKEEEEDEEDEEDEEEEEDE 202
             KA+  +K   E ED     +  +  +E
Sbjct:  1545 KAQSERKPGGEREDRGKLPESPKRAEE 1625


>M61726 Rat transcription factor UBF1 mRNA.
        Length = 2563

  Plus Strand HSPs:

 Score = 190 (66.9 bits), Expect = 4.2e-13, P = 4.2e-13
 Identities = 53/181 (29%), Positives = 87/181 (48%), Frame = +3

Query:    48 WKTMSAKEKGKFEDMAKADKARYEREMKTYIPPKGETK--KKFKDPNAPKRPP-SAFFLF 104
             W  M  KEK  +   A  D+ RYERE+     P   T   KK K    PK+PP + +  F
Sbjct:  1821 WNNMEKKEKLMWIKKAAEDQKRYERELSEMRAPPAATNSSKKMKFQGEPKKPPMNGYQKF 2000

Query:   105 CSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAK 164
               E      GE   L + +   ++G  W   +   K+ Y+K A + + +Y+  +  +   
Sbjct:  2001 SQELLSN--GELNHLPLKERMVEIGSRWQRISQSQKEHYKKLAEEQQRQYKVHLDLWVKS 2174

Query:   165 GKP-DAA---------KKGVVKAE----KSKKKKEEEEDEEDEEDEEEEEDEEDEDEEED 210
               P D A         +K + K      KS +   + + E +E+D+EE++D++DE+EEED
Sbjct:  2175 LSPQDRAAYKEYISNKRKNMTKLRGPNPKSSRTTLQSKSESEEDDDEEDDDDDDEEEEED 2354

Query:   211 DDD 213
             D++
Sbjct:  2355 DEN 2363

 Score = 166 (58.4 bits), Expect = 4.1e-19, Sum P(2) = 4.1e-19
 Identities = 52/181 (28%), Positives = 92/181 (50%), Frame = +3

Query:     1 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 60
             GKG  +KP+  +S+   F +  R + +++ P+ S   SE ++  +  W  +S K+K K++
Sbjct:  1464 GKGGSEKPKRPVSAMFIFSEEKRRQLQEERPELSE--SELTRLLARMWNDLSEKKKAKYK 1637

Query:    61 DMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFL-FCSEYRPKIKGEHPGL 119
                 A KA+ ER+      P GE + + K P +PKR    +      +Y  + K +    
Sbjct:  1638 AREAALKAQSERK------PGGEREDRGKLPESPKRAEEIWQQSVIGDYLARFKNDRVK- 1796

Query:   120 SIGDVAKKLGEM-WNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAK-GKPDAAKKGVVKA 177
                  A K  EM WNN    +K  + KKAA+ +++YE++++  RA     +++KK   + 
Sbjct:  1797 -----ALKAMEMTWNNMEKKEKLMWIKKAAEDQKRYERELSEMRAPPAATNSSKKMKFQG 1961

Query:   178 EKSK 181
             E  K
Sbjct:  1962 EPKK 1973

 Score = 143 (50.3 bits), Expect = 4.0e-14, Sum P(2) = 4.0e-14
 Identities = 43/181 (23%), Positives = 90/181 (49%), Frame = +3

Query:     5 PKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAK 64
             PKKP   ++ Y  F    R ++ K HP+ S N  + +K  S+++K +  K+K K+    +
Sbjct:   600 PKKP---LTPYFRFFMEKRAKYAKLHPEMS-NL-DLTKILSKKYKELPEKKKMKYIQDFQ 764

Query:    65 ADKARYEREMKTYI---PPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSI 121
              +K  +ER +  +    P   +  KK   P  PK P   ++    +   K++   P  + 
Sbjct:   765 REKQEFERNLARFREDHPDLIQNAKKSDIPEKPKTPQQLWYTHEKKVYLKVR---PDATT 935

Query:   122 GDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKP-DAAKKGVVKAEKS 180
              +V   LG+ W+  +   +  +  KA + +++YE+ +  Y  K    + +++G+ K+  +
Sbjct:   936 KEVKDSLGKQWSQLSDKKRLKWIHKALEQRKEYEEIMRDYIQKHPELNISEEGITKSTLT 1115

Query:   181 KKKKE 185
             K +++
Sbjct:  1116 KAERQ 1130

 Score = 140 (49.3 bits), Expect = 1.2e-13, Sum P(2) = 1.2e-13
 Identities = 42/145 (28%), Positives = 68/145 (46%), Frame = +3

Query:    40 FSKKCSERWKTMSAKEKGKFEDMAKADKARYEREMKTY-IPPKGETKKKFKDPNA----- 93
             + KKC ++ K    +     E + + ++ R   E K   I  K  T    K P+      
Sbjct:  1293 YHKKCDQKKKDYEVELLRFLESLPEEEQQRVLGEEKMLNINKKQTTSPASKKPSQEGGKG 1472

Query:    94 ----PKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAK 149
                 PKRP SA F+F  E R +++ E P LS  ++ + L  MWN+ +   K  Y+ + A 
Sbjct:  1473 GSEKPKRPVSAMFIFSEEKRRQLQEERPELSESELTRLLARMWNDLSEKKKAKYKAREAA 1652

Query:   150 LKEKYEKDIAAYRA-KGK-PDAAKK 172
             LK + E+     R  +GK P++ K+
Sbjct:  1653 LKAQSERKPGGEREDRGKLPESPKR 1727

 Score = 137 (48.2 bits), Expect = 3.3e-13, Sum P(2) = 3.3e-13
 Identities = 48/158 (30%), Positives = 75/158 (47%), Frame = +3

Query:    28 KKHPD-ASVNFSEFS-KKCSERWKTMSAKEKGKFEDMAKADKARYEREMKTYIPPKGETK 85
             + H D   V F +FS   C  +W  +S  E  KF  + +      E     Y   KG  K
Sbjct:   414 ESHMDWEKVAFKDFSGDMCKLKWVEIS-NEVRKFRTLTELILDAQEHVKNPY---KG--K 575

Query:    86 KKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEK 145
             K  K P+ PK+P + +F F  E R K    HP +S  D+ K L + +       K  Y +
Sbjct:   576 KLKKHPDFPKKPLTPYFRFFMEKRAKYAKLHPEMSNLDLTKILSKKYKELPEKKKMKYIQ 755

Query:   146 KAAKLKEKYEKDIAAYRAKGKPDA---AKKGVVKAEKSKKKKE 185
                + K+++E+++A +R +  PD    AKK  +  EK K  ++
Sbjct:   756 DFQREKQEFERNLARFR-EDHPDLIQNAKKSDIP-EKPKTPQQ 878

 Score = 109 (38.4 bits), Expect = 0.012, P = 0.012
 Identities = 41/168 (24%), Positives = 83/168 (49%), Frame = +3

Query:    47 RWKTMSAKEKGKFEDMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCS 106
             RW+ +S  +K  ++ +A+  + +Y+  +  ++        K   P    +  +A+  + S
Sbjct:  2073 RWQRISQSQKEHYKKLAEEQQRQYKVHLDLWV--------KSLSP----QDRAAYKEYIS 2216

Query:   107 EYRP---KIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRA 163
               R    K++G +P  S   +  K     ++   DD    E       E+ E D      
Sbjct:  2217 NKRKNMTKLRGPNPKSSRTTLQSKSESEEDDDEEDDDDDDE-------EEEEDD-----E 2360

Query:   164 KGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
              G  D+++ G   +E S +  E E+ +E+E+D+++E+D+ED+DE+ED++ E
Sbjct:  2361 NG--DSSEDGGDSSESSSED-ESEDGDENEDDDDDEDDDEDDDEDEDNESE 2504

 Score = 107 (37.7 bits), Expect = 4.1e-19, Sum P(2) = 4.1e-19
 Identities = 18/47 (38%), Positives = 36/47 (76%), Frame = +3

Query:   168 DAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             D+++ G   +E S +  E E+ +E+E+D+++E+D+ED+DE+ED++ E
Sbjct:  2367 DSSEDGGDSSESSSED-ESEDGDENEDDDDDEDDDEDDDEDEDNESE 2504

 Score = 107 (37.7 bits), Expect = 0.021, P = 0.021
 Identities = 42/213 (19%), Positives = 96/213 (45%), Frame = +3

Query:     2 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 61
             +G+PKKP   M+ Y  F Q      +  H    +   E   +   RW+ +S  +K  ++ 
Sbjct:  1956 QGEPKKP--PMNGYQKFSQELLSNGELNH----LPLKERMVEIGSRWQRISQSQKEHYKK 2117

Query:    62 MAKADKARYEREMKTYIPPKG-ETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS 120
             +A+  + +Y+  +  ++     + +  +K+  + KR          +   K++G +P  S
Sbjct:  2118 LAEEQQRQYKVHLDLWVKSLSPQDRAAYKEYISNKR----------KNMTKLRGPNPKSS 2267

Query:   121 IGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKS 180
                +  K     ++   DD    E++    +E  E   ++       +++ +   ++E  
Sbjct:  2268 RTTLQSKSESEEDDDEEDDDDDDEEE----EEDDENGDSSEDGGDSSESSSED--ESEDG 2429

Query:   181 KKKKEEEEDEEDEEDEEEEEDEEDEDEEED-----DDDE 214
              + +++++DE+D+ED++E+ED E E          D  +
Sbjct:  2430 DENEDDDDDEDDDEDDDEDEDNESEGSSSSSSSSGDSSD 2546

 Score = 105 (37.0 bits), Expect = 0.036, P = 0.035
 Identities = 42/213 (19%), Positives = 97/213 (45%), Frame = +3

Query:     2 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 61
             +G+PKKP   M+ Y  F Q      +  H    +   E   +   RW+ +S  +K  ++ 
Sbjct:  1956 QGEPKKP--PMNGYQKFSQELLSNGELNH----LPLKERMVEIGSRWQRISQSQKEHYKK 2117

Query:    62 MAKADKARYEREMKTYIPPKG-ETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS 120
             +A+  + +Y+  +  ++     + +  +K+  + KR          +   K++G +P  S
Sbjct:  2118 LAEEQQRQYKVHLDLWVKSLSPQDRAAYKEYISNKR----------KNMTKLRGPNPKSS 2267

Query:   121 IGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKS 180
                +  K     ++   DD    E++    +E  E   ++       +++ +   ++E  
Sbjct:  2268 RTTLQSKSESEEDDDEEDDDDDDEEE----EEDDENGDSSEDGGDSSESSSED--ESEDG 2429

Query:   181 KKKKEEEEDEEDEEDEEEEEDEEDEDEE-------EDDDDE 214
              + +++++DE+D+ED++E+ED E E          +  D +
Sbjct:  2430 DENEDDDDDEDDDEDDDEDEDNESEGSSSSSSSSGDSSDSD 2552

 Score = 102 (35.9 bits), Expect = 0.079, P = 0.076
 Identities = 47/188 (25%), Positives = 90/188 (47%), Frame = +3

Query:    35 VNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARYEREMKTYIPPKGETKK-KFK-DPN 92
             + ++   KK    W   +A+++ ++E        R   EM+        +KK KF+ +P 
Sbjct:  1815 MTWNNMEKKEKLMWIKKAAEDQKRYE--------RELSEMRAPPAATNSSKKMKFQGEPK 1970

Query:    93 APKRPPSAFFLFCSEYRPKIKGEHPGLS-----IGD----VAKKLGEMWNNTAADDKQPY 143
              P  P + +  F  E     +  H  L      IG     +++   E +   A + ++ Y
Sbjct:  1971 KP--PMNGYQKFSQELLSNGELNHLPLKERMVEIGSRWQRISQSQKEHYKKLAEEQQRQY 2144

Query:   144 EKKAAK-LKEKYEKDIAAYRA----KGKPDAAKKGV-VKAEKSK-KKKEEEEDEEDEEDE 196
             +      +K    +D AAY+     K K     +G   K+ ++  + K E E+++DEED+
Sbjct:  2145 KVHLDLWVKSLSPQDRAAYKEYISNKRKNMTKLRGPNPKSSRTTLQSKSESEEDDDEEDD 2324

Query:   197 EEEEDEEDEDEEEDDDDE 214
             +++++EE+ED+E  D  E
Sbjct:  2325 DDDDEEEEEDDENGDSSE 2378

 Score = 80 (28.2 bits), Expect = 2.6e-16, Sum P(2) = 2.6e-16
 Identities = 12/28 (42%), Positives = 20/28 (71%), Frame = +3

Query:   187 EEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             +  E   EDE E+ DE ++D++++DDDE
Sbjct:  2388 DSSESSSEDESEDGDENEDDDDDEDDDE 2471

 Score = 74 (26.0 bits), Expect = 0.0095, Sum P(2) = 0.0094
 Identities = 45/200 (22%), Positives = 80/200 (40%), Frame = +3

Query:     3 GDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDM 62
             G P KP    +SY+ +   C E          V  +E    CS++WK +S KEK  +   
Sbjct:  1149 GRPTKP--PPNSYSLY---CAELMANMK---DVPSTERMVLCSQQWKLLSQKEKDAYHKK 1304

Query:    63 AKADKARYEREMKTYIP--PKGETKKKFKDPNA----PKRPPSAFFLFCSEYRPKIKGEH 116
                 K  YE E+  ++   P+ E ++   +        K+  S      S+   K   E 
Sbjct:  1305 CDQKKKDYEVELLRFLESLPEEEQQRVLGEEKMLNINKKQTTSPASKKPSQEGGKGGSEK 1484

Query:   117 PGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYR-AKGKPDAAKKGVV 175
             P   +  +     E       +  +  E +  +L  +   D++  + AK K   A++  +
Sbjct:  1485 PKRPVSAMFIFSEEKRRQLQEERPELSESELTRLLARMWNDLSEKKKAKYK---AREAAL 1655

Query:   176 KAEKSKKKKEEEEDEEDEEDEEEEEDE 202
             KA+  +K   E ED     +  +  +E
Sbjct:  1656 KAQSERKPGGEREDRGKLPESPKRAEE 1736


>X80467 M.musculus HMG1-R-87 gene
        Length = 190

  Plus Strand HSPs:

 Score = 139 (48.9 bits), Expect = 6.2e-19, Sum P(2) = 6.2e-19
 Identities = 25/27 (92%), Positives = 27/27 (100%), Frame = +2

Query:    36 NFSEFSKKCSERWKTMSAKEKGKFEDM 62
             NFSEFSKKCSERW+TM+AKEKGKFEDM
Sbjct:   107 NFSEFSKKCSERWETMTAKEKGKFEDM 187

 Score = 119 (41.9 bits), Expect = 6.2e-19, Sum P(2) = 6.2e-19
 Identities = 25/33 (75%), Positives = 26/33 (78%), Frame = +1

Query:     1 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDA 33
             GK DPKK RGKMSSYAFF+QT    HKKKH DA
Sbjct:     4 GKKDPKKLRGKMSSYAFFLQTFWV*HKKKHLDA 102

 Score = 41 (14.4 bits), Expect = 2.2e-08, Sum P(2) = 2.2e-08
 Identities = 7/25 (28%), Positives = 12/25 (48%), Frame = +2

Query:   120 SIGDVAKKLGEMWNNTAADDKQPYE 144
             +  + +KK  E W    A +K  +E
Sbjct:   107 NFSEFSKKCSERWETMTAKEKGKFE 181


>X60831 Mouse ubf gene for transcription factor UBF
        Length = 3031

  Plus Strand HSPs:

 Score = 197 (69.3 bits), Expect = 7.9e-14, P = 7.9e-14
 Identities = 54/182 (29%), Positives = 89/182 (48%), Frame = +3

Query:    48 WKTMSAKEKGKFEDMAKADKARYEREMKTYIPPKGETK--KKFKDPNAPKRPP-SAFFLF 104
             W  M  KEK  +   A  D+ RYERE+     P   T   KK K    PK+PP + +  F
Sbjct:  1605 WNNMEKKEKLMWIKKAAEDQKRYERELSEMRAPPAATNSSKKMKFQGEPKKPPMNGYQKF 1784

Query:   105 CSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYE--------- 155
               E      GE   L + +   ++G  W   +   K+ Y+K A + + +Y+         
Sbjct:  1785 SQELLSN--GELNHLPLKERMVEIGSRWQRISQSQKEHYKKLAEEQQRQYKVHLDLWVKS 1958

Query:   156 ---KDIAAYR---AKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEE 209
                +D AAY+   +  + +  K      + S+   + + + E+++DEEEE+DEE+E+EEE
Sbjct:  1959 LSPQDRAAYKEYISNKRKNMTKLRGPNPKSSRTTLQSKSESEEDDDEEEEDDEEEEEEEE 2138

Query:   210 DDDD 213
             DD++
Sbjct:  2139 DDEN 2150

 Score = 163 (57.4 bits), Expect = 6.8e-19, Sum P(2) = 6.8e-19
 Identities = 51/181 (28%), Positives = 92/181 (50%), Frame = +3

Query:     1 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 60
             GKG  +KP+  +S+   F +  R + +++ P+ S   SE ++  +  W  ++ K+K K++
Sbjct:  1248 GKGGSEKPKRPVSAMFIFSEEKRRQLQEERPELSE--SELTRLLARMWNDLTEKKKAKYK 1421

Query:    61 DMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFL-FCSEYRPKIKGEHPGL 119
                 A KA+ ER+      P GE + + K P +PKR    +      +Y  + K +    
Sbjct:  1422 AREAALKAQSERK------PGGEREDRGKLPESPKRAEEIWQQSVIGDYLARFKNDRVK- 1580

Query:   120 SIGDVAKKLGEM-WNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAK-GKPDAAKKGVVKA 177
                  A K  EM WNN    +K  + KKAA+ +++YE++++  RA     +++KK   + 
Sbjct:  1581 -----ALKAMEMTWNNMEKKEKLMWIKKAAEDQKRYERELSEMRAPPAATNSSKKMKFQG 1745

Query:   178 EKSK 181
             E  K
Sbjct:  1746 EPKK 1757

 Score = 140 (49.3 bits), Expect = 9.3e-14, Sum P(2) = 9.3e-14
 Identities = 43/181 (23%), Positives = 89/181 (49%), Frame = +3

Query:     5 PKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAK 64
             PKKP   ++ Y  F    R ++ K HP+ S N  + +K  S+++K +  K+K K+    +
Sbjct:   384 PKKP---LTPYFRFFMEKRAKYAKLHPEMS-NL-DLTKILSKKYKELPEKKKMKYIQDFQ 548

Query:    65 ADKARYEREMKTYI---PPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSI 121
              +K  +ER +  +    P   +  KK   P  PK P   ++    +   K++   P  + 
Sbjct:   549 REKQEFERNLARFREDHPDLIQNAKKSDIPEKPKTPQQLWYTHEKKVYLKVR---PDATT 719

Query:   122 GDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKP-DAAKKGVVKAEKS 180
              +V   LG+ W+  +      +  KA + +++YE+ +  Y  K    + +++G+ K+  +
Sbjct:   720 KEVKDSLGKQWSQLSDKKTLKWIHKALEQRKEYEEIMRDYIQKHPELNISEEGITKSTLT 899

Query:   181 KKKKE 185
             K +++
Sbjct:   900 KAERQ 914

 Score = 139 (48.9 bits), Expect = 1.3e-13, Sum P(2) = 1.3e-13
 Identities = 42/145 (28%), Positives = 67/145 (46%), Frame = +3

Query:    40 FSKKCSERWKTMSAKEKGKFEDMAKADKARYEREMKTY-IPPKGETKKKFKDPNA----- 93
             + KKC ++ K    +     E + + ++ R   E K   I  K  T    K P+      
Sbjct:  1077 YHKKCDQKKKDYEVELLRFLESLPEEEQQRVLGEEKMLNINKKQTTSPASKKPSQEGGKG 1256

Query:    94 ----PKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAK 149
                 PKRP SA F+F  E R +++ E P LS  ++ + L  MWN+     K  Y+ + A 
Sbjct:  1257 GSEKPKRPVSAMFIFSEEKRRQLQEERPELSESELTRLLARMWNDLTEKKKAKYKAREAA 1436

Query:   150 LKEKYEKDIAAYRA-KGK-PDAAKK 172
             LK + E+     R  +GK P++ K+
Sbjct:  1437 LKAQSERKPGGEREDRGKLPESPKR 1511

 Score = 137 (48.2 bits), Expect = 2.6e-13, Sum P(2) = 2.6e-13
 Identities = 48/158 (30%), Positives = 75/158 (47%), Frame = +3

Query:    28 KKHPD-ASVNFSEFS-KKCSERWKTMSAKEKGKFEDMAKADKARYEREMKTYIPPKGETK 85
             + H D   V F +FS   C  +W  +S  E  KF  + +      E     Y   KG  K
Sbjct:   198 ESHMDWEKVAFKDFSGDMCKLKWVEIS-NEVRKFRTLTELILDAQEHVKNPY---KG--K 359

Query:    86 KKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEK 145
             K  K P+ PK+P + +F F  E R K    HP +S  D+ K L + +       K  Y +
Sbjct:   360 KLKKHPDFPKKPLTPYFRFFMEKRAKYAKLHPEMSNLDLTKILSKKYKELPEKKKMKYIQ 539

Query:   146 KAAKLKEKYEKDIAAYRAKGKPDA---AKKGVVKAEKSKKKKE 185
                + K+++E+++A +R +  PD    AKK  +  EK K  ++
Sbjct:   540 DFQREKQEFERNLARFR-EDHPDLIQNAKKSDIP-EKPKTPQQ 662

 Score = 114 (40.1 bits), Expect = 0.0034, P = 0.0034
 Identities = 42/213 (19%), Positives = 93/213 (43%), Frame = +3

Query:     2 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 61
             +G+PKKP   M+ Y  F Q      +  H    +   E   +   RW+ +S  +K  ++ 
Sbjct:  1740 QGEPKKP--PMNGYQKFSQELLSNGELNH----LPLKERMVEIGSRWQRISQSQKEHYKK 1901

Query:    62 MAKADKARYEREMKTYIPPKG-ETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS 120
             +A+  + +Y+  +  ++     + +  +K+  + KR          +   K++G +P  S
Sbjct:  1902 LAEEQQRQYKVHLDLWVKSLSPQDRAAYKEYISNKR----------KNMTKLRGPNPKSS 2051

Query:   121 IGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKS 180
                +  K     + +  DD +  E    + +E+ + +       G   +      ++E  
Sbjct:  2052 RTTLQSK-----SESEEDDDEEEEDDEEEEEEEEDDENGDSSEDGGDSSESSSEDESEDG 2216

Query:   181 KKKKEEEEDEEDEEDEEEEEDEEDEDEEED-----DDDE 214
              +  ++++DE+DE+D++E+ED E E          D  +
Sbjct:  2217 DENDDDDDDEDDEDDDDEDEDNESEGSSSSSSSSGDSSD 2333

 Score = 109 (38.4 bits), Expect = 6.8e-19, Sum P(2) = 6.8e-19
 Identities = 20/36 (55%), Positives = 29/36 (80%), Frame = +3

Query:   179 KSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             +SK + EE++DEE+E+DEEEEE+EED DE  D  ++
Sbjct:  2064 QSKSESEEDDDEEEEDDEEEEEEEED-DENGDSSED 2168

 Score = 108 (38.0 bits), Expect = 0.017, P = 0.017
 Identities = 23/82 (28%), Positives = 46/82 (56%), Frame = +3

Query:   133 NNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEED 192
             + T    K   E+   + +E  E++          D+++ G   +E S + + E+ DE D
Sbjct:  2049 SRTTLQSKSESEEDDDEEEEDDEEEEEEEEDDENGDSSEDGGDSSESSSEDESEDGDEND 2228

Query:   193 EEDEEEEEDEEDEDEEEDDDDE 214
             ++D++E+ DE+D+DE+ED++ E
Sbjct:  2229 DDDDDED-DEDDDDEDEDNESE 2291

 Score = 107 (37.7 bits), Expect = 0.022, P = 0.021
 Identities = 29/99 (29%), Positives = 54/99 (54%), Frame = +3

Query:   124 VAKKLGEMWNNTAADDKQPYEKKAAK-LKEKYEKDIAAYRA----KGKPDAAKKGV-VKA 177
             +++   E +   A + ++ Y+      +K    +D AAY+     K K     +G   K+
Sbjct:  1869 ISQSQKEHYKKLAEEQQRQYKVHLDLWVKSLSPQDRAAYKEYISNKRKNMTKLRGPNPKS 2048

Query:   178 EKS--KKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
              ++  + K E EED+++EE+++EEE+EE+ED+E  D  E
Sbjct:  2049 SRTTLQSKSESEEDDDEEEEDDEEEEEEEEDDENGDSSE 2165

 Score = 96 (33.8 bits), Expect = 2.6e-08, Sum P(2) = 2.6e-08
 Identities = 45/207 (21%), Positives = 94/207 (45%), Frame = +3

Query:     2 KGD-PKKPRGKMSSYAFFVQTCREEHKKKHPDASVN---------FSEFSKKCSERWKTM 51
             K D P+KP  K     ++    ++ + K  PDA+           +S+ S K + +W   
Sbjct:   624 KSDIPEKP--KTPQQLWYTHE-KKVYLKVRPDATTKEVKDSLGKQWSQLSDKKTLKWIHK 794

Query:    52 SAKEKGKFEDMAKADKARYEREMK---------TYIPPKGETKKKFKDPNAPKRPPSAFF 102
             + +++ ++E++ + D  +   E+          T    + + K KF D    K PP+++ 
Sbjct:   795 ALEQRKEYEEIMR-DYIQKHPELNISEEGITKSTLTKAERQLKDKF-DGRPTKPPPNSYS 968

Query:   103 LFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYR 162
             L+C+E    +K + P     +      + W   +  +K  Y KK  + K+ YE ++  + 
Sbjct:   969 LYCAELMANMK-DVPST---ERMVLCSQQWKLLSQKEKDAYHKKCDQKKKDYEVELLRF- 1133

Query:   163 AKGKPDAAKKGVVKAEK--SKKKKEEEEDEEDEEDEE 197
              +  P+  ++ V+  EK  +  KK+       +  +E
Sbjct:  1134 LESLPEEEQQRVLGEEKMLNINKKQTTSPASKKPSQE 1244

 Score = 95 (33.4 bits), Expect = 0.51, P = 0.40
 Identities = 37/202 (18%), Positives = 85/202 (42%), Frame = +3

Query:    12 MSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARYE 71
             M+ Y  F Q      +  H    +   E   +   RW+ +S  +K  ++ +A+  + +Y+
Sbjct:  1764 MNGYQKFSQELLSNGELNH----LPLKERMVEIGSRWQRISQSQKEHYKKLAEEQQRQYK 1931

Query:    72 REMKTYIPPKG-ETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGE 130
               +  ++     + +  +K+  + KR          +   K++G +P  S   +  K   
Sbjct:  1932 VHLDLWVKSLSPQDRAAYKEYISNKR----------KNMTKLRGPNPKSSRTTLQSK--- 2072

Query:   131 MWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDE 190
               + +  DD +  E    + +E+ + +       G   +      ++E   +  ++++DE
Sbjct:  2073 --SESEEDDDEEEEDDEEEEEEEEDDENGDSSEDGGDSSESSSEDESEDGDENDDDDDDE 2246

Query:   191 EDEEDEEEEEDEEDEDEEEDDD---D 213
             +DE+D++E+ED E E          D
Sbjct:  2247 DDEDDDDEDEDNESEGSSSSSSSSGD 2324


>X56687 H.sapiens mRNA for autoantigen NOR-90
        Length = 2489

  Plus Strand HSPs:

 Score = 198 (69.7 bits), Expect = 5.7e-14, P = 5.7e-14
 Identities = 57/180 (31%), Positives = 85/180 (47%), Frame = +3

Query:    48 WKTMSAKEKGKFEDMAKADKARYEREMKTYIPPKGETK--KKFKDPNAPKRPP-SAFFLF 104
             W  M  KEK  +   A  D+ RYERE+     P   T   KK K    PK+PP + +  F
Sbjct:  1623 WNNMEKKEKLMWIKKAAEDQKRYERELSEMRAPPAATNSSKKMKFQGEPKKPPMNGYQKF 1802

Query:   105 CSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAK 164
               E      GE   L + +   ++G  W   +   K+ Y+K A + +++Y+  +  +   
Sbjct:  1803 SQELLSN--GELNHLPLKERMVEIGSRWQRISQSQKEHYKKLAEEQQKQYKVHLDLWVKS 1976

Query:   165 GKPD---AAKKGVVKAEKSKKK------KEE----EEDEEDEEDEEEEEDEEDEDEEEDD 211
               P    A K+ +    KS  K      K      +   E EED+EE+ED+EDEDEEE+D
Sbjct:  1977 LSPQDRAAYKEYISNKRKSMTKLRGPNPKSSRTTLQSKSESEEDDEEDEDDEDEDEEEED 2156

Query:   212 DD 213
             D+
Sbjct:  2157 DE 2162

 Score = 168 (59.1 bits), Expect = 1.3e-18, Sum P(2) = 1.3e-18
 Identities = 52/181 (28%), Positives = 93/181 (51%), Frame = +3

Query:     1 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 60
             GKG  +KP+  +S+   F +  R + +++ P+ S   SE ++  +  W  +S K+K K++
Sbjct:  1266 GKGGSEKPKRPVSAMFIFSEEKRRQLQEERPELSE--SELTRLLARMWNDLSEKKKAKYK 1439

Query:    61 DMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFL-FCSEYRPKIKGEHPGL 119
                 A KA+ ER+      P GE +++ K P +PKR    +      +Y  + K +    
Sbjct:  1440 AREAALKAQSERK------PGGEREERGKLPESPKRAEEIWQQSVIGDYLARFKNDRVK- 1598

Query:   120 SIGDVAKKLGEM-WNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAK-GKPDAAKKGVVKA 177
                  A K  EM WNN    +K  + KKAA+ +++YE++++  RA     +++KK   + 
Sbjct:  1599 -----ALKAMEMTWNNMEKKEKLMWIKKAAEDQKRYERELSEMRAPPAATNSSKKMKFQG 1763

Query:   178 EKSK 181
             E  K
Sbjct:  1764 EPKK 1775

 Score = 139 (48.9 bits), Expect = 8.3e-13, Sum P(2) = 8.3e-13
 Identities = 42/145 (28%), Positives = 67/145 (46%), Frame = +3

Query:    40 FSKKCSERWKTMSAKEKGKFEDMAKADKARYEREMKTY-IPPKGETKKKFKDP------- 91
             + KKC ++ K    +     E + + ++ R   E K   I  K  T    K P       
Sbjct:  1095 YHKKCDQKKKDYEVELLRFLESLPEEEQQRVLGEEKMLNINKKQATSPASKKPAQEGGKG 1274

Query:    92 --NAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAK 149
                 PKRP SA F+F  E R +++ E P LS  ++ + L  MWN+ +   K  Y+ + A 
Sbjct:  1275 GSEKPKRPVSAMFIFSEEKRRQLQEERPELSESELTRLLARMWNDLSEKKKAKYKAREAA 1454

Query:   150 LKEKYEKDIAAYRA-KGK-PDAAKK 172
             LK + E+     R  +GK P++ K+
Sbjct:  1455 LKAQSERKPGGEREERGKLPESPKR 1529

 Score = 137 (48.2 bits), Expect = 1.7e-12, Sum P(2) = 1.7e-12
 Identities = 48/158 (30%), Positives = 75/158 (47%), Frame = +3

Query:    28 KKHPD-ASVNFSEFS-KKCSERWKTMSAKEKGKFEDMAKADKARYEREMKTYIPPKGETK 85
             + H D   V F +FS   C  +W  +S  E  KF  + +      E     Y   KG  K
Sbjct:   327 ESHMDWEKVAFKDFSGDMCKLKWVEIS-NEVRKFRTLTELILDAQEHVKNPY---KG--K 488

Query:    86 KKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEK 145
             K  K P+ PK+P + +F F  E R K    HP +S  D+ K L + +       K  Y +
Sbjct:   489 KLKKHPDFPKKPLTPYFRFFMEKRAKYAKLHPEMSNLDLTKILSKKYKELPEKKKMKYIQ 668

Query:   146 KAAKLKEKYEKDIAAYRAKGKPDA---AKKGVVKAEKSKKKKE 185
                + K+++E+++A +R +  PD    AKK  +  EK K  ++
Sbjct:   669 DFQREKQEFERNLARFR-EDHPDLIQNAKKSDIP-EKPKTPQQ 791

 Score = 116 (40.8 bits), Expect = 0.0019, P = 0.0019
 Identities = 42/168 (25%), Positives = 86/168 (51%), Frame = +3

Query:    47 RWKTMSAKEKGKFEDMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCS 106
             RW+ +S  +K  ++ +A+  + +Y+  +  ++        K   P    +  +A+  + S
Sbjct:  1875 RWQRISQSQKEHYKKLAEEQQKQYKVHLDLWV--------KSLSP----QDRAAYKEYIS 2018

Query:   107 EYRP---KIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRA 163
               R    K++G +P  S   +  K     + +  DD++  + +     E+ E D      
Sbjct:  2019 NKRKSMTKLRGPNPKSSRTTLQSK-----SESEEDDEEDEDDEDED--EEEEDD-----E 2162

Query:   164 KGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
              G  D+++ G   +E S +  E E+ +E+EED+E+E+D+ED+DE+ED++ E
Sbjct:  2163 NG--DSSEDGGDSSESSSED-ESEDGDENEEDDEDEDDDEDDDEDEDNESE 2306

 Score = 115 (40.5 bits), Expect = 0.0025, P = 0.0025
 Identities = 44/213 (20%), Positives = 94/213 (44%), Frame = +3

Query:     2 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 61
             +G+PKKP   M+ Y  F Q      +  H    +   E   +   RW+ +S  +K  ++ 
Sbjct:  1758 QGEPKKP--PMNGYQKFSQELLSNGELNH----LPLKERMVEIGSRWQRISQSQKEHYKK 1919

Query:    62 MAKADKARYEREMKTYIPPKG-ETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS 120
             +A+  + +Y+  +  ++     + +  +K+  + KR              K++G +P  S
Sbjct:  1920 LAEEQQKQYKVHLDLWVKSLSPQDRAAYKEYISNKRKSMT----------KLRGPNPKSS 2069

Query:   121 IGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKS 180
                +  K     + +  DD++  E    + +E+ + +       G   +      ++E  
Sbjct:  2070 RTTLQSK-----SESEEDDEED-EDDEDEDEEEEDDENGDSSEDGGDSSESSSEDESEDG 2231

Query:   181 KKKKEEEEDEEDEEDEEEEEDEEDEDEEED-----DDDE 214
              + +E++EDE+D+ED++E+ED E E          D  +
Sbjct:  2232 DENEEDDEDEDDDEDDDEDEDNESEGSSSSSSSSGDSSD 2348

 Score = 113 (39.8 bits), Expect = 0.0042, P = 0.0042
 Identities = 45/211 (21%), Positives = 95/211 (45%), Frame = +3

Query:     2 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 61
             +G+PKKP   M+ Y  F Q      +  H    +   E   +   RW+ +S  +K  ++ 
Sbjct:  1758 QGEPKKP--PMNGYQKFSQELLSNGELNH----LPLKERMVEIGSRWQRISQSQKEHYKK 1919

Query:    62 MAKADKARYEREMKTYIPPKG-ETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS 120
             +A+  + +Y+  +  ++     + +  +K+  + KR              K++G +P  S
Sbjct:  1920 LAEEQQKQYKVHLDLWVKSLSPQDRAAYKEYISNKRKSMT----------KLRGPNPKSS 2069

Query:   121 IGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKS 180
                +  K     + +  DD++  E    + +E+ + +       G   +      ++E  
Sbjct:  2070 RTTLQSK-----SESEEDDEED-EDDEDEDEEEEDDENGDSSEDGGDSSESSSEDESEDG 2231

Query:   181 KKKKEEEEDEEDEEDEEEEEDEEDED---------EEEDDD 212
              + +E++EDE+D+ED++E+ED E E          +  D D
Sbjct:  2232 DENEEDDEDEDDDEDDDEDEDNESEGSSSSSSSSGDSSDSD 2354

 Score = 113 (39.8 bits), Expect = 0.0042, P = 0.0042
 Identities = 44/213 (20%), Positives = 95/213 (44%), Frame = +3

Query:     2 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 61
             +G+PKKP   M+ Y  F Q      +  H    +   E   +   RW+ +S  +K  ++ 
Sbjct:  1758 QGEPKKP--PMNGYQKFSQELLSNGELNH----LPLKERMVEIGSRWQRISQSQKEHYKK 1919

Query:    62 MAKADKARYEREMKTYIPPKG-ETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS 120
             +A+  + +Y+  +  ++     + +  +K+  + KR              K++G +P  S
Sbjct:  1920 LAEEQQKQYKVHLDLWVKSLSPQDRAAYKEYISNKRKSMT----------KLRGPNPKSS 2069

Query:   121 IGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKS 180
                +  K     + +  DD++  E    + +E+ + +       G   +      ++E  
Sbjct:  2070 RTTLQSK-----SESEEDDEED-EDDEDEDEEEEDDENGDSSEDGGDSSESSSEDESEDG 2231

Query:   181 KKKKEEEEDEEDEEDEEEEEDEEDEDEE-------EDDDDE 214
              + +E++EDE+D+ED++E+ED E E          +  D +
Sbjct:  2232 DENEEDDEDEDDDEDDDEDEDNESEGSSSSSSSSGDSSDSD 2354

 Score = 107 (37.7 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
 Identities = 38/151 (25%), Positives = 70/151 (46%), Frame = +3

Query:     5 PKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAK 64
             PKKP   ++ Y  F    R ++ K HP+ S N  + +K  S+++K +  K+K K+    +
Sbjct:   513 PKKP---LTPYFRFFMEKRAKYAKLHPEMS-NL-DLTKILSKKYKELPEKKKMKYIQDFQ 677

Query:    65 ADKARYEREMKTYI---PPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSI 121
              +K  +ER +  +    P   +  KK   P  PK P   ++    +   K++   P   +
Sbjct:   678 REKQEFERNLARFREDHPDLIQNAKKSDIPEKPKTPQQLWYTHEKKVYLKVR---PDEIM 848

Query:   122 GDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYE 155
              D  +K  E+  +     K    K   +LK+K++
Sbjct:   849 RDYIQKHPELNISEEGITKSTLTKAERQLKDKFD 950

 Score = 100 (35.2 bits), Expect = 1.3e-18, Sum P(2) = 1.3e-18
 Identities = 16/38 (42%), Positives = 26/38 (68%), Frame = +3

Query:   177 AEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             +E      E   ++E E+ +E EED+EDED++EDDD++
Sbjct:  2175 SEDGGDSSESSSEDESEDGDENEEDDEDEDDDEDDDED 2288

 Score = 86 (30.3 bits), Expect = 3.7e-17, Sum P(2) = 3.7e-17
 Identities = 14/28 (50%), Positives = 20/28 (71%), Frame = +3

Query:   187 EEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             +  E   EDE E+ DE +ED+E++DDDE
Sbjct:  2190 DSSESSSEDESEDGDENEEDDEDEDDDE 2273

 Score = 86 (30.3 bits), Expect = 2.6e-06, Sum P(2) = 2.6e-06
 Identities = 24/97 (24%), Positives = 46/97 (47%), Frame = +3

Query:    83 ETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQP 142
             + K KF D    K PP+++ L+C+E    +K + P     +      + W   +  +K  
Sbjct:   930 QLKDKF-DGRPTKPPPNSYSLYCAELMANMK-DVPST---ERMVLCSQQWKLLSQKEKDA 1094

Query:   143 YEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEK 179
             Y KK  + K+ YE ++  +  +  P+  ++ V+  EK
Sbjct:  1095 YHKKCDQKKKDYEVELLRF-LESLPEEEQQRVLGEEK 1202

 Score = 71 (25.0 bits), Expect = 0.0038, Sum P(2) = 0.0038
 Identities = 46/201 (22%), Positives = 83/201 (41%), Frame = +3

Query:     3 GDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDM 62
             G P KP    +SY+ +   C E          V  +E    CS++WK +S KEK  +   
Sbjct:   951 GRPTKP--PPNSYSLY---CAELMANMK---DVPSTERMVLCSQQWKLLSQKEKDAYHKK 1106

Query:    63 AKADKARYEREMKTYIP--PKGETKKKFKDPNA----PKRPPSAFFLFCSEYRPKIKGEH 116
                 K  YE E+  ++   P+ E ++   +        K+  S      ++   K   E 
Sbjct:  1107 CDQKKKDYEVELLRFLESLPEEEQQRVLGEEKMLNINKKQATSPASKKPAQEGGKGGSEK 1286

Query:   117 PGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYR-AKGKPDAAKKGVV 175
             P   +  +     E       +  +  E +  +L  +   D++  + AK K   A++  +
Sbjct:  1287 PKRPVSAMFIFSEEKRRQLQEERPELSESELTRLLARMWNDLSEKKKAKYK---AREAAL 1457

Query:   176 KAEKSKKKKEEEEDEEDEEDEEEEEDEE 203
             KA+ S++K   E +E  +  E  +  EE
Sbjct:  1458 KAQ-SERKPGGEREERGKLPESPKRAEE 1538


>X53390 Human mRNA for upstream binding factor (hUBF)
        Length = 3097

  Plus Strand HSPs:

 Score = 198 (69.7 bits), Expect = 6.2e-14, P = 6.2e-14
 Identities = 57/180 (31%), Positives = 85/180 (47%), Frame = +1

Query:    48 WKTMSAKEKGKFEDMAKADKARYEREMKTYIPPKGETK--KKFKDPNAPKRPP-SAFFLF 104
             W  M  KEK  +   A  D+ RYERE+     P   T   KK K    PK+PP + +  F
Sbjct:  1702 WNNMEKKEKLMWIKKAAEDQKRYERELSEMRAPPAATNSSKKMKFQGEPKKPPMNGYQKF 1881

Query:   105 CSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAK 164
               E      GE   L + +   ++G  W   +   K+ Y+K A + +++Y+  +  +   
Sbjct:  1882 SQELLSN--GELNHLPLKERMVEIGSRWQRISQSQKEHYKKLAEEQQKQYKVHLDLWVKS 2055

Query:   165 GKPD---AAKKGVVKAEKSKKK------KEE----EEDEEDEEDEEEEEDEEDEDEEEDD 211
               P    A K+ +    KS  K      K      +   E EED+EE+ED+EDEDEEE+D
Sbjct:  2056 LSPQDRAAYKEYISNKRKSMTKLRGPNPKSSRTTLQSKSESEEDDEEDEDDEDEDEEEED 2235

Query:   212 DD 213
             D+
Sbjct:  2236 DE 2241

 Score = 168 (59.1 bits), Expect = 1.8e-18, Sum P(2) = 1.8e-18
 Identities = 52/181 (28%), Positives = 93/181 (51%), Frame = +1

Query:     1 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 60
             GKG  +KP+  +S+   F +  R + +++ P+ S   SE ++  +  W  +S K+K K++
Sbjct:  1345 GKGGSEKPKRPVSAMFIFSEEKRRQLQEERPELSE--SELTRLLARMWNDLSEKKKAKYK 1518

Query:    61 DMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFL-FCSEYRPKIKGEHPGL 119
                 A KA+ ER+      P GE +++ K P +PKR    +      +Y  + K +    
Sbjct:  1519 AREAALKAQSERK------PGGEREERGKLPESPKRAEEIWQQSVIGDYLARFKNDRVK- 1677

Query:   120 SIGDVAKKLGEM-WNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAK-GKPDAAKKGVVKA 177
                  A K  EM WNN    +K  + KKAA+ +++YE++++  RA     +++KK   + 
Sbjct:  1678 -----ALKAMEMTWNNMEKKEKLMWIKKAAEDQKRYERELSEMRAPPAATNSSKKMKFQG 1842

Query:   178 EKSK 181
             E  K
Sbjct:  1843 EPKK 1854

 Score = 143 (50.3 bits), Expect = 2.8e-13, Sum P(2) = 2.8e-13
 Identities = 43/181 (23%), Positives = 90/181 (49%), Frame = +1

Query:     5 PKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAK 64
             PKKP   ++ Y  F    R ++ K HP+ S N  + +K  S+++K +  K+K K+    +
Sbjct:   481 PKKP---LTPYFRFFMEKRAKYAKLHPEMS-NL-DLTKILSKKYKELPEKKKMKYIQDFQ 645

Query:    65 ADKARYEREMKTYI---PPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSI 121
              +K  +ER +  +    P   +  KK   P  PK P   ++    +   K++   P  + 
Sbjct:   646 REKQEFERNLARFREDHPDLIQNAKKSDIPEKPKTPQQLWYTHEKKVYLKVR---PDATT 816

Query:   122 GDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKP-DAAKKGVVKAEKS 180
              +V   LG+ W+  +   +  +  KA + +++YE+ +  Y  K    + +++G+ K+  +
Sbjct:   817 KEVKDSLGKQWSQLSDKKRLKWIHKALEQRKEYEEIMRDYIQKHPELNISEEGITKSTLT 996

Query:   181 KKKKE 185
             K +++
Sbjct:   997 KAERQ 1011

 Score = 139 (48.9 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12
 Identities = 42/145 (28%), Positives = 67/145 (46%), Frame = +1

Query:    40 FSKKCSERWKTMSAKEKGKFEDMAKADKARYEREMKTY-IPPKGETKKKFKDP------- 91
             + KKC ++ K    +     E + + ++ R   E K   I  K  T    K P       
Sbjct:  1174 YHKKCDQKKKDYEVELLRFLESLPEEEQQRVLGEEKMLNINKKQATSPASKKPAQEGGKG 1353

Query:    92 --NAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAK 149
                 PKRP SA F+F  E R +++ E P LS  ++ + L  MWN+ +   K  Y+ + A 
Sbjct:  1354 GSEKPKRPVSAMFIFSEEKRRQLQEERPELSESELTRLLARMWNDLSEKKKAKYKAREAA 1533

Query:   150 LKEKYEKDIAAYRA-KGK-PDAAKK 172
             LK + E+     R  +GK P++ K+
Sbjct:  1534 LKAQSERKPGGEREERGKLPESPKR 1608

 Score = 137 (48.2 bits), Expect = 2.3e-12, Sum P(2) = 2.3e-12
 Identities = 48/158 (30%), Positives = 75/158 (47%), Frame = +1

Query:    28 KKHPD-ASVNFSEFS-KKCSERWKTMSAKEKGKFEDMAKADKARYEREMKTYIPPKGETK 85
             + H D   V F +FS   C  +W  +S  E  KF  + +      E     Y   KG  K
Sbjct:   295 ESHMDWEKVAFKDFSGDMCKLKWVEIS-NEVRKFRTLTELILDAQEHVKNPY---KG--K 456

Query:    86 KKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEK 145
             K  K P+ PK+P + +F F  E R K    HP +S  D+ K L + +       K  Y +
Sbjct:   457 KLKKHPDFPKKPLTPYFRFFMEKRAKYAKLHPEMSNLDLTKILSKKYKELPEKKKMKYIQ 636

Query:   146 KAAKLKEKYEKDIAAYRAKGKPDA---AKKGVVKAEKSKKKKE 185
                + K+++E+++A +R +  PD    AKK  +  EK K  ++
Sbjct:   637 DFQREKQEFERNLARFR-EDHPDLIQNAKKSDIP-EKPKTPQQ 759

 Score = 116 (40.8 bits), Expect = 0.0020, P = 0.0020
 Identities = 42/168 (25%), Positives = 86/168 (51%), Frame = +1

Query:    47 RWKTMSAKEKGKFEDMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCS 106
             RW+ +S  +K  ++ +A+  + +Y+  +  ++        K   P    +  +A+  + S
Sbjct:  1954 RWQRISQSQKEHYKKLAEEQQKQYKVHLDLWV--------KSLSP----QDRAAYKEYIS 2097

Query:   107 EYRP---KIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRA 163
               R    K++G +P  S   +  K     + +  DD++  + +     E+ E D      
Sbjct:  2098 NKRKSMTKLRGPNPKSSRTTLQSK-----SESEEDDEEDEDDEDED--EEEEDD-----E 2241

Query:   164 KGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
              G  D+++ G   +E S +  E E+ +E+EED+E+E+D+ED+DE+ED++ E
Sbjct:  2242 NG--DSSEDGGDSSESSSED-ESEDGDENEEDDEDEDDDEDDDEDEDNESE 2385

 Score = 115 (40.5 bits), Expect = 0.0026, P = 0.0026
 Identities = 44/213 (20%), Positives = 94/213 (44%), Frame = +1

Query:     2 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 61
             +G+PKKP   M+ Y  F Q      +  H    +   E   +   RW+ +S  +K  ++ 
Sbjct:  1837 QGEPKKP--PMNGYQKFSQELLSNGELNH----LPLKERMVEIGSRWQRISQSQKEHYKK 1998

Query:    62 MAKADKARYEREMKTYIPPKG-ETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS 120
             +A+  + +Y+  +  ++     + +  +K+  + KR              K++G +P  S
Sbjct:  1999 LAEEQQKQYKVHLDLWVKSLSPQDRAAYKEYISNKRKSMT----------KLRGPNPKSS 2148

Query:   121 IGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKS 180
                +  K     + +  DD++  E    + +E+ + +       G   +      ++E  
Sbjct:  2149 RTTLQSK-----SESEEDDEED-EDDEDEDEEEEDDENGDSSEDGGDSSESSSEDESEDG 2310

Query:   181 KKKKEEEEDEEDEEDEEEEEDEEDEDEEED-----DDDE 214
              + +E++EDE+D+ED++E+ED E E          D  +
Sbjct:  2311 DENEEDDEDEDDDEDDDEDEDNESEGSSSSSSSSGDSSD 2427

 Score = 113 (39.8 bits), Expect = 0.0044, P = 0.0044
 Identities = 45/211 (21%), Positives = 95/211 (45%), Frame = +1

Query:     2 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 61
             +G+PKKP   M+ Y  F Q      +  H    +   E   +   RW+ +S  +K  ++ 
Sbjct:  1837 QGEPKKP--PMNGYQKFSQELLSNGELNH----LPLKERMVEIGSRWQRISQSQKEHYKK 1998

Query:    62 MAKADKARYEREMKTYIPPKG-ETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS 120
             +A+  + +Y+  +  ++     + +  +K+  + KR              K++G +P  S
Sbjct:  1999 LAEEQQKQYKVHLDLWVKSLSPQDRAAYKEYISNKRKSMT----------KLRGPNPKSS 2148

Query:   121 IGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKS 180
                +  K     + +  DD++  E    + +E+ + +       G   +      ++E  
Sbjct:  2149 RTTLQSK-----SESEEDDEED-EDDEDEDEEEEDDENGDSSEDGGDSSESSSEDESEDG 2310

Query:   181 KKKKEEEEDEEDEEDEEEEEDEEDED---------EEEDDD 212
              + +E++EDE+D+ED++E+ED E E          +  D D
Sbjct:  2311 DENEEDDEDEDDDEDDDEDEDNESEGSSSSSSSSGDSSDSD 2433

 Score = 113 (39.8 bits), Expect = 0.0044, P = 0.0044
 Identities = 44/213 (20%), Positives = 95/213 (44%), Frame = +1

Query:     2 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 61
             +G+PKKP   M+ Y  F Q      +  H    +   E   +   RW+ +S  +K  ++ 
Sbjct:  1837 QGEPKKP--PMNGYQKFSQELLSNGELNH----LPLKERMVEIGSRWQRISQSQKEHYKK 1998

Query:    62 MAKADKARYEREMKTYIPPKG-ETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS 120
             +A+  + +Y+  +  ++     + +  +K+  + KR              K++G +P  S
Sbjct:  1999 LAEEQQKQYKVHLDLWVKSLSPQDRAAYKEYISNKRKSMT----------KLRGPNPKSS 2148

Query:   121 IGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKS 180
                +  K     + +  DD++  E    + +E+ + +       G   +      ++E  
Sbjct:  2149 RTTLQSK-----SESEEDDEED-EDDEDEDEEEEDDENGDSSEDGGDSSESSSEDESEDG 2310

Query:   181 KKKKEEEEDEEDEEDEEEEEDEEDEDEE-------EDDDDE 214
              + +E++EDE+D+ED++E+ED E E          +  D +
Sbjct:  2311 DENEEDDEDEDDDEDDDEDEDNESEGSSSSSSSSGDSSDSD 2433

 Score = 100 (35.2 bits), Expect = 1.8e-18, Sum P(2) = 1.8e-18
 Identities = 16/38 (42%), Positives = 26/38 (68%), Frame = +1

Query:   177 AEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             +E      E   ++E E+ +E EED+EDED++EDDD++
Sbjct:  2254 SEDGGDSSESSSEDESEDGDENEEDDEDEDDDEDDDED 2367

 Score = 93 (32.7 bits), Expect = 6.6e-07, Sum P(2) = 6.6e-07
 Identities = 42/187 (22%), Positives = 86/187 (45%), Frame = +1

Query:     2 KGD-PKKPRGKMSSYAFFVQTCREEHKKKHPDASVN---------FSEFSKKCSERWKTM 51
             K D P+KP  K     ++    ++ + K  PDA+           +S+ S K   +W   
Sbjct:   721 KSDIPEKP--KTPQQLWYTHE-KKVYLKVRPDATTKEVKDSLGKQWSQLSDKKRLKWIHK 891

Query:    52 SAKEKGKFEDMAKADKARYEREMK---------TYIPPKGETKKKFKDPNAPKRPPSAFF 102
             + +++ ++E++ + D  +   E+          T    + + K KF D    K PP+++ 
Sbjct:   892 ALEQRKEYEEIMR-DYIQKHPELNISEEGITKSTLTKAERQLKDKF-DGRPTKPPPNSYS 1065

Query:   103 LFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYR 162
             L+C+E    +K + P     +      + W   +  +K  Y KK  + K+ YE ++  + 
Sbjct:  1066 LYCAELMANMK-DVPST---ERMVLCSQQWKLLSQKEKDAYHKKCDQKKKDYEVELLRF- 1230

Query:   163 AKGKPDAAKKGVVKAEK 179
              +  P+  ++ V+  EK
Sbjct:  1231 LESLPEEEQQRVLGEEK 1281

 Score = 86 (30.3 bits), Expect = 5.2e-17, Sum P(2) = 5.2e-17
 Identities = 14/28 (50%), Positives = 20/28 (71%), Frame = +1

Query:   187 EEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             +  E   EDE E+ DE +ED+E++DDDE
Sbjct:  2269 DSSESSSEDESEDGDENEEDDEDEDDDE 2352

 Score = 71 (25.0 bits), Expect = 0.0050, Sum P(2) = 0.0050
 Identities = 46/201 (22%), Positives = 83/201 (41%), Frame = +1

Query:     3 GDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDM 62
             G P KP    +SY+ +   C E          V  +E    CS++WK +S KEK  +   
Sbjct:  1030 GRPTKP--PPNSYSLY---CAELMANMK---DVPSTERMVLCSQQWKLLSQKEKDAYHKK 1185

Query:    63 AKADKARYEREMKTYIP--PKGETKKKFKDPNA----PKRPPSAFFLFCSEYRPKIKGEH 116
                 K  YE E+  ++   P+ E ++   +        K+  S      ++   K   E 
Sbjct:  1186 CDQKKKDYEVELLRFLESLPEEEQQRVLGEEKMLNINKKQATSPASKKPAQEGGKGGSEK 1365

Query:   117 PGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYR-AKGKPDAAKKGVV 175
             P   +  +     E       +  +  E +  +L  +   D++  + AK K   A++  +
Sbjct:  1366 PKRPVSAMFIFSEEKRRQLQEERPELSESELTRLLARMWNDLSEKKKAKYK---AREAAL 1536

Query:   176 KAEKSKKKKEEEEDEEDEEDEEEEEDEE 203
             KA+ S++K   E +E  +  E  +  EE
Sbjct:  1537 KAQ-SERKPGGEREERGKLPESPKRAEE 1617


>X53461;X53260 Human mRNA for upstream binding factor (hUBF)
            Length = 3097

  Plus Strand HSPs:

 Score = 198 (69.7 bits), Expect = 6.2e-14, P = 6.2e-14
 Identities = 57/180 (31%), Positives = 85/180 (47%), Frame = +1

Query:    48 WKTMSAKEKGKFEDMAKADKARYEREMKTYIPPKGETK--KKFKDPNAPKRPP-SAFFLF 104
             W  M  KEK  +   A  D+ RYERE+     P   T   KK K    PK+PP + +  F
Sbjct:  1702 WNNMEKKEKLMWIKKAAEDQKRYERELSEMRAPPAATNSSKKMKFQGEPKKPPMNGYQKF 1881

Query:   105 CSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAK 164
               E      GE   L + +   ++G  W   +   K+ Y+K A + +++Y+  +  +   
Sbjct:  1882 SQELLSN--GELNHLPLKERMVEIGSRWQRISQSQKEHYKKLAEEQQKQYKVHLDLWVKS 2055

Query:   165 GKPD---AAKKGVVKAEKSKKK------KEE----EEDEEDEEDEEEEEDEEDEDEEEDD 211
               P    A K+ +    KS  K      K      +   E EED+EE+ED+EDEDEEE+D
Sbjct:  2056 LSPQDRAAYKEYISNKRKSMTKLRGPNPKSSRTTLQSKSESEEDDEEDEDDEDEDEEEED 2235

Query:   212 DD 213
             D+
Sbjct:  2236 DE 2241

 Score = 168 (59.1 bits), Expect = 1.8e-18, Sum P(2) = 1.8e-18
 Identities = 52/181 (28%), Positives = 93/181 (51%), Frame = +1

Query:     1 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 60
             GKG  +KP+  +S+   F +  R + +++ P+ S   SE ++  +  W  +S K+K K++
Sbjct:  1345 GKGGSEKPKRPVSAMFIFSEEKRRQLQEERPELSE--SELTRLLARMWNDLSEKKKAKYK 1518

Query:    61 DMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFL-FCSEYRPKIKGEHPGL 119
                 A KA+ ER+      P GE +++ K P +PKR    +      +Y  + K +    
Sbjct:  1519 AREAALKAQSERK------PGGEREERGKLPESPKRAEEIWQQSVIGDYLARFKNDRVK- 1677

Query:   120 SIGDVAKKLGEM-WNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAK-GKPDAAKKGVVKA 177
                  A K  EM WNN    +K  + KKAA+ +++YE++++  RA     +++KK   + 
Sbjct:  1678 -----ALKAMEMTWNNMEKKEKLMWIKKAAEDQKRYERELSEMRAPPAATNSSKKMKFQG 1842

Query:   178 EKSK 181
             E  K
Sbjct:  1843 EPKK 1854

 Score = 143 (50.3 bits), Expect = 2.8e-13, Sum P(2) = 2.8e-13
 Identities = 43/181 (23%), Positives = 90/181 (49%), Frame = +1

Query:     5 PKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAK 64
             PKKP   ++ Y  F    R ++ K HP+ S N  + +K  S+++K +  K+K K+    +
Sbjct:   481 PKKP---LTPYFRFFMEKRAKYAKLHPEMS-NL-DLTKILSKKYKELPEKKKMKYIQDFQ 645

Query:    65 ADKARYEREMKTYI---PPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSI 121
              +K  +ER +  +    P   +  KK   P  PK P   ++    +   K++   P  + 
Sbjct:   646 REKQEFERNLARFREDHPDLIQNAKKSDIPEKPKTPQQLWYTHEKKVYLKVR---PDATT 816

Query:   122 GDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKP-DAAKKGVVKAEKS 180
              +V   LG+ W+  +   +  +  KA + +++YE+ +  Y  K    + +++G+ K+  +
Sbjct:   817 KEVKDSLGKQWSQLSDKKRLKWIHKALEQRKEYEEIMRDYIQKHPELNISEEGITKSTLT 996

Query:   181 KKKKE 185
             K +++
Sbjct:   997 KAERQ 1011

 Score = 139 (48.9 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12
 Identities = 42/145 (28%), Positives = 67/145 (46%), Frame = +1

Query:    40 FSKKCSERWKTMSAKEKGKFEDMAKADKARYEREMKTY-IPPKGETKKKFKDP------- 91
             + KKC ++ K    +     E + + ++ R   E K   I  K  T    K P       
Sbjct:  1174 YHKKCDQKKKDYEVELLRFLESLPEEEQQRVLGEEKMLNINKKQATSPASKKPAQEGGKG 1353

Query:    92 --NAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAK 149
                 PKRP SA F+F  E R +++ E P LS  ++ + L  MWN+ +   K  Y+ + A 
Sbjct:  1354 GSEKPKRPVSAMFIFSEEKRRQLQEERPELSESELTRLLARMWNDLSEKKKAKYKAREAA 1533

Query:   150 LKEKYEKDIAAYRA-KGK-PDAAKK 172
             LK + E+     R  +GK P++ K+
Sbjct:  1534 LKAQSERKPGGEREERGKLPESPKR 1608

 Score = 137 (48.2 bits), Expect = 2.3e-12, Sum P(2) = 2.3e-12
 Identities = 48/158 (30%), Positives = 75/158 (47%), Frame = +1

Query:    28 KKHPD-ASVNFSEFS-KKCSERWKTMSAKEKGKFEDMAKADKARYEREMKTYIPPKGETK 85
             + H D   V F +FS   C  +W  +S  E  KF  + +      E     Y   KG  K
Sbjct:   295 ESHMDWEKVAFKDFSGDMCKLKWVEIS-NEVRKFRTLTELILDAQEHVKNPY---KG--K 456

Query:    86 KKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEK 145
             K  K P+ PK+P + +F F  E R K    HP +S  D+ K L + +       K  Y +
Sbjct:   457 KLKKHPDFPKKPLTPYFRFFMEKRAKYAKLHPEMSNLDLTKILSKKYKELPEKKKMKYIQ 636

Query:   146 KAAKLKEKYEKDIAAYRAKGKPDA---AKKGVVKAEKSKKKKE 185
                + K+++E+++A +R +  PD    AKK  +  EK K  ++
Sbjct:   637 DFQREKQEFERNLARFR-EDHPDLIQNAKKSDIP-EKPKTPQQ 759

 Score = 116 (40.8 bits), Expect = 0.0020, P = 0.0020
 Identities = 42/168 (25%), Positives = 86/168 (51%), Frame = +1

Query:    47 RWKTMSAKEKGKFEDMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCS 106
             RW+ +S  +K  ++ +A+  + +Y+  +  ++        K   P    +  +A+  + S
Sbjct:  1954 RWQRISQSQKEHYKKLAEEQQKQYKVHLDLWV--------KSLSP----QDRAAYKEYIS 2097

Query:   107 EYRP---KIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRA 163
               R    K++G +P  S   +  K     + +  DD++  + +     E+ E D      
Sbjct:  2098 NKRKSMTKLRGPNPKSSRTTLQSK-----SESEEDDEEDEDDEDED--EEEEDD-----E 2241

Query:   164 KGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
              G  D+++ G   +E S +  E E+ +E+EED+E+E+D+ED+DE+ED++ E
Sbjct:  2242 NG--DSSEDGGDSSESSSED-ESEDGDENEEDDEDEDDDEDDDEDEDNESE 2385

 Score = 115 (40.5 bits), Expect = 0.0026, P = 0.0026
 Identities = 44/213 (20%), Positives = 94/213 (44%), Frame = +1

Query:     2 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 61
             +G+PKKP   M+ Y  F Q      +  H    +   E   +   RW+ +S  +K  ++ 
Sbjct:  1837 QGEPKKP--PMNGYQKFSQELLSNGELNH----LPLKERMVEIGSRWQRISQSQKEHYKK 1998

Query:    62 MAKADKARYEREMKTYIPPKG-ETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS 120
             +A+  + +Y+  +  ++     + +  +K+  + KR              K++G +P  S
Sbjct:  1999 LAEEQQKQYKVHLDLWVKSLSPQDRAAYKEYISNKRKSMT----------KLRGPNPKSS 2148

Query:   121 IGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKS 180
                +  K     + +  DD++  E    + +E+ + +       G   +      ++E  
Sbjct:  2149 RTTLQSK-----SESEEDDEED-EDDEDEDEEEEDDENGDSSEDGGDSSESSSEDESEDG 2310

Query:   181 KKKKEEEEDEEDEEDEEEEEDEEDEDEEED-----DDDE 214
              + +E++EDE+D+ED++E+ED E E          D  +
Sbjct:  2311 DENEEDDEDEDDDEDDDEDEDNESEGSSSSSSSSGDSSD 2427

 Score = 113 (39.8 bits), Expect = 0.0044, P = 0.0044
 Identities = 45/211 (21%), Positives = 95/211 (45%), Frame = +1

Query:     2 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 61
             +G+PKKP   M+ Y  F Q      +  H    +   E   +   RW+ +S  +K  ++ 
Sbjct:  1837 QGEPKKP--PMNGYQKFSQELLSNGELNH----LPLKERMVEIGSRWQRISQSQKEHYKK 1998

Query:    62 MAKADKARYEREMKTYIPPKG-ETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS 120
             +A+  + +Y+  +  ++     + +  +K+  + KR              K++G +P  S
Sbjct:  1999 LAEEQQKQYKVHLDLWVKSLSPQDRAAYKEYISNKRKSMT----------KLRGPNPKSS 2148

Query:   121 IGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKS 180
                +  K     + +  DD++  E    + +E+ + +       G   +      ++E  
Sbjct:  2149 RTTLQSK-----SESEEDDEED-EDDEDEDEEEEDDENGDSSEDGGDSSESSSEDESEDG 2310

Query:   181 KKKKEEEEDEEDEEDEEEEEDEEDED---------EEEDDD 212
              + +E++EDE+D+ED++E+ED E E          +  D D
Sbjct:  2311 DENEEDDEDEDDDEDDDEDEDNESEGSSSSSSSSGDSSDSD 2433

 Score = 113 (39.8 bits), Expect = 0.0044, P = 0.0044
 Identities = 44/213 (20%), Positives = 95/213 (44%), Frame = +1

Query:     2 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 61
             +G+PKKP   M+ Y  F Q      +  H    +   E   +   RW+ +S  +K  ++ 
Sbjct:  1837 QGEPKKP--PMNGYQKFSQELLSNGELNH----LPLKERMVEIGSRWQRISQSQKEHYKK 1998

Query:    62 MAKADKARYEREMKTYIPPKG-ETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS 120
             +A+  + +Y+  +  ++     + +  +K+  + KR              K++G +P  S
Sbjct:  1999 LAEEQQKQYKVHLDLWVKSLSPQDRAAYKEYISNKRKSMT----------KLRGPNPKSS 2148

Query:   121 IGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKS 180
                +  K     + +  DD++  E    + +E+ + +       G   +      ++E  
Sbjct:  2149 RTTLQSK-----SESEEDDEED-EDDEDEDEEEEDDENGDSSEDGGDSSESSSEDESEDG 2310

Query:   181 KKKKEEEEDEEDEEDEEEEEDEEDEDEE-------EDDDDE 214
              + +E++EDE+D+ED++E+ED E E          +  D +
Sbjct:  2311 DENEEDDEDEDDDEDDDEDEDNESEGSSSSSSSSGDSSDSD 2433

 Score = 100 (35.2 bits), Expect = 1.8e-18, Sum P(2) = 1.8e-18
 Identities = 16/38 (42%), Positives = 26/38 (68%), Frame = +1

Query:   177 AEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             +E      E   ++E E+ +E EED+EDED++EDDD++
Sbjct:  2254 SEDGGDSSESSSEDESEDGDENEEDDEDEDDDEDDDED 2367

 Score = 93 (32.7 bits), Expect = 6.6e-07, Sum P(2) = 6.6e-07
 Identities = 42/187 (22%), Positives = 86/187 (45%), Frame = +1

Query:     2 KGD-PKKPRGKMSSYAFFVQTCREEHKKKHPDASVN---------FSEFSKKCSERWKTM 51
             K D P+KP  K     ++    ++ + K  PDA+           +S+ S K   +W   
Sbjct:   721 KSDIPEKP--KTPQQLWYTHE-KKVYLKVRPDATTKEVKDSLGKQWSQLSDKKRLKWIHK 891

Query:    52 SAKEKGKFEDMAKADKARYEREMK---------TYIPPKGETKKKFKDPNAPKRPPSAFF 102
             + +++ ++E++ + D  +   E+          T    + + K KF D    K PP+++ 
Sbjct:   892 ALEQRKEYEEIMR-DYIQKHPELNISEEGITKSTLTKAERQLKDKF-DGRPTKPPPNSYS 1065

Query:   103 LFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYR 162
             L+C+E    +K + P     +      + W   +  +K  Y KK  + K+ YE ++  + 
Sbjct:  1066 LYCAELMANMK-DVPST---ERMVLCSQQWKLLSQKEKDAYHKKCDQKKKDYEVELLRF- 1230

Query:   163 AKGKPDAAKKGVVKAEK 179
              +  P+  ++ V+  EK
Sbjct:  1231 LESLPEEEQQRVLGEEK 1281

 Score = 86 (30.3 bits), Expect = 5.2e-17, Sum P(2) = 5.2e-17
 Identities = 14/28 (50%), Positives = 20/28 (71%), Frame = +1

Query:   187 EEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             +  E   EDE E+ DE +ED+E++DDDE
Sbjct:  2269 DSSESSSEDESEDGDENEEDDEDEDDDE 2352

 Score = 71 (25.0 bits), Expect = 0.0050, Sum P(2) = 0.0050
 Identities = 46/201 (22%), Positives = 83/201 (41%), Frame = +1

Query:     3 GDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDM 62
             G P KP    +SY+ +   C E          V  +E    CS++WK +S KEK  +   
Sbjct:  1030 GRPTKP--PPNSYSLY---CAELMANMK---DVPSTERMVLCSQQWKLLSQKEKDAYHKK 1185

Query:    63 AKADKARYEREMKTYIP--PKGETKKKFKDPNA----PKRPPSAFFLFCSEYRPKIKGEH 116
                 K  YE E+  ++   P+ E ++   +        K+  S      ++   K   E 
Sbjct:  1186 CDQKKKDYEVELLRFLESLPEEEQQRVLGEEKMLNINKKQATSPASKKPAQEGGKGGSEK 1365

Query:   117 PGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYR-AKGKPDAAKKGVV 175
             P   +  +     E       +  +  E +  +L  +   D++  + AK K   A++  +
Sbjct:  1366 PKRPVSAMFIFSEEKRRQLQEERPELSESELTRLLARMWNDLSEKKKAKYK---AREAAL 1536

Query:   176 KAEKSKKKKEEEEDEEDEEDEEEEEDEE 203
             KA+ S++K   E +E  +  E  +  EE
Sbjct:  1537 KAQ-SERKPGGEREERGKLPESPKRAEE 1617


>U84139 Bos taurus structure-specific recognition protein 1 (SSRP1) mRNA,
        Length = 1834

  Plus Strand HSPs:

 Score = 238 (83.8 bits), Expect = 2.3e-18, P = 2.3e-18
 Identities = 56/162 (34%), Positives = 91/162 (56%), Frame = +1

Query:    32 DASVNFSEFSKKCSERWKT-MSAKEKGKFEDMAKADKARYE-REMKTYIPPKGETK---- 85
             D S N  E  +  +E + +  SA    K  D  + +K R + ++ K     K   K    
Sbjct:   688 DESFNPGEEEEDVAEEFDSNASASSSSKEGDSDREEKKRKQLKKAKMAKDRKSRKKPLEV 867

Query:    86 KKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEK 145
             KK KDPNAPKRP SA+ L+ +  R KIK +HPG+S+ D++KK GE+W   + + K+ +++
Sbjct:   868 KKGKDPNAPKRPMSAYMLWLNASREKIKSDHPGISVTDLSKKAGEIWKGMSKEKKEEWDR 1047

Query:   146 KAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEE 188
             KA   + +YEK +  Y   G+ +++K+   K +K  K K E++
Sbjct:  1048 KAEDARREYEKAMKEYEG-GRGESSKRDKSKKKKKVKVKMEKK 1173

 Score = 221 (77.8 bits), Expect = 1.6e-16, P = 1.6e-16
 Identities = 62/192 (32%), Positives = 97/192 (50%), Frame = +1

Query:    28 KKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARYEREMKTYIPPKGETKKK 87
             ++  D +  F   +   S   +  S +E+ K + + KA  A+  +  K  +    E KK 
Sbjct:   709 EEEEDVAEEFDSNASASSSSKEGDSDREEKKRKQLKKAKMAKDRKSRKKPL----EVKKG 876

Query:    88 FKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKA 147
              KDPNAPKRP SA+ L+ +  R KIK +HPG+S+ D++KK GE+W   + + K+ +++KA
Sbjct:   877 -KDPNAPKRPMSAYMLWLNASREKIKSDHPGISVTDLSKKAGEIWKGMSKEKKEEWDRKA 1053

Query:   148 AKLKEKYEKDIAAYRA-KG---KPDAAKKGV---VKAEK--------SKKKKEEEEDEED 192
                + +YEK +  Y   +G   K D +KK     VK EK        S K    +  E  
Sbjct:  1054 EDARREYEKAMKEYEGGRGESSKRDKSKKKKKVKVKMEKKSTPSRGSSSKSSSRQLSESF 1233

Query:   193 EEDEEEEEDEEDEDEEE 209
             +  E    DE    E +
Sbjct:  1234 KSKEFVSSDESSSGENK 1284

 Score = 155 (54.6 bits), Expect = 1.3e-10, Sum P(2) = 1.3e-10
 Identities = 35/94 (37%), Positives = 53/94 (56%), Frame = +1

Query:     2 KG-DPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 60
             KG DP  P+  MS+Y  ++   RE+ K  HP  SV  ++ SKK  E WK MS ++K +++
Sbjct:   871 KGKDPNAPKRPMSAYMLWLNASREKIKSDHPGISV--TDLSKKAGEIWKGMSKEKKEEWD 1044

Query:    61 DMAKADKARYEREMKTYIPPKGETKKKFKDPNAPK 95
               A+  +  YE+ MK Y   +GE+ K+ K     K
Sbjct:  1045 RKAEDARREYEKAMKEYEGGRGESSKRDKSKKKKK 1149

 Score = 43 (15.1 bits), Expect = 1.3e-10, Sum P(2) = 1.3e-10
 Identities = 9/21 (42%), Positives = 11/21 (52%), Frame = +2

Query:   100 AFFLFCSEYRPKIKGEHPGLS 120
             AF L C+   P+ K  HP  S
Sbjct:  1502 AFPLVCTSLGPQGKASHPAAS 1564


>X58245 Soybean mRNA for HMG-1 like protein
        Length = 761

  Plus Strand HSPs:

 Score = 231 (81.3 bits), Expect = 3.5e-18, P = 3.5e-18
 Identities = 54/133 (40%), Positives = 71/133 (53%), Frame = +1

Query:    80 PKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHP-GLSIGDVAKKLGEMWNNTAAD 138
             P G+ K   KDPN PKRPPSAFF+F  E+R     EHP   ++  V K  G  W   +  
Sbjct:   127 PAGKGKAA-KDPNKPKRPPSAFFVFMEEFRKVFNKEHPENKAVSAVGKAAGAKWKTMSDA 303

Query:   139 DKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEE 198
             +K PY  K+ K K +YEK++ AY  K           +AE      EEE ++   E  +E
Sbjct:   304 EKAPYVAKSEKRKVEYEKNMRAYNKK-----------QAEGPTGGDEEESEKSVSEVNDE 450

Query:   199 EEDEEDEDEEEDDD 212
             ++DEE   EEEDDD
Sbjct:   451 DDDEEGSGEEEDDD 492

 Score = 163 (57.4 bits), Expect = 5.7e-11, P = 5.7e-11
 Identities = 57/172 (33%), Positives = 72/172 (41%), Frame = +1

Query:    41 SKKCSERWKTMSAKEKGKFEDMAKADKARYEREMKTYIPPKGETK-KKFKDPNAPKRPPS 99
             S+ CS     M    K K E      K    ++       K   K K  KDPN PKRPPS
Sbjct:     7 SRPCSPLVSVMKGG-KSKTESKRADPKLAVNKKGAATKARKPAGKGKAAKDPNKPKRPPS 183

Query:   100 AFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIA 159
             AFF+F  E+R     EHP        K +  +     A  K   + + A    K EK   
Sbjct:   184 AFFVFMEEFRKVFNKEHPE------NKAVSAVGKAAGAKWKTMSDAEKAPYVAKSEKRKV 345

Query:   160 AYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDD 212
              Y  K      KK   +AE      EEE ++   E  +E++DEE   EEEDDD
Sbjct:   346 EYE-KNMRAYNKK---QAEGPTGGDEEESEKSVSEVNDEDDDEEGSGEEEDDD 492

 Score = 123 (43.3 bits), Expect = 0.00012, P = 0.00012
 Identities = 28/86 (32%), Positives = 43/86 (50%), Frame = +1

Query:     1 GKG----DPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEK 56
             GKG    DP KP+   S++  F++  R+   K+HP+     S   K    +WKTMS  EK
Sbjct:   133 GKGKAAKDPNKPKRPPSAFFVFMEEFRKVFNKEHPENKA-VSAVGKAAGAKWKTMSDAEK 309

Query:    57 GKFEDMAKADKARYEREMKTYIPPKGE 83
               +   ++  K  YE+ M+ Y   + E
Sbjct:   310 APYVAKSEKRKVEYEKNMRAYNKKQAE 390


>X80460 M.musculus HMG1-R-135 gene
        Length = 190

  Plus Strand HSPs:

 Score = 137 (48.2 bits), Expect = 4.3e-18, Sum P(2) = 4.3e-18
 Identities = 28/37 (75%), Positives = 29/37 (78%), Frame = +1

Query:     1 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNF 37
             GK DPKK RGKMSSYAFF+QT    HKKKHPDAS  F
Sbjct:     4 GKKDPKKLRGKMSSYAFFLQTFWV*HKKKHPDASSTF 114

 Score = 113 (39.8 bits), Expect = 4.3e-18, Sum P(2) = 4.3e-18
 Identities = 22/28 (78%), Positives = 25/28 (89%), Frame = +2

Query:    35 VNFSEFSKKCSERWKTMSAKEKGKFEDM 62
             +  SEFSKKCSER +TM+AKEKGKFEDM
Sbjct:   104 LQLSEFSKKCSER*ETMTAKEKGKFEDM 187


>L08815 Chicken CIIDBP (homologous to human SSRP-1 and mouse T160 genes)
        Length = 2092

  Plus Strand HSPs:

 Score = 236 (83.1 bits), Expect = 4.3e-18, P = 4.3e-18
 Identities = 56/167 (33%), Positives = 95/167 (56%), Frame = +3

Query:    32 DASVNFSEFSKKCSERWKTMSAKEKGKFE-DMAKADKARYE---REMKTYIPPKGETK-K 86
             D S N  E     +E + + ++      + D  + +K   +   + +K   P K + + K
Sbjct:  1323 DESFNPGEEDDDVAEEFDSNASSSSSSGDGDSDRGEKKSSQEGPKIVKDRKPRKKQVESK 1502

Query:    87 KFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKK 146
             K KDPN PKRP SA+ L+ +  R KIK +HPG+SI D++KK GE+W   + + K+ +++K
Sbjct:  1503 KGKDPNVPKRPMSAYMLWLNANREKIKSDHPGISITDLSKKAGELWKAMSKEKKEEWDRK 1682

Query:   147 AAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEE 198
             A   K  YEK +  Y    K +++K      E+SKKKK+++E +   + E++
Sbjct:  1683 AEDAKRDYEKAMKEYSVGNKSESSKM-----ERSKKKKKKQEKQMKGKGEKK 1823

 Score = 151 (53.2 bits), Expect = 5.1e-08, P = 5.1e-08
 Identities = 54/169 (31%), Positives = 83/169 (49%), Frame = +3

Query:     2 KG-DPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 60
             KG DP  P+  MS+Y  ++   RE+ K  HP  S+  ++ SKK  E WK MS ++K +++
Sbjct:  1503 KGKDPNVPKRPMSAYMLWLNANREKIKSDHPGISI--TDLSKKAGELWKAMSKEKKEEWD 1676

Query:    61 DMAKADKARYEREMKTY-IPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGL 119
               A+  K  YE+ MK Y +  K E+ K  +     K+          E + K KGE  G 
Sbjct:  1677 RKAEDAKRDYEKAMKEYSVGNKSESSKMERSKKKKKK---------QEKQMKGKGEKKGS 1829

Query:   120 ------SIGDVAKKLGEMWNN---TAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAA 170
                   S    AK + E + +    ++D+    E K    KE  E +  A  A+   D+A
Sbjct:  1830 PSKSSSSTKSSAKTMSESFKSKEFVSSDESSSAESK----KEDSEDERGASPAQSSEDSA 1997


>X71139 D.melanogaster HMG-Z mRNA
        Length = 1127

  Plus Strand HSPs:

 Score = 230 (81.0 bits), Expect = 5.8e-18, P = 5.8e-18
 Identities = 59/173 (34%), Positives = 93/173 (53%), Frame = +1

Query:    26 HKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARYEREMKTYIPPKGETK 85
             H+++ P +++ +S  S        T  AK   K E  A+      +     YIP +    
Sbjct:    55 HRQQSPVSTIQYSVSSTSI*T---TFRAK---KSEAEAQRQGKLLKCSAFIYIPREKLN* 216

Query:    86 KKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEK 145
              +    + PKRP SA+ L+ +E R +IK ++PG  + D+AK+ GE+W      DK  +E+
Sbjct:   217 TRIMSGDRPKRPLSAYMLWLNETREQIKKDNPGSKVTDIAKRGGELWRGLK--DKTEWEQ 390

Query:   146 KAAKLKEKYEKDIAAYRAKGKPDAA---KKGVVKAEKSKKKKEEEEDEEDEEDEEE 198
             KA K+KE+Y K +  Y A G  D+    K+    A+ +KK K++E  EE+EEDE E
Sbjct:   391 KAIKMKEEYNKAVKEYEANGGTDSGAPKKRKKAAAKPAKKAKKKESSEEEEEDESE 558

 Score = 217 (76.4 bits), Expect = 1.7e-16, P = 1.7e-16
 Identities = 58/182 (31%), Positives = 93/182 (51%), Frame = +1

Query:    26 HKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARYEREMKTYIPPKGETK 85
             H+++ P +++ +S  S        T  AK   K E  A+      +     YIP +    
Sbjct:    55 HRQQSPVSTIQYSVSSTSI*T---TFRAK---KSEAEAQRQGKLLKCSAFIYIPREKLN* 216

Query:    86 KKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEK 145
              +    + PKRP SA+ L+ +E R +IK ++PG  + D+AK+ GE+W      DK  +E+
Sbjct:   217 TRIMSGDRPKRPLSAYMLWLNETREQIKKDNPGSKVTDIAKRGGELWRGLK--DKTEWEQ 390

Query:   146 KAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDE 205
             KA K+KE+Y K +  Y A G  D+       A K +KK   +  ++ ++ E  EE+EEDE
Sbjct:   391 KAIKMKEEYNKAVKEYEANGGTDSG------APKKRKKAAAKPAKKAKKKESSEEEEEDE 552

Query:   206 DE 207
              E
Sbjct:   553 SE 558

 Score = 207 (72.9 bits), Expect = 2.4e-15, P = 2.4e-15
 Identities = 59/184 (32%), Positives = 91/184 (49%), Frame = +1

Query:    26 HKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARYEREMKTYIPPKGETK 85
             H+++ P +++ +S  S        T  AK   K E  A+      +     YIP +    
Sbjct:    55 HRQQSPVSTIQYSVSSTSI*T---TFRAK---KSEAEAQRQGKLLKCSAFIYIPREKLN* 216

Query:    86 KKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEK 145
              +    + PKRP SA+ L+ +E R +IK ++PG  + D+AK+ GE+W      DK  +E+
Sbjct:   217 TRIMSGDRPKRPLSAYMLWLNETREQIKKDNPGSKVTDIAKRGGELWRGLK--DKTEWEQ 390

Query:   146 KAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDE 205
             KA K+KE+Y K +  Y A G  D+   G  K  K    K  ++ ++ E  EEEEEDE   
Sbjct:   391 KAIKMKEEYNKAVKEYEANGGTDS---GAPKKRKKAAAKPAKKAKKKESSEEEEEDES-- 555

Query:   206 DEEE 209
                E
Sbjct:   556 ---E 558

 Score = 196 (69.0 bits), Expect = 4.0e-14, P = 4.0e-14
 Identities = 48/137 (35%), Positives = 74/137 (54%), Frame = +1

Query:    77 YIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTA 136
             YIP +     +    + PKRP SA+ L+ +E R +IK ++PG  + D+AK+ GE+W    
Sbjct:   190 YIPREKLN*TRIMSGDRPKRPLSAYMLWLNETREQIKKDNPGSKVTDIAKRGGELWRGLK 369

Query:   137 ADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDE 196
               DK  +E+KA K+KE+Y K +  Y A G  D+       A K +KK   +  ++ ++ E
Sbjct:   370 --DKTEWEQKAIKMKEEYNKAVKEYEANGGTDSG------APKKRKKAAAKPAKKAKKKE 525

Query:   197 EEEEDEEDEDEEEDDDD 213
               EE+EEDE E      
Sbjct:   526 SSEEEEEDESE------ 558


>L08814 Rat CIIDBP (homologous to human SSRP-1 and mouse T160 genes) mRNA,
        Length = 2082

  Plus Strand HSPs:

 Score = 234 (82.4 bits), Expect = 7.0e-18, P = 7.0e-18
 Identities = 52/161 (32%), Positives = 89/161 (55%), Frame = +1

Query:    28 KKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARYEREMKTYIPPKGETKKK 87
             ++  D +  F   +   S   +  S +E+ K + + +A  A+  +  K     K    KK
Sbjct:  1012 EEEEDVAEEFDSNASASSSSNEGDSDREEKKRKQLKRAKMAKDRKSRK-----KSSEGKK 1176

Query:    88 FKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKA 147
              KDPNAPKRP SA+ L+ +  R KIK +HPG+SI D++KK GE+W   + + K+ +++K 
Sbjct:  1177 GKDPNAPKRPMSAYMLWLNASREKIKSDHPGISITDLSKKAGEIWKGMSKEKKEEWDRKG 1356

Query:   148 AKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEE 188
                + +YE+ +  Y   G+ D++K+   K +K  K K E++
Sbjct:  1357 EDARREYEEAMKEYEG-GRGDSSKRDKSKKKKKVKAKLEKK 1476

 Score = 145 (51.0 bits), Expect = 6.8e-11, Sum P(2) = 6.8e-11
 Identities = 32/94 (34%), Positives = 51/94 (54%), Frame = +1

Query:     2 KG-DPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 60
             KG DP  P+  MS+Y  ++   RE+ K  HP  S+  ++ SKK  E WK MS ++K +++
Sbjct:  1174 KGKDPNAPKRPMSAYMLWLNASREKIKSDHPGISI--TDLSKKAGEIWKGMSKEKKEEWD 1347

Query:    61 DMAKADKARYEREMKTYIPPKGETKKKFKDPNAPK 95
                +  +  YE  MK Y   +G++ K+ K     K
Sbjct:  1348 RKGEDARREYEEAMKEYEGGRGDSSKRDKSKKKKK 1452

 Score = 71 (25.0 bits), Expect = 6.8e-11, Sum P(2) = 6.8e-11
 Identities = 21/70 (30%), Positives = 33/70 (47%), Frame = +1

Query:   140 KQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDE-EDEEE 198
             K+   KK  K+K K EK     R      A+ + +  + KSK+    +E    E + +++
Sbjct:  1423 KRDKSKKKKKVKAKLEKKSTPSRGSSSK-ASSRQLSDSFKSKEFVSSDESSSGENKSKKK 1599

Query:   199 EEDEEDEDEEE 209
                 ED DEEE
Sbjct:  1600 RRRSEDSDEEE 1632

 Score = 59 (20.8 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
 Identities = 19/75 (25%), Positives = 30/75 (40%), Frame = +1

Query:   140 KQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEE 199
             K+   KK  K+K K EK     R      +++      + S   K +E    DE    E 
Sbjct:  1423 KRDKSKKKKKVKAKLEKKSTPSRGSSSKASSR------QLSDSFKSKEFVSSDESSSGEN 1584

Query:   200 EDEEDEDEEEDDDDE 214
             + ++     ED D+E
Sbjct:  1585 KSKKKRRRSEDSDEE 1629


>I66609 Sequence 8 from patent US 5670621.
        Length = 1898

  Plus Strand HSPs:

 Score = 232 (81.7 bits), Expect = 1.1e-17, P = 1.1e-17
 Identities = 53/161 (32%), Positives = 90/161 (55%), Frame = +1

Query:    28 KKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARYEREMKTYIPPKGETKKK 87
             ++  D +  F   +   S   +  S +++ K + + KA  A+  +  K  +    E KK 
Sbjct:  1012 EEEEDVAEEFDSNASASSSSNEGDSDRDEKKRKQLKKAKMAKDRKSRKKPV----EVKKG 1179

Query:    88 FKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKA 147
              KDPNAPKRP SA+ L+ +  R KIK +HPG+SI D++KK GE+W   + + K+ +++KA
Sbjct:  1180 -KDPNAPKRPMSAYMLWLNASREKIKSDHPGISITDLSKKAGEIWKGMSKEKKEEWDRKA 1356

Query:   148 AKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEE 188
                +  YEK +  Y   G+ +++K+   K +K  K K E++
Sbjct:  1357 EDARRDYEKAMKEYEG-GRGESSKRDKSKKKKKVKVKMEKK 1476

 Score = 217 (76.4 bits), Expect = 4.4e-16, P = 4.4e-16
 Identities = 62/192 (32%), Positives = 96/192 (50%), Frame = +1

Query:    28 KKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARYEREMKTYIPPKGETKKK 87
             ++  D +  F   +   S   +  S +++ K + + KA  A+  +  K  +    E KK 
Sbjct:  1012 EEEEDVAEEFDSNASASSSSNEGDSDRDEKKRKQLKKAKMAKDRKSRKKPV----EVKKG 1179

Query:    88 FKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKA 147
              KDPNAPKRP SA+ L+ +  R KIK +HPG+SI D++KK GE+W   + + K+ +++KA
Sbjct:  1180 -KDPNAPKRPMSAYMLWLNASREKIKSDHPGISITDLSKKAGEIWKGMSKEKKEEWDRKA 1356

Query:   148 AKLKEKYEKDIAAYRA-KG---KPDAAKKGV---VKAEK--------SKKKKEEEEDEED 192
                +  YEK +  Y   +G   K D +KK     VK EK        S K    +  E  
Sbjct:  1357 EDARRDYEKAMKEYEGGRGESSKRDKSKKKKKVKVKMEKKSTPSRGSSSKSSSRQLSESF 1536

Query:   193 EEDEEEEEDEEDEDEEE 209
             +  E    DE    E +
Sbjct:  1537 KSKEFVSSDESSSGENK 1587

 Score = 152 (53.5 bits), Expect = 3.0e-08, P = 3.0e-08
 Identities = 34/94 (36%), Positives = 53/94 (56%), Frame = +1

Query:     2 KG-DPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 60
             KG DP  P+  MS+Y  ++   RE+ K  HP  S+  ++ SKK  E WK MS ++K +++
Sbjct:  1174 KGKDPNAPKRPMSAYMLWLNASREKIKSDHPGISI--TDLSKKAGEIWKGMSKEKKEEWD 1347

Query:    61 DMAKADKARYEREMKTYIPPKGETKKKFKDPNAPK 95
               A+  +  YE+ MK Y   +GE+ K+ K     K
Sbjct:  1348 RKAEDARRDYEKAMKEYEGGRGESSKRDKSKKKKK 1452


>Y08297 Z.mays mRNA for HMGc1 protein
        Length = 784

  Plus Strand HSPs:

 Score = 226 (79.6 bits), Expect = 1.2e-17, P = 1.2e-17
 Identities = 59/154 (38%), Positives = 84/154 (54%), Frame = +2

Query:    49 KTMS-AKEKGKFEDMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSE 107
             KT++ A  KGK  D +K D+ R            G+ +KK      PKRPPSAFF+F SE
Sbjct:    68 KTLAPATMKGK-ADTSKKDEGRLRAGGAA-----GK-RKKAAASGKPKRPPSAFFVFMSE 226

Query:   108 YRPKIKGEHPG-LSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGK 166
             +R + +  HPG  S+  V+K  GE W   +  +KQPY  +A + K+ YEK  A +  K +
Sbjct:   227 FRQEYQALHPGNKSVATVSKAAGEKWRAMSDQEKQPYVDQAGQKKQDYEKTKANFDKK-E 403

Query:   167 PDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDE 202
               ++KK   K E     K E +DE+   DEE ++DE
Sbjct:   404 STSSKKA--KTEDEDGSKSEVDDEDGSSDEENDDDE 505

 Score = 214 (75.3 bits), Expect = 2.2e-16, P = 2.2e-16
 Identities = 51/129 (39%), Positives = 71/129 (55%), Frame = +2

Query:    85 KKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPG-LSIGDVAKKLGEMWNNTAADDKQPY 143
             +KK      PKRPPSAFF+F SE+R + +  HPG  S+  V+K  GE W   +  +KQPY
Sbjct:   158 RKKAAASGKPKRPPSAFFVFMSEFRQEYQALHPGNKSVATVSKAAGEKWRAMSDQEKQPY 337

Query:   144 EKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEE 203
               +A + K+ YEK  A +      D       K E +  KK + EDE+  + E ++ED  
Sbjct:   338 VDQAGQKKQDYEKTKANF------D-------KKESTSSKKAKTEDEDGSKSEVDDEDGS 478

Query:   204 DEDEEEDDDD 213
               DEE DDD+
Sbjct:   479 S-DEENDDDE 505

 Score = 214 (75.3 bits), Expect = 2.2e-16, P = 2.2e-16
 Identities = 51/130 (39%), Positives = 72/130 (55%), Frame = +2

Query:    85 KKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPG-LSIGDVAKKLGEMWNNTAADDKQPY 143
             +KK      PKRPPSAFF+F SE+R + +  HPG  S+  V+K  GE W   +  +KQPY
Sbjct:   158 RKKAAASGKPKRPPSAFFVFMSEFRQEYQALHPGNKSVATVSKAAGEKWRAMSDQEKQPY 337

Query:   144 EKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEE 203
               +A + K+ YEK  A +  K           ++  SKK K E+ED      + E +DE+
Sbjct:   338 VDQAGQKKQDYEKTKANFDKK-----------ESTSSKKAKTEDEDGS----KSEVDDED 472

Query:   204 DEDEEEDDDDE 214
                +EE+DDDE
Sbjct:   473 GSSDEENDDDE 505

 Score = 111 (39.1 bits), Expect = 0.0037, P = 0.0037
 Identities = 26/87 (29%), Positives = 44/87 (50%), Frame = +2

Query:     3 GDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDM 62
             G PK+P    S++  F+   R+E++  HP  + + +  SK   E+W+ MS +EK  + D 
Sbjct:   179 GKPKRPP---SAFFVFMSEFRQEYQALHP-GNKSVATVSKAAGEKWRAMSDQEKQPYVDQ 346

Query:    63 AKADKARYEREMKTYIPPKGETKKKFK 89
             A   K  YE+    +   +  + KK K
Sbjct:   347 AGQKKQDYEKTKANFDKKESTSSKKAK 427


>M86737 Human high mobility group box (SSRP1) mRNA, complete cds.
        Length = 2839

  Plus Strand HSPs:

 Score = 232 (81.7 bits), Expect = 1.4e-17, P = 1.4e-17
 Identities = 53/161 (32%), Positives = 90/161 (55%), Frame = +2

Query:    28 KKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARYEREMKTYIPPKGETKKK 87
             ++  D +  F   +   S   +  S +++ K + + KA  A+  +  K  +    E KK 
Sbjct:  1730 EEEEDVAEEFDSNASASSSSNEGDSDRDEKKRKQLKKAKMAKDRKSRKKPV----EVKKG 1897

Query:    88 FKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKA 147
              KDPNAPKRP SA+ L+ +  R KIK +HPG+SI D++KK GE+W   + + K+ +++KA
Sbjct:  1898 -KDPNAPKRPMSAYMLWLNASREKIKSDHPGISITDLSKKAGEIWKGMSKEKKEEWDRKA 2074

Query:   148 AKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEE 188
                +  YEK +  Y   G+ +++K+   K +K  K K E++
Sbjct:  2075 EDARRDYEKAMKEYEG-GRGESSKRDKSKKKKKVKVKMEKK 2194

 Score = 217 (76.4 bits), Expect = 5.6e-16, P = 5.6e-16
 Identities = 62/192 (32%), Positives = 96/192 (50%), Frame = +2

Query:    28 KKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARYEREMKTYIPPKGETKKK 87
             ++  D +  F   +   S   +  S +++ K + + KA  A+  +  K  +    E KK 
Sbjct:  1730 EEEEDVAEEFDSNASASSSSNEGDSDRDEKKRKQLKKAKMAKDRKSRKKPV----EVKKG 1897

Query:    88 FKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKA 147
              KDPNAPKRP SA+ L+ +  R KIK +HPG+SI D++KK GE+W   + + K+ +++KA
Sbjct:  1898 -KDPNAPKRPMSAYMLWLNASREKIKSDHPGISITDLSKKAGEIWKGMSKEKKEEWDRKA 2074

Query:   148 AKLKEKYEKDIAAYRA-KG---KPDAAKKGV---VKAEK--------SKKKKEEEEDEED 192
                +  YEK +  Y   +G   K D +KK     VK EK        S K    +  E  
Sbjct:  2075 EDARRDYEKAMKEYEGGRGESSKRDKSKKKKKVKVKMEKKSTPSRGSSSKSSSRQLSESF 2254

Query:   193 EEDEEEEEDEEDEDEEE 209
             +  E    DE    E +
Sbjct:  2255 KSKEFVSSDESSSGENK 2305

 Score = 152 (53.5 bits), Expect = 3.5e-08, P = 3.5e-08
 Identities = 34/94 (36%), Positives = 53/94 (56%), Frame = +2

Query:     2 KG-DPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 60
             KG DP  P+  MS+Y  ++   RE+ K  HP  S+  ++ SKK  E WK MS ++K +++
Sbjct:  1892 KGKDPNAPKRPMSAYMLWLNASREKIKSDHPGISI--TDLSKKAGEIWKGMSKEKKEEWD 2065

Query:    61 DMAKADKARYEREMKTYIPPKGETKKKFKDPNAPK 95
               A+  +  YE+ MK Y   +GE+ K+ K     K
Sbjct:  2066 RKAEDARRDYEKAMKEYEGGRGESSKRDKSKKKKK 2170


>I66608 Sequence 6 from patent US 5670621.
        Length = 2839

  Plus Strand HSPs:

 Score = 232 (81.7 bits), Expect = 1.4e-17, P = 1.4e-17
 Identities = 53/161 (32%), Positives = 90/161 (55%), Frame = +2

Query:    28 KKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARYEREMKTYIPPKGETKKK 87
             ++  D +  F   +   S   +  S +++ K + + KA  A+  +  K  +    E KK 
Sbjct:  1730 EEEEDVAEEFDSNASASSSSNEGDSDRDEKKRKQLKKAKMAKDRKSRKKPV----EVKKG 1897

Query:    88 FKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKA 147
              KDPNAPKRP SA+ L+ +  R KIK +HPG+SI D++KK GE+W   + + K+ +++KA
Sbjct:  1898 -KDPNAPKRPMSAYMLWLNASREKIKSDHPGISITDLSKKAGEIWKGMSKEKKEEWDRKA 2074

Query:   148 AKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEE 188
                +  YEK +  Y   G+ +++K+   K +K  K K E++
Sbjct:  2075 EDARRDYEKAMKEYEG-GRGESSKRDKSKKKKKVKVKMEKK 2194

 Score = 217 (76.4 bits), Expect = 5.6e-16, P = 5.6e-16
 Identities = 62/192 (32%), Positives = 96/192 (50%), Frame = +2

Query:    28 KKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARYEREMKTYIPPKGETKKK 87
             ++  D +  F   +   S   +  S +++ K + + KA  A+  +  K  +    E KK 
Sbjct:  1730 EEEEDVAEEFDSNASASSSSNEGDSDRDEKKRKQLKKAKMAKDRKSRKKPV----EVKKG 1897

Query:    88 FKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKA 147
              KDPNAPKRP SA+ L+ +  R KIK +HPG+SI D++KK GE+W   + + K+ +++KA
Sbjct:  1898 -KDPNAPKRPMSAYMLWLNASREKIKSDHPGISITDLSKKAGEIWKGMSKEKKEEWDRKA 2074

Query:   148 AKLKEKYEKDIAAYRA-KG---KPDAAKKGV---VKAEK--------SKKKKEEEEDEED 192
                +  YEK +  Y   +G   K D +KK     VK EK        S K    +  E  
Sbjct:  2075 EDARRDYEKAMKEYEGGRGESSKRDKSKKKKKVKVKMEKKSTPSRGSSSKSSSRQLSESF 2254

Query:   193 EEDEEEEEDEEDEDEEE 209
             +  E    DE    E +
Sbjct:  2255 KSKEFVSSDESSSGENK 2305

 Score = 152 (53.5 bits), Expect = 3.5e-08, P = 3.5e-08
 Identities = 34/94 (36%), Positives = 53/94 (56%), Frame = +2

Query:     2 KG-DPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 60
             KG DP  P+  MS+Y  ++   RE+ K  HP  S+  ++ SKK  E WK MS ++K +++
Sbjct:  1892 KGKDPNAPKRPMSAYMLWLNASREKIKSDHPGISI--TDLSKKAGEIWKGMSKEKKEEWD 2065

Query:    61 DMAKADKARYEREMKTYIPPKGETKKKFKDPNAPK 95
               A+  +  YE+ MK Y   +GE+ K+ K     K
Sbjct:  2066 RKAEDARRDYEKAMKEYEGGRGESSKRDKSKKKKK 2170


>Y08807 Z.mays mRNA for HMG protein
        Length = 731

  Plus Strand HSPs:

 Score = 222 (78.1 bits), Expect = 3.3e-17, P = 3.3e-17
 Identities = 47/111 (42%), Positives = 66/111 (59%), Frame = +1

Query:    83 ETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS-IGDVAKKLGEMWNNTAADDKQ 141
             +TK + KDPN PKRPPSAFF+F  E+R   K +HP +  +  + K  G+ W + +  +K 
Sbjct:    91 KTKAE-KDPNKPKRPPSAFFVFMEEFRKDYKEKHPNVKQVSVIGKAGGDKWKSLSDAEKA 267

Query:   142 PYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDE 193
             PY  KA KLK +Y K I AY  K   D    G   ++KSK +  +E++E DE
Sbjct:   268 PYVSKAEKLKAEYTKKIDAYNNKQSGDPTASG--DSDKSKSEVNDEDEEGDE 417

 Score = 121 (42.6 bits), Expect = 0.00019, P = 0.00019
 Identities = 23/74 (31%), Positives = 42/74 (56%), Frame = +1

Query:     4 DPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMA 63
             DP KP+   S++  F++  R+++K+KHP+     S   K   ++WK++S  EK  +   A
Sbjct:   109 DPNKPKRPPSAFFVFMEEFRKDYKEKHPNVK-QVSVIGKAGGDKWKSLSDAEKAPYVSKA 285

Query:    64 KADKARYEREMKTY 77
             +  KA Y +++  Y
Sbjct:   286 EKLKAEYTKKIDAY 327


>Y08298 Z.mays mRNA for HMGc2 protein
        Length = 828

  Plus Strand HSPs:

 Score = 217 (76.4 bits), Expect = 9.9e-17, P = 9.9e-17
 Identities = 55/154 (35%), Positives = 86/154 (55%), Frame = +1

Query:    56 KGKFEDMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGE 115
             KGK  + +K D+AR    ++      G+ +KK      PKRPPSAFF+F SE+R + + +
Sbjct:     4 KGK-ANASKKDEAR----LRAGGGGAGK-RKKAAASGKPKRPPSAFFVFMSEFRQEYQAQ 165

Query:   116 HPG-LSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGV 174
             HPG  S+  V+K  GE W + +  +KQPY  +A + K+ YEK              K  +
Sbjct:   166 HPGNKSVAAVSKAAGEKWRSMSEQEKQPYVDQAGQKKQDYEK-------------TKANI 306

Query:   175 VKAEKSKKKKEEEED-EEDEEDEEEEEDEEDEDEEE 209
              K+  SKK K +++D  + E D+E+   +ED D++E
Sbjct:   307 EKSTSSKKAKTDDDDGSKSEVDDEDGGSDEDNDDDE 414

 Score = 210 (73.9 bits), Expect = 5.5e-16, P = 5.5e-16
 Identities = 47/129 (36%), Positives = 71/129 (55%), Frame = +1

Query:    85 KKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPG-LSIGDVAKKLGEMWNNTAADDKQPY 143
             +KK      PKRPPSAFF+F SE+R + + +HPG  S+  V+K  GE W + +  +KQPY
Sbjct:    73 RKKAAASGKPKRPPSAFFVFMSEFRQEYQAQHPGNKSVAAVSKAAGEKWRSMSEQEKQPY 252

Query:   144 EKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEE 203
               +A + K+ YEK              K  + K+  SKK K    D++D    E ++++ 
Sbjct:   253 VDQAGQKKQDYEK-------------TKANIEKSTSSKKAKT---DDDDGSKSEVDDEDG 384

Query:   204 DEDEEEDDDD 213
               DE+ DDD+
Sbjct:   385 GSDEDNDDDE 414

 Score = 150 (52.8 bits), Expect = 2.7e-08, P = 2.7e-08
 Identities = 42/130 (32%), Positives = 69/130 (53%), Frame = +1

Query:    85 KKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYE 144
             +KK      PKRPPSAFF+F SE+R + + +HPG       K +  +  + AA +K  + 
Sbjct:    73 RKKAAASGKPKRPPSAFFVFMSEFRQEYQAQHPG------NKSVAAV--SKAAGEK--WR 222

Query:   145 KKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEED 204
               + + K+ Y  D A  + K   +  K  + K+  SKK K +++D      + E +DE+ 
Sbjct:   223 SMSEQEKQPYV-DQAGQK-KQDYEKTKANIEKSTSSKKAKTDDDDGS----KSEVDDEDG 384

Query:   205 EDEEEDDDDE 214
               +E++DDDE
Sbjct:   385 GSDEDNDDDE 414

 Score = 114 (40.1 bits), Expect = 0.0017, P = 0.0017
 Identities = 30/93 (32%), Positives = 49/93 (52%), Frame = +1

Query:     3 GDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDM 62
             G PK+P    S++  F+   R+E++ +HP  + + +  SK   E+W++MS +EK  + D 
Sbjct:    94 GKPKRPP---SAFFVFMSEFRQEYQAQHP-GNKSVAAVSKAAGEKWRSMSEQEKQPYVDQ 261

Query:    63 AKADKARYEREMKTYIPPKGETKK-KFKDPNAPK 95
             A   K  YE+  K  I     +KK K  D +  K
Sbjct:   262 AGQKKQDYEKT-KANIEKSTSSKKAKTDDDDGSK 360


>M77023 Drosophila melanogaster high mobility group protein mRNA, complete
        Length = 940

  Plus Strand HSPs:

 Score = 216 (76.0 bits), Expect = 1.1e-16, P = 1.1e-16
 Identities = 48/118 (40%), Positives = 70/118 (59%), Frame = +3

Query:    84 TKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPY 143
             TK      + PKRP SA+ L+ +  R  IK E+PG+ + +VAK+ GE+W   A  DK  +
Sbjct:    81 TKTHSNMSDKPKRPLSAYMLWLNSARESIKRENPGIKVTEVAKRGGELWR--AMKDKSEW 254

Query:   144 EKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVK-----AEKSKKKKEEEEDEEDEEDEEE 198
             E KAAK K+ Y++ +  + A G   AA  G  K     A+K  KK ++EE +ED++DE E
Sbjct:   255 EAKAAKAKDDYDRAVKEFEANGGSSAANGGGAKKRAKPAKKVAKKSKKEESDEDDDDESE 434

 Score = 206 (72.5 bits), Expect = 1.3e-15, P = 1.3e-15
 Identities = 47/126 (37%), Positives = 69/126 (54%), Frame = +3

Query:    84 TKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPY 143
             TK      + PKRP SA+ L+ +  R  IK E+PG+ + +VAK+ GE+W   A  DK  +
Sbjct:    81 TKTHSNMSDKPKRPLSAYMLWLNSARESIKRENPGIKVTEVAKRGGELWR--AMKDKSEW 254

Query:   144 EKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEE 203
             E KAAK K+ Y++ +  + A G   AA  G  K      KK  ++ ++      EE DE+
Sbjct:   255 EAKAAKAKDDYDRAVKEFEANGGSSAANGGGAKKRAKPAKKVAKKSKK------EESDED 416

Query:   204 DEDEEE 209
             D+DE E
Sbjct:   417 DDDESE 434

 Score = 190 (66.9 bits), Expect = 1.0e-13, P = 1.0e-13
 Identities = 45/131 (34%), Positives = 69/131 (52%), Frame = +3

Query:    84 TKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPY 143
             TK      + PKRP SA+ L+ +  R  IK E+PG+ + +VAK+ GE+W   A  DK  +
Sbjct:    81 TKTHSNMSDKPKRPLSAYMLWLNSARESIKRENPGIKVTEVAKRGGELWR--AMKDKSEW 254

Query:   144 EKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEE 203
             E KAAK K+ Y++ +  + A G   AA  G  K      KK  ++ +++E DE++     
Sbjct:   255 EAKAAKAKDDYDRAVKEFEANGGSSAANGGGAKKRAKPAKKVAKKSKKEESDEDD----- 419

Query:   204 DEDEEEDDDDE 214
                   DD+ E
Sbjct:   420 ------DDESE 434

 Score = 101 (35.6 bits), Expect = 0.069, P = 0.067
 Identities = 25/71 (35%), Positives = 45/71 (63%), Frame = +3

Query:     7 KPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKAD 66
             KP+  +S+Y  ++ + RE  K+++P   V  +E +K+  E W+ M  K+K ++E  AKA 
Sbjct:   108 KPKRPLSAYMLWLNSARESIKRENPGIKV--TEVAKRGGELWRAM--KDKSEWE--AKAA 269

Query:    67 KAR--YEREMKTY 77
             KA+  Y+R +K +
Sbjct:   270 KAKDDYDRAVKEF 308


>I66610 Sequence 9 from patent US 5670621.
        Length = 1444

  Plus Strand HSPs:

 Score = 220 (77.4 bits), Expect = 1.5e-16, P = 1.5e-16
 Identities = 52/155 (33%), Positives = 87/155 (56%), Frame = +1

Query:    28 KKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARYEREMKTYIPPKGETKKK 87
             ++  D +  F   +   S   +  S +++ K + + KA  A+  +  K  +    E KK 
Sbjct:  1012 EEEEDVAEEFDSNASASSSSNEGDSDRDEKKRKQLKKAKMAKDRKSRKKPV----EVKKG 1179

Query:    88 FKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKA 147
              KDPNAPKRP SA+ L+ +  R KIK +HPG+SI D++KK GE+W   + + K+ +++KA
Sbjct:  1180 -KDPNAPKRPMSAYMLWLNASREKIKSDHPGISITDLSKKAGEIWKGMSKEKKEEWDRKA 1356

Query:   148 AKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKK 182
                +  YEK +  Y   G+ +++K+     +KSKK
Sbjct:  1357 EDARRDYEKAMKEYEG-GRGESSKR-----DKSKK 1443

 Score = 150 (52.8 bits), Expect = 5.9e-08, P = 5.9e-08
 Identities = 33/88 (37%), Positives = 52/88 (59%), Frame = +1

Query:     2 KG-DPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 60
             KG DP  P+  MS+Y  ++   RE+ K  HP  S+  ++ SKK  E WK MS ++K +++
Sbjct:  1174 KGKDPNAPKRPMSAYMLWLNASREKIKSDHPGISI--TDLSKKAGEIWKGMSKEKKEEWD 1347

Query:    61 DMAKADKARYEREMKTYIPPKGETKKKFK 89
               A+  +  YE+ MK Y   +GE+ K+ K
Sbjct:  1348 RKAEDARRDYEKAMKEYEGGRGESSKRDK 1434


>X71138 D.melanogaster HMG-D mRNA
        Length = 1274

  Plus Strand HSPs:

 Score = 216 (76.0 bits), Expect = 3.2e-16, P = 3.2e-16
 Identities = 48/118 (40%), Positives = 70/118 (59%), Frame = +1

Query:    84 TKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPY 143
             TK      + PKRP SA+ L+ +  R  IK E+PG+ + +VAK+ GE+W   A  DK  +
Sbjct:    76 TKTHSNMSDKPKRPLSAYMLWLNSARESIKRENPGIKVTEVAKRGGELWR--AMKDKSEW 249

Query:   144 EKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVK-----AEKSKKKKEEEEDEEDEEDEEE 198
             E KAAK K+ Y++ +  + A G   AA  G  K     A+K  KK ++EE +ED++DE E
Sbjct:   250 EAKAAKAKDDYDRAVKEFEANGGSSAANGGGAKKRAKPAKKVAKKSKKEESDEDDDDESE 429

 Score = 206 (72.5 bits), Expect = 4.1e-15, P = 4.1e-15
 Identities = 47/126 (37%), Positives = 69/126 (54%), Frame = +1

Query:    84 TKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPY 143
             TK      + PKRP SA+ L+ +  R  IK E+PG+ + +VAK+ GE+W   A  DK  +
Sbjct:    76 TKTHSNMSDKPKRPLSAYMLWLNSARESIKRENPGIKVTEVAKRGGELWR--AMKDKSEW 249

Query:   144 EKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEE 203
             E KAAK K+ Y++ +  + A G   AA  G  K      KK  ++ ++      EE DE+
Sbjct:   250 EAKAAKAKDDYDRAVKEFEANGGSSAANGGGAKKRAKPAKKVAKKSKK------EESDED 411

Query:   204 DEDEEE 209
             D+DE E
Sbjct:   412 DDDESE 429

 Score = 190 (66.9 bits), Expect = 2.3e-13, P = 2.3e-13
 Identities = 45/131 (34%), Positives = 69/131 (52%), Frame = +1

Query:    84 TKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPY 143
             TK      + PKRP SA+ L+ +  R  IK E+PG+ + +VAK+ GE+W   A  DK  +
Sbjct:    76 TKTHSNMSDKPKRPLSAYMLWLNSARESIKRENPGIKVTEVAKRGGELWR--AMKDKSEW 249

Query:   144 EKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEE 203
             E KAAK K+ Y++ +  + A G   AA  G  K      KK  ++ +++E DE++     
Sbjct:   250 EAKAAKAKDDYDRAVKEFEANGGSSAANGGGAKKRAKPAKKVAKKSKKEESDEDD----- 414

Query:   204 DEDEEEDDDDE 214
                   DD+ E
Sbjct:   415 ------DDESE 429

 Score = 101 (35.6 bits), Expect = 0.084, P = 0.080
 Identities = 25/71 (35%), Positives = 45/71 (63%), Frame = +1

Query:     7 KPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKAD 66
             KP+  +S+Y  ++ + RE  K+++P   V  +E +K+  E W+ M  K+K ++E  AKA 
Sbjct:   103 KPKRPLSAYMLWLNSARESIKRENPGIKV--TEVAKRGGELWRAM--KDKSEWE--AKAA 264

Query:    67 KAR--YEREMKTY 77
             KA+  Y+R +K +
Sbjct:   265 KAKDDYDRAVKEF 303


>M93253 Chironomus tentans high mobility group protein 1a (HMG1a) mRNA,
        Length = 1074

  Plus Strand HSPs:

 Score = 211 (74.3 bits), Expect = 6.9e-16, P = 6.9e-16
 Identities = 46/119 (38%), Positives = 70/119 (58%), Frame = +2

Query:    85 KKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYE 144
             ++K K    PKRP SA+ L+ +  R  IK E+P   + ++AKK GE+W      DK  +E
Sbjct:   176 QEKIKMAEKPKRPLSAYMLWLNSARESIKKENPDFKVTEIAKKGGELWRGMK--DKSEWE 349

Query:   145 KKAAKLKEKYEKDIAAYRAKG--KPDAA---KKGVVKAEKSKKKKEEEEDEEDEEDEEEE 199
              KAAK+KE+YEK +  +   G  K   A   K+G    +K   KK +++D ED+E+E+E 
Sbjct:   350 AKAAKMKEEYEKAMKEFERNGGDKSSGASTKKRGKAAEKKKPAKKSKKKDSEDDEEEDES 529

Query:   200 E 200
             +
Sbjct:   530 D 532

 Score = 198 (69.7 bits), Expect = 2.1e-14, P = 2.1e-14
 Identities = 46/129 (35%), Positives = 72/129 (55%), Frame = +2

Query:    85 KKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYE 144
             ++K K    PKRP SA+ L+ +  R  IK E+P   + ++AKK GE+W      DK  +E
Sbjct:   176 QEKIKMAEKPKRPLSAYMLWLNSARESIKKENPDFKVTEIAKKGGELWRGMK--DKSEWE 349

Query:   145 KKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEED 204
              KAAK+KE+YEK +  +   G   ++     K  K+ +KK+  +       + +++D ED
Sbjct:   350 AKAAKMKEEYEKAMKEFERNGGDKSSGASTKKRGKAAEKKKPAK-------KSKKKDSED 508

Query:   205 EDEEEDDDD 213
              DEEED+ D
Sbjct:   509 -DEEEDESD 532

 Score = 189 (66.5 bits), Expect = 2.1e-13, P = 2.1e-13
 Identities = 46/130 (35%), Positives = 72/130 (55%), Frame = +2

Query:    85 KKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYE 144
             ++K K    PKRP SA+ L+ +  R  IK E+P   + ++AKK GE+W      DK  +E
Sbjct:   176 QEKIKMAEKPKRPLSAYMLWLNSARESIKKENPDFKVTEIAKKGGELWRGMK--DKSEWE 349

Query:   145 KKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEED 204
              KAAK+KE+YEK +  +   G   ++     K  K+ +KK+  +       + +++D ED
Sbjct:   350 AKAAKMKEEYEKAMKEFERNGGDKSSGASTKKRGKAAEKKKPAK-------KSKKKDSED 508

Query:   205 EDEEEDDDDE 214
              DEEED+ D 
Sbjct:   509 -DEEEDESD- 532

 Score = 120 (42.2 bits), Expect = 0.00043, P = 0.00043
 Identities = 34/94 (36%), Positives = 55/94 (58%), Frame = +2

Query:     6 KKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKA 65
             +KP+  +S+Y  ++ + RE  KK++PD  V  +E +KK  E W+ M  K+K ++E  A  
Sbjct:   197 EKPKRPLSAYMLWLNSARESIKKENPDFKV--TEIAKKGGELWRGM--KDKSEWEAKAAK 364

Query:    66 DKARYEREMKTYIPPKGE------TKKKFKDPNAPKRPPS 99
              K  YE+ MK +    G+      TKK+ K   A K+ P+
Sbjct:   365 MKEEYEKAMKEFERNGGDKSSGASTKKRGKA--AEKKKPA 478


>M74017 T.brucei rhodesiense HMG1-like protein mRNA, complete cds.
        Length = 2070

  Plus Strand HSPs:

 Score = 214 (75.3 bits), Expect = 9.9e-16, P = 9.9e-16
 Identities = 56/158 (35%), Positives = 85/158 (53%), Frame = +1

Query:     5 PKKP----RGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 60
             PKKP    +  +SSY  FV   REE K K+P   +  +   +   + W   S   K  + 
Sbjct:   472 PKKPADYPKPAVSSYLLFVADQREELKAKNP--GMQNTAILQTLGKMWSDASDDVKEHYR 645

Query:    61 DMAKADKARYEREMKTYIPPKGETK----KKFKDPNAPKRPPSAFFLFCSEYRPKIKGEH 116
               A+ DKAR+ RE+  Y    G+      K  KD NAPKR  ++F  F S++R K    H
Sbjct:   646 KKAEEDKARFRREVDEYKRQGGKEYGRGGKIKKDSNAPKRAMTSFMFFSSDFRSK----H 813

Query:   117 PGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAA 160
               LSI +++K  G  W     ++++ YE+ A K KE+Y++++AA
Sbjct:   814 SDLSIVEMSKAAGAAWKELGPEERKVYEEMAEKDKERYKREMAA 945

 Score = 170 (59.8 bits), Expect = 5.2e-11, P = 5.2e-11
 Identities = 39/146 (26%), Positives = 75/146 (51%), Frame = +1

Query:    39 EFSKKCSERWKTMSAKEKGKFEDMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPP 98
             EF K+     K   A +    +   +A  A  E   KT    K  T+K  K  + PK   
Sbjct:   337 EFKKQLELALKEKDASKSSGGKGSKRARSAGAEAPSKT---KKEMTEKPKKPADYPKPAV 507

Query:    99 SAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDI 158
             S++ LF ++ R ++K ++PG+    + + LG+MW++ + D K+ Y KKA + K ++ +++
Sbjct:   508 SSYLLFVADQREELKAKNPGMQNTAILQTLGKMWSDASDDVKEHYRKKAEEDKARFRREV 687

Query:   159 AAYRAKGKPDAAKKGVVKAEKSKKKK 184
               Y+ +G  +  + G +K + +  K+
Sbjct:   688 DEYKRQGGKEYGRGGKIKKDSNAPKR 765


>X80459 M.musculus HMG1-R-177 gene
        Length = 173

  Plus Strand HSPs:

 Score = 119 (41.9 bits), Expect = 1.1e-15, Sum P(2) = 1.1e-15
 Identities = 25/33 (75%), Positives = 26/33 (78%), Frame = +1

Query:     1 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDA 33
             GK DPKK RGKMSSYAFF+QT    HKKKH DA
Sbjct:     4 GKKDPKKLRGKMSSYAFFLQTFWV*HKKKHLDA 102

 Score = 112 (39.4 bits), Expect = 1.1e-15, Sum P(2) = 1.1e-15
 Identities = 20/22 (90%), Positives = 22/22 (100%), Frame = +2

Query:    36 NFSEFSKKCSERWKTMSAKEKG 57
             NFSEFSKKCSERW+TM+AKEKG
Sbjct:   107 NFSEFSKKCSERWETMTAKEKG 172


>X15317 Yeast NHP6A gene for nonhistone protein
        Length = 591

  Plus Strand HSPs:

 Score = 206 (72.5 bits), Expect = 2.0e-15, P = 2.0e-15
 Identities = 41/90 (45%), Positives = 54/90 (60%), Frame = +1

Query:    74 MKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWN 133
             M T   PK  T +K KDPNAPKR  SA+  F +E R  ++ E+P ++ G V KKLGE W 
Sbjct:    94 MVTPREPKKRTTRKKKDPNAPKRALSAYMFFANENRDIVRSENPDITFGQVGKKLGEKWK 273

Query:   134 NTAADDKQPYEKKAAKLKEKYEKDIAAYRA 163
                 ++KQPYE KA   K++YE +   Y A
Sbjct:   274 ALTPEEKQPYEAKAQADKKRYESEKELYNA 363

 Score = 152 (53.5 bits), Expect = 1.1e-09, P = 1.1e-09
 Identities = 29/76 (38%), Positives = 45/76 (59%), Frame = +1

Query:     2 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 61
             K DP  P+  +S+Y FF    R+  + ++PD  + F +  KK  E+WK ++ +EK  +E 
Sbjct:   136 KKDPNAPKRALSAYMFFANENRDIVRSENPD--ITFGQVGKKLGEKWKALTPEEKQPYEA 309

Query:    62 MAKADKARYEREMKTY 77
              A+ADK RYE E + Y
Sbjct:   310 KAQADKKRYESEKELY 357


>Y14074 Arabidopsis thaliana mRNA for HMG gamma protein
        Length = 701

  Plus Strand HSPs:

 Score = 205 (72.2 bits), Expect = 2.2e-15, P = 2.2e-15
 Identities = 49/139 (35%), Positives = 69/139 (49%), Frame = +1

Query:    63 AKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPG-LSI 121
             +KA     ++ +KT     G  KK  KDPN PKRPPSAFF+F  ++R +    +P   S+
Sbjct:    19 SKAGATSTDQRLKTRGRKAG--KKTKKDPNQPKRPPSAFFVFLEDFRKEFNLANPNNKSV 192

Query:   122 GDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSK 181
               V K  G  W +   +DK PY  KA   K +Y K++  Y  K        G  + E   
Sbjct:   193 ATVGKAAGARWKSMTDEDKAPYVAKAESRKTEYIKNVQQYNLK-----LASGTNREEDDS 357

Query:   182 KKKEEEEDEEDEEDEEEEED 201
              K + E DE   E+E E++D
Sbjct:   358 DKSKSEVDEAVSEEEAEDDD 417

 Score = 94 (33.1 bits), Expect = 0.34, P = 0.29
 Identities = 19/76 (25%), Positives = 41/76 (53%), Frame = +1

Query:     2 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 61
             K DP +P+   S++  F++  R+E    +P+ + + +   K    RWK+M+ ++K  +  
Sbjct:    88 KKDPNQPKRPPSAFFVFLEDFRKEFNLANPN-NKSVATVGKAAGARWKSMTDEDKAPYVA 264

Query:    62 MAKADKARYEREMKTY 77
              A++ K  Y + ++ Y
Sbjct:   265 KAESRKTEYIKNVQQY 312


>X57201 X.laevis xUBFbeta2 mRNA for upstream binding factor 1
        Length = 3729

  Plus Strand HSPs:

 Score = 148 (52.1 bits), Expect = 2.6e-15, Sum P(2) = 2.6e-15
 Identities = 41/184 (22%), Positives = 88/184 (47%), Frame = +2

Query:     2 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 61
             K  P+ P+  ++ Y  F    R ++ K HP+ S N  + +K  S+++K +  K+K K+  
Sbjct:   605 KKHPEFPKKPLTPYFRFFMEKRAKYAKLHPEMS-NL-DLTKILSKKYKELPEKKKMKYIQ 778

Query:    62 MAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSI 121
               + +K  +ER +  +     +  +  K  + P++P +   L+ +  R      H   S 
Sbjct:   779 DFQREKLEFERNLARFREEHPDLMQNPKKSDVPEKPKTPQQLWYNHERKVYLKLHADAST 958

Query:   122 GDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKP-DAAKKGVVKAEKS 180
              DV   LG+ W+      +  +  KA + +++YE  +  Y  K    + A++G+ ++  +
Sbjct:   959 KDVKDALGKQWSQLTDKKRLKWIHKALEQRKQYEGIMREYMQKHPELNIAEEGITRSTLT 1138

Query:   181 KKKKE 185
             K +++
Sbjct:  1139 KAERQ 1153

 Score = 131 (46.1 bits), Expect = 3.3e-05, P = 3.3e-05
 Identities = 40/144 (27%), Positives = 70/144 (48%), Frame = +2

Query:    86 KKFKDPNAPKRPP-SAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYE 144
             KK K    PK+ P + +  F  E      GE   L + +   ++G  W+  +   K  Y+
Sbjct:  1718 KKVKFLGEPKKAPMNGYQKFSQELLSN--GELNHLPLKERMVEIGSRWHRISPSQKDYYK 1891

Query:   145 KKAAKLKEKYE------------KDIAAYRAKG--KPDAAKKGVVKAEKSK--KKKEEEE 188
             K A   +  Y             +D AAY+ +   K  +  K  V   K K   + + ++
Sbjct:  1892 KLAEDQQRVYRTQFDTWMKGLSSQDRAAYKEQNSNKRKSTAKIQVPVAKPKLVAQSKSDD 2071

Query:   189 DEEDEEDEEEEEDEEDEDEEEDDDDE 214
             D+ED++D+E+E+D++DEDE+++D  E
Sbjct:  2072 DDEDDDDDEDEDDDDDEDEDKEDSSE 2149

 Score = 126 (44.4 bits), Expect = 5.5e-12, Sum P(2) = 5.5e-12
 Identities = 44/165 (26%), Positives = 75/165 (45%), Frame = +2

Query:    24 EEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARYEREMKTYIPPKGE 83
             E H   +  A  N+S     C ++W  +S  E  KF  +++      + E     P KG 
Sbjct:   437 ESHLDWNKLAFKNYS--GSMCRQKWMEIS-NEVRKFRTLSELI---LDAEEHVRHPYKG- 595

Query:    84 TKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPY 143
              KK  K P  PK+P + +F F  E R K    HP +S  D+ K L + +       K  Y
Sbjct:   596 -KKLKKHPEFPKKPLTPYFRFFMEKRAKYAKLHPEMSNLDLTKILSKKYKELPEKKKMKY 772

Query:   144 EKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEE 188
              +   + K ++E+++A +R +  PD  +    K++  +K K  ++
Sbjct:   773 IQDFQREKLEFERNLARFREE-HPDLMQNPK-KSDVPEKPKTPQQ 901

 Score = 116 (40.8 bits), Expect = 0.0020, P = 0.0020
 Identities = 48/217 (22%), Positives = 96/217 (44%), Frame = +2

Query:     2 KGD-PKKPRGKMSSYAFFVQTCREEHKKKHPDASVN---------FSEFSKKCSERWKTM 51
             K D P+KP+   +    +    R+ + K H DAS           +S+ + K   +W   
Sbjct:   863 KSDVPEKPK---TPQQLWYNHERKVYLKLHADASTKDVKDALGKQWSQLTDKKRLKWIHK 1033

Query:    52 SAKEKGKFED-----MAKADKARYERE---MKTYIPPKGETKKKFKDPNAPKRPPSAFFL 103
             + +++ ++E      M K  +     E     T    + + K KF D    K PP+++ +
Sbjct:  1034 ALEQRKQYEGIMREYMQKHPELNIAEEGITRSTLTKAERQLKDKF-DGRPTKPPPNSYSM 1210

Query:   104 FCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRA 163
             +C+E    +K + P     +      + W   +  +K  Y KK  + K+ YE ++  +  
Sbjct:  1211 YCAELMANMK-DVPST---ERMVLCSQRWKLLSQKEKDAYNKKCEQRKKDYEVELMRF-L 1375

Query:   164 KGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEE 209
             +  P+  ++ V+  EK  + +  + D++   DE  +  E  +  EE
Sbjct:  1376 ESLPEEEQQRVLAEEKMVRSRSGQADKKKAADERAKLPETPKTAEE 1513

 Score = 113 (39.8 bits), Expect = 2.4e-10, Sum P(2) = 2.4e-10
 Identities = 41/145 (28%), Positives = 69/145 (47%), Frame = +2

Query:    40 FSKKCSERWKTMSAKEKGKFEDMAKADKARYEREMKTYIPPKGET-KKKFKDPNA--PKR 96
             ++KKC +R K    +     E + + ++ R   E K      G+  KKK  D  A  P+ 
Sbjct:  1316 YNKKCEQRKKDYEVELMRFLESLPEEEQQRVLAEEKMVRSRSGQADKKKAADERAKLPET 1495

Query:    97 PPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEM---WNNTAADDKQPYEKKAAKLKEK 153
             P +A  +    ++  + G++      D AK L  M   W N    +K  + KKAA+ +++
Sbjct:  1496 PKTAEEI----WQQSVIGDYLARFKNDRAKALKSMEGTWLNMEKKEKIMWIKKAAEDQKR 1663

Query:   154 YEKDIAAYRAKGKPDAAKKGVVKAEKSKK 182
             YE++++  RA   P  A K V    + KK
Sbjct:  1664 YERELSDMRATPTPTTAGKKVKFLGEPKK 1750

 Score = 112 (39.4 bits), Expect = 2.6e-15, Sum P(2) = 2.6e-15
 Identities = 20/31 (64%), Positives = 24/31 (77%), Frame = +2

Query:   183 KKEEEEDEEDEEDEEEEEDEEDEDEEEDDDD 213
             +   +ED ED E+ E+EE EEDEDEEEDDDD
Sbjct:  2165 ESSSDEDSEDGEENEDEEGEEDEDEEEDDDD 2257

 Score = 101 (35.6 bits), Expect = 3.6e-14, Sum P(2) = 3.6e-14
 Identities = 21/50 (42%), Positives = 32/50 (64%), Frame = +2

Query:   163 AKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDD 212
             AK +   AK  +V   KS    E+++D+EDE+D+++E DE+ ED  ED D
Sbjct:  2012 AKIQVPVAKPKLVAQSKSDDDDEDDDDDEDEDDDDDE-DEDKEDSSEDGD 2158

 Score = 98 (34.5 bits), Expect = 0.24, P = 0.21
 Identities = 25/85 (29%), Positives = 42/85 (49%), Frame = +2

Query:   130 EMW-NNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEE 188
             + W    ++ D+  Y+++ +  K K    I    AK K  A  K     +      +E+E
Sbjct:  1934 DTWMKGLSSQDRAAYKEQNSN-KRKSTAKIQVPVAKPKLVAQSKS--DDDDEDDDDDEDE 2104

Query:   189 DEEDEEDEEEEEDEEDEDEEEDDDDE 214
             D++D+EDE++E+  ED D  E   DE
Sbjct:  2105 DDDDDEDEDKEDSSEDGDSSESSSDE 2182

 Score = 97 (34.1 bits), Expect = 0.31, P = 0.27
 Identities = 44/211 (20%), Positives = 86/211 (40%), Frame = +2

Query:     3 GDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDM 62
             G+PKK    M+ Y  F Q      +  H    +   E   +   RW  +S  +K  ++ +
Sbjct:  1736 GEPKK--APMNGYQKFSQELLSNGELNH----LPLKERMVEIGSRWHRISPSQKDYYKKL 1897

Query:    63 AKADKARYEREMKTYIPP-KGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSI 121
             A+  +  Y  +  T++     + +  +K+ N+ KR  +A  +     +PK+  +    S 
Sbjct:  1898 AEDQQRVYRTQFDTWMKGLSSQDRAAYKEQNSNKRKSTAK-IQVPVAKPKLVAQ----SK 2062

Query:   122 GDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSK 181
              D   +  +   +   DD +  +K      E   +D  +  +    D+ + G    E   
Sbjct:  2063 SDDDDEDDDDDEDEDDDDDEDEDK------EDSSEDGDSSESSSDEDS-EDG---EENED 2212

Query:   182 KKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDD 213
             ++ EE+EDEE+++D+ E           D  D
Sbjct:  2213 EEGEEDEDEEEDDDDNESGSSSSSSSSADSSD 2308

 Score = 93 (32.7 bits), Expect = 0.88, P = 0.59
 Identities = 26/86 (30%), Positives = 44/86 (51%), Frame = +2

Query:   130 EMW-NNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEE 188
             + W    ++ D+  Y+++ +  K K    I    AK K  A  K     +      +E+E
Sbjct:  1934 DTWMKGLSSQDRAAYKEQNSN-KRKSTAKIQVPVAKPKLVAQSKS--DDDDEDDDDDEDE 2104

Query:   189 DEEDEEDEEEEEDEEDEDEEE---DDDDE 214
             D++D+EDE++E+  ED D  E   D+D E
Sbjct:  2105 DDDDDEDEDKEDSSEDGDSSESSSDEDSE 2191

 Score = 84 (29.6 bits), Expect = 9.2, P = 1.0
 Identities = 25/95 (26%), Positives = 47/95 (49%), Frame = +2

Query:   130 EMW-NNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEE 188
             + W    ++ D+  Y+++ +  K K    I    AK K  A  K     E     ++E++
Sbjct:  1934 DTWMKGLSSQDRAAYKEQNSN-KRKSTAKIQVPVAKPKLVAQSKSDDDDEDDDDDEDEDD 2110

Query:   189 DEEDEEDEEEEE----------DEEDEDEEEDDDDE 214
             D++++ED+E+            DE+ ED EE++D+E
Sbjct:  2111 DDDEDEDKEDSSEDGDSSESSSDEDSEDGEENEDEE 2218

 Score = 76 (26.8 bits), Expect = 1.4e-11, Sum P(2) = 1.4e-11
 Identities = 19/61 (31%), Positives = 31/61 (50%), Frame = +2

Query:   166 KPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEED------------DDD 213
             K D+++ G      S +  E+ E+ EDEE EE+E++EED+D+ E              D 
Sbjct:  2132 KEDSSEDGDSSESSSDEDSEDGEENEDEEGEEDEDEEEDDDDNESGSSSSSSSSADSSDS 2311

Query:   214 E 214
             +
Sbjct:  2312 D 2314

 Score = 71 (25.0 bits), Expect = 4.7e-11, Sum P(2) = 4.7e-11
 Identities = 20/63 (31%), Positives = 32/63 (50%), Frame = +2

Query:   166 KPDAAKKG---VVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDE------------DEEED 210
             K D+++ G      +++  +  EE EDEE EEDE+EEED++D             D  + 
Sbjct:  2132 KEDSSEDGDSSESSSDEDSEDGEENEDEEGEEDEDEEEDDDDNESGSSSSSSSSADSSDS 2311

Query:   211 DDD 213
             D +
Sbjct:  2312 DSN 2320


>X97906 V.faba mRNA for transcription factor containing HMG-box
        Length = 2270

  Plus Strand HSPs:

 Score = 209 (73.6 bits), Expect = 3.6e-15, P = 3.6e-15
 Identities = 48/131 (36%), Positives = 75/131 (57%), Frame = +2

Query:    32 DASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARYEREMKTYIPPKGETKKKFKDP 91
             D+  + S+ S+   E  K   AK++ K +  +KA  ++ + +       K + KKK KDP
Sbjct:  1550 DSGADVSDASQSGGETEKP--AKKEPKKDLSSKASSSKKKSKDADVDGVKKKQKKK-KDP 1720

Query:    92 NAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLK 151
             NAPKR  S F  F    R  +K  +PG+S  DV + LGE W N +A++K+PYE KA   K
Sbjct:  1721 NAPKRALSGFMFFSQMERENLKKTNPGISFTDVGRVLGEKWKNLSAEEKEPYEAKAQADK 1900

Query:   152 EKYEKDIAAYR 162
             ++Y+ +I+ Y+
Sbjct:  1901 KRYKDEISGYK 1933

 Score = 153 (53.9 bits), Expect = 2.2e-08, P = 2.2e-08
 Identities = 31/80 (38%), Positives = 48/80 (60%), Frame = +2

Query:     2 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 61
             K DP  P+  +S + FF Q  RE  KK +P   ++F++  +   E+WK +SA+EK  +E 
Sbjct:  1709 KKDPNAPKRALSGFMFFSQMERENLKKTNP--GISFTDVGRVLGEKWKNLSAEEKEPYEA 1882

Query:    62 MAKADKARYEREMKTYIPPK 81
              A+ADK RY+ E+  Y  P+
Sbjct:  1883 KAQADKKRYKDEISGYKNPQ 1942


>M95912 Saccharomyces cerevisiae N-acetyltransferase (MAK) complete cds;
        Length = 1780

  Minus Strand HSPs:

 Score = 206 (72.5 bits), Expect = 6.3e-15, P = 6.3e-15
 Identities = 41/90 (45%), Positives = 54/90 (60%), Frame = -1

Query:    74 MKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWN 133
             M T   PK  T +K KDPNAPKR  SA+  F +E R  ++ E+P ++ G V KKLGE W 
Sbjct:  1420 MVTPREPKKRTTRKKKDPNAPKRALSAYMFFANENRDIVRSENPDITFGQVGKKLGEKWK 1241

Query:   134 NTAADDKQPYEKKAAKLKEKYEKDIAAYRA 163
                 ++KQPYE KA   K++YE +   Y A
Sbjct:  1240 ALTPEEKQPYEAKAQADKKRYESEKELYNA 1151

 Score = 152 (53.5 bits), Expect = 2.9e-08, P = 2.9e-08
 Identities = 29/76 (38%), Positives = 45/76 (59%), Frame = -1

Query:     2 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 61
             K DP  P+  +S+Y FF    R+  + ++PD  + F +  KK  E+WK ++ +EK  +E 
Sbjct:  1378 KKDPNAPKRALSAYMFFANENRDIVRSENPD--ITFGQVGKKLGEKWKALTPEEKQPYEA 1205

Query:    62 MAKADKARYEREMKTY 77
              A+ADK RYE E + Y
Sbjct:  1204 KAQADKKRYESEKELY 1157


>X15318 Yeast NHPB gene for nonhistone protein
        Length = 900

  Plus Strand HSPs:

 Score = 198 (69.7 bits), Expect = 9.4e-15, P = 9.4e-15
 Identities = 39/92 (42%), Positives = 55/92 (59%), Frame = +1

Query:    72 REMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEM 131
             +E K    PK  T ++ KDPNAPKR  SA+  F +E R  ++ E+P ++ G V + LGE 
Sbjct:   343 KEAKQPKEPKKRTTRRKKDPNAPKRGLSAYMFFANENRDIVRSENPDVTFGQVGRILGER 522

Query:   132 WNNTAADDKQPYEKKAAKLKEKYEKDIAAYRA 163
             W    A++KQPYE KA   K++YE +   Y A
Sbjct:   523 WKALTAEEKQPYESKAQADKKRYESEKELYNA 618

 Score = 151 (53.2 bits), Expect = 2.3e-08, P = 2.3e-08
 Identities = 30/76 (39%), Positives = 45/76 (59%), Frame = +1

Query:     2 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 61
             K DP  P+  +S+Y FF    R+  + ++PD  V F +  +   ERWK ++A+EK  +E 
Sbjct:   391 KKDPNAPKRGLSAYMFFANENRDIVRSENPD--VTFGQVGRILGERWKALTAEEKQPYES 564

Query:    62 MAKADKARYEREMKTY 77
              A+ADK RYE E + Y
Sbjct:   565 KAQADKKRYESEKELY 612


>Z49219;U00094 S.cerevisiae chromosome XVI cosmid 9499.
            Length = 43,776

  Plus Strand HSPs:

 Score = 114 (40.1 bits), Expect = 0.0039, P = 0.0039
 Identities = 31/139 (22%), Positives = 68/139 (48%), Frame = +1

Query:    70 YEREMKTYIPPKGETKKKFKDPNA--PK--RPPSAFFLFCSEYRPKIKGEHP--GLSI-- 121
             Y R+   +   K   ++   +P +  PK  RP +AF LF   Y   +  E    G+ I  
Sbjct: 27499 YSRKY*YFFTQKNAVRQSTMNPKSSTPKIPRPKNAFILFRQHYHRILIDEWTAQGVEIPH 27678

Query:   122 -GDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKS 180
               +++K +G  W     +DK  +E  A K K ++E+    Y+ K    + KK ++  E  
Sbjct: 27679 NSNISKIIGTKWKGLQPEDKAHWENLAEKEKLEHERKYPEYKYKPVRKSKKKQLLLKEIE 27858

Query:   181 KKKKEEEEDEEDEEDEEEE 199
             +++++++++++ ++  + +
Sbjct: 27859 QQQQQQQKEQQQQKQSQPQ 27915

 Score = 110 (38.7 bits), Expect = 0.011, P = 0.011
 Identities = 36/139 (25%), Positives = 70/139 (50%), Frame = +1

Query:    70 YEREMKTYIPPKGETKKKFKDPNA--PK--RPPSAFFLFCSEYRPKIKGEHP--GLSI-- 121
             Y R+   +   K   ++   +P +  PK  RP +AF LF   Y   +  E    G+ I  
Sbjct: 27499 YSRKY*YFFTQKNAVRQSTMNPKSSTPKIPRPKNAFILFRQHYHRILIDEWTAQGVEIPH 27678

Query:   122 -GDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKS 180
               +++K +G  W     +DK  +E  A K K ++E+    Y  K KP      V K++K 
Sbjct: 27679 NSNISKIIGTKWKGLQPEDKAHWENLAEKEKLEHERKYPEY--KYKP------VRKSKKK 27834

Query:   181 KKKKEEEEDEEDEEDEEEEEDEEDEDE 207
             +   +E E ++ ++ +E+++ ++ + +
Sbjct: 27835 QLLLKEIEQQQQQQQKEQQQQKQSQPQ 27915

  Minus Strand HSPs:

 Score = 206 (72.5 bits), Expect = 1.2e-14, P = 1.2e-14
 Identities = 41/90 (45%), Positives = 54/90 (60%), Frame = -3

Query:    74 MKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWN 133
             M T   PK  T +K KDPNAPKR  SA+  F +E R  ++ E+P ++ G V KKLGE W 
Sbjct: 13837 MVTPREPKKRTTRKKKDPNAPKRALSAYMFFANENRDIVRSENPDITFGQVGKKLGEKWK 13658

Query:   134 NTAADDKQPYEKKAAKLKEKYEKDIAAYRA 163
                 ++KQPYE KA   K++YE +   Y A
Sbjct: 13657 ALTPEEKQPYEAKAQADKKRYESEKELYNA 13568

 Score = 152 (53.5 bits), Expect = 4.4e-08, P = 4.4e-08
 Identities = 29/76 (38%), Positives = 45/76 (59%), Frame = -3

Query:     2 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 61
             K DP  P+  +S+Y FF    R+  + ++PD  + F +  KK  E+WK ++ +EK  +E 
Sbjct: 13795 KKDPNAPKRALSAYMFFANENRDIVRSENPD--ITFGQVGKKLGEKWKALTPEEKQPYEA 13622

Query:    62 MAKADKARYEREMKTY 77
              A+ADK RYE E + Y
Sbjct: 13621 KAQADKKRYESEKELY 13574


>X59863 X.laevis xUBFalpha1 mRNA for upstream binding factor 2
        Length = 2470

  Plus Strand HSPs:

 Score = 181 (63.7 bits), Expect = 3.7e-12, P = 3.7e-12
 Identities = 55/185 (29%), Positives = 87/185 (47%), Frame = +3

Query:    48 WKTMSAKEKGKFEDMAKADKARYEREMKTY--IPPKGETKKKFKDPNAPKRPP-SAFFLF 104
             W  M  KEK  +   A  D+ RYERE+      P      KK K    PK+ P + +  F
Sbjct:  1566 WLNMEKKEKIMWIKKAAEDQKRYERELSDMRSTPAPTTAGKKVKFLGEPKKAPMNGYQKF 1745

Query:   105 CSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYE--------- 155
               E      GE   L + +   ++G  W+  +   K  Y+K A   +  Y          
Sbjct:  1746 SQELLSN--GELNHLPLKERMAEIGSRWHRISPTQKDYYKKLAEDQQRLYRTQFDTWMKG 1919

Query:   156 ---KDIAAYRAKG--KPDAAKKGVVKAEKSK----KKKEEEEDEEDEEDEEEEEDEEDED 206
                +D AAY+ +   K  +  K    + KSK     K +++ED+ED+EDEE+++D++DED
Sbjct:  1920 LSTQDRAAYKEQNTNKRKSTTKIQAPSSKSKLVIQSKSDDDEDDEDDEDEEDDDDDDDED 2099

Query:   207 EEEDDDD 213
             +E+  +D
Sbjct:  2100 KEDSSED 2120

 Score = 143 (50.3 bits), Expect = 1.8e-14, Sum P(2) = 1.8e-14
 Identities = 40/184 (21%), Positives = 87/184 (47%), Frame = +3

Query:     2 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 61
             K  P+ P+  ++ Y  F    R ++ K HP+ S N  + +K  S+++K +  K+K K+  
Sbjct:   507 KKHPEFPKKPLTPYFRFFMEKRAKYAKLHPEMS-NL-DLTKILSKKYKELPEKKKMKYIQ 680

Query:    62 MAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSI 121
               + +K  +ER M  +     +  +  K  + P++P +   L+ +  R      H   S 
Sbjct:   681 DFQREKQDFERNMAKFREEHPDLMQNPKKSDVPEKPKTPQQLWYNHERKVYLKLHADAST 860

Query:   122 GDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKP-DAAKKGVVKAEKS 180
              D+   LG+ W+      +  +  KA + +++YE  +  Y  K    +  ++G+ ++  +
Sbjct:   861 KDIKDALGKQWSQLPDKKRLKWIHKALEQRKQYEGVMREYMQKHPELNITEEGITRSTLT 1040

Query:   181 KKKKE 185
             K +++
Sbjct:  1041 KAERQ 1055

 Score = 140 (49.3 bits), Expect = 2.2e-06, P = 2.2e-06
 Identities = 48/179 (26%), Positives = 86/179 (48%), Frame = +3

Query:    42 KKCSERWKTMSAKEKGKFEDMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPP-SA 100
             KK    W   +A+++ ++E        R   +M++  P      KK K    PK+ P + 
Sbjct:  1581 KKEKIMWIKKAAEDQKRYE--------RELSDMRS-TPAPTTAGKKVKFLGEPKKAPMNG 1733

Query:   101 FFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYE----- 155
             +  F  E      GE   L + +   ++G  W+  +   K  Y+K A   +  Y      
Sbjct:  1734 YQKFSQELLSN--GELNHLPLKERMAEIGSRWHRISPTQKDYYKKLAEDQQRLYRTQFDT 1907

Query:   156 -------KDIAAYRAKGKPDAAKKGVVKAEKSKKK----KEEEEDEEDEEDEEEEEDEED 204
                    +D AAY+ +          ++A  SK K     + ++DE+DE+DE+EE+D++D
Sbjct:  1908 WMKGLSTQDRAAYKEQNTNKRKSTTKIQAPSSKSKLVIQSKSDDDEDDEDDEDEEDDDDD 2087

Query:   205 EDEEEDDDDE 214
             +DE+++D  E
Sbjct:  2088 DDEDKEDSSE 2117

 Score = 125 (44.0 bits), Expect = 4.5e-08, Sum P(2) = 4.5e-08
 Identities = 42/152 (27%), Positives = 71/152 (46%), Frame = +3

Query:    37 FSEFS-KKCSERWKTMSAKEKGKFEDMAKA--DKARYEREMKTYIPPKGETKKKFKDPNA 93
             F  +S   C ++W  +S  E  KF  + +   D   + R      P KG  KK  K P  
Sbjct:   369 FKHYSGSMCRQKWMEIS-NEVRKFRTLTELILDADEHVRH-----PYKG--KKLKKHPEF 524

Query:    94 PKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEK 153
             PK+P + +F F  E R K    HP +S  D+ K L + +       K  Y +   + K+ 
Sbjct:   525 PKKPLTPYFRFFMEKRAKYAKLHPEMSNLDLTKILSKKYKELPEKKKMKYIQDFQREKQD 704

Query:   154 YEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEE 188
             +E+++A +R +  PD  +    K++  +K K  ++
Sbjct:   705 FERNMAKFREE-HPDLMQNPK-KSDVPEKPKTPQQ 803

 Score = 113 (39.8 bits), Expect = 0.0042, P = 0.0042
 Identities = 30/93 (32%), Positives = 52/93 (55%), Frame = +3

Query:   130 EMWNNTAADDKQPYEKKAAK-LKEKYEKDIAAYRAKG--KPDAAKKGVVKAEKSK----K 182
             + +   A D ++ Y  +    +K    +D AAY+ +   K  +  K    + KSK     
Sbjct:  1848 DYYKKLAEDQQRLYRTQFDTWMKGLSTQDRAAYKEQNTNKRKSTTKIQAPSSKSKLVIQS 2027

Query:   183 KKEEEEDEEDEEDEEEEEDEEDEDEE---EDDD 212
             K +++ED+ED+EDEE+++D++DED+E   ED D
Sbjct:  2028 KSDDDEDDEDDEDEEDDDDDDDEDKEDSSEDGD 2126

 Score = 110 (38.7 bits), Expect = 1.8e-14, Sum P(2) = 1.8e-14
 Identities = 20/48 (41%), Positives = 33/48 (68%), Frame = +3

Query:   166 KPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDD 213
             K D+++ G    + S    +E+ +E +E ++EE+E+E+DED EEDDDD
Sbjct:  2100 KEDSSEDG----DSSDSSSDEDSEEGEENEDEEDEEEDDEDNEEDDDD 2231

 Score = 110 (38.7 bits), Expect = 1.8e-14, Sum P(2) = 1.8e-14
 Identities = 22/49 (44%), Positives = 36/49 (73%), Frame = +3

Query:   166 KPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             K D+++ G   +  S   ++ EE EE+E++E+EEED+ED +EE+DDD+E
Sbjct:  2100 KEDSSEDG--DSSDSSSDEDSEEGEENEDEEDEEEDDED-NEEDDDDNE 2237

 Score = 105 (37.0 bits), Expect = 0.036, P = 0.035
 Identities = 32/101 (31%), Positives = 54/101 (53%), Frame = +3

Query:   130 EMWNNTAADDKQPYEKKAAK-LKEKYEKDIAAYRAKG--KPDAAKKGVVKAEKSK----K 182
             + +   A D ++ Y  +    +K    +D AAY+ +   K  +  K    + KSK     
Sbjct:  1848 DYYKKLAEDQQRLYRTQFDTWMKGLSTQDRAAYKEQNTNKRKSTTKIQAPSSKSKLVIQS 2027

Query:   183 KKEEEEDEEDEEDEEEEEDEEDEDEE---EDDD------DE 214
             K +++ED+ED+EDEE+++D++DED+E   ED D      DE
Sbjct:  2028 KSDDDEDDEDDEDEEDDDDDDDEDKEDSSEDGDSSDSSSDE 2150

 Score = 103 (36.3 bits), Expect = 0.061, P = 0.059
 Identities = 31/108 (28%), Positives = 47/108 (43%), Frame = +3

Query:   108 YRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDK--QPYEKKAAKLKEKYEKDIAAYRAKG 165
             YR +      GLS  D A    +  N   +  K   P  K    ++ K + D      + 
Sbjct:  1887 YRTQFDTWMKGLSTQDRAAYKEQNTNKRKSTTKIQAPSSKSKLVIQSKSDDDEDDEDDED 2066

Query:   166 KPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDD 213
             + D         E S +  +  +   DE+ EE EE+E++EDEEEDD+D
Sbjct:  2067 EEDDDDDDDEDKEDSSEDGDSSDSSSDEDSEEGEENEDEEDEEEDDED 2210

 Score = 93 (32.7 bits), Expect = 0.83, P = 0.56
 Identities = 23/86 (26%), Positives = 41/86 (47%), Frame = +3

Query:   130 EMW-NNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEE 188
             + W    +  D+  Y+++    K K    I A  +K K     K     +    + EE++
Sbjct:  1902 DTWMKGLSTQDRAAYKEQNTN-KRKSTTKIQAPSSKSKLVIQSKSDDDEDDEDDEDEEDD 2078

Query:   189 DEEDEEDEEEE-EDEEDEDEEEDDDDE 214
             D++D+ED+E+  ED +  D   D+D E
Sbjct:  2079 DDDDDEDKEDSSEDGDSSDSSSDEDSE 2159

 Score = 90 (31.7 bits), Expect = 6.2e-08, Sum P(2) = 6.2e-08
 Identities = 42/187 (22%), Positives = 82/187 (43%), Frame = +3

Query:     2 KGD-PKKPRGKMSSYAFFVQTCREEHKKKHPDASVN---------FSEFSKKCSERWKTM 51
             K D P+KP+   +    +    R+ + K H DAS           +S+   K   +W   
Sbjct:   765 KSDVPEKPK---TPQQLWYNHERKVYLKLHADASTKDIKDALGKQWSQLPDKKRLKWIHK 935

Query:    52 SAKEKGKFED-----MAKADKARYERE---MKTYIPPKGETKKKFKDPNAPKRPPSAFFL 103
             + +++ ++E      M K  +     E     T    + + K KF D    K PP+++ +
Sbjct:   936 ALEQRKQYEGVMREYMQKHPELNITEEGITRSTLTKAERQLKDKF-DGRPTKPPPNSYSM 1112

Query:   104 FCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRA 163
             +C+E    +K + P     +      + W   +  +K  Y KK  + K+ YE ++  +  
Sbjct:  1113 YCAELMANMK-DVPST---ERMVLCSQRWKLLSQKEKDAYHKKCEQRKKDYEVELMRF-L 1277

Query:   164 KGKPDAAKKGVVKAEK 179
             +  P+  ++ V+  EK
Sbjct:  1278 ENLPEEEQQRVLAEEK 1325

 Score = 82 (28.9 bits), Expect = 1.5e-11, Sum P(2) = 1.5e-11
 Identities = 23/61 (37%), Positives = 32/61 (52%), Frame = +3

Query:   166 KPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEE--EEDEEDEDEEE-----------DDD 212
             K D+++ G      S +  EE E+ EDEEDEEE  E++EED+D+ E           D  
Sbjct:  2100 KEDSSEDGDSSDSSSDEDSEEGEENEDEEDEEEDDEDNEEDDDDNESGSSSSSSSSADSS 2279

Query:   213 D 213
             D
Sbjct:  2280 D 2282

 Score = 79 (27.8 bits), Expect = 8.3e-07, Sum P(2) = 8.3e-07
 Identities = 42/162 (25%), Positives = 73/162 (45%), Frame = +3

Query:    25 EHKKKHPDASVNFSEFSKKC-SERWKTMSAKEK--GKFEDMAKADKARYEREMKTYIPPK 81
             E +KK  D  V    F +    E  + + A+EK  G          ++   E    +  +
Sbjct:  1233 EQRKK--DYEVELMRFLENLPEEEQQRVLAEEKMVGMKRKRTNTPASKMATEDAAKVKSR 1406

Query:    82 -GET-KKKFKDPNA--PKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEM---WNN 134
              G+  KKK  +  A  P+ P +A  +    ++  + G++      D AK L  M   W N
Sbjct:  1407 SGQADKKKAAEERAKLPETPKTAEEI----WQQSVIGDYLARFKNDRAKALKVMEATWLN 1574

Query:   135 TAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKK 182
                 +K  + KKAA+ +++YE++++  R+   P  A K V    + KK
Sbjct:  1575 MEKKEKIMWIKKAAEDQKRYERELSDMRSTPAPTTAGKKVKFLGEPKK 1718

 Score = 73 (25.7 bits), Expect = 1.3e-10, Sum P(2) = 1.3e-10
 Identities = 12/28 (42%), Positives = 24/28 (85%), Frame = +3

Query:   177 AEKSKKKKEEEEDEEDEEDEEEEEDE-E 203
             +E+ ++ ++EE++EED+ED EE++D+ E
Sbjct:  2154 SEEGEENEDEEDEEEDDEDNEEDDDDNE 2237

 Score = 67 (23.6 bits), Expect = 5.2e-10, Sum P(2) = 5.2e-10
 Identities = 13/47 (27%), Positives = 28/47 (59%), Frame = +3

Query:   177 AEKSKKKKEEEEDEEDEEDEEEEEDEEDE----------DEEEDDDD 213
             +E+ ++ ++EE++EED+ED EE++D+ +           D  + D +
Sbjct:  2154 SEEGEENEDEEDEEEDDEDNEEDDDDNESGSSSSSSSSADSSDSDSN 2294


>U00049 Caenorhabditis elegans cosmid C18F10.
        Length = 24,936

  Plus Strand HSPs:

 Score = 203 (71.5 bits), Expect = 2.4e-14, P = 2.4e-14
 Identities = 39/73 (53%), Positives = 51/73 (69%), Frame = +3

Query:     4 DPKKP--RGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 61
             D  KP  RGK S Y FFV+ C EEHKKK+P+ +V  +E SKKCSE+WKTM   EK +F +
Sbjct: 24573 DMGKPPVRGKTSPYGFFVKMCYEEHKKKYPNENVQVTEISKKCSEKWKTMVDDEKRRFYE 24752

Query:    62 MAKADKARYEREM 74
             +A+ D  RY+ E+
Sbjct: 24753 LAQKDAERYQAEV 24791

 Score = 88 (31.0 bits), Expect = 3.6, P = 0.97
 Identities = 20/71 (28%), Positives = 36/71 (50%), Frame = +3

Query:    89 KDPNAPKRPPSAFFL-FCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKA 147
             K P   K  P  FF+  C E   K K  +  + + +++KK  E W     D+K+ + + A
Sbjct: 24582 KPPVRGKTSPYGFFVKMCYEEHKK-KYPNENVQVTEISKKCSEKWKTMVDDEKRRFYELA 24758

Query:   148 AKLKEKYEKDIA 159
              K  E+Y+ +++
Sbjct: 24759 QKDAERYQAEVS 24794


>X68408 D.melanogaster SSRP1 mRNA
        Length = 2384

  Plus Strand HSPs:

 Score = 201 (70.8 bits), Expect = 2.7e-14, P = 2.7e-14
 Identities = 59/159 (37%), Positives = 85/159 (53%), Frame = +3

Query:    54 KEKGKFEDMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIK 113
             KEK K E   K +K   E+E +T  P    +KKK KD   PKR  +AF L+ ++ R  IK
Sbjct:  1686 KEK-KSEKKEKKEKKHKEKE-RTKKP----SKKK-KDSGKPKRATTAFMLWLNDTRESIK 1844

Query:   114 GEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYR--AKGKPDAAK 171
              E+PG+ + ++AKK GEMW      DK  +E  AAK K++Y  ++  Y+  A G  D  K
Sbjct:  1845 RENPGIKVTEIAKKGGEMWKELK--DKSKWEDAAAKDKQRYHDEMRNYKPEAGGDSDNEK 2018

Query:   172 KGVV----KAEKSKKKKEEEEDEEDEEDEE-EEEDEEDEDEEEDDD 212
              G      K E S  KK        +  E   ++D    D+E+D++
Sbjct:  2019 GGKSSKKRKTEPSPSKKANTSGSGFKSKEYISDDDSTSSDDEKDNE 2156

 Score = 175 (61.6 bits), Expect = 1.6e-11, P = 1.6e-11
 Identities = 55/170 (32%), Positives = 85/170 (50%), Frame = +3

Query:    54 KEKGKFEDMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIK 113
             KEK K E   K +K   E+E +T  P    +KKK KD   PKR  +AF L+ ++ R  IK
Sbjct:  1686 KEK-KSEKKEKKEKKHKEKE-RTKKP----SKKK-KDSGKPKRATTAFMLWLNDTRESIK 1844

Query:   114 GEHPGLSIGDVAKKLGEMWN---------NTAADDKQPYEKKAAKLKEKYEKDI------ 158
              E+PG+ + ++AKK GEMW          + AA DKQ Y  +    K +   D       
Sbjct:  1845 RENPGIKVTEIAKKGGEMWKELKDKSKWEDAAAKDKQRYHDEMRNYKPEAGGDSDNEKGG 2024

Query:   159 -AAYRAKGKPDAAKKGVVKAEKSKKKKE-EEEDEEDEEDEEEEEDEEDEDEEEDDDD 213
              ++ + K +P  +KK        K K+   ++D    +DE++ E  + + +   D D
Sbjct:  2025 KSSKKRKTEPSPSKKANTSGSGFKSKEYISDDDSTSSDDEKDNEPAKKKSKPPSDGD 2195

 Score = 172 (60.5 bits), Expect = 3.4e-11, P = 3.4e-11
 Identities = 56/192 (29%), Positives = 90/192 (46%), Frame = +3

Query:     2 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 61
             K D  KP+   +++  ++   RE  K+++P   V  +E +KK  E WK +  K+K K+ED
Sbjct:  1767 KKDSGKPKRATTAFMLWLNDTRESIKRENPGIKV--TEIAKKGGEMWKEL--KDKSKWED 1934

Query:    62 MAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSI 121
              A  DK RY  EM+ Y P  G      K   + K+  +       E  P  K    G   
Sbjct:  1935 AAAKDKQRYHDEMRNYKPEAGGDSDNEKGGKSSKKRKT-------EPSPSKKANTSGS-- 2087

Query:   122 GDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSK 181
             G  +K+     ++T++DD++  + + AK K K   D  A + K K ++  +     E S 
Sbjct:  2088 GFKSKEYISDDDSTSSDDEK--DNEPAKKKSKPPSDGDAKKKKAKSESEPEE--SEEDSN 2255

Query:   182 KKKEEEEDEEDE 193
                E+EEDE  +
Sbjct:  2256 ASDEDEEDEASD 2291

 Score = 101 (35.6 bits), Expect = 0.10, P = 0.097
 Identities = 52/195 (26%), Positives = 84/195 (43%), Frame = +3

Query:    23 REEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKAR--YERE---MK-T 76
             +E+ +KKH +      E +KK S++ K     ++     M   +  R   +RE   +K T
Sbjct:  1707 KEKKEKKHKE-----KERTKKPSKKKKDSGKPKRATTAFMLWLNDTRESIKRENPGIKVT 1871

Query:    77 YIPPKG-----ETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKL--- 128
              I  KG     E K K K  +A  +    +      Y+P+  G+      G  +KK    
Sbjct:  1872 EIAKKGGEMWKELKDKSKWEDAAAKDKQRYHDEMRNYKPEAGGDSDNEKGGKSSKKRKTE 2051

Query:   129 ---GEMWNNTAADDK-QPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKK 184
                 +  N + +  K + Y           EKD    + K KP +   G  K +K+K + 
Sbjct:  2052 PSPSKKANTSGSGFKSKEYISDDDSTSSDDEKDNEPAKKKSKPPS--DGDAKKKKAKSES 2225

Query:   185 EEEEDEEDEEDEEEEEDEEDED 206
             E EE EED    +E+E++E  D
Sbjct:  2226 EPEESEEDSNASDEDEEDEASD 2291

 Score = 97 (34.1 bits), Expect = 0.29, P = 0.25
 Identities = 52/195 (26%), Positives = 83/195 (42%), Frame = +3

Query:    23 REEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKAR--YERE---MK-T 76
             +E+ +KKH +      E +KK S++ K     ++     M   +  R   +RE   +K T
Sbjct:  1707 KEKKEKKHKE-----KERTKKPSKKKKDSGKPKRATTAFMLWLNDTRESIKRENPGIKVT 1871

Query:    77 YIPPKG-----ETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEM 131
              I  KG     E K K K  +A  +    +      Y+P+  G+      G  +KK    
Sbjct:  1872 EIAKKGGEMWKELKDKSKWEDAAAKDKQRYHDEMRNYKPEAGGDSDNEKGGKSSKKRK-- 2045

Query:   132 WNNTAADDKQPYEKKAAKLKEKYEKD--IAAYRAKGKPDAAKKGVVKAEKSKKKKEEEED 189
                 +   K        K KE    D   ++   K    A KK    ++   KKK+ + +
Sbjct:  2046 -TEPSPSKKANTSGSGFKSKEYISDDDSTSSDDEKDNEPAKKKSKPPSDGDAKKKKAKSE 2222

Query:   190 EEDEEDEEEEEDEEDEDEEEDDDD 213
              E EE EE+  +  DEDEE++  D
Sbjct:  2223 SEPEESEEDS-NASDEDEEDEASD 2291

 Score = 97 (34.1 bits), Expect = 0.29, P = 0.25
 Identities = 51/195 (26%), Positives = 83/195 (42%), Frame = +3

Query:    23 REEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKAR--YERE---MK-T 76
             +E+ +KKH +      E +KK S++ K     ++     M   +  R   +RE   +K T
Sbjct:  1707 KEKKEKKHKE-----KERTKKPSKKKKDSGKPKRATTAFMLWLNDTRESIKRENPGIKVT 1871

Query:    77 YIPPKG-----ETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEM 131
              I  KG     E K K K  +A  +    +      Y+P+  G+      G  +KK    
Sbjct:  1872 EIAKKGGEMWKELKDKSKWEDAAAKDKQRYHDEMRNYKPEAGGDSDNEKGGKSSKKRK-- 2045

Query:   132 WNNTAADDKQPYEKKAAKLKEKYEKD--IAAYRAKGKPDAAKKGVVKAE-KSKKKKEEEE 188
                 +   K        K KE    D   ++   K    A KK    ++  +KKKK + E
Sbjct:  2046 -TEPSPSKKANTSGSGFKSKEYISDDDSTSSDDEKDNEPAKKKSKPPSDGDAKKKKAKSE 2222

Query:   189 DEEDEEDEEEEEDEEDEDEEEDD 211
              E +E +E+    +EDE++E  D
Sbjct:  2223 SEPEESEEDSNASDEDEEDEASD 2291

 Score = 85 (29.9 bits), Expect = 6.7, P = 1.0
 Identities = 53/192 (27%), Positives = 82/192 (42%), Frame = +3

Query:    23 REEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKAR--YERE---MK-T 76
             +E+ +KKH +      E +KK S++ K     ++     M   +  R   +RE   +K T
Sbjct:  1707 KEKKEKKHKE-----KERTKKPSKKKKDSGKPKRATTAFMLWLNDTRESIKRENPGIKVT 1871

Query:    77 YIPPKG-----ETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEM 131
              I  KG     E K K K  +A  +    +      Y+P+  G+      G  +KK    
Sbjct:  1872 EIAKKGGEMWKELKDKSKWEDAAAKDKQRYHDEMRNYKPEAGGDSDNEKGGKSSKKRK-- 2045

Query:   132 WNNTAADDKQPYEKKAAKLKEKYEKD--IAAYRAKGKPDAAKKGVVKAEKSKKKKEEEED 189
                 +   K        K KE    D   ++   K    A KK    ++   KKK+ + +
Sbjct:  2046 -TEPSPSKKANTSGSGFKSKEYISDDDSTSSDDEKDNEPAKKKSKPPSDGDAKKKKAKSE 2222

Query:   190 EEDEEDEEEEEDEEDEDEEEDDDDE 214
              E EE EE+  +  DEDEE    DE
Sbjct:  2223 SEPEESEEDS-NASDEDEE----DE 2282


>I66611 Sequence 10 from patent US 5670621.
        Length = 2384

  Plus Strand HSPs:

 Score = 201 (70.8 bits), Expect = 2.7e-14, P = 2.7e-14
 Identities = 59/159 (37%), Positives = 85/159 (53%), Frame = +3

Query:    54 KEKGKFEDMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIK 113
             KEK K E   K +K   E+E +T  P    +KKK KD   PKR  +AF L+ ++ R  IK
Sbjct:  1686 KEK-KSEKKEKKEKKHKEKE-RTKKP----SKKK-KDSGKPKRATTAFMLWLNDTRESIK 1844

Query:   114 GEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYR--AKGKPDAAK 171
              E+PG+ + ++AKK GEMW      DK  +E  AAK K++Y  ++  Y+  A G  D  K
Sbjct:  1845 RENPGIKVTEIAKKGGEMWKELK--DKSKWEDAAAKDKQRYHDEMRNYKPEAGGDSDNEK 2018

Query:   172 KGVV----KAEKSKKKKEEEEDEEDEEDEE-EEEDEEDEDEEEDDD 212
              G      K E S  KK        +  E   ++D    D+E+D++
Sbjct:  2019 GGKSSKKRKTEPSPSKKANTSGSGFKSKEYISDDDSTSSDDEKDNE 2156

 Score = 175 (61.6 bits), Expect = 1.6e-11, P = 1.6e-11
 Identities = 55/170 (32%), Positives = 85/170 (50%), Frame = +3

Query:    54 KEKGKFEDMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIK 113
             KEK K E   K +K   E+E +T  P    +KKK KD   PKR  +AF L+ ++ R  IK
Sbjct:  1686 KEK-KSEKKEKKEKKHKEKE-RTKKP----SKKK-KDSGKPKRATTAFMLWLNDTRESIK 1844

Query:   114 GEHPGLSIGDVAKKLGEMWN---------NTAADDKQPYEKKAAKLKEKYEKDI------ 158
              E+PG+ + ++AKK GEMW          + AA DKQ Y  +    K +   D       
Sbjct:  1845 RENPGIKVTEIAKKGGEMWKELKDKSKWEDAAAKDKQRYHDEMRNYKPEAGGDSDNEKGG 2024

Query:   159 -AAYRAKGKPDAAKKGVVKAEKSKKKKE-EEEDEEDEEDEEEEEDEEDEDEEEDDDD 213
              ++ + K +P  +KK        K K+   ++D    +DE++ E  + + +   D D
Sbjct:  2025 KSSKKRKTEPSPSKKANTSGSGFKSKEYISDDDSTSSDDEKDNEPAKKKSKPPSDGD 2195

 Score = 172 (60.5 bits), Expect = 3.4e-11, P = 3.4e-11
 Identities = 56/192 (29%), Positives = 90/192 (46%), Frame = +3

Query:     2 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 61
             K D  KP+   +++  ++   RE  K+++P   V  +E +KK  E WK +  K+K K+ED
Sbjct:  1767 KKDSGKPKRATTAFMLWLNDTRESIKRENPGIKV--TEIAKKGGEMWKEL--KDKSKWED 1934

Query:    62 MAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSI 121
              A  DK RY  EM+ Y P  G      K   + K+  +       E  P  K    G   
Sbjct:  1935 AAAKDKQRYHDEMRNYKPEAGGDSDNEKGGKSSKKRKT-------EPSPSKKANTSGS-- 2087

Query:   122 GDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSK 181
             G  +K+     ++T++DD++  + + AK K K   D  A + K K ++  +     E S 
Sbjct:  2088 GFKSKEYISDDDSTSSDDEK--DNEPAKKKSKPPSDGDAKKKKAKSESEPEE--SEEDSN 2255

Query:   182 KKKEEEEDEEDE 193
                E+EEDE  +
Sbjct:  2256 ASDEDEEDEASD 2291

 Score = 101 (35.6 bits), Expect = 0.10, P = 0.097
 Identities = 52/195 (26%), Positives = 84/195 (43%), Frame = +3

Query:    23 REEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKAR--YERE---MK-T 76
             +E+ +KKH +      E +KK S++ K     ++     M   +  R   +RE   +K T
Sbjct:  1707 KEKKEKKHKE-----KERTKKPSKKKKDSGKPKRATTAFMLWLNDTRESIKRENPGIKVT 1871

Query:    77 YIPPKG-----ETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKL--- 128
              I  KG     E K K K  +A  +    +      Y+P+  G+      G  +KK    
Sbjct:  1872 EIAKKGGEMWKELKDKSKWEDAAAKDKQRYHDEMRNYKPEAGGDSDNEKGGKSSKKRKTE 2051

Query:   129 ---GEMWNNTAADDK-QPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKK 184
                 +  N + +  K + Y           EKD    + K KP +   G  K +K+K + 
Sbjct:  2052 PSPSKKANTSGSGFKSKEYISDDDSTSSDDEKDNEPAKKKSKPPS--DGDAKKKKAKSES 2225

Query:   185 EEEEDEEDEEDEEEEEDEEDED 206
             E EE EED    +E+E++E  D
Sbjct:  2226 EPEESEEDSNASDEDEEDEASD 2291

 Score = 97 (34.1 bits), Expect = 0.29, P = 0.25
 Identities = 52/195 (26%), Positives = 83/195 (42%), Frame = +3

Query:    23 REEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKAR--YERE---MK-T 76
             +E+ +KKH +      E +KK S++ K     ++     M   +  R   +RE   +K T
Sbjct:  1707 KEKKEKKHKE-----KERTKKPSKKKKDSGKPKRATTAFMLWLNDTRESIKRENPGIKVT 1871

Query:    77 YIPPKG-----ETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEM 131
              I  KG     E K K K  +A  +    +      Y+P+  G+      G  +KK    
Sbjct:  1872 EIAKKGGEMWKELKDKSKWEDAAAKDKQRYHDEMRNYKPEAGGDSDNEKGGKSSKKRK-- 2045

Query:   132 WNNTAADDKQPYEKKAAKLKEKYEKD--IAAYRAKGKPDAAKKGVVKAEKSKKKKEEEED 189
                 +   K        K KE    D   ++   K    A KK    ++   KKK+ + +
Sbjct:  2046 -TEPSPSKKANTSGSGFKSKEYISDDDSTSSDDEKDNEPAKKKSKPPSDGDAKKKKAKSE 2222

Query:   190 EEDEEDEEEEEDEEDEDEEEDDDD 213
              E EE EE+  +  DEDEE++  D
Sbjct:  2223 SEPEESEEDS-NASDEDEEDEASD 2291

 Score = 97 (34.1 bits), Expect = 0.29, P = 0.25
 Identities = 51/195 (26%), Positives = 83/195 (42%), Frame = +3

Query:    23 REEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKAR--YERE---MK-T 76
             +E+ +KKH +      E +KK S++ K     ++     M   +  R   +RE   +K T
Sbjct:  1707 KEKKEKKHKE-----KERTKKPSKKKKDSGKPKRATTAFMLWLNDTRESIKRENPGIKVT 1871

Query:    77 YIPPKG-----ETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEM 131
              I  KG     E K K K  +A  +    +      Y+P+  G+      G  +KK    
Sbjct:  1872 EIAKKGGEMWKELKDKSKWEDAAAKDKQRYHDEMRNYKPEAGGDSDNEKGGKSSKKRK-- 2045

Query:   132 WNNTAADDKQPYEKKAAKLKEKYEKD--IAAYRAKGKPDAAKKGVVKAE-KSKKKKEEEE 188
                 +   K        K KE    D   ++   K    A KK    ++  +KKKK + E
Sbjct:  2046 -TEPSPSKKANTSGSGFKSKEYISDDDSTSSDDEKDNEPAKKKSKPPSDGDAKKKKAKSE 2222

Query:   189 DEEDEEDEEEEEDEEDEDEEEDD 211
              E +E +E+    +EDE++E  D
Sbjct:  2223 SEPEESEEDSNASDEDEEDEASD 2291

 Score = 85 (29.9 bits), Expect = 6.7, P = 1.0
 Identities = 53/192 (27%), Positives = 82/192 (42%), Frame = +3

Query:    23 REEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKAR--YERE---MK-T 76
             +E+ +KKH +      E +KK S++ K     ++     M   +  R   +RE   +K T
Sbjct:  1707 KEKKEKKHKE-----KERTKKPSKKKKDSGKPKRATTAFMLWLNDTRESIKRENPGIKVT 1871

Query:    77 YIPPKG-----ETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEM 131
              I  KG     E K K K  +A  +    +      Y+P+  G+      G  +KK    
Sbjct:  1872 EIAKKGGEMWKELKDKSKWEDAAAKDKQRYHDEMRNYKPEAGGDSDNEKGGKSSKKRK-- 2045

Query:   132 WNNTAADDKQPYEKKAAKLKEKYEKD--IAAYRAKGKPDAAKKGVVKAEKSKKKKEEEED 189
                 +   K        K KE    D   ++   K    A KK    ++   KKK+ + +
Sbjct:  2046 -TEPSPSKKANTSGSGFKSKEYISDDDSTSSDDEKDNEPAKKKSKPPSDGDAKKKKAKSE 2222

Query:   190 EEDEEDEEEEEDEEDEDEEEDDDDE 214
              E EE EE+  +  DEDEE    DE
Sbjct:  2223 SEPEESEEDS-NASDEDEE----DE 2282


>X57561 X.laevis xUBF mRNA for RNA polymerase I transcription factor
        Length = 2208

  Plus Strand HSPs:

 Score = 180 (63.4 bits), Expect = 4.6e-12, P = 4.6e-12
 Identities = 55/185 (29%), Positives = 87/185 (47%), Frame = +2

Query:    48 WKTMSAKEKGKFEDMAKADKARYEREMKTY--IPPKGETKKKFKDPNAPKRPP-SAFFLF 104
             W  M  KEK  +   A  D+ RYERE+      P      KK K    PK+ P + +  F
Sbjct:  1451 WLNMEKKEKIMWIKKAAEDQKRYERELSDMRSTPAPTTAGKKVKFLGEPKKAPMNGYQKF 1630

Query:   105 CSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYE--------- 155
               E      GE   L + +   ++G  W+  +   K  Y+K A   +  Y          
Sbjct:  1631 SQELLSN--GELNHLPLKERMVEIGSRWHRISPTQKDYYKKLAEDQQRLYRTQFDTWMKG 1804

Query:   156 ---KDIAAYRAKG--KPDAAKKGVVKAEKSK----KKKEEEEDEEDEEDEEEEEDEEDED 206
                +D AAY+ +   K  +  K    + KSK     K +++ED+ED+EDEE+++D++DED
Sbjct:  1805 LSTQDRAAYKEQNTNKRKSTTKIQAPSSKSKLVIQSKSDDDEDDEDDEDEEDDDDDDDED 1984

Query:   207 EEEDDDD 213
             +E+  +D
Sbjct:  1985 KEDSSED 2005

 Score = 143 (50.3 bits), Expect = 3.1e-14, Sum P(2) = 3.1e-14
 Identities = 40/184 (21%), Positives = 87/184 (47%), Frame = +2

Query:     2 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 61
             K  P+ P+  ++ Y  F    R ++ K HP+ S N  + +K  S+++K +  K+K K+  
Sbjct:   392 KKHPEFPKKPLTPYFRFFMEKRAKYAKLHPEMS-NL-DLTKILSKKYKELPEKKKMKYIQ 565

Query:    62 MAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSI 121
               + +K  +ER M  +     +  +  K  + P++P +   L+ +  R      H   S 
Sbjct:   566 DFQREKQDFERNMAKFREEHPDLMQNPKKSDVPEKPKTPQQLWYNHERKVYLKLHADAST 745

Query:   122 GDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKP-DAAKKGVVKAEKS 180
              D+   LG+ W+      +  +  KA + +++YE  +  Y  K    +  ++G+ ++  +
Sbjct:   746 KDIKDALGKQWSQLPDKKRLKWIHKALEQRKQYEGVMREYMQKHPELNITEEGITRSTLT 925

Query:   181 KKKKE 185
             K +++
Sbjct:   926 KAERQ 940

 Score = 139 (48.9 bits), Expect = 2.8e-06, P = 2.8e-06
 Identities = 48/179 (26%), Positives = 86/179 (48%), Frame = +2

Query:    42 KKCSERWKTMSAKEKGKFEDMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPP-SA 100
             KK    W   +A+++ ++E        R   +M++  P      KK K    PK+ P + 
Sbjct:  1466 KKEKIMWIKKAAEDQKRYE--------RELSDMRS-TPAPTTAGKKVKFLGEPKKAPMNG 1618

Query:   101 FFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYE----- 155
             +  F  E      GE   L + +   ++G  W+  +   K  Y+K A   +  Y      
Sbjct:  1619 YQKFSQELLSN--GELNHLPLKERMVEIGSRWHRISPTQKDYYKKLAEDQQRLYRTQFDT 1792

Query:   156 -------KDIAAYRAKGKPDAAKKGVVKAEKSKKK----KEEEEDEEDEEDEEEEEDEED 204
                    +D AAY+ +          ++A  SK K     + ++DE+DE+DE+EE+D++D
Sbjct:  1793 WMKGLSTQDRAAYKEQNTNKRKSTTKIQAPSSKSKLVIQSKSDDDEDDEDDEDEEDDDDD 1972

Query:   205 EDEEEDDDDE 214
             +DE+++D  E
Sbjct:  1973 DDEDKEDSSE 2002

 Score = 125 (44.0 bits), Expect = 1.6e-10, Sum P(2) = 1.6e-10
 Identities = 42/152 (27%), Positives = 71/152 (46%), Frame = +2

Query:    37 FSEFS-KKCSERWKTMSAKEKGKFEDMAKA--DKARYEREMKTYIPPKGETKKKFKDPNA 93
             F  +S   C ++W  +S  E  KF  + +   D   + R      P KG  KK  K P  
Sbjct:   254 FKHYSGSMCRQKWMEIS-NEVRKFRTLTELILDADEHVRH-----PYKG--KKLKKHPEF 409

Query:    94 PKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEK 153
             PK+P + +F F  E R K    HP +S  D+ K L + +       K  Y +   + K+ 
Sbjct:   410 PKKPLTPYFRFFMEKRAKYAKLHPEMSNLDLTKILSKKYKELPEKKKMKYIQDFQREKQD 589

Query:   154 YEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEE 188
             +E+++A +R +  PD  +    K++  +K K  ++
Sbjct:   590 FERNMAKFREE-HPDLMQNPK-KSDVPEKPKTPQQ 688

 Score = 113 (39.8 bits), Expect = 0.0041, P = 0.0041
 Identities = 30/93 (32%), Positives = 52/93 (55%), Frame = +2

Query:   130 EMWNNTAADDKQPYEKKAAK-LKEKYEKDIAAYRAKG--KPDAAKKGVVKAEKSK----K 182
             + +   A D ++ Y  +    +K    +D AAY+ +   K  +  K    + KSK     
Sbjct:  1733 DYYKKLAEDQQRLYRTQFDTWMKGLSTQDRAAYKEQNTNKRKSTTKIQAPSSKSKLVIQS 1912

Query:   183 KKEEEEDEEDEEDEEEEEDEEDEDEE---EDDD 212
             K +++ED+ED+EDEE+++D++DED+E   ED D
Sbjct:  1913 KSDDDEDDEDDEDEEDDDDDDDEDKEDSSEDGD 2011

 Score = 107 (37.7 bits), Expect = 3.1e-14, Sum P(2) = 3.1e-14
 Identities = 19/48 (39%), Positives = 33/48 (68%), Frame = +2

Query:   166 KPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDD 213
             K D+++ G    + S    +E+ +E +E ++EE+E+++DED EEDDDD
Sbjct:  1985 KEDSSEDG----DSSDSSSDEDSEEGEENEDEEDEEDDDEDNEEDDDD 2116

 Score = 107 (37.7 bits), Expect = 3.1e-14, Sum P(2) = 3.1e-14
 Identities = 21/49 (42%), Positives = 36/49 (73%), Frame = +2

Query:   166 KPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             K D+++ G   +  S   ++ EE EE+E++E+EE+D+ED +EE+DDD+E
Sbjct:  1985 KEDSSEDG--DSSDSSSDEDSEEGEENEDEEDEEDDDED-NEEDDDDNE 2122

 Score = 105 (37.0 bits), Expect = 0.035, P = 0.034
 Identities = 32/101 (31%), Positives = 54/101 (53%), Frame = +2

Query:   130 EMWNNTAADDKQPYEKKAAK-LKEKYEKDIAAYRAKG--KPDAAKKGVVKAEKSK----K 182
             + +   A D ++ Y  +    +K    +D AAY+ +   K  +  K    + KSK     
Sbjct:  1733 DYYKKLAEDQQRLYRTQFDTWMKGLSTQDRAAYKEQNTNKRKSTTKIQAPSSKSKLVIQS 1912

Query:   183 KKEEEEDEEDEEDEEEEEDEEDEDEE---EDDD------DE 214
             K +++ED+ED+EDEE+++D++DED+E   ED D      DE
Sbjct:  1913 KSDDDEDDEDDEDEEDDDDDDDEDKEDSSEDGDSSDSSSDE 2035

 Score = 100 (35.2 bits), Expect = 0.13, P = 0.12
 Identities = 30/108 (27%), Positives = 47/108 (43%), Frame = +2

Query:   108 YRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDK--QPYEKKAAKLKEKYEKDIAAYRAKG 165
             YR +      GLS  D A    +  N   +  K   P  K    ++ K + D      + 
Sbjct:  1772 YRTQFDTWMKGLSTQDRAAYKEQNTNKRKSTTKIQAPSSKSKLVIQSKSDDDEDDEDDED 1951

Query:   166 KPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDD 213
             + D         E S +  +  +   DE+ EE EE+E++EDEE+DD+D
Sbjct:  1952 EEDDDDDDDEDKEDSSEDGDSSDSSSDEDSEEGEENEDEEDEEDDDED 2095

 Score = 96 (33.8 bits), Expect = 4.3e-13, Sum P(2) = 4.3e-13
 Identities = 15/32 (46%), Positives = 26/32 (81%), Frame = +2

Query:   177 AEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEE 208
             +++  ++ EE EDEEDEED++E+ +E+D+D E
Sbjct:  2027 SDEDSEEGEENEDEEDEEDDDEDNEEDDDDNE 2122

 Score = 93 (32.7 bits), Expect = 0.81, P = 0.56
 Identities = 23/86 (26%), Positives = 41/86 (47%), Frame = +2

Query:   130 EMW-NNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEE 188
             + W    +  D+  Y+++    K K    I A  +K K     K     +    + EE++
Sbjct:  1787 DTWMKGLSTQDRAAYKEQNTN-KRKSTTKIQAPSSKSKLVIQSKSDDDEDDEDDEDEEDD 1963

Query:   189 DEEDEEDEEEE-EDEEDEDEEEDDDDE 214
             D++D+ED+E+  ED +  D   D+D E
Sbjct:  1964 DDDDDEDKEDSSEDGDSSDSSSDEDSE 2044

 Score = 92 (32.4 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12
 Identities = 17/40 (42%), Positives = 27/40 (67%), Frame = +2

Query:   178 EKSKKKKEEEEDEED---EEDEEEEEDEEDEDEEEDDDDE 214
             ++ K+   E+ D  D   +ED EE E+ EDE++EEDDD++
Sbjct:  1976 DEDKEDSSEDGDSSDSSSDEDSEEGEENEDEEDEEDDDED 2095

 Score = 91 (32.0 bits), Expect = 1.4e-12, Sum P(2) = 1.4e-12
 Identities = 19/39 (48%), Positives = 26/39 (66%), Frame = +2

Query:   178 EKSKKKKEEEEDEEDEE-DEEEEEDEEDEDEE-EDDDDE 214
             ++ K+   E+ D  D   DE+ EE EE+EDEE E+DDDE
Sbjct:  1976 DEDKEDSSEDGDSSDSSSDEDSEEGEENEDEEDEEDDDE 2092

 Score = 90 (31.7 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
 Identities = 42/187 (22%), Positives = 82/187 (43%), Frame = +2

Query:     2 KGD-PKKPRGKMSSYAFFVQTCREEHKKKHPDASVN---------FSEFSKKCSERWKTM 51
             K D P+KP+   +    +    R+ + K H DAS           +S+   K   +W   
Sbjct:   650 KSDVPEKPK---TPQQLWYNHERKVYLKLHADASTKDIKDALGKQWSQLPDKKRLKWIHK 820

Query:    52 SAKEKGKFED-----MAKADKARYERE---MKTYIPPKGETKKKFKDPNAPKRPPSAFFL 103
             + +++ ++E      M K  +     E     T    + + K KF D    K PP+++ +
Sbjct:   821 ALEQRKQYEGVMREYMQKHPELNITEEGITRSTLTKAERQLKDKF-DGRPTKPPPNSYSM 997

Query:   104 FCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRA 163
             +C+E    +K + P     +      + W   +  +K  Y KK  + K+ YE ++  +  
Sbjct:   998 YCAELMANMK-DVPST---ERMVLCSQRWKLLSQKEKDAYHKKCEQRKKDYEVELMRF-L 1162

Query:   164 KGKPDAAKKGVVKAEK 179
             +  P+  ++ V+  EK
Sbjct:  1163 ENLPEEEQQRVLAEEK 1210

 Score = 83 (29.2 bits), Expect = 4.0e-05, Sum P(2) = 4.0e-05
 Identities = 51/197 (25%), Positives = 88/197 (44%), Frame = +2

Query:     3 GDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDM 62
             G P KP    +SY+ +   C E          V  +E    CS+RWK +S KEK  +   
Sbjct:   959 GRPTKP--PPNSYSMY---CAELMANMK---DVPSTERMVLCSQRWKLLSQKEKDAYHKK 1114

Query:    63 AKADKARYEREMKTYIP--PKGETKKKFKDPNAP----KRPPSAFFLFCSEYRPKIKGEH 116
              +  K  YE E+  ++   P+ E ++   +        KR  +      +E   K+K   
Sbjct:  1115 CEQRKKDYEVELMRFLENLPEEEQQRVLAEEKMVGMKRKRTNTPASKMATEDAAKVKSRS 1294

Query:   117 PGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAA-YRAKGKPDAAKK-GV 174
                  G   KK        AA+++    +     +E +++ +   Y A+ K D AK   V
Sbjct:  1295 -----GQADKK-------KAAEERAKLPETPKTAEEIWQQSVIGDYLARFKNDRAKALKV 1438

Query:   175 VKAE-KSKKKKEE----EEDEEDEEDEEEE 199
             ++A   + +KKE+    ++  ED++  E E
Sbjct:  1439 MEATWLNMEKKEKIMWIKKAAEDQKRYERE 1528

 Score = 81 (28.5 bits), Expect = 1.6e-11, Sum P(2) = 1.6e-11
 Identities = 17/47 (36%), Positives = 28/47 (59%), Frame = +2

Query:   177 AEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEE----------DDDD 213
             +++  ++ EE EDEEDEED++E+ +E+D+D E           D  D
Sbjct:  2027 SDEDSEEGEENEDEEDEEDDDEDNEEDDDDNESGSSSSSSSSADSSD 2167

 Score = 79 (27.8 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
 Identities = 42/162 (25%), Positives = 73/162 (45%), Frame = +2

Query:    25 EHKKKHPDASVNFSEFSKKC-SERWKTMSAKEK--GKFEDMAKADKARYEREMKTYIPPK 81
             E +KK  D  V    F +    E  + + A+EK  G          ++   E    +  +
Sbjct:  1118 EQRKK--DYEVELMRFLENLPEEEQQRVLAEEKMVGMKRKRTNTPASKMATEDAAKVKSR 1291

Query:    82 -GET-KKKFKDPNA--PKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEM---WNN 134
              G+  KKK  +  A  P+ P +A  +    ++  + G++      D AK L  M   W N
Sbjct:  1292 SGQADKKKAAEERAKLPETPKTAEEI----WQQSVIGDYLARFKNDRAKALKVMEATWLN 1459

Query:   135 TAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKK 182
                 +K  + KKAA+ +++YE++++  R+   P  A K V    + KK
Sbjct:  1460 MEKKEKIMWIKKAAEDQKRYERELSDMRSTPAPTTAGKKVKFLGEPKK 1603

 Score = 70 (24.6 bits), Expect = 2.1e-10, Sum P(2) = 2.1e-10
 Identities = 16/51 (31%), Positives = 29/51 (56%), Frame = +2

Query:   177 AEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEE--------------EDDDD 213
             +++  ++ EE EDEEDEED++E+ +E+D+D E              + D +
Sbjct:  2027 SDEDSEEGEENEDEEDEEDDDEDNEEDDDDNESGSSSSSSSSADSSDSDSN 2179


>Z35959;Y13134 S.cerevisiae chromosome II reading frame ORF YBR090c
            Length = 1378

  Minus Strand HSPs:

 Score = 198 (69.7 bits), Expect = 3.5e-14, P = 3.5e-14
 Identities = 39/92 (42%), Positives = 55/92 (59%), Frame = -3

Query:    72 REMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEM 131
             +E K    PK  T ++ KDPNAPKR  SA+  F +E R  ++ E+P ++ G V + LGE 
Sbjct:   698 KEAKQPKEPKKRTTRRKKDPNAPKRRLSAYMFFANENRDIVRSENPDVTFGQVGRILGER 519

Query:   132 WNNTAADDKQPYEKKAAKLKEKYEKDIAAYRA 163
             W    A++KQPYE KA   K++YE +   Y A
Sbjct:   518 WKALTAEEKQPYESKAQADKKRYESEKELYNA 423

 Score = 155 (54.6 bits), Expect = 4.9e-09, P = 4.9e-09
 Identities = 30/76 (39%), Positives = 46/76 (60%), Frame = -3

Query:     2 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 61
             K DP  P+ ++S+Y FF    R+  + ++PD  V F +  +   ERWK ++A+EK  +E 
Sbjct:   650 KKDPNAPKRRLSAYMFFANENRDIVRSENPD--VTFGQVGRILGERWKALTAEEKQPYES 477

Query:    62 MAKADKARYEREMKTY 77
              A+ADK RYE E + Y
Sbjct:   476 KAQADKKRYESEKELY 429


>L08825 Drosophila melanogaster single-stranded recognition protein (SSRP)
        Length = 2443

  Plus Strand HSPs:

 Score = 196 (69.0 bits), Expect = 9.3e-14, P = 9.3e-14
 Identities = 58/159 (36%), Positives = 84/159 (52%), Frame = +1

Query:    54 KEKGKFEDMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIK 113
             KEK K E   K +K   E+E +T  P    +KKK KD   PKR  +AF L+ ++ R   K
Sbjct:  1669 KEK-KSEKKEKKEKKHKEKE-RTKKP----SKKK-KDSGKPKRATTAFMLWLNDTRESYK 1827

Query:   114 GEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYR--AKGKPDAAK 171
              E+PG+ + ++AKK GEMW      DK  +E  AAK K++Y  ++  Y+  A G  D  K
Sbjct:  1828 RENPGIKVTEIAKKGGEMWKELK--DKSKWEDAAAKDKQRYHDEMRNYKPEAGGDSDNEK 2001

Query:   172 KGVV----KAEKSKKKKEEEEDEEDEEDEE-EEEDEEDEDEEEDDD 212
              G      K E S  KK        +  E   ++D    D+E+D++
Sbjct:  2002 GGKSSKKRKTEPSPSKKANTSGSGFKSKEYISDDDSTSSDDEKDNE 2139

 Score = 177 (62.3 bits), Expect = 1.0e-11, P = 1.0e-11
 Identities = 56/192 (29%), Positives = 91/192 (47%), Frame = +1

Query:     2 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 61
             K D  KP+   +++  ++   RE +K+++P   V  +E +KK  E WK +  K+K K+ED
Sbjct:  1750 KKDSGKPKRATTAFMLWLNDTRESYKRENPGIKV--TEIAKKGGEMWKEL--KDKSKWED 1917

Query:    62 MAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSI 121
              A  DK RY  EM+ Y P  G      K   + K+  +       E  P  K    G   
Sbjct:  1918 AAAKDKQRYHDEMRNYKPEAGGDSDNEKGGKSSKKRKT-------EPSPSKKANTSGS-- 2070

Query:   122 GDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSK 181
             G  +K+     ++T++DD++  + + AK K K   D  A + K K ++  +     E S 
Sbjct:  2071 GFKSKEYISDDDSTSSDDEK--DNEPAKKKSKPPSDGDAKKKKAKSESEPEE--SEEDSN 2238

Query:   182 KKKEEEEDEEDE 193
                E+EEDE  +
Sbjct:  2239 ASDEDEEDEASD 2274

 Score = 170 (59.8 bits), Expect = 5.6e-11, P = 5.6e-11
 Identities = 54/170 (31%), Positives = 84/170 (49%), Frame = +1

Query:    54 KEKGKFEDMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIK 113
             KEK K E   K +K   E+E +T  P    +KKK KD   PKR  +AF L+ ++ R   K
Sbjct:  1669 KEK-KSEKKEKKEKKHKEKE-RTKKP----SKKK-KDSGKPKRATTAFMLWLNDTRESYK 1827

Query:   114 GEHPGLSIGDVAKKLGEMWN---------NTAADDKQPYEKKAAKLKEKYEKDI------ 158
              E+PG+ + ++AKK GEMW          + AA DKQ Y  +    K +   D       
Sbjct:  1828 RENPGIKVTEIAKKGGEMWKELKDKSKWEDAAAKDKQRYHDEMRNYKPEAGGDSDNEKGG 2007

Query:   159 -AAYRAKGKPDAAKKGVVKAEKSKKKKE-EEEDEEDEEDEEEEEDEEDEDEEEDDDD 213
              ++ + K +P  +KK        K K+   ++D    +DE++ E  + + +   D D
Sbjct:  2008 KSSKKRKTEPSPSKKANTSGSGFKSKEYISDDDSTSSDDEKDNEPAKKKSKPPSDGD 2178

 Score = 105 (37.0 bits), Expect = 0.035, P = 0.035
 Identities = 53/195 (27%), Positives = 84/195 (43%), Frame = +1

Query:    23 REEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKAR--YERE---MK-T 76
             +E+ +KKH +      E +KK S++ K     ++     M   +  R  Y+RE   +K T
Sbjct:  1690 KEKKEKKHKE-----KERTKKPSKKKKDSGKPKRATTAFMLWLNDTRESYKRENPGIKVT 1854

Query:    77 YIPPKG-----ETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEM 131
              I  KG     E K K K  +A  +    +      Y+P+  G+      G  +KK    
Sbjct:  1855 EIAKKGGEMWKELKDKSKWEDAAAKDKQRYHDEMRNYKPEAGGDSDNEKGGKSSKKRK-- 2028

Query:   132 WNNTAADDKQPYEKKAAKLKEKYEKD--IAAYRAKGKPDAAKKGVVKAEKSKKKKEEEED 189
                 +   K        K KE    D   ++   K    A KK    ++   KKK+ + +
Sbjct:  2029 -TEPSPSKKANTSGSGFKSKEYISDDDSTSSDDEKDNEPAKKKSKPPSDGDAKKKKAKSE 2205

Query:   190 EEDEEDEEEEEDEEDEDEEEDDDD 213
              E EE EE+  +  DEDEE++  D
Sbjct:  2206 SEPEESEEDS-NASDEDEEDEASD 2274

 Score = 105 (37.0 bits), Expect = 0.035, P = 0.035
 Identities = 52/195 (26%), Positives = 84/195 (43%), Frame = +1

Query:    23 REEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKAR--YERE---MK-T 76
             +E+ +KKH +      E +KK S++ K     ++     M   +  R  Y+RE   +K T
Sbjct:  1690 KEKKEKKHKE-----KERTKKPSKKKKDSGKPKRATTAFMLWLNDTRESYKRENPGIKVT 1854

Query:    77 YIPPKG-----ETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEM 131
              I  KG     E K K K  +A  +    +      Y+P+  G+      G  +KK    
Sbjct:  1855 EIAKKGGEMWKELKDKSKWEDAAAKDKQRYHDEMRNYKPEAGGDSDNEKGGKSSKKRK-- 2028

Query:   132 WNNTAADDKQPYEKKAAKLKEKYEKD--IAAYRAKGKPDAAKKGVVKAE-KSKKKKEEEE 188
                 +   K        K KE    D   ++   K    A KK    ++  +KKKK + E
Sbjct:  2029 -TEPSPSKKANTSGSGFKSKEYISDDDSTSSDDEKDNEPAKKKSKPPSDGDAKKKKAKSE 2205

Query:   189 DEEDEEDEEEEEDEEDEDEEEDD 211
              E +E +E+    +EDE++E  D
Sbjct:  2206 SEPEESEEDSNASDEDEEDEASD 2274

 Score = 93 (32.7 bits), Expect = 0.83, P = 0.56
 Identities = 54/192 (28%), Positives = 83/192 (43%), Frame = +1

Query:    23 REEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKAR--YERE---MK-T 76
             +E+ +KKH +      E +KK S++ K     ++     M   +  R  Y+RE   +K T
Sbjct:  1690 KEKKEKKHKE-----KERTKKPSKKKKDSGKPKRATTAFMLWLNDTRESYKRENPGIKVT 1854

Query:    77 YIPPKG-----ETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEM 131
              I  KG     E K K K  +A  +    +      Y+P+  G+      G  +KK    
Sbjct:  1855 EIAKKGGEMWKELKDKSKWEDAAAKDKQRYHDEMRNYKPEAGGDSDNEKGGKSSKKRK-- 2028

Query:   132 WNNTAADDKQPYEKKAAKLKEKYEKD--IAAYRAKGKPDAAKKGVVKAEKSKKKKEEEED 189
                 +   K        K KE    D   ++   K    A KK    ++   KKK+ + +
Sbjct:  2029 -TEPSPSKKANTSGSGFKSKEYISDDDSTSSDDEKDNEPAKKKSKPPSDGDAKKKKAKSE 2205

Query:   190 EEDEEDEEEEEDEEDEDEEEDDDDE 214
              E EE EE+  +  DEDEE    DE
Sbjct:  2206 SEPEESEEDS-NASDEDEE----DE 2265


>U80736 Homo sapiens CAGF9 mRNA, partial cds.
        Length = 2224

  Plus Strand HSPs:

 Score = 184 (64.8 bits), Expect = 1.7e-12, P = 1.7e-12
 Identities = 34/79 (43%), Positives = 53/79 (67%), Frame = +1

Query:    85 KKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYE 144
             KKK KDPN P++P SA+ LF  + +  IKG++P  + G+V+K +  MW++   + KQ Y+
Sbjct:     1 KKKKKDPNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYK 180

Query:   145 KKAAKLKEKYEKDIAAYRA 163
             +K    K++Y K +AAYRA
Sbjct:   181 RKTEAAKKEYLKALAAYRA 237

 Score = 98 (34.5 bits), Expect = 0.22, P = 0.20
 Identities = 21/76 (27%), Positives = 41/76 (53%), Frame = +1

Query:     2 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 61
             K DP +P+  +S+YA F +  +   K ++P+A+  F E SK  +  W ++  ++K  ++ 
Sbjct:    10 KKDPNEPQKPVSAYALFFRDTQAAIKGQNPNAT--FGEVSKIVASMWDSLGEEQKQVYKR 183

Query:    62 MAKADKARYEREMKTY 77
               +A K  Y + +  Y
Sbjct:   184 KTEAAKKEYLKALAAY 231


>X80461 M.musculus HMG1-R-145 gene
        Length = 196

  Plus Strand HSPs:

 Score = 130 (45.8 bits), Expect = 2.1e-12, Sum P(2) = 2.1e-12
 Identities = 25/46 (54%), Positives = 34/46 (73%), Frame = +1

Query:     2 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSER 47
             +GDPKKPRG MS YAFFVQTCREEH++      ++ S+ S + ++R
Sbjct:     7 RGDPKKPRGTMSLYAFFVQTCREEHRRD-TQMLLSTSQSSPRSAQR 141

 Score = 127 (44.7 bits), Expect = 1.8e-06, P = 1.8e-06
 Identities = 22/34 (64%), Positives = 28/34 (82%), Frame = +3

Query:    27 KKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 60
             +++HPDASVNFSE SKKCSERWKT   K++G  +
Sbjct:    81 QERHPDASVNFSELSKKCSERWKTCLLKKRGNLK 182

 Score = 66 (23.2 bits), Expect = 2.1e-12, Sum P(2) = 2.1e-12
 Identities = 14/15 (93%), Positives = 14/15 (93%), Frame = +2

Query:    51 MSAKEKGKFEDMAKA 65
             MSAKEKGKFEDMA A
Sbjct:   152 MSAKEKGKFEDMAIA 196


>L31630 Plasmodium falciparum (clone: D10) high mobility group protein,
        Length = 392

  Plus Strand HSPs:

 Score = 171 (60.2 bits), Expect = 1.6e-11, P = 1.6e-11
 Identities = 36/79 (45%), Positives = 48/79 (60%), Frame = +1

Query:    85 KKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS--IGDVAKKLGEMWNNTAADDKQP 142
             +KK KDP+APKR  SA+  F  E R +I  + P LS  +  V K +GE WN     +K P
Sbjct:   112 RKKKKDPHAPKRSLSAYMFFAKEKRAEIISKQPELSKDVATVGKMIGEAWNKLGEKEKAP 291

Query:   143 YEKKAAKLKEKYEKDIAAY 161
             +EKKA + K +YEK+ A Y
Sbjct:   292 FEKKAQEDKLRYEKEKAEY 348

 Score = 143 (50.3 bits), Expect = 1.5e-08, P = 1.5e-08
 Identities = 29/76 (38%), Positives = 39/76 (51%), Frame = +1

Query:     2 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 61
             K DP  P+  +S+Y FF +  R E   K P+ S + +   K   E W  +  KEK  FE 
Sbjct:   121 KKDPHAPKRSLSAYMFFAKEKRAEIISKQPELSKDVATVGKMIGEAWNKLGEKEKAPFEK 300

Query:    62 MAKADKARYEREMKTY 77
              A+ DK RYE+E   Y
Sbjct:   301 KAQEDKLRYEKEKAEY 348


>AF000195 Caenorhabditis elegans cosmid C32F10.
          Length = 30,102

  Minus Strand HSPs:

 Score = 134 (47.2 bits), Expect = 7.6e-11, Sum P(2) = 7.6e-11
 Identities = 34/89 (38%), Positives = 51/89 (57%), Frame = -1

Query:    55 EKGKFEDMAKADKA-RYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIK 113
             E  K E   K +K  + E+ +K     KG   KK KDPN PKR  +A+ ++ +  R  +K
Sbjct: 12183 EPKKKESKEKKNKREKKEKPVKEKAVKKG---KKTKDPNEPKRATTAYIIWFNANRNSMK 12013

Query:   114 GEHPGLSIGDVAKKLGEMWNNTAADDKQPY 143
              +  G ++GDVAKK G  W + +ADDK+ +
Sbjct: 12012 ED--GDTLGDVAKKAGAKWKSMSADDKKVF 11929

 Score = 100 (35.2 bits), Expect = 7.6e-11, Sum P(2) = 7.6e-11
 Identities = 25/76 (32%), Positives = 37/76 (48%), Frame = -1

Query:   132 WNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEE 191
             WN+ AA DK  YE   A++KE Y+K+         P   K       K  K KE   D +
Sbjct: 11793 WNDKAAQDKARYE---AEMKE-YKKNGGGVEKASGPSTKKSSDQSPGKQFKSKEHISDTD 11626

Query:   192 DEEDEEEEEDEEDEDE 207
             D +D+E  + ++DE +
Sbjct: 11625 DSDDDEPLKAKKDESD 11578

 Score = 100 (35.2 bits), Expect = 7.6e-11, Sum P(2) = 7.6e-11
 Identities = 27/83 (32%), Positives = 39/83 (46%), Frame = -1

Query:   132 WNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEE 191
             WN+ AA DK  YE   A++KE Y+K+         P   K       K  K KE   D +
Sbjct: 11793 WNDKAAQDKARYE---AEMKE-YKKNGGGVEKASGPSTKKSSDQSPGKQFKSKEHISDTD 11626

Query:   192 DEEDEEE---EEDEEDEDEEEDDDDE 214
             D +D+E    ++DE D   E   + +
Sbjct: 11625 DSDDDEPLKAKKDESDAASESSGESD 11548

 Score = 68 (23.9 bits), Expect = 0.0025, Sum P(2) = 0.0025
 Identities = 16/56 (28%), Positives = 27/56 (48%), Frame = -1

Query:     4 DPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKF 59
             DP +P+   ++Y  +    R   K+   D      + +KK   +WK+MSA +K  F
Sbjct: 12084 DPNEPKRATTAYIIWFNANRNSMKE---DGDT-LGDVAKKAGAKWKSMSADDKKVF 11929


>M73820 Mouse sex-limited protein (SlpA) gene, exons 24-41, and cytochrome
        Length = 12,544

  Plus Strand HSPs:

 Score = 159 (56.0 bits), Expect = 1.5e-10, Sum P(2) = 1.5e-10
 Identities = 31/71 (43%), Positives = 49/71 (69%), Frame = +2

Query:   144 EKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEE 203
             EKK  + + +  +     + K K    KK   K +K KKKK++EE+EE+EE+EEEEE+EE
Sbjct:  8201 EKKKKRRRRRRRRRRKEKKKKKKKKKKKKKKKKKKKKKKKKKKEEEEEEEEEEEEEEEEE 8380

Query:   204 DEDEEEDDDDE 214
             +E+EEE++++E
Sbjct:  8381 EEEEEEEEEEE 8413

 Score = 157 (55.3 bits), Expect = 1.8e-09, P = 1.8e-09
 Identities = 31/69 (44%), Positives = 47/69 (68%), Frame = +2

Query:   144 EKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEE 203
             +KK  + + +  +     + K K    KK   K +K KKKKEEEE+EE+EE+EEEEE+EE
Sbjct:  8207 KKKRRRRRRRRRRKEKKKKKKKKKKKKKKKKKKKKKKKKKKEEEEEEEEEEEEEEEEEEE 8386

Query:   204 DEDEEEDDD 212
             +E+EEE+++
Sbjct:  8387 EEEEEEEEE 8413

 Score = 145 (51.0 bits), Expect = 5.7e-07, P = 5.7e-07
 Identities = 29/71 (40%), Positives = 47/71 (66%), Frame = +2

Query:   139 DKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEE 198
             +K+   ++  + + + EK     + K K    KK   K +K K+++EEEE+EE+EE+EEE
Sbjct:  8201 EKKKKRRRRRRRRRRKEKKKKKKKKKKKKKKKKKKKKKKKKKKEEEEEEEEEEEEEEEEE 8380

Query:   199 EEDEEDEDEEE 209
             EE+EE+E+EEE
Sbjct:  8381 EEEEEEEEEEE 8413

 Score = 40 (14.1 bits), Expect = 1.5e-10, Sum P(2) = 1.5e-10
 Identities = 9/22 (40%), Positives = 12/22 (54%), Frame = +1

Query:   110 PKIKGEHPGLSIGDVAKKLGEM 131
             P+  G H G S+GD    LG +
Sbjct:  4180 PRRGGVHRGHSLGDSEGLLGHL 4245

  Minus Strand HSPs:

 Score = 99 (34.8 bits), Expect = 0.20, P = 0.18
 Identities = 28/82 (34%), Positives = 42/82 (51%), Frame = -2

Query:   128 LGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEE 187
             L E W     D K P   KA         D     +  +P+  K  +V+    ++   EE
Sbjct: 11484 LQERW*KERHDHKLPRRPKATPGGSL*V*D*PFLHSGFQPN--KGSIVRPNLREEGVVEE 11311

Query:   188 EDEEDEEDEEEEEDEEDEDEEE 209
             E+E++EE+EEE+E EE+E+EEE
Sbjct: 11310 EEEQEEEEEEEKEKEEEEEEEE 11245

 Score = 94 (33.1 bits), Expect = 0.74, P = 0.52
 Identities = 27/83 (32%), Positives = 42/83 (50%), Frame = -2

Query:   128 LGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEE 187
             L E W     D K P   KA         D     +  +P+   KG +     +++   E
Sbjct: 11484 LQERW*KERHDHKLPRRPKATPGGSL*V*D*PFLHSGFQPN---KGSIVRPNLREEGVVE 11314

Query:   188 EDEEDEEDEEEEEDEEDEDEEED 210
             E+EE EE+EEEE+++E+E+EEE+
Sbjct: 11313 EEEEQEEEEEEEKEKEEEEEEEE 11245

 Score = 90 (31.7 bits), Expect = 2.1, P = 0.88
 Identities = 18/43 (41%), Positives = 33/43 (76%), Frame = -2

Query:   166 KPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEE 208
             +P+  ++GVV  E+ ++++EEEE+E+++E+EEEEE+     EE
Sbjct: 11346 RPNLREEGVV--EEEEEQEEEEEEEKEKEEEEEEEEPSCLTEE 11224

 Score = 87 (30.6 bits), Expect = 4.6, P = 0.99
 Identities = 16/29 (55%), Positives = 24/29 (82%), Frame = -2

Query:   186 EEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             EE   E+EE++EEEE+EE E EEE++++E
Sbjct: 11331 EEGVVEEEEEQEEEEEEEKEKEEEEEEEE 11245


>M64933 Mouse nonfunctional sex-limited protein, and cytochrome P-450
        Length = 26,307

  Plus Strand HSPs:

 Score = 162 (57.0 bits), Expect = 1.5e-10, Sum P(2) = 1.5e-10
 Identities = 31/53 (58%), Positives = 42/53 (79%), Frame = +1

Query:   162 RAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             R K K    KK   K +K KKKKEEEE+EE+EE+EEEEE+EE+E+EEE++++E
Sbjct: 20473 RRKEKKKKKKKKKKKKKKKKKKKEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 20631

 Score = 135 (47.5 bits), Expect = 1.2e-05, P = 1.2e-05
 Identities = 29/65 (44%), Positives = 44/65 (67%), Frame = +1

Query:   144 EKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEE 203
             EKK  + + + EK     + K K    KK   K E+ ++++EEEE+EE+EE+EEEEE+EE
Sbjct: 20449 EKKRRRRRRRKEKKKKKKKKKKKKKKKKKK--KEEEEEEEEEEEEEEEEEEEEEEEEEEE 20622

Query:   204 DEDEE 208
             +E+EE
Sbjct: 20623 EEEEE 20637

 Score = 116 (40.8 bits), Expect = 0.0023, P = 0.0023
 Identities = 19/36 (52%), Positives = 33/36 (91%), Frame = +3

Query:   178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDD 213
             EK + ++EEEE+EE++ +EEEEE+EE+E+EEE++++
Sbjct: 20433 EKGEGREEEEEEEEEKGEEEEEEEEEEEEEEEEEEE 20540

 Score = 40 (14.1 bits), Expect = 1.5e-10, Sum P(2) = 1.5e-10
 Identities = 9/22 (40%), Positives = 12/22 (54%), Frame = +3

Query:   110 PKIKGEHPGLSIGDVAKKLGEM 131
             P+  G H G S+GD    LG +
Sbjct: 16443 PRRGGVHRGHSLGDSEGLLGHL 16508

  Minus Strand HSPs:

 Score = 105 (37.0 bits), Expect = 0.042, P = 0.041
 Identities = 31/100 (31%), Positives = 49/100 (49%), Frame = -3

Query:   112 IKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAK 171
             ++   PG   G     L E W     D K P   KA         D     +  +P+  K
Sbjct: 23755 LESNPPGT--GPSPSFLQERW*KERHDHKLPRRPKATPGGSL*V*D*PFLHSGFQPN--K 23588

Query:   172 KGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDD 211
               +V+    ++   EEE+E++EE+EEE+E EE+E+EEE++
Sbjct: 23587 GSIVRPNLKEEGVVEEEEEQEEEEEEEKEKEEEEEEEEEE 23468

 Score = 104 (36.6 bits), Expect = 0.055, P = 0.054
 Identities = 32/99 (32%), Positives = 50/99 (50%), Frame = -3

Query:   112 IKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAK 171
             ++   PG   G     L E W     D K P   KA         D     +  +P+  K
Sbjct: 23755 LESNPPGT--GPSPSFLQERW*KERHDHKLPRRPKATPGGSL*V*D*PFLHSGFQPN--K 23588

Query:   172 KGVVKAE-KSKKKKEEEEDEEDEEDEEEEEDEEDEDEEED 210
               +V+   K +   EEEE++E+EE+EE+E++EE+E+EEE+
Sbjct: 23587 GSIVRPNLKEEGVVEEEEEQEEEEEEEKEKEEEEEEEEEE 23468

 Score = 102 (35.9 bits), Expect = 0.093, P = 0.089
 Identities = 19/43 (44%), Positives = 33/43 (76%), Frame = -3

Query:   166 KPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEE 208
             +P+  ++GVV+ E+ ++++EEEE E++EE+EEEEE+     EE
Sbjct: 23575 RPNLKEEGVVEEEEEQEEEEEEEKEKEEEEEEEEEEPSCLTEE 23447

 Score = 96 (33.8 bits), Expect = 0.44, P = 0.36
 Identities = 17/31 (54%), Positives = 27/31 (87%), Frame = -3

Query:   184 KEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             KEE   EE+EE EEEEE+E++++EEE++++E
Sbjct: 23563 KEEGVVEEEEEQEEEEEEEKEKEEEEEEEEE 23471


>M93254 Chironomus tentans high mobility group protein 1b (HMG1b) mRNA,
        Length = 828

  Plus Strand HSPs:

 Score = 160 (56.3 bits), Expect = 1.9e-10, P = 1.9e-10
 Identities = 42/117 (35%), Positives = 59/117 (50%), Frame = +1

Query:    81 KGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDK 140
             K   K K  D   PKRP SA+ L+ +  R  IK E+P   + +VAKK GE+W      DK
Sbjct:    31 KKANKNKMADK--PKRPLSAYMLWLNSARESIKRENPDFKVTEVAKKGGELWRGLK--DK 198

Query:   141 QPYEKKAAKLKEKYEKDIAAYRAKGK--PDAAKK--GVVKAEKSKKKKEEEEDEEDEEDE 196
               +E KAA  K+ Y + +  Y   G    D  KK  G    + + KK ++    +D+ D 
Sbjct:   199 SEWEAKAATAKQNYIRALQEYERNGGGGDDKGKKRKGAAPKKGAGKKSKKGAHSDDDGDS 378

Query:   197 E 197
             E
Sbjct:   379 E 381

 Score = 110 (38.7 bits), Expect = 0.0052, P = 0.0052
 Identities = 29/90 (32%), Positives = 50/90 (55%), Frame = +1

Query:     7 KPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKAD 66
             KP+  +S+Y  ++ + RE  K+++PD  V  +E +KK  E W+ +  K+K ++E  A   
Sbjct:    61 KPKRPLSAYMLWLNSARESIKRENPDFKV--TEVAKKGGELWRGL--KDKSEWEAKAATA 228

Query:    67 KARYEREMKTYIPPKG--ETKKKFKDPNAPKR 96
             K  Y R ++ Y    G  + K K +   APK+
Sbjct:   229 KQNYIRALQEYERNGGGGDDKGKKRKGAAPKK 324


>X80464 M.musculus HMG1-R-161 gene
        Length = 195

  Plus Strand HSPs:

 Score = 160 (56.3 bits), Expect = 4.6e-10, P = 4.6e-10
 Identities = 33/64 (51%), Positives = 39/64 (60%), Frame = +1

Query:     1 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE 60
             GK DPKK   +               +++ P    NFSEFSKKCSERW+TM+AKEKGKFE
Sbjct:     4 GKKDPKKAERQNVLICILFANLLGVAQEEAPGCFFNFSEFSKKCSERWETMTAKEKGKFE 183

Query:    61 DMAK 64
             DM K
Sbjct:   184 DMGK 195


>U01348 Rattus norvegicus clone B-0/7 arylamine N-acetyltransferase mRNA,
        Length = 1385

  Minus Strand HSPs:

 Score = 159 (56.0 bits), Expect = 6.1e-10, P = 6.1e-10
 Identities = 27/32 (84%), Positives = 31/32 (96%), Frame = -1

Query:    21 TCREEHKKKHPDASVNFSEFSKKCSERWKTMS 52
             +C+EEHKKKHPD+SVNF+EF KKCSERWKTMS
Sbjct:   134 SCQEEHKKKHPDSSVNFAEFLKKCSERWKTMS 39

 Score = 99 (34.8 bits), Expect = 0.15, P = 0.14
 Identities = 19/29 (65%), Positives = 21/29 (72%), Frame = -3

Query:     1 GKGDPKKPRGKMSSYAFFVQTCREEHKKK 29
             GKGDP KPRGKMSSYAFFV    +E   +
Sbjct:   186 GKGDPNKPRGKMSSYAFFVPGGAQEEASR 100


>U01343 Rattus norvegicus clone A-1 arylamine N-acetyltransferase mRNA,
        Length = 1418

  Minus Strand HSPs:

 Score = 159 (56.0 bits), Expect = 6.2e-10, P = 6.2e-10
 Identities = 27/32 (84%), Positives = 31/32 (96%), Frame = -1

Query:    21 TCREEHKKKHPDASVNFSEFSKKCSERWKTMS 52
             +C+EEHKKKHPD+SVNF+EF KKCSERWKTMS
Sbjct:   137 SCQEEHKKKHPDSSVNFAEFLKKCSERWKTMS 42

 Score = 99 (34.8 bits), Expect = 0.15, P = 0.14
 Identities = 19/29 (65%), Positives = 21/29 (72%), Frame = -3

Query:     1 GKGDPKKPRGKMSSYAFFVQTCREEHKKK 29
             GKGDP KPRGKMSSYAFFV    +E   +
Sbjct:   189 GKGDPNKPRGKMSSYAFFVPGGAQEEASR 103


>U01345 Rattus norvegicus clone A-3 arylamine N-acetyltransferase mRNA,
        Length = 478

  Minus Strand HSPs:

 Score = 155 (54.6 bits), Expect = 6.4e-10, P = 6.4e-10
 Identities = 26/31 (83%), Positives = 30/31 (96%), Frame = -2

Query:    21 TCREEHKKKHPDASVNFSEFSKKCSERWKTM 51
             +C+EEHKKKHPD+SVNF+EF KKCSERWKTM
Sbjct:   192 SCQEEHKKKHPDSSVNFAEFLKKCSERWKTM 100

 Score = 99 (34.8 bits), Expect = 0.031, P = 0.031
 Identities = 19/29 (65%), Positives = 21/29 (72%), Frame = -1

Query:     1 GKGDPKKPRGKMSSYAFFVQTCREEHKKK 29
             GKGDP KPRGKMSSYAFFV    +E   +
Sbjct:   244 GKGDPNKPRGKMSSYAFFVPGGAQEEASR 158


>U10401 Caenorhabditis elegans cosmid T20B12
        Length = 36,811

  Minus Strand HSPs:

 Score = 128 (45.1 bits), Expect = 9.6e-10, Sum P(2) = 9.6e-10
 Identities = 36/90 (40%), Positives = 51/90 (56%), Frame = -1

Query:    52 SAKEKGKFEDMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPK 111
             S + KG  E   K +K + +RE K     +G+  KK KDPNAPKR  SA+  +    R +
Sbjct: 14866 SKRRKG--EPKEKREK-KEKREKK-----EGKKGKKDKDPNAPKRATSAYMQWFLASRNE 14711

Query:   112 IKGEHPGLSIGDVAKKLGEMWNNTAADDKQ 141
             +K +  G S+ DVAKK G  W   ++DDK+
Sbjct: 14710 LKED--GDSVADVAKKGGAKWKTMSSDDKK 14627

 Score = 98 (34.5 bits), Expect = 9.6e-10, Sum P(2) = 9.6e-10
 Identities = 26/82 (31%), Positives = 43/82 (52%), Frame = -2

Query:   141 QPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKK-GVVKAEK-----SKKK---KEEEEDEE 191
             Q +E+KA + K +YEK++  YR  G P ++ K    K  K     S  K   KE   D +
Sbjct: 14577 QKWEEKAEEDKSRYEKEMKEYRKNGPPSSSSKPSSSKTSKKSSGPSSSKAISKEYISDSD 14398

Query:   192 DEEDEEEEEDEEDEDEEEDDDD 213
             D +DEE ++ E+    +E+ ++
Sbjct: 14397 DSDDEEPKKKEKKAAPKEESEE 14332

 Score = 94 (33.1 bits), Expect = 2.5e-09, Sum P(2) = 2.5e-09
 Identities = 27/85 (31%), Positives = 45/85 (52%), Frame = -2

Query:   141 QPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKK-GVVKAEK-----SKKK---KEEEEDEE 191
             Q +E+KA + K +YEK++  YR  G P ++ K    K  K     S  K   KE   D +
Sbjct: 14577 QKWEEKAEEDKSRYEKEMKEYRKNGPPSSSSKPSSSKTSKKSSGPSSSKAISKEYISDSD 14398

Query:   192 DEEDEEEEEDEED---EDEEEDDDD 213
             D +DEE ++ E+    ++E E+ ++
Sbjct: 14397 DSDDEEPKKKEKKAAPKEESEESNN 14323

 Score = 94 (33.1 bits), Expect = 2.5e-09, Sum P(2) = 2.5e-09
 Identities = 28/88 (31%), Positives = 45/88 (51%), Frame = -2

Query:   141 QPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKK-GVVKAEK-----SKKK---KEEEEDEE 191
             Q +E+KA + K +YEK++  YR  G P ++ K    K  K     S  K   KE   D +
Sbjct: 14577 QKWEEKAEEDKSRYEKEMKEYRKNGPPSSSSKPSSSKTSKKSSGPSSSKAISKEYISDSD 14398

Query:   192 DEEDEEEEEDEE-----DEDEEEDDDDE 214
             D +DEE ++ E+     +E EE ++  +
Sbjct: 14397 DSDDEEPKKKEKKAAPKEESEESNNGSD 14314

 Score = 80 (28.2 bits), Expect = 0.72, Sum P(3) = 0.51
 Identities = 19/54 (35%), Positives = 27/54 (50%), Frame = -2

Query:    58 KFEDMAKADKARYEREMKTYI---PPKGETKKKFKDPNAPKRPPSAFFLFCSEY 108
             K+E+ A+ DK+RYE+EMK Y    PP   +K      +     PS+      EY
Sbjct: 14574 KWEEKAEEDKSRYEKEMKEYRKNGPPSSSSKPSSSKTSKKSSGPSSSKAISKEY 14413

 Score = 67 (23.6 bits), Expect = 0.0064, Sum P(2) = 0.0064
 Identities = 17/53 (32%), Positives = 28/53 (52%), Frame = -1

Query:     4 DPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEK 56
             DP  P+   S+Y  +    R E K+   D   + ++ +KK   +WKTMS+ +K
Sbjct: 14776 DPNAPKRATSAYMQWFLASRNELKE---DGD-SVADVAKKGGAKWKTMSSDDK 14630

 Score = 65 (22.9 bits), Expect = 2.3e-06, Sum P(2) = 2.3e-06
 Identities = 23/97 (23%), Positives = 40/97 (41%), Frame = -2

Query:   130 EMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEK-SKKKKEEEE 188
             + W   A +DK  YEK+  + ++      ++  +  K      G   ++  SK+   + +
Sbjct: 14577 QKWEEKAEEDKSRYEKEMKEYRKNGPPSSSSKPSSSKTSKKSSGPSSSKAISKEYISDSD 14398

Query:   189 DEEDEED----------EEEEE-----DEEDEDEEED 210
             D +DEE           EE EE     D  DE ++ D
Sbjct: 14397 DSDDEEPKKKEKKAAPKEESEESNNGSDGSDESDDSD 14287

 Score = 46 (16.2 bits), Expect = 0.00020, Sum P(2) = 0.00020
 Identities = 10/21 (47%), Positives = 15/21 (71%), Frame = -3

Query:   194 EDEEEEEDEEDEDEE--EDDD 212
             +D  ++EDEED + +  EDDD
Sbjct:  9674 DDLVQDEDEEDVEVDVVEDDD 9612

 Score = 45 (15.8 bits), Expect = 0.00026, Sum P(2) = 0.00026
 Identities = 8/18 (44%), Positives = 14/18 (77%), Frame = -3

Query:   186 EEEDEEDEEDEEEEEDEE 203
             ++EDEED E +  E+D++
Sbjct:  9662 QDEDEEDVEVDVVEDDDK 9609

 Score = 44 (15.5 bits), Expect = 0.00032, Sum P(2) = 0.00032
 Identities = 9/20 (45%), Positives = 13/20 (65%), Frame = -3

Query:   190 EEDEEDEEEEEDEEDEDEEE 209
             +EDEED E +  E+D+   E
Sbjct:  9659 DEDEEDVEVDVVEDDDKSME 9600

 Score = 44 (15.5 bits), Expect = 0.00032, Sum P(2) = 0.00032
 Identities = 9/21 (42%), Positives = 14/21 (66%), Frame = -3

Query:   194 EDEEEEEDEEDEDEEEDDDDE 214
             +DE+EE+ E D  E++D   E
Sbjct:  9662 QDEDEEDVEVDVVEDDDKSME 9600

 Score = 44 (15.5 bits), Expect = 1.3, Sum P(2) = 0.72
 Identities = 13/38 (34%), Positives = 20/38 (52%), Frame = -2

Query:    38 SEFSKKCSERWKTMSAKEKGKFEDMAKADKARYEREMK 75
             S+  ++  ER   ++ K +GK     K  KAR ER+ K
Sbjct: 14880 SKMFRRSEER---VNLKRRGKRRRKEKRRKARKERKTK 14776

 Score = 41 (14.4 bits), Expect = 0.00065, Sum P(2) = 0.00065
 Identities = 8/22 (36%), Positives = 15/22 (68%), Frame = -3

Query:   188 EDEEDEEDEEEEEDEEDEDEEE 209
             +D   +EDEE+ E +  ED+++
Sbjct:  9674 DDLVQDEDEEDVEVDVVEDDDK 9609


>Z48008;Z71256 S.cerevisiae chromosome IV cosmid 8119.
            Length = 37,404

  Minus Strand HSPs:

 Score = 159 (56.0 bits), Expect = 1.1e-09, P = 1.1e-09
 Identities = 44/134 (32%), Positives = 72/134 (53%), Frame = -2

Query:    68 ARYEREMKTYIPPKGETKK---KFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDV 124
             A +++E+ T    K +TK+   K +DPN PKRP +A+ L+C   + +I+ ++  L   DV
Sbjct:  6980 ASFKQELLTKPFRKSKTKRHKVKERDPNMPKRPTNAYLLYCEMNKERIR-QNGSL---DV 6813

Query:   125 AKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAK-GKPDAAKKGVVKAEKSKKK 183
              + L E W N    D++PY K  ++ +E+Y+ ++  Y  K    DA      K E  +K 
Sbjct:  6812 TRDLAEGWKNLNEQDRKPYYKLYSEDRERYQMEMEIYNKKISNIDADDD---KEENEQKI 6642

Query:   184 KEEEEDEEDE-EDEEEEED 201
             K  EE    +  D +  ED
Sbjct:  6641 KNNEEGSSTKVADSKGGED 6585


>X53858 Rat TTF-1 mRNA for thyroid nuclear factor 1
        Length = 2326

  Minus Strand HSPs:

 Score = 150 (52.8 bits), Expect = 3.3e-09, Sum P(2) = 3.3e-09
 Identities = 30/71 (42%), Positives = 48/71 (67%), Frame = -1

Query:   144 EKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEE 203
             E+K  ++KEK  K     + KG     +K   K E+ ++++EE E EE EE+EEEEE+EE
Sbjct:  1615 ERKGRRMKEKKGKRRKRRKRKGGVGTRRKRRKKEEEEEEEEEEAEKEEGEEEEEEEEEEE 1436

Query:   204 DEDEEEDDDDE 214
             +E+EEE++++E
Sbjct:  1435 EEEEEEEEEEE 1403

 Score = 142 (50.0 bits), Expect = 9.7e-08, Sum P(2) = 9.7e-08
 Identities = 31/71 (43%), Positives = 49/71 (69%), Frame = -1

Query:   144 EKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEE 203
             E+K  ++KEK  K     R K +    +KG V   + ++KKEEEE+EE+EE E+EE +EE
Sbjct:  1615 ERKGRRMKEKKGK-----RRKRRK---RKGGVGTRRKRRKKEEEEEEEEEEAEKEEGEEE 1460

Query:   204 DEDEEEDDDDE 214
             +E+EEE++++E
Sbjct:  1459 EEEEEEEEEEE 1427

 Score = 128 (45.1 bits), Expect = 9.9e-06, Sum P(2) = 9.9e-06
 Identities = 25/77 (32%), Positives = 51/77 (66%), Frame = -1

Query:   138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197
             ++++  E++ A+ +E  E++      + + +  ++    A  +    EEEE+EE+EE+EE
Sbjct:  1516 EEEEEEEEEEAEKEEGEEEEEEEEEEEEEEEEEEEEEEAAAAAAAAAEEEEEEEEEEEEE 1337

Query:   198 EEEDEEDEDEEEDDDDE 214
             EEE+EE+E+EEE++++E
Sbjct:  1336 EEEEEEEEEEEEEEEEE 1286

 Score = 123 (43.3 bits), Expect = 4.5e-05, Sum P(2) = 4.5e-05
 Identities = 24/70 (34%), Positives = 47/70 (67%), Frame = -1

Query:   138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197
             +++   E+   + +E+ E++      + + +AA      AE+ ++++EEEE+EE+EE+EE
Sbjct:  1495 EEEAEKEEGEEEEEEEEEEEEEEEEEEEEEEAAAAAAAAAEEEEEEEEEEEEEEEEEEEE 1316

Query:   198 EEEDEEDEDE 207
             EEE+EE+E+E
Sbjct:  1315 EEEEEEEEEE 1286

 Score = 110 (38.7 bits), Expect = 0.0018, Sum P(2) = 0.0018
 Identities = 23/67 (34%), Positives = 45/67 (67%), Frame = -1

Query:   139 DKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEE 198
             +K+  E++  + +E+ E++      + +  AA     + E+ ++++EEEE+EE+EE+EEE
Sbjct:  1483 EKEEGEEEEEEEEEEEEEE-EEEEEEEEAAAAAAAAAEEEEEEEEEEEEEEEEEEEEEEE 1307

Query:   199 EEDEEDE 205
             EE+EE+E
Sbjct:  1306 EEEEEEE 1286

 Score = 91 (32.0 bits), Expect = 0.31, Sum P(2) = 0.27
 Identities = 21/60 (35%), Positives = 36/60 (60%), Frame = -2

Query:   140 KQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEE 199
             K+  +KK  K K+K ++     + K K    KK   K +K KKKK++++ ++ +E+EEEE
Sbjct:  1446 KKKKKKKKKKKKKKKQQQQQQQQQKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKEEEEEE 1267

 Score = 90 (31.7 bits), Expect = 0.41, Sum P(2) = 0.34
 Identities = 19/72 (26%), Positives = 45/72 (62%), Frame = -2

Query:   140 KQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEE 199
             K+  EKK  K K+K +K     + K K    ++   K +K KKKK++++ ++ ++ ++++
Sbjct:  1482 KKKKEKKKKKKKKKKKKKKKKKKKKKKQQQQQQQQQKKKKKKKKKKKKKKKKKKKKKKKK 1303

Query:   200 EDEEDEDEEEDD 211
             + ++ ++EEE++
Sbjct:  1302 KKKKKKEEEEEE 1267

 Score = 87 (30.6 bits), Expect = 0.91, Sum P(2) = 0.60
 Identities = 19/60 (31%), Positives = 36/60 (60%), Frame = -2

Query:   140 KQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEE 199
             K+  +KK  K K++ ++     + K K    KK   K +K KKKK++++ +E+EE+E ++
Sbjct:  1437 KKKKKKKKKKKKQQQQQQQQQKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKEEEEEEVQQ 1258

 Score = 46 (16.2 bits), Expect = 3.3e-09, Sum P(2) = 3.3e-09
 Identities = 9/25 (36%), Positives = 15/25 (60%), Frame = -3

Query:    80 PKGETKKKFKDP-NAPKRPPSAFFL 103
             P+     K ++P   P+RPP+ FF+
Sbjct:  1790 PQNCAMPKLENPFELPERPPNLFFV 1716


>J03998 P.falciparum glutamic acid-rich protein gnen, complete cds.
        Length = 2384

  Plus Strand HSPs:

 Score = 156 (54.9 bits), Expect = 3.5e-09, P = 3.5e-09
 Identities = 37/104 (35%), Positives = 66/104 (63%), Frame = +3

Query:   111 KIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKE-KYEKDIAAYRAKGKPDA 169
             K K E   LSI +  + +G +        +  ++KK AK++E + +K     + + K + 
Sbjct:  1803 KSKVEEKNLSIQE--QLIGTIGRVNVVPRRDNHKKKMAKIEEAELQKQKHVDKEEDKKEE 1976

Query:   170 AKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             +K+  V+ E  + +++EEE EEDEE+EEEEE+EE+E+EEE++++E
Sbjct:  1977 SKE--VQEESKEVQEDEEEVEEDEEEEEEEEEEEEEEEEEEEEEE 2105

 Score = 154 (54.2 bits), Expect = 1.4e-08, P = 1.4e-08
 Identities = 28/76 (36%), Positives = 54/76 (71%), Frame = +3

Query:   139 DKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEE 198
             DK+  +K+ +K  ++  K++     + + D  ++   + E+ ++++EEEE+EE+EE+EEE
Sbjct:  1950 DKEEDKKEESKEVQEESKEVQEDEEEVEEDEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 2129

Query:   199 EEDEEDEDEEEDDDDE 214
             +EDEEDED+ E+D+D+
Sbjct:  2130 DEDEEDEDDAEEDEDD 2177

 Score = 144 (50.7 bits), Expect = 6.0e-07, P = 6.0e-07
 Identities = 33/89 (37%), Positives = 59/89 (66%), Frame = +3

Query:   126 KKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKE 185
             KK+ ++    A   KQ +  K    KE+  K++     + + D  ++ V + E+ ++++E
Sbjct:  1899 KKMAKI--EEAELQKQKHVDKEEDKKEE-SKEVQEESKEVQED--EEEVEEDEEEEEEEE 2063

Query:   186 EEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             EEE+EE+EE+EEEEE+EE+E+E+ED++DE
Sbjct:  2064 EEEEEEEEEEEEEEEEEEEEEEDEDEEDE 2150

 Score = 135 (47.5 bits), Expect = 9.6e-06, P = 9.6e-06
 Identities = 24/77 (31%), Positives = 52/77 (67%), Frame = +3

Query:   138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197
             ++++  E++  + +E+ E++      + + D  ++    AE+ +   EE+ED+ +E+D+E
Sbjct:  2040 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEDEDEEDEDDAEEDEDDAEEDEDDAEEDDDE 2219

Query:   198 EEEDEEDEDEEEDDDDE 214
             E++DEED+DE+ED+D+E
Sbjct:  2220 EDDDEEDDDEDEDEDEE 2270

 Score = 129 (45.4 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
 Identities = 26/79 (32%), Positives = 53/79 (67%), Frame = +3

Query:   138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEED--EED 195
             ++++  E++  + +E+ E++      +   D A++    AE+ +   EE++DEED  EED
Sbjct:  2061 EEEEEEEEEEEEEEEEEEEEEEEDEDEEDEDDAEEDEDDAEEDEDDAEEDDDEEDDDEED 2240

Query:   196 EEEEEDEEDEDEEEDDDDE 214
             ++E+EDE++EDEEE++++E
Sbjct:  2241 DDEDEDEDEEDEEEEEEEE 2297

 Score = 125 (44.0 bits), Expect = 4.9e-06, Sum P(2) = 4.9e-06
 Identities = 26/81 (32%), Positives = 53/81 (65%), Frame = +3

Query:   138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEE--- 194
             ++++  E++  + +E+ E++      +   D A++    AE+ +   EE++DEED++   
Sbjct:  2061 EEEEEEEEEEEEEEEEEEEEEEEDEDEEDEDDAEEDEDDAEEDEDDAEEDDDEEDDDEED 2240

Query:   195 -DEEEEEDEEDEDEEEDDDDE 214
              DE+E+EDEEDE+EEE++++E
Sbjct:  2241 DDEDEDEDEEDEEEEEEEEEE 2303

 Score = 121 (42.6 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
 Identities = 25/77 (32%), Positives = 52/77 (67%), Frame = +3

Query:   138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197
             ++++  E++  + +E+ E +     A+   D A++    AE+     +EE+D+E+++DE+
Sbjct:  2082 EEEEEEEEEEEEEEEEDEDEEDEDDAEEDEDDAEEDEDDAEEDD---DEEDDDEEDDDED 2252

Query:   198 EEEDEEDEDEEEDDDDE 214
             E+EDEEDE+EEE++++E
Sbjct:  2253 EDEDEEDEEEEEEEEEE 2303

 Score = 102 (35.9 bits), Expect = 0.078, P = 0.075
 Identities = 27/75 (36%), Positives = 41/75 (54%), Frame = +3

Query:   140 KQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEE 199
             K+  E+K  K +EK  K       K K    KK   K EK +KKKEE+E ++ + D+E E
Sbjct:  1158 KKKQEEKEKKKQEKERKKQEKKERKQKEKEMKKQK-KIEKERKKKEEKEKKKKKHDKENE 1334

Query:   200 E--DEEDEDEEEDDDD 213
             E   + D+  EE +++
Sbjct:  1335 ETMQQPDQTSEETNNE 1382

 Score = 97 (34.1 bits), Expect = 0.013, Sum P(2) = 0.013
 Identities = 16/32 (50%), Positives = 27/32 (84%), Frame = +3

Query:   178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEE 209
             E   ++ ++E+++EDEEDEEEEE+EE+E E++
Sbjct:  2220 EDDDEEDDDEDEDEDEEDEEEEEEEEEESEKK 2315

 Score = 90 (31.7 bits), Expect = 1.8, P = 0.84
 Identities = 48/186 (25%), Positives = 88/186 (47%), Frame = +3

Query:    24 EEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARYEREMKTYIPPKGE 83
             E+ KKK  +      E  K+  ER K    + K K ++M K  K   ER+ K     K +
Sbjct:  1149 EKKKKKQEE-----KEKKKQEKERKKQEKKERKQKEKEMKKQKKIEKERKKKE---EKEK 1304

Query:    84 TKKKFKDPNAP--KRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWN--NTAADD 139
              KKK    N    ++P        +E    +      ++  +  K+ GE     +   + 
Sbjct:  1305 KKKKHDKENEETMQQPDQTSEETNNEIMVPLPSPLTDVTTPEEHKE-GEHKEEEHKEGEH 1481

Query:   140 KQPYEKKAAKLKEKYEKD---IAAYRAKGKPDAAKKGVVKAEKSKKKKEEE---EDEEDE 193
             K+   K+    +E+++K+      +++KGK D  KK   K +K+KK+K ++   ++  ++
Sbjct:  1482 KEGEHKEEEHKEEEHKKEEHKSKEHKSKGKKDKGKKDKGKHKKAKKEKVKKHVVKNVIED 1661

Query:   194 EDEEEEEDEEDEDEE 208
             ED++  E    ED+E
Sbjct:  1662 EDKDGVEIINLEDKE 1706

 Score = 89 (31.3 bits), Expect = 2.4, P = 0.91
 Identities = 46/191 (24%), Positives = 91/191 (47%), Frame = +3

Query:    23 REEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARYEREMKTYIPPKG 82
             +++ +KKH        E  +K  ++ K    ++K K E   K DK + E      +   G
Sbjct:   675 KDKKEKKHKKDK---KEKKEKKDKKEKKDKKEKKHKKEKKHKKDKKKKENSEVMSLYKTG 845

Query:    83 ETKKK----FKDPNAPKRPPSAF-------FLFCSEYRPKIKGEHPGLSIGDVAKKLGEM 131
             + K K      + N  +   S          L  S Y+ + +G   G  I      + E 
Sbjct:   846 QHKPKNATEHGEENLDEEMVSEINNNAQGGLLLSSPYQYREQG---GCGI---ISSVHET 1007

Query:   132 WNNTAADDKQPY--EKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEED 189
              N+T  +DK+    +KK    +E+  K +     K K    +K + + EK +KKK+++E+
Sbjct:  1008 SNDTKDNDKENISEDKKEDHQQEEMLKTLDKKERKQK----EKEMKEQEKIEKKKKKQEE 1175

Query:   190 EEDEEDEEEEEDEEDEDEEEDDDD 213
             +E ++ E+E + +E ++ ++ + +
Sbjct:  1176 KEKKKQEKERKKQEKKERKQKEKE 1247

 Score = 84 (29.6 bits), Expect = 8.7, P = 1.0
 Identities = 20/71 (28%), Positives = 42/71 (59%), Frame = +3

Query:   144 EKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEE 203
             +KK  K KEK  K+      K K    K+   K EK +KK+E++E ++ E++ ++++  E
Sbjct:  1095 DKKERKQKEKEMKEQEKIEKKKKKQEEKEKK-KQEKERKKQEKKERKQKEKEMKKQKKIE 1271

Query:   204 DEDEEEDDDDE 214
              E +++++ ++
Sbjct:  1272 KERKKKEEKEK 1304

 Score = 53 (18.7 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
 Identities = 15/50 (30%), Positives = 23/50 (46%), Frame = +3

Query:    24 EEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARYERE 73
             E  K+KH D   +  E SK+  E  K +   E+   ED  + ++   E E
Sbjct:  1926 ELQKQKHVDKEEDKKEESKEVQEESKEVQEDEEEVEEDEEEEEEEEEEEE 2075

 Score = 49 (17.2 bits), Expect = 0.033, Sum P(2) = 0.032
 Identities = 21/67 (31%), Positives = 31/67 (46%), Frame = +1

Query:    23 REEHKKKHPDASVNFSEFSKKCSERWKTMSAK-EKGKFEDMAKADKARYEREMKTYIPPK 81
             R++ KKK      N   + KK  +R+K M  K +K K +   K  K + ++  K     K
Sbjct:  1954 RKKTKKK------NLKRY-KKNLKRYKKMKKK*KKMKKKKKKKRKKKKRKKRKKKKRKKK 2112

Query:    82 GETKKKFK 89
                KKK K
Sbjct:  2113 KRKKKKMK 2136


>M81360 Babesia bovis non-histone protein mRNA, complete cds.
        Length = 401

  Plus Strand HSPs:

 Score = 147 (51.7 bits), Expect = 5.4e-09, P = 5.4e-09
 Identities = 28/79 (35%), Positives = 49/79 (62%), Frame = +3

Query:    85 KKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS--IGDVAKKLGEMWNNTAADDKQP 142
             +K  KDPNAPKR  S++  F  E R +I  E+P ++  +  + K +G  WN  + ++K+P
Sbjct:   108 RKAKKDPNAPKRALSSYMFFAKEKRVEIIAENPEIAKDVAAIGKMIGAAWNALSDEEKKP 287

Query:   143 YEKKAAKLKEKYEKDIAAY 161
             YE+ + + + +YE++ A Y
Sbjct:   288 YERMSDEDRVRYEREKAEY 344

 Score = 130 (45.8 bits), Expect = 3.8e-07, P = 3.8e-07
 Identities = 27/80 (33%), Positives = 41/80 (51%), Frame = +3

Query:     2 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 61
             K DP  P+  +SSY FF +  R E   ++P+ + + +   K     W  +S +EK  +E 
Sbjct:   117 KKDPNAPKRALSSYMFFAKEKRVEIIAENPEIAKDVAAIGKMIGAAWNALSDEEKKPYER 296

Query:    62 MAKADKARYEREMKTYIPPK 81
             M+  D+ RYERE   Y   K
Sbjct:   297 MSDEDRVRYEREKAEYAQRK 356


>D86076 Xenopus laevis oocyte mRNA for DNA-binding protein, complete cds.
        Length = 1575

  Plus Strand HSPs:

 Score = 155 (54.6 bits), Expect = 5.5e-09, P = 5.5e-09
 Identities = 54/193 (27%), Positives = 95/193 (49%), Frame = +2

Query:    16 AFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARYEREMK 75
             AF V +  E  K       ++ +E SK+  +RWK ++  EK  F  + +A++ R  + M 
Sbjct:   248 AFMVWSKIERRKIMEQSPDMHNAEISKRLGKRWKMLNDSEKIPF--IEEAERLRL-KHMA 418

Query:    76 TYIPPKGETKKKFK-DPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNN 134
              Y   K   +KK K DP+A  +PP+       E  PK +      S G    KL    + 
Sbjct:   419 DYPDYKYRPRKKPKVDPSASSKPPA--LTQSPEKSPKSR------SAGRKCPKLKPSHSG 574

Query:   135 TAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEE 194
             + +      + + +   ++Y     + +A GK  AA    V  ++ ++++EEEED+E+EE
Sbjct:   575 SGSKSLS-IKSEYSGGSDEYV--FGSPKASGKAAAAAVKCVFMDEDEEEEEEEEDDEEEE 745

Query:   195 DEEEEEDEEDEDEE 208
             DE +   +++ED+E
Sbjct:   746 DELQIRIKQEEDDE 787

 Score = 118 (41.5 bits), Expect = 0.00095, P = 0.00095
 Identities = 27/69 (39%), Positives = 39/69 (56%), Frame = +2

Query:   146 KAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDE 205
             K+  +K +Y      Y   G P A+ K    A K     E+EE+EE+EED+EEEEDE   
Sbjct:   584 KSLSIKSEYSGGSDEY-VFGSPKASGKAAAAAVKCVFMDEDEEEEEEEEDDEEEEDELQI 760

Query:   206 DEEEDDDDE 214
               ++++DDE
Sbjct:   761 RIKQEEDDE 787

 Score = 103 (36.3 bits), Expect = 0.053, P = 0.052
 Identities = 23/75 (30%), Positives = 41/75 (54%), Frame = +2

Query:    95 KRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKY 154
             KRP +AF ++    R KI  + P +   +++K+LG+ W      +K P+ ++A +L+ K+
Sbjct:   233 KRPMNAFMVWSKIERRKIMEQSPDMHNAEISKRLGKRWKMLNDSEKIPFIEEAERLRLKH 412

Query:   155 EKDIA--AYRAKGKP 167
               D     YR + KP
Sbjct:   413 MADYPDYKYRPRKKP 457


>D83650 Xenopus laevis mRNA for XLS13A protein, complete cds.
        Length = 1581

  Plus Strand HSPs:

 Score = 155 (54.6 bits), Expect = 5.5e-09, P = 5.5e-09
 Identities = 54/193 (27%), Positives = 95/193 (49%), Frame = +2

Query:    16 AFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARYEREMK 75
             AF V +  E  K       ++ +E SK+  +RWK ++  EK  F  + +A++ R  + M 
Sbjct:   272 AFMVWSKIERRKIMEQSPDMHNAEISKRLGKRWKMLNDSEKIPF--IREAERLRL-KHMA 442

Query:    76 TYIPPKGETKKKFK-DPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNN 134
              Y   K   +KK K DP+A  +PP+       E  PK +      S G    KL    + 
Sbjct:   443 DYPDYKYRPRKKPKVDPSASSKPPA--LTQSPEKSPKSR------SAGRKCPKLKPSHSG 598

Query:   135 TAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEE 194
             + +      + + +   ++Y     + +A GK  AA    V  ++ ++++EEEED+E+EE
Sbjct:   599 SGSKSLS-IKSEYSGGSDEYV--FGSPKASGKAAAAAVKCVFMDEDEEEEEEEEDDEEEE 769

Query:   195 DEEEEEDEEDEDEE 208
             DE +   +++ED+E
Sbjct:   770 DELQIRIKQEEDDE 811

 Score = 118 (41.5 bits), Expect = 0.00095, P = 0.00095
 Identities = 27/69 (39%), Positives = 39/69 (56%), Frame = +2

Query:   146 KAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDE 205
             K+  +K +Y      Y   G P A+ K    A K     E+EE+EE+EED+EEEEDE   
Sbjct:   608 KSLSIKSEYSGGSDEY-VFGSPKASGKAAAAAVKCVFMDEDEEEEEEEEDDEEEEDELQI 784

Query:   206 DEEEDDDDE 214
               ++++DDE
Sbjct:   785 RIKQEEDDE 811

 Score = 104 (36.6 bits), Expect = 0.041, P = 0.040
 Identities = 23/75 (30%), Positives = 41/75 (54%), Frame = +2

Query:    95 KRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKY 154
             KRP +AF ++    R KI  + P +   +++K+LG+ W      +K P+ ++A +L+ K+
Sbjct:   257 KRPMNAFMVWSKIERRKIMEQSPDMHNAEISKRLGKRWKMLNDSEKIPFIREAERLRLKH 436

Query:   155 EKDIA--AYRAKGKP 167
               D     YR + KP
Sbjct:   437 MADYPDYKYRPRKKP 481


>Y14075 Arabidopsis thaliana mRNA for HMG delta protein
        Length = 539

  Plus Strand HSPs:

 Score = 144 (50.7 bits), Expect = 8.3e-09, P = 8.3e-09
 Identities = 26/77 (33%), Positives = 43/77 (55%), Frame = +1

Query:    86 KKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHP-GLSIGDVAKKLGEMWNNTAADDKQPYE 144
             KK KDPN PK+PPS FF+F  ++R +    +P   S+G+V +  G+ W     +++ P+ 
Sbjct:    76 KKTKDPNRPKKPPSPFFVFLDDFRKEFNLANPDNKSVGNVGRAAGKKWKTMTEEERAPFV 255

Query:   145 KKAAKLKEKYEKDIAAY 161
              K+   K +Y   +  Y
Sbjct:   256 AKSQSKKTEYAVTMQQY 306

 Score = 95 (33.4 bits), Expect = 0.16, P = 0.15
 Identities = 19/74 (25%), Positives = 37/74 (50%), Frame = +1

Query:     4 DPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMA 63
             DP +P+   S +  F+   R+E    +PD + +     +   ++WKTM+ +E+  F   +
Sbjct:    88 DPNRPKKPPSPFFVFLDDFRKEFNLANPD-NKSVGNVGRAAGKKWKTMTEEERAPFVAKS 264

Query:    64 KADKARYEREMKTY 77
             ++ K  Y   M+ Y
Sbjct:   265 QSKKTEYAVTMQQY 306


>Z29356 Gallus domesticus of h71t7 gene encoding G.domesticus expressed
        sequence
        Length = 237

  Plus Strand HSPs:

 Score = 147 (51.7 bits), Expect = 9.2e-09, P = 9.2e-09
 Identities = 26/27 (96%), Positives = 27/27 (100%), Frame = +3

Query:     1 GKGDPKKPRGKMSSYAFFVQTCREEHK 27
             GKGDPKKPRGKMSSYAFFVQTCR+EHK
Sbjct:   156 GKGDPKKPRGKMSSYAFFVQTCRQEHK 236


>E08995 DNA encoding a protein involved in Leucocytozoon phylaxis.
        Length = 1686

  Plus Strand HSPs:

 Score = 154 (54.2 bits), Expect = 1.2e-08, P = 1.2e-08
 Identities = 28/77 (36%), Positives = 57/77 (74%), Frame = +1

Query:   138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197
             ++K+  E++  + +E+ E++I   + + + +  ++   + E+ ++++EEEE+EE+EE+EE
Sbjct:   118 NEKEEQEEEEQE-QEEQEQEIVEEQEQDEEEQEEEDEEEEEEKEEEEEEEEEEEEEEEEE 294

Query:   198 EEEDEEDEDEEEDDDDE 214
             EE+DEE+E+EEE D+DE
Sbjct:   295 EEQDEEEEEEEEQDEDE 345

 Score = 152 (53.5 bits), Expect = 2.8e-08, P = 2.8e-08
 Identities = 29/78 (37%), Positives = 55/78 (70%), Frame = +1

Query:   138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEE-DEEDE 196
             +++Q  E++  ++ E+ E+D      + + +  +K   + E+ ++++EEEE+EE DEE+E
Sbjct:   139 EEEQEQEEQEQEIVEEQEQDEEEQEEEDEEEEEEKEEEEEEEEEEEEEEEEEEEQDEEEE 318

Query:   197 EEEEDEEDEDEEEDDDDE 214
             EEEE +EDE+EEED+++E
Sbjct:   319 EEEEQDEDEEEEEDEEEE 372

 Score = 131 (46.1 bits), Expect = 2.6e-05, P = 2.6e-05
 Identities = 27/78 (34%), Positives = 53/78 (67%), Frame = +1

Query:   139 DKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDE--EDE 196
             +++  E++    +E+ E+D      K + +  ++   + E+ +++++EEE+EE+E  EDE
Sbjct:   166 EQEIVEEQEQDEEEQEEEDEEEEEEKEEEEEEEEEEEEEEEEEEEQDEEEEEEEEQDEDE 345

Query:   197 EEEEDEEDEDEEEDDDDE 214
             EEEEDEE+E+EEE +++E
Sbjct:   346 EEEEDEEEEEEEEQNEEE 399

 Score = 130 (45.8 bits), Expect = 3.4e-05, P = 3.4e-05
 Identities = 23/63 (36%), Positives = 48/63 (76%), Frame = +1

Query:   152 EKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDD 211
             E+ EK+      + + +  ++ +V+ ++  ++++EEEDEE+EE++EEEE+EE+E+EEE++
Sbjct:   112 EENEKE-EQEEEEQEQEEQEQEIVEEQEQDEEEQEEEDEEEEEEKEEEEEEEEEEEEEEE 288

Query:   212 DDE 214
             ++E
Sbjct:   289 EEE 297

 Score = 127 (44.7 bits), Expect = 8.0e-05, P = 8.0e-05
 Identities = 24/77 (31%), Positives = 53/77 (68%), Frame = +1

Query:   138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197
             D+++  E+   + +EK E++      + + +  ++   + E+ ++++E++EDEE+EEDEE
Sbjct:   196 DEEEQEEEDEEEEEEKEEEEEEEEEEEEEEEEEEE---QDEEEEEEEEQDEDEEEEEDEE 366

Query:   198 EEEDEEDEDEEEDDDDE 214
             EEE+EE  +EE+++D++
Sbjct:   367 EEEEEEQNEEEQNEDEQ 417

 Score = 120 (42.2 bits), Expect = 0.00056, P = 0.00056
 Identities = 21/77 (27%), Positives = 49/77 (63%), Frame = +1

Query:   138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197
             D+++  E++  + +E+ E +      +   +   +     ++  +++EEEE+EE +E +E
Sbjct:   304 DEEEEEEEEQDEDEEEEEDEEEEEEEEQNEEEQNEDEQNEDEQNEEEEEEEEEEQQEQDE 483

Query:   198 EEEDEEDEDEEEDDDDE 214
             EE+DEE++DEEE+++++
Sbjct:   484 EEQDEEEQDEEEEEEEQ 534

 Score = 117 (41.2 bits), Expect = 0.0013, P = 0.0013
 Identities = 20/77 (25%), Positives = 49/77 (63%), Frame = +1

Query:   138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197
             ++++  E +  +  E+ E++      +   D   +     E+ ++++EE++++++EE +E
Sbjct:   319 EEEEQDEDEEEEEDEEEEEEEEQNEEEQNEDEQNEDEQNEEEEEEEEEEQQEQDEEEQDE 498

Query:   198 EEEDEEDEDEEEDDDDE 214
             EE+DEE+E+EE+++ DE
Sbjct:   499 EEQDEEEEEEEQEEQDE 549

 Score = 116 (40.8 bits), Expect = 0.0017, P = 0.0017
 Identities = 19/77 (24%), Positives = 53/77 (68%), Frame = +1

Query:   138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197
             +++Q  +++  + +E+ E++      + + +  +    + E+ ++++E++E +E+E+DEE
Sbjct:   322 EEEQDEDEEEEEDEEEEEEEEQNEEEQNEDEQNEDEQNEEEEEEEEEEQQEQDEEEQDEE 501

Query:   198 EEEDEEDEDEEEDDDDE 214
             E+++EE+E+E+E+ D+E
Sbjct:   502 EQDEEEEEEEQEEQDEE 552

 Score = 116 (40.8 bits), Expect = 0.0017, P = 0.0017
 Identities = 23/81 (28%), Positives = 54/81 (66%), Frame = +1

Query:   138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEE----EEDEEDE 193
             ++++  E++  + +E+ E+D      + + +  ++   + E+++ ++ E    EE+EE+E
Sbjct:   277 EEEEEEEEQDEEEEEEEEQDEDEEEEEDEEEEEEEEQNEEEQNEDEQNEDEQNEEEEEEE 456

Query:   194 EDEEEEEDEEDEDEEEDDDDE 214
             E+E++E+DEE++DEEE D++E
Sbjct:   457 EEEQQEQDEEEQDEEEQDEEE 519

 Score = 111 (39.1 bits), Expect = 0.0065, P = 0.0064
 Identities = 23/80 (28%), Positives = 50/80 (62%), Frame = +1

Query:   138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197
             +D++  E++    +E+ E +        + +  ++   + +  +++ EEE+DEE+EE+E+
Sbjct:   355 EDEEEEEEEEQNEEEQNEDEQNEDEQNEEEEEEEEEEQQEQDEEEQDEEEQDEEEEEEEQ 534

Query:   198 EEEDEEDED---EEEDDDDE 214
             EE+DEE E+   E+E++D+E
Sbjct:   535 EEQDEEQEEVYAEKENEDEE 594

 Score = 109 (38.4 bits), Expect = 0.011, P = 0.011
 Identities = 19/75 (25%), Positives = 49/75 (65%), Frame = +1

Query:   138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197
             +D++  E +  + +E+  ++      + + +  ++   + E+ +++++EEE +E+E+DEE
Sbjct:   337 EDEEEEEDEEEEEEEEQNEEEQNEDEQNEDEQNEEEEEEEEEEQQEQDEEEQDEEEQDEE 516

Query:   198 EEEDEEDEDEEEDDD 212
             EEE+E++E +EE ++
Sbjct:   517 EEEEEQEEQDEEQEE 561

 Score = 99 (34.8 bits), Expect = 6.7e-05, Sum P(2) = 6.7e-05
 Identities = 19/42 (45%), Positives = 32/42 (76%), Frame = +1

Query:   178 EKSKKKKEEEEDEEDEEDEE-----EEEDEEDEDEEEDDDDE 214
             E+ ++++EEE++E+DEE EE     E EDEE +++EE+ +DE
Sbjct:   502 EQDEEEEEEEQEEQDEEQEEVYAEKENEDEEKKEKEEEQEDE 627

 Score = 96 (33.8 bits), Expect = 0.00015, Sum P(2) = 0.00015
 Identities = 17/40 (42%), Positives = 33/40 (82%), Frame = +1

Query:   178 EKSKKKKEEEEDEEDEEDEEEEE---DEEDEDEEEDDDDE 214
             ++ ++ +EEEE+E++E+DEE+EE   ++E+EDEE+ + +E
Sbjct:   493 DEEEQDEEEEEEEQEEQDEEQEEVYAEKENEDEEKKEKEE 612

 Score = 90 (31.7 bits), Expect = 1.7, P = 0.82
 Identities = 23/80 (28%), Positives = 51/80 (63%), Frame = +1

Query:   138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKE--EEEDEEDEED 195
             +D+Q  E++  + +E+ E+D    + + + D  ++   + E+ ++++E   E++ EDEE 
Sbjct:   421 EDEQNEEEEEEEEEEQQEQD-EEEQDEEEQDEEEEEEEQEEQDEEQEEVYAEKENEDEEK 597

Query:   196 EEEEEDEEDED---EEEDDDD 213
             +E+EE++EDE    E+E D++
Sbjct:   598 KEKEEEQEDEKIYVEKEKDEE 660

 Score = 72 (25.3 bits), Expect = 4.6, Sum P(2) = 0.99
 Identities = 24/73 (32%), Positives = 39/73 (53%), Frame = +1

Query:   139 DKQPY-EKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197
             D++ Y EK+    KE  EK++     + K ++  K   K  K KK + EEE E + + E 
Sbjct:   652 DEEVYVEKEQEHFKE-LEKEVL----EEKVESEHKDDKKETKIKKHEVEEEREIEIKGES 816

Query:   198 EEEDEEDEDEEEDD 211
             EE DE+  + +E +
Sbjct:   817 EEIDEKKSEVKEQN 858

 Score = 71 (25.0 bits), Expect = 6.7e-05, Sum P(2) = 6.7e-05
 Identities = 33/134 (24%), Positives = 56/134 (41%), Frame = +2

Query:    54 KEKGKFEDMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIK 113
             K+K K + M K +K +  +  K       + KK  K+ N  K+      +   + + K K
Sbjct:    95 KKKKKMKKMKKKNKKKKNKNKKN------KNKKS*KNKNKMKKNKKRK-MKKKKKKKKKK 253

Query:   114 GEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKG 173
              +          KK  +M       +K   +KK  K+K+K +K     + K K +  K  
Sbjct:   254 KKKKKKKKKKKKKKKSKMKKKKKKKNKMKMKKKK-KMKKKKKKKNKMKKNKMKMNKMKMN 430

Query:   174 VVKAEKSKKKKEEE 187
              +K +K KKKK  +
Sbjct:   431 KMKKKKKKKKKNNK 472

 Score = 54 (19.0 bits), Expect = 4.6, Sum P(2) = 0.99
 Identities = 19/84 (22%), Positives = 35/84 (41%), Frame = +2

Query:     6 KKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKA 65
             K  + KM      +   +++ KKK  +   N ++  K   ++ K    K+K +   M   
Sbjct:   386 KMKKNKMKMNKMKMNKMKKKKKKKKKN---NKNKMKKNKMKKNKMKKKKKKNRKNKMKNK 556

Query:    66 DKARYEREMKTYIPPKGETKKKFK 89
              K   +++MK     K +  KK K
Sbjct:   557 KKYMLKKKMKMKKKKKKKKNKKMK 628


>L22300 Chilo iridescent virus type 6 zinc finger protein and non-histone
        Length = 5702

  Plus Strand HSPs:

 Score = 143 (50.3 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
 Identities = 50/175 (28%), Positives = 80/175 (45%), Frame = +3

Query:     8 PRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADK 67
             P+   SSY FF Q  R     + PD   N  +      ++W  +  +++ K++ MA  D+
Sbjct:   927 PKRNKSSYLFFCQEIRPSIVAEMPDIKPN--QVMVHLGKKWSELPLEDRKKYDVMAVEDR 1100

Query:    68 ARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKK 127
              RY       +  K E  KK    N P +  S +  FC++ R KIK + P L+  D+  K
Sbjct:  1101 KRY-------LASK-EANKKL---NKPVKI-SGYLQFCADER-KIKLKFPDLTTKDITAK 1241

Query:   128 LGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAK-GKPDAAKKGVVKAEKSKK 182
             LG MWN+   ++ Q Y      LK KY  +I        K +  K+ ++ +   +K
Sbjct:  1242 LGGMWNDYKKNNPQ-Y------LKSKYGYEIVEQHYDYEKNEIDKENIIPSSHRRK 1388

 Score = 124 (43.7 bits), Expect = 5.9e-06, Sum P(2) = 5.9e-06
 Identities = 27/82 (32%), Positives = 41/82 (50%), Frame = +3

Query:    87 KFKD-PNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEK 145
             K KD  N PKR  S++  FC E RP I  E P +    V   LG+ W+    +D++ Y+ 
Sbjct:   903 KPKDVTNVPKRNKSSYLFFCQEIRPSIVAEMPDIKPNQVMVHLGKKWSELPLEDRKKYDV 1082

Query:   146 KAAKLKEKYEKDIAAYRAKGKP 167
              A + +++Y     A +   KP
Sbjct:  1083 MAVEDRKRYLASKEANKKLNKP 1148

 Score = 58 (20.4 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
 Identities = 14/40 (35%), Positives = 24/40 (60%), Frame = +1

Query:   171 KKGVVKAEKSKKKKEEEEDEEDEEDEE--EEEDEEDEDEE 208
             K  + K  K  +++ +EED + +      +EEDE++EDEE
Sbjct:  3712 KLAIRKY*KISRRRFQEEDFKKKISRRRFQEEDEDEEDEE 3831

 Score = 54 (19.0 bits), Expect = 3.5e-08, Sum P(2) = 3.5e-08
 Identities = 13/41 (31%), Positives = 24/41 (58%), Frame = +1

Query:   171 KKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDD 211
             K  + K  K  +++ +EED + +      + EEDEDEE+++
Sbjct:  3712 KLAIRKY*KISRRRFQEEDFKKKISRRRFQ-EEDEDEEDEE 3831

 Score = 47 (16.5 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
 Identities = 14/43 (32%), Positives = 24/43 (55%), Frame = +1

Query:   171 KKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDD 213
             K  + K  K  +++ +EED + +      + EEDEDEE  D++
Sbjct:  3712 KLAIRKY*KISRRRFQEEDFKKKISRRRFQ-EEDEDEE--DEE 3831

 Score = 44 (15.5 bits), Expect = 3.7e-07, Sum P(2) = 3.7e-07
 Identities = 15/44 (34%), Positives = 23/44 (52%), Frame = +1

Query:   171 KKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             K  + K  K  +++ +EED + +      + EEDEDEE    DE
Sbjct:  3712 KLAIRKY*KISRRRFQEEDFKKKISRRRFQ-EEDEDEE----DE 3828


>X53025 P.falciparum DNA for erythrocyte membrane-associated antigen (clone
        Length = 253

  Plus Strand HSPs:

 Score = 145 (51.0 bits), Expect = 1.4e-08, P = 1.4e-08
 Identities = 30/65 (46%), Positives = 39/65 (60%), Frame = +2

Query:    85 KKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS--IGDVAKKLGEMWNNTAADDKQP 142
             +KK KDP+APKR  SA+  F  E R +I  + P LS  +  V K +GE WN     +K P
Sbjct:    41 RKKKKDPHAPKRSLSAYMFFAKEKRAEIISKQPELSKDVATVGKMIGEAWNKLGEKEKAP 220

Query:   143 YEKKA 147
             +EKKA
Sbjct:   221 FEKKA 235

 Score = 111 (39.1 bits), Expect = 0.00011, P = 0.00011
 Identities = 23/65 (35%), Positives = 32/65 (49%), Frame = +2

Query:     2 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 61
             K DP  P+  +S+Y FF +  R E   K P+ S + +   K   E W  +  KEK  FE 
Sbjct:    50 KKDPHAPKRSLSAYMFFAKEKRAEIISKQPELSKDVATVGKMIGEAWNKLGEKEKAPFEK 229

Query:    62 MAKAD 66
              A+ D
Sbjct:   230 KAQED 244


>U05269 Brugia malayi high mobility group protein mRNA, partial cds.
        Length = 237

  Plus Strand HSPs:

 Score = 145 (51.0 bits), Expect = 1.5e-08, P = 1.5e-08
 Identities = 33/75 (44%), Positives = 44/75 (58%), Frame = +2

Query:    81 KGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDK 140
             K +  KK KDPNAPKR  SA+  +  E R +I    PG+S+ DV+K  G  W      DK
Sbjct:     5 KQKKTKKVKDPNAPKRAKSAYMFWLLENRSRIA--KPGMSVIDVSKAAGVEWGKVK--DK 172

Query:   141 QPYEKKAAKLKEKYE 155
               YEK A++ K++YE
Sbjct:   173 SKYEKMASQDKQRYE 217

 Score = 121 (42.6 bits), Expect = 7.7e-06, P = 7.7e-06
 Identities = 32/76 (42%), Positives = 40/76 (52%), Frame = +2

Query:    81 KGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNT----- 135
             K +  KK KDPNAPKR  SA+  +  E R +I    PG+S+ DV+K  G  W        
Sbjct:     5 KQKKTKKVKDPNAPKRAKSAYMFWLLENRSRIA--KPGMSVIDVSKAAGVEWGKVKDKSK 178

Query:   136 ----AADDKQPYEKKAAK 149
                 A+ DKQ YE K  K
Sbjct:   179 YEKMASQDKQRYEAKKKK 232

 Score = 93 (32.7 bits), Expect = 0.013, P = 0.013
 Identities = 26/72 (36%), Positives = 35/72 (48%), Frame = +2

Query:     4 DPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMA 63
             DP  P+   S+Y F++   R    K  P  SV   + SK     W  +  K+K K+E MA
Sbjct:    32 DPNAPKRAKSAYMFWLLENRSRIAK--PGMSV--IDVSKAAGVEWGKV--KDKSKYEKMA 193

Query:    64 KADKARYEREMK 75
               DK RYE + K
Sbjct:   194 SQDKQRYEAKKK 229


>M55020;M37081 Rat nucleolin gene.
            Length = 4204

  Plus Strand HSPs:

 Score = 154 (54.2 bits), Expect = 1.7e-08, P = 1.7e-08
 Identities = 32/52 (61%), Positives = 40/52 (76%), Frame = +1

Query:   163 AKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             AKGK   AK   VKA   K   EEEED+ED+EDEEE+EDEEDE+++ED+D+E
Sbjct:    37 AKGKKTPAKVVPVKA---KSVAEEEEDDEDDEDEEEDEDEEDEEDDEDEDEE 183

 Score = 143 (50.3 bits), Expect = 9.8e-07, P = 9.8e-07
 Identities = 28/50 (56%), Positives = 37/50 (74%), Frame = +1

Query:   167 PDAAKKGVVKAE--KSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             P   KK   K    K+K   EEEED+ED+EDEEE+EDEEDE+++ED+D+E
Sbjct:    34 PAKGKKTPAKVVPVKAKSVAEEEEDDEDDEDEEEDEDEEDEEDDEDEDEE 183

 Score = 142 (50.0 bits), Expect = 1.3e-06, P = 1.3e-06
 Identities = 29/55 (52%), Positives = 42/55 (76%), Frame = +1

Query:   163 AKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEE---DEEEEEDEEDEDEEEDDDDE 214
             AKGK   AK   VKA+   +++E++ED+EDEE   DEE+EED+EDEDEEE++ ++
Sbjct:    37 AKGKKTPAKVVPVKAKSVAEEEEDDEDDEDEEEDEDEEDEEDDEDEDEEEEEGNQ 201


>U53810 Toxoplasma gondii GAA trinucleotide repeat region BS.
        Length = 800

  Plus Strand HSPs:

 Score = 151 (53.2 bits), Expect = 1.7e-08, P = 1.7e-08
 Identities = 38/121 (31%), Positives = 71/121 (58%), Frame = +2

Query:   101 FFLFCSEY----RPKIKGEHPGLS-IGDVAKKLGEMWNNT--AADDKQPYEKKAAKLKEK 153
             FFL C  Y    RP +      LS    V+     + N    A D++Q  E++  + +E+
Sbjct:    50 FFLVCFTYFCETRPGMATATKALSGTSRVSPSEPRLLNFLLFAEDERQEEEEEEEEEEEE 229

Query:   154 YEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDD 213
              E++      + + +  ++   + E+ ++++EEEE+EE+EE+EEEEE+EE+E+EEE++++
Sbjct:   230 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 409

Query:   214 E 214
             E
Sbjct:   410 E 412

 Score = 137 (48.2 bits), Expect = 2.1e-06, P = 2.1e-06
 Identities = 24/77 (31%), Positives = 56/77 (72%), Frame = +2

Query:   138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197
             ++++  E++  + +E+ E++      + + +  ++   + E+ ++++EEEE+EE+EE+EE
Sbjct:   194 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 373

Query:   198 EEEDEEDEDEEEDDDDE 214
             EEE+EE+E+EEE++++E
Sbjct:   374 EEEEEEEEEEEEEEEEE 424

 Score = 137 (48.2 bits), Expect = 2.1e-06, P = 2.1e-06
 Identities = 24/77 (31%), Positives = 56/77 (72%), Frame = +2

Query:   138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197
             ++++  E++  + +E+ E++      + + +  ++   + E+ ++++EEEE+EE+EE+EE
Sbjct:   197 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 376

Query:   198 EEEDEEDEDEEEDDDDE 214
             EEE+EE+E+EEE++++E
Sbjct:   377 EEEEEEEEEEEEEEEEE 427

 Score = 137 (48.2 bits), Expect = 2.1e-06, P = 2.1e-06
 Identities = 24/77 (31%), Positives = 56/77 (72%), Frame = +2

Query:   138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197
             ++++  E++  + +E+ E++      + + +  ++   + E+ ++++EEEE+EE+EE+EE
Sbjct:   200 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 379

Query:   198 EEEDEEDEDEEEDDDDE 214
             EEE+EE+E+EEE++++E
Sbjct:   380 EEEEEEEEEEEEEEEEE 430

 Score = 134 (47.2 bits), Expect = 5.2e-06, P = 5.2e-06
 Identities = 24/77 (31%), Positives = 55/77 (71%), Frame = +2

Query:   138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197
             ++++  E++  + +E+ E++      + + +  ++   + E+ ++++EEEE+EE+EE+EE
Sbjct:   206 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 385

Query:   198 EEEDEEDEDEEEDDDDE 214
             EEE+EE+E+EEE+++ E
Sbjct:   386 EEEEEEEEEEEEEEEKE 436

 Score = 134 (47.2 bits), Expect = 5.2e-06, P = 5.2e-06
 Identities = 24/77 (31%), Positives = 55/77 (71%), Frame = +2

Query:   138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197
             ++++  E++  + +E+ E++      + + +  ++   + E+ ++++EEEE+EE+EE+EE
Sbjct:   209 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 388

Query:   198 EEEDEEDEDEEEDDDDE 214
             EEE+EE+E+EEE++ +E
Sbjct:   389 EEEEEEEEEEEEEEKEE 439

 Score = 134 (47.2 bits), Expect = 5.2e-06, P = 5.2e-06
 Identities = 24/77 (31%), Positives = 55/77 (71%), Frame = +2

Query:   138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197
             ++++  E++  + +E+ E++      + + +  ++   + E+ ++++EEEE+EE+EE+EE
Sbjct:   212 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 391

Query:   198 EEEDEEDEDEEEDDDDE 214
             EEE+EE+E+EEE+ ++E
Sbjct:   392 EEEEEEEEEEEEEKEEE 442

 Score = 134 (47.2 bits), Expect = 5.2e-06, P = 5.2e-06
 Identities = 24/77 (31%), Positives = 55/77 (71%), Frame = +2

Query:   138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197
             ++++  E++  + +E+ E++      + + +  ++   + E+ ++++EEEE+EE+EE+EE
Sbjct:   215 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 394

Query:   198 EEEDEEDEDEEEDDDDE 214
             EEE+EE+E+EEE +++E
Sbjct:   395 EEEEEEEEEEEEKEEEE 445

 Score = 134 (47.2 bits), Expect = 5.2e-06, P = 5.2e-06
 Identities = 24/77 (31%), Positives = 55/77 (71%), Frame = +2

Query:   138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197
             ++++  E++  + +E+ E++      + + +  ++   + E+ ++++EEEE+EE+EE+EE
Sbjct:   227 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 406

Query:   198 EEEDEEDEDEEEDDDDE 214
             EEE+EE+E EEE++++E
Sbjct:   407 EEEEEEEEKEEEEEEEE 457

 Score = 134 (47.2 bits), Expect = 5.2e-06, P = 5.2e-06
 Identities = 24/77 (31%), Positives = 55/77 (71%), Frame = +2

Query:   138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197
             ++++  E++  + +E+ E++      + + +  ++   + E+ ++++EEEE+EE+EE+EE
Sbjct:   233 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 412

Query:   198 EEEDEEDEDEEEDDDDE 214
             EEE+EE E+EEE++++E
Sbjct:   413 EEEEEEKEEEEEEEEEE 463

 Score = 133 (46.8 bits), Expect = 6.9e-06, P = 6.9e-06
 Identities = 23/77 (29%), Positives = 56/77 (72%), Frame = +2

Query:   138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197
             ++++  E++  + +E+ E++      + + +  ++   + E+ ++++EEEE+EE+EE+EE
Sbjct:   203 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 382

Query:   198 EEEDEEDEDEEEDDDDE 214
             EEE+EE+E+EEE+++++
Sbjct:   383 EEEEEEEEEEEEEEEEK 433

 Score = 133 (46.8 bits), Expect = 6.9e-06, P = 6.9e-06
 Identities = 23/77 (29%), Positives = 56/77 (72%), Frame = +2

Query:   138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197
             ++++  E++  + +E+ E++      + + +  ++   + E+ ++++EEEE+EE+EE+EE
Sbjct:   218 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 397

Query:   198 EEEDEEDEDEEEDDDDE 214
             EEE+EE+E+EE+++++E
Sbjct:   398 EEEEEEEEEEEKEEEEE 448

 Score = 133 (46.8 bits), Expect = 6.9e-06, P = 6.9e-06
 Identities = 23/77 (29%), Positives = 56/77 (72%), Frame = +2

Query:   138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197
             ++++  E++  + +E+ E++      + + +  ++   + E+ ++++EEEE+EE+EE+EE
Sbjct:   221 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 400

Query:   198 EEEDEEDEDEEEDDDDE 214
             EEE+EE+E+E+E++++E
Sbjct:   401 EEEEEEEEEEKEEEEEE 451

 Score = 133 (46.8 bits), Expect = 6.9e-06, P = 6.9e-06
 Identities = 23/77 (29%), Positives = 56/77 (72%), Frame = +2

Query:   138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197
             ++++  E++  + +E+ E++      + + +  ++   + E+ ++++EEEE+EE+EE+EE
Sbjct:   224 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 403

Query:   198 EEEDEEDEDEEEDDDDE 214
             EEE+EE+E++EE++++E
Sbjct:   404 EEEEEEEEEKEEEEEEE 454

 Score = 133 (46.8 bits), Expect = 6.9e-06, P = 6.9e-06
 Identities = 23/77 (29%), Positives = 56/77 (72%), Frame = +2

Query:   138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197
             ++++  E++  + +E+ E++      + + +  ++   + E+ ++++EEEE+EE+EE+EE
Sbjct:   230 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 409

Query:   198 EEEDEEDEDEEEDDDDE 214
             EEE+EE+++EEE++++E
Sbjct:   410 EEEEEEEKEEEEEEEEE 460

 Score = 133 (46.8 bits), Expect = 6.9e-06, P = 6.9e-06
 Identities = 23/77 (29%), Positives = 56/77 (72%), Frame = +2

Query:   138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197
             ++++  E++  + +E+ E++      + + +  ++   + E+ ++++EEEE+EE+EE+EE
Sbjct:   236 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 415

Query:   198 EEEDEEDEDEEEDDDDE 214
             EEE+E++E+EEE++++E
Sbjct:   416 EEEEEKEEEEEEEEEEE 466

 Score = 133 (46.8 bits), Expect = 6.9e-06, P = 6.9e-06
 Identities = 23/77 (29%), Positives = 56/77 (72%), Frame = +2

Query:   138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197
             ++++  E++  + +E+ E++      + + +  ++   + E+ ++++EEEE+EE+EE+EE
Sbjct:   239 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 418

Query:   198 EEEDEEDEDEEEDDDDE 214
             EEE++E+E+EEE++++E
Sbjct:   419 EEEEKEEEEEEEEEEEE 469

 Score = 130 (45.8 bits), Expect = 1.7e-05, P = 1.7e-05
 Identities = 23/77 (29%), Positives = 55/77 (71%), Frame = +2

Query:   138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197
             ++++  E++  + +E+ E++      + + +  ++   + E+ ++++EEEE+EE+EE+EE
Sbjct:   242 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 421

Query:   198 EEEDEEDEDEEEDDDDE 214
             EEE EE+E+EEE+++++
Sbjct:   422 EEEKEEEEEEEEEEEEK 472

 Score = 130 (45.8 bits), Expect = 1.7e-05, P = 1.7e-05
 Identities = 23/77 (29%), Positives = 55/77 (71%), Frame = +2

Query:   138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197
             ++++  E++  + +E+ E++      + + +  ++   + E+ ++++EEEE+EE+EE+EE
Sbjct:   245 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 424

Query:   198 EEEDEEDEDEEEDDDDE 214
             EE++EE+E+EEE+++ E
Sbjct:   425 EEKEEEEEEEEEEEEKE 475


>X73481 D.hydei Dhmst101 (2) gene
        Length = 4859

  Plus Strand HSPs:

 Score = 154 (54.2 bits), Expect = 1.7e-08, P = 1.7e-08
 Identities = 67/207 (32%), Positives = 99/207 (47%), Frame = +1

Query:     1 GKGDPK-KPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMS-AKEKGK 58
             GKG  K K  GK S  A   + C E  KK+   A+       KKC ER K    A EK +
Sbjct:  2977 GKGKKKCKKLGKKSKRAAEKKKCAEAAKKEKEAAT------KKKCEERAKKQKEAAEKKQ 3138

Query:    59 FEDMAKADKARYEREM--KTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEH 116
              E+ AK  K   E++   +     K   +KK  +  A K   +A    C E   K+K   
Sbjct:  3139 CEERAKKLKEAAEQKQCEERAKKLKEAAEKKQCEERAKKLKEAAEQKQCEERAKKLKEAA 3318

Query:   117 PGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVK 176
                   + AKK  E     AA+ KQ  E++A KLKE  EK     RAK + +AA+K   +
Sbjct:  3319 EKKQCEERAKKEKE-----AAEKKQ-CEERAKKLKEAAEKKQCEERAKKEKEAAEKKRCE 3480

Query:   177 AEKSKKKKEEEEDEEDEEDEEEEEDEEDEDE 207
              E +K++KE  E ++  E  ++E++  ++ +
Sbjct:  3481 -EAAKREKEAAEKKKCAEAAKKEKEATEKQK 3570

 Score = 150 (52.8 bits), Expect = 9.0e-08, P = 9.0e-08
 Identities = 65/184 (35%), Positives = 92/184 (50%), Frame = +1

Query:    27 KKKHPDASVNFSEFS--KKCSERWKTMS-AKEKGKFEDMAKADKARYER----EMKTYIP 79
             KKK  +A+    E +  KKC E  K +  A EK K ++ AK +K   ER    E+   I 
Sbjct:  1327 KKKCEEAAKKEKEAAERKKCEELAKNIKKAAEKKKCKEAAKKEKEAAERKKCEELAKKIK 1506

Query:    80 PKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADD 139
                E KKK ++  A K    A    C E   KIK       I    KKL +    TA  +
Sbjct:  1507 KAAE-KKKCEE-TAKKGKEVAERKKCEELAKKIKKAE----IKKKCKKLAKKEKETA--E 1662

Query:   140 KQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKS-KKKKEEEEDEEDEEDEEE 198
             K+  EK A K KE  EK      AK + +AA+K   K EKS KK+KE  E ++ E+  +E
Sbjct:  1663 KKKCEKAAKKRKEAAEKKKCEKAAKKRKEAAEKK--KCEKSAKKRKEAAEKKKCEKAAKE 1836

Query:   199 EEDEEDEDEEED 210
              ++  ++ + E+
Sbjct:  1837 RKEAAEKKKCEE 1872

 Score = 145 (51.0 bits), Expect = 5.2e-07, P = 5.2e-07
 Identities = 57/169 (33%), Positives = 84/169 (49%), Frame = +1

Query:    42 KKCSERWKTMSAKEKGKFEDMAKADKARYEREM--KTYIPPKGETKKKFKDPNAPKRPPS 99
             KKC E  K  +A EK K ++ AK +K   E++   KT    K E +KK  +  A KR  +
Sbjct:  2386 KKCRELAKKKAA-EKKKCKEAAKKEKEAAEKKKCEKTAKKRKEEAEKKKCEKTAKKRKEA 2562

Query:   100 AFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIA 159
             A    C +   K K E         AKK  E    TA  +K+  EK A K K+  EK   
Sbjct:  2563 AEKKKCEKAAKKRKEEAEKKKCEKTAKKRKE----TA--EKKKCEKAAKKRKQAAEKKKC 2724

Query:   160 AYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEED 210
                AK + +AA+K    AE +KK+KE  E ++ EE  ++E++  +  + E+
Sbjct:  2725 EKAAKKRKEAAEKKKC-AEAAKKEKELAEKKKCEEAAKKEKEVAERKKCEE 2874

 Score = 143 (50.3 bits), Expect = 1.0e-06, P = 1.0e-06
 Identities = 55/169 (32%), Positives = 87/169 (51%), Frame = +1

Query:    42 KKCSERWK-TMSAKEKGKFEDMAKADK-ARYEREMKTYIPPKGET-KKKFKDPNAPKRPP 98
             KKC +  K +  A EK K  + AK +K A  +++ +     + E  +KK  +  A K   
Sbjct:  2989 KKCKKLGKKSKRAAEKKKCAEAAKKEKEAATKKKCEERAKKQKEAAEKKQCEERAKKLKE 3168

Query:    99 SAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDI 158
             +A    C E   K+K         + AKKL E     AA+ KQ  E++A KLKE  EK  
Sbjct:  3169 AAEQKQCEERAKKLKEAAEKKQCEERAKKLKE-----AAEQKQ-CEERAKKLKEAAEKKQ 3330

Query:   159 AAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEED 210
                RAK + +AA+K   + E++KK KE  E ++ EE  ++E++  ++   E+
Sbjct:  3331 CEERAKKEKEAAEKKQCE-ERAKKLKEAAEKKQCEERAKKEKEAAEKKRCEE 3483

 Score = 139 (48.9 bits), Expect = 3.3e-06, P = 3.3e-06
 Identities = 64/200 (32%), Positives = 92/200 (46%), Frame = +1

Query:     6 KKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFS--KKCSERWKTMS-AKEKGKFEDM 62
             K  +GK        ++ R   KKK  +A+    E +  KKC ER K    A EK + E+ 
Sbjct:  2971 KAGKGKKKCKKLGKKSKRAAEKKKCAEAAKKEKEAATKKKCEERAKKQKEAAEKKQCEER 3150

Query:    63 AKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIG 122
             AK  K +   E K       E  KK K+    K+        C E   K+K         
Sbjct:  3151 AK--KLKEAAEQKQC----EERAKKLKEAAEKKQ--------CEERAKKLKEAAEQKQCE 3288

Query:   123 DVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKK 182
             + AKKL E     AA+ KQ  E++A K KE  EK     RAK   +AA+K   + E++KK
Sbjct:  3289 ERAKKLKE-----AAEKKQ-CEERAKKEKEAAEKKQCEERAKKLKEAAEKKQCE-ERAKK 3447

Query:   183 KKEEEEDEEDEEDEEEEEDEEDE 205
             +KE  E +  EE  + E++  ++
Sbjct:  3448 EKEAAEKKRCEEAAKREKEAAEK 3516

 Score = 134 (47.2 bits), Expect = 1.5e-05, P = 1.5e-05
 Identities = 64/182 (35%), Positives = 91/182 (50%), Frame = +1

Query:    27 KKKHPDASVNFSEFS--KKCSERWKTMS-AKEKGKFEDMAKADKARYEREMKTYIPPK-G 82
             KKK  +A+    E +  KKC E  K +  A EK K + +AK +K   E   K  +  K G
Sbjct:  2809 KKKCEEAAKKEKEVAERKKCEELAKKIKKAAEKKKCKKLAKKEKKAGE---KNKLKKKAG 2979

Query:    83 ETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQP 142
             + KKK K     K   +A    C+E   K K         + AKK  E     AA+ KQ 
Sbjct:  2980 KGKKKCKKLGK-KSKRAAEKKKCAEAAKKEKEAATKKKCEERAKKQKE-----AAEKKQ- 3138

Query:   143 YEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEE--EE 200
              E++A KLKE  E+     RAK   +AA+K   + E++KK KE  E ++ EE  ++  E 
Sbjct:  3139 CEERAKKLKEAAEQKQCEERAKKLKEAAEKKQCE-ERAKKLKEAAEQKQCEERAKKLKEA 3315

Query:   201 DEEDEDEE 208
              E+ + EE
Sbjct:  3316 AEKKQCEE 3339

 Score = 133 (46.8 bits), Expect = 1.9e-05, P = 1.9e-05
 Identities = 62/171 (36%), Positives = 82/171 (47%), Frame = +1

Query:    24 EEHKKKHPDASVNFSEFSKKCSERWKTMS-AKEKGKFEDMAKADKARYER----EMKTYI 78
             E+  KK  +A+       KKC +  K    A EK K E+ AK +K   ER    E+   I
Sbjct:  1771 EKSAKKRKEAAEK-----KKCEKAAKERKEAAEKKKCEEAAKKEKEVAERKKCEELAKKI 1935

Query:    79 PPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAAD 138
                 E KKK K+  A K   +A    C E   KIK          +AKK  E    TA  
Sbjct:  1936 KKAAE-KKKCKEA-AKKEKEAAEREKCGELAKKIKKAAEKKKCKKLAKKEKE----TA-- 2091

Query:   139 DKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEE 194
             +K+  EK A K KE  EK   A  AK + +AA+K   + E +KK+KE  E ++ EE
Sbjct:  2092 EKKKCEKAAKKRKEAAEKKKCAEAAKKEKEAAEKKKCE-EAAKKEKEAAERKKCEE 2256

 Score = 130 (45.8 bits), Expect = 4.5e-05, P = 4.5e-05
 Identities = 56/167 (33%), Positives = 85/167 (50%), Frame = +1

Query:    42 KKCSER--WKTMSAKEKGKFEDMAKADKARYEREMKTYIPPKGE---TKKKFKDPNAPKR 96
             KK  E+   K  + K K K + + K  K   E++       K +   TKKK ++  A K+
Sbjct:  2938 KKAGEKNKLKKKAGKGKKKCKKLGKKSKRAAEKKKCAEAAKKEKEAATKKKCEE-RAKKQ 3114

Query:    97 PPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEK 156
               +A    C E   K+K         + AKKL E     AA+ KQ  E++A KLKE  E+
Sbjct:  3115 KEAAEKKQCEERAKKLKEAAEQKQCEERAKKLKE-----AAEKKQ-CEERAKKLKEAAEQ 3276

Query:   157 DIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEE--EEDEEDEDEE 208
                  RAK   +AA+K   + E++KK+KE  E ++ EE  ++  E  E+ + EE
Sbjct:  3277 KQCEERAKKLKEAAEKKQCE-ERAKKEKEAAEKKQCEERAKKLKEAAEKKQCEE 3435

 Score = 129 (45.4 bits), Expect = 6.0e-05, P = 6.0e-05
 Identities = 63/198 (31%), Positives = 87/198 (43%), Frame = +1

Query:    27 KKKHPDASVNFSEFS--KKCSERWKTMS-AKEKGKFEDMAKADKARYER----EMKTYIP 79
             KKK  +A+    E +  KKC E  K +  A EK K ++ AK +K   ER    E+   I 
Sbjct:  1327 KKKCEEAAKKEKEAAERKKCEELAKNIKKAAEKKKCKEAAKKEKEAAERKKCEELAKKIK 1506

Query:    80 PKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAAD- 138
                E KKK ++  A K    A    C E   KIK          +AKK  E       + 
Sbjct:  1507 KAAE-KKKCEE-TAKKGKEVAERKKCEELAKKIKKAEIKKKCKKLAKKEKETAEKKKCEK 1680

Query:   139 ---------DKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAA-KKGVVKAEKSKKKKEEEE 188
                      +K+  EK A K KE  EK      AK + +AA KK   KA K +K+  E++
Sbjct:  1681 AAKKRKEAAEKKKCEKAAKKRKEAAEKKKCEKSAKKRKEAAEKKKCEKAAKERKEAAEKK 1860

Query:   189 DEEDEEDEEEEEDEEDEDEE 208
               E+   +E+E  E  + EE
Sbjct:  1861 KCEEAAKKEKEVAERKKCEE 1920

 Score = 126 (44.4 bits), Expect = 0.00014, P = 0.00014
 Identities = 65/195 (33%), Positives = 90/195 (46%), Frame = +1

Query:     9 RGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKT-MSAKEKGKFEDMAKADK 67
             R K    A   + C EE  KK  +A+       K+C ER K    A EK + E+ AK +K
Sbjct:  3340 RAKKEKEAAEKKQC-EERAKKLKEAAEK-----KQCEERAKKEKEAAEKKRCEEAAKREK 3501

Query:    68 ARYEREMKTYIPPKG-ETKKKFKDPNAPKRPPSAFFLF-CSEYRPKIKGEHPGLSIGDVA 125
                E++       K  E  +K K   A K+   A     C+E   + K         D+A
Sbjct:  3502 EAAEKKKCAEAAKKEKEATEKQKCAEAAKKEKEAAEKKKCAEAAKREKEAAQKKKCADLA 3681

Query:   126 KKL---GEM--WNNTAADDKQPYEK----KAAKL-KEKYEKDIAAYRAKGKPDAAKKGVV 175
             KK     EM      A  +K+  EK    KAAK  KE  EK   A  AK + +AA+K   
Sbjct:  3682 KKEQEPAEMKKCEEAAKKEKEAAEKQKCAKAAKKEKEAAEKKKCAEAAKKEQEAAEKKKC 3861

Query:   176 KAEKSKKKKEEEEDEEDEEDEE 197
              AE +KK+KE E+  + E+ E+
Sbjct:  3862 -AEAAKKEKEAEKKRKCEKAEK 3924

 Score = 126 (44.4 bits), Expect = 0.00014, P = 0.00014
 Identities = 61/195 (31%), Positives = 90/195 (46%), Frame = +1

Query:     9 RGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKT-MSAKEKGKFEDMAKADK 67
             R K    A   + C EE  KK  +A+       K+C ER K    A EK + E+ AK +K
Sbjct:  3340 RAKKEKEAAEKKQC-EERAKKLKEAAEK-----KQCEERAKKEKEAAEKKRCEEAAKREK 3501

Query:    68 ARYEREMKTYIPPKG-ETKKKFKDPNAPKRPPSAFFLF-CSEYRPKIKGEHPGLSIGDVA 125
                E++       K  E  +K K   A K+   A     C+E   + K         D+A
Sbjct:  3502 EAAEKKKCAEAAKKEKEATEKQKCAEAAKKEKEAAEKKKCAEAAKREKEAAQKKKCADLA 3681

Query:   126 KKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKE 185
             KK  E      A+ K+  E+ A K KE  EK   A  AK + +AA+K    AE +KK++E
Sbjct:  3682 KKEQE-----PAEMKK-CEEAAKKEKEAAEKQKCAKAAKKEKEAAEKKKC-AEAAKKEQE 3840

Query:   186 EEEDEEDEEDEEEEEDEE 203
               E ++  E  ++E++ E
Sbjct:  3841 AAEKKKCAEAAKKEKEAE 3894

 Score = 126 (44.4 bits), Expect = 0.00014, P = 0.00014
 Identities = 58/199 (29%), Positives = 92/199 (46%), Frame = +1

Query:     9 RGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMS-AKEKGKFEDMAKADK 67
             R K    A   + C EE  KK  +A+       K+C ER K +  A EK + E+ AK +K
Sbjct:  3196 RAKKLKEAAEKKQC-EERAKKLKEAAEQ-----KQCEERAKKLKEAAEKKQCEERAKKEK 3357

Query:    68 ARYEREM--KTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVA 125
                E++   +     K   +KK  +  A K   +A    C E   + K         + A
Sbjct:  3358 EAAEKKQCEERAKKLKEAAEKKQCEERAKKEKEAAEKKRCEEAAKREKEAAEKKKCAEAA 3537

Query:   126 KKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKE 185
             KK  E      A +KQ   + A K KE  EK   A  AK + +AA+K    A+ +KK++E
Sbjct:  3538 KKEKE------ATEKQKCAEAAKKEKEAAEKKKCAEAAKREKEAAQKKKC-ADLAKKEQE 3696

Query:   186 EEEDEEDEEDEEEEEDEEDEDE 207
               E ++ EE  ++E++  ++ +
Sbjct:  3697 PAEMKKCEEAAKKEKEAAEKQK 3762

 Score = 121 (42.6 bits), Expect = 0.00054, P = 0.00054
 Identities = 56/184 (30%), Positives = 87/184 (47%), Frame = +1

Query:    27 KKKHPDASVNFSEFS--KKCSERWKTMS-AKEKGKFEDMAKADKARYEREMKTYIPPKGE 83
             KKK   A+    E +  KKC +  K    A EK K E  AK  K   E++       K +
Sbjct:  1711 KKKCEKAAKKRKEAAEKKKCEKSAKKRKEAAEKKKCEKAAKERKEAAEKKKCEEAAKKEK 1890

Query:    84 --TKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQ 141
                ++K  +  A K   +A    C E   K K        G++AKK+ +      A +K+
Sbjct:  1891 EVAERKKCEELAKKIKKAAEKKKCKEAAKKEKEAAEREKCGELAKKIKK------AAEKK 2052

Query:   142 PYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEED 201
               +K A K KE  EK      AK + +AA+K    AE +KK+KE  E ++ EE  ++E++
Sbjct:  2053 KCKKLAKKEKETAEKKKCEKAAKKRKEAAEKKKC-AEAAKKEKEAAEKKKCEEAAKKEKE 2229

Query:   202 EEDEDEEED 210
               +  + E+
Sbjct:  2230 AAERKKCEE 2256

 Score = 120 (42.2 bits), Expect = 0.00071, P = 0.00071
 Identities = 55/170 (32%), Positives = 75/170 (44%), Frame = +1

Query:    25 EHKKKHPDASVNFSEFSKKCSERWKT-MSAKEKGKFEDMAKADKARYEREM--KTYIPPK 81
             + KKK  + +   +   KKC E  K    A EK K E  AK  K   E++   KT    K
Sbjct:  2377 KEKKKCRELAKKKAAEKKKCKEAAKKEKEAAEKKKCEKTAKKRKEEAEKKKCEKTAKKRK 2556

Query:    82 GETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQ 141
                +KK  +  A KR   A    C +   K K           AKK  +      A +K+
Sbjct:  2557 EAAEKKKCEKAAKKRKEEAEKKKCEKTAKKRKETAEKKKCEKAAKKRKQ------AAEKK 2718

Query:   142 PYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEE 194
               EK A K KE  EK   A  AK + + A+K   + E +KK+KE  E ++ EE
Sbjct:  2719 KCEKAAKKRKEAAEKKKCAEAAKKEKELAEKKKCE-EAAKKEKEVAERKKCEE 2874

 Score = 119 (41.9 bits), Expect = 0.00093, P = 0.00093
 Identities = 50/167 (29%), Positives = 75/167 (44%), Frame = +1

Query:    42 KKCSERWKTMSAKEKGKFED-MAKADKARYEREM-KTYIPPKGETKKKFKDPNAPKRPPS 99
             KKC +  K   A EK K +    K  KA  E++  +     K   KKK K+  A K   +
Sbjct:  2290 KKCKKLAKKKKAGEKNKLKKGNKKGKKALKEKKKCRELAKKKAAEKKKCKEA-AKKEKEA 2466

Query:   100 AFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIA 159
             A    C +   K K E         AKK  E      A +K+  EK A K KE+ EK   
Sbjct:  2467 AEKKKCEKTAKKRKEEAEKKKCEKTAKKRKE------AAEKKKCEKAAKKRKEEAEKKKC 2628

Query:   160 AYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEE 208
                AK + + A+K   K EK+ KK+++  +++  E   ++  E  E ++
Sbjct:  2629 EKTAKKRKETAEKK--KCEKAAKKRKQAAEKKKCEKAAKKRKEAAEKKK 2769

 Score = 119 (41.9 bits), Expect = 0.00093, P = 0.00093
 Identities = 55/182 (30%), Positives = 84/182 (46%), Frame = +1

Query:    27 KKKHPDASVNFSEFS--KKCSERWKT-MSAKEKGKFEDMAKADKARYEREMKTYIPPKGE 83
             KKK  +A+    E +  KKC E  K      E+ K E++AK  K   E++    +  K  
Sbjct:  2761 KKKCAEAAKKEKELAEKKKCEEAAKKEKEVAERKKCEELAKKIKKAAEKKKCKKLAKK-- 2934

Query:    84 TKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPY 143
              +KK  + N  K+        C +   K K         + AKK  E      A  K+  
Sbjct:  2935 -EKKAGEKNKLKKKAGKGKKKCKKLGKKSKRAAEKKKCAEAAKKEKE------AATKKKC 3093

Query:   144 EKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEE--EED 201
             E++A K KE  EK     RAK   +AA++   + E++KK KE  E ++ EE  ++  E  
Sbjct:  3094 EERAKKQKEAAEKKQCEERAKKLKEAAEQKQCE-ERAKKLKEAAEKKQCEERAKKLKEAA 3270

Query:   202 EEDEDEE 208
             E+ + EE
Sbjct:  3271 EQKQCEE 3291

 Score = 112 (39.4 bits), Expect = 0.0062, P = 0.0061
 Identities = 55/180 (30%), Positives = 78/180 (43%), Frame = +1

Query:    24 EEHKKKHPDASVNFSEFS--KKCSERWKTMS-AKEKGKFEDMAKADKARYEREMKTYIPP 80
             E  KKK    +    E +  KKC +  K    A EK K E  AK  K   E++       
Sbjct:  2608 EAEKKKCEKTAKKRKETAEKKKCEKAAKKRKQAAEKKKCEKAAKKRKEAAEKKKCAEAAK 2787

Query:    81 KGE--TKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAAD 138
             K +   +KK  +  A K    A    C E   KIK          +AKK         A 
Sbjct:  2788 KEKELAEKKKCEEAAKKEKEVAERKKCEELAKKIKKAAEKKKCKKLAKK------EKKAG 2949

Query:   139 DKQPYEKKAAKLKEKYEK-DIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197
             +K   +KKA K K+K +K    + RA  K   A+    + E + KKK EE  ++ +E  E
Sbjct:  2950 EKNKLKKKAGKGKKKCKKLGKKSKRAAEKKKCAEAAKKEKEAATKKKCEERAKKQKEAAE 3129

Query:   198 EEEDEE 203
             +++ EE
Sbjct:  3130 KKQCEE 3147

 Score = 112 (39.4 bits), Expect = 0.0062, P = 0.0061
 Identities = 56/187 (29%), Positives = 85/187 (45%), Frame = +1

Query:    22 CREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARYEREMKTYIPPK 81
             C++  KKK         + +KK  +     + KEK K  ++AK  KA  +++ K     +
Sbjct:  2296 CKKLAKKKKAGEKNKLKKGNKKGKK-----ALKEKKKCRELAKK-KAAEKKKCKEAAKKE 2457

Query:    82 GETKKKFK-DPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDK 140
              E  +K K +  A KR   A    C +   K K           AKK  E        +K
Sbjct:  2458 KEAAEKKKCEKTAKKRKEEAEKKKCEKTAKKRKEAAEKKKCEKAAKKRKE------EAEK 2619

Query:   141 QPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKS-KKKKEEEEDEEDEEDEEEE 199
             +  EK A K KE  EK      AK +  AA+K   K EK+ KK+KE  E ++  E  ++E
Sbjct:  2620 KKCEKTAKKRKETAEKKKCEKAAKKRKQAAEKK--KCEKAAKKRKEAAEKKKCAEAAKKE 2793

Query:   200 ED--EEDEDEE 208
             ++  E+ + EE
Sbjct:  2794 KELAEKKKCEE 2826

 Score = 109 (38.4 bits), Expect = 0.014, P = 0.014
 Identities = 56/183 (30%), Positives = 83/183 (45%), Frame = +1

Query:    27 KKKHPDASVNFSEFS--KKCSERWKTMS-AKEKGKFEDMAKADKARYEREM--KTYIPPK 81
             KKK   A+    E +  KKC +  K    A EK K E  AK  K   E++   K     K
Sbjct:  1663 KKKCEKAAKKRKEAAEKKKCEKAAKKRKEAAEKKKCEKSAKKRKEAAEKKKCEKAAKERK 1842

Query:    82 GETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQ 141
                +KK  +  A K    A    C E   KIK         + AKK  E      A +++
Sbjct:  1843 EAAEKKKCEEAAKKEKEVAERKKCEELAKKIKKAAEKKKCKEAAKKEKE------AAERE 2004

Query:   142 PYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEED--EEDEEEE 199
                + A K+K+  EK      AK + + A+K   K EK+ KK++E  +++   E  ++E+
Sbjct:  2005 KCGELAKKIKKAAEKKKCKKLAKKEKETAEKK--KCEKAAKKRKEAAEKKKCAEAAKKEK 2178

Query:   200 EDEEDEDEEE 209
             E  E +  EE
Sbjct:  2179 EAAEKKKCEE 2208

 Score = 109 (38.4 bits), Expect = 0.014, P = 0.014
 Identities = 56/190 (29%), Positives = 82/190 (43%), Frame = +1

Query:    25 EHKKKHPDAS-VNFSEFSKKCSE-RWKTMSAKEKGKFEDMAKADKARYEREM--KTYIPP 80
             E KK    A  +  +E  KKC +   K     EK K E  AK  K   E++   K     
Sbjct:  1564 ERKKCEELAKKIKKAEIKKKCKKLAKKEKETAEKKKCEKAAKKRKEAAEKKKCEKAAKKR 1743

Query:    81 KGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADD- 139
             K   +KK  + +A KR  +A    C +   + K         + AKK  E+      ++ 
Sbjct:  1744 KEAAEKKKCEKSAKKRKEAAEKKKCEKAAKERKEAAEKKKCEEAAKKEKEVAERKKCEEL 1923

Query:   140 ----KQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEED 195
                 K+  EKK  K   K EK+ AA R K   + AKK    AEK K KK  ++++E  E 
Sbjct:  1924 AKKIKKAAEKKKCKEAAKKEKE-AAEREKCG-ELAKKIKKAAEKKKCKKLAKKEKETAEK 2097

Query:   196 EEEEEDEEDEDE 207
             ++ E+  +   E
Sbjct:  2098 KKCEKAAKKRKE 2133

 Score = 108 (38.0 bits), Expect = 0.018, P = 0.018
 Identities = 55/179 (30%), Positives = 76/179 (42%), Frame = +1

Query:     7 KPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMS-AKEKGKFEDMAKA 65
             K   K    A   + C +  KK+  +A        KKC +  K    A EK K E  AK 
Sbjct:  2437 KEAAKKEKEAAEKKKCEKTAKKRKEEAE------KKKCEKTAKKRKEAAEKKKCEKAAKK 2598

Query:    66 DKARYEREM--KTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGD 123
              K   E++   KT    K   +KK  +  A KR  +A    C +   K K         +
Sbjct:  2599 RKEEAEKKKCEKTAKKRKETAEKKKCEKAAKKRKQAAEKKKCEKAAKKRKEAAEKKKCAE 2778

Query:   124 VAKKLGEMWNNTAADDKQPYEKKAAKLK--EKYEKDI--AAYRAKGKPDAAKKGVVKAEK 179
              AKK  E+      ++    EK+ A+ K  E+  K I  AA + K K   AKK     EK
Sbjct:  2779 AAKKEKELAEKKKCEEAAKKEKEVAERKKCEELAKKIKKAAEKKKCKK-LAKKEKKAGEK 2955

Query:   180 SKKKKE 185
             +K KK+
Sbjct:  2956 NKLKKK 2973

 Score = 108 (38.0 bits), Expect = 0.018, P = 0.018
 Identities = 55/182 (30%), Positives = 84/182 (46%), Frame = +1

Query:    27 KKKHPDASVNFSEFS--KKCSERWKTMS-AKEKGKFEDMAKADKARYEREMKTYIPPKGE 83
             KKK  +A+    E +  KKC E  K +  A EK K + +AK  KA  + ++K     KG+
Sbjct:  2191 KKKCEEAAKKEKEAAERKKCEELAKKIKKAAEKKKCKKLAKKKKAGEKNKLKKG-NKKGK 2367

Query:    84 T--KKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQ 141
                K+K K     K+  +A    C E   K K           AKK  E        +K+
Sbjct:  2368 KALKEKKKCRELAKKK-AAEKKKCKEAAKKEKEAAEKKKCEKTAKKRKE------EAEKK 2526

Query:   142 PYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEED 201
               EK A K KE  EK      AK + + A+K   K EK+ KK++E  +++  E   ++  
Sbjct:  2527 KCEKTAKKRKEAAEKKKCEKAAKKRKEEAEKK--KCEKTAKKRKETAEKKKCEKAAKKRK 2700

Query:   202 EEDEDEE 208
             +  E ++
Sbjct:  2701 QAAEKKK 2721

 Score = 108 (38.0 bits), Expect = 0.018, P = 0.018
 Identities = 54/192 (28%), Positives = 88/192 (45%), Frame = +1

Query:    27 KKKHPDASVNFSEFSK--KCSERWKTMS-AKEKGKFEDMAKADKARYEREM--KTYIPPK 81
             KKK  +A+    E ++  KC E  K +  A EK K + +AK +K   E++   K     K
Sbjct:  1951 KKKCKEAAKKEKEAAEREKCGELAKKIKKAAEKKKCKKLAKKEKETAEKKKCEKAAKKRK 2130

Query:    82 GETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQ 141
                +KK     A K   +A    C E   K K         ++AKK+ +         K 
Sbjct:  2131 EAAEKKKCAEAAKKEKEAAEKKKCEEAAKKEKEAAERKKCEELAKKIKKAAEKKKCK-KL 2307

Query:   142 PYEKKAA---KLKEKYEKDIAAYRAKGK-PDAAKKGVVKAEKSKKK-KEEEEDEEDEEDE 196
               +KKA    KLK+  +K   A + K K  + AKK   + +K K+  K+E+E  E ++ E
Sbjct:  2308 AKKKKAGEKNKLKKGNKKGKKALKEKKKCRELAKKKAAEKKKCKEAAKKEKEAAEKKKCE 2487

Query:   197 EEEEDEEDEDEEE 209
             +  +  ++E E++
Sbjct:  2488 KTAKKRKEEAEKK 2526

 Score = 105 (37.0 bits), Expect = 0.039, P = 0.038
 Identities = 59/182 (32%), Positives = 88/182 (48%), Frame = +1

Query:    27 KKKHPDASVNFSEFS--KKCSERWKT-MSAKEKGKFEDMAKADKARYEREMKTYIPPK-G 82
             KKK   A+    E +  KKC+E  K      EK K E+ AK +K   ER+    +  K  
Sbjct:  2713 KKKCEKAAKKRKEAAEKKKCAEAAKKEKELAEKKKCEEAAKKEKEVAERKKCEELAKKIK 2892

Query:    83 ETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQP 142
             +  +K K     K+   A      E + K+K +  G       KKLG+  +  AA+ K+ 
Sbjct:  2893 KAAEKKKCKKLAKKEKKA-----GE-KNKLK-KKAGKG-KKKCKKLGKK-SKRAAEKKKC 3045

Query:   143 YEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEE--EE 200
              E  A K KE   K     RAK + +AA+K   + E++KK KE  E ++ EE  ++  E 
Sbjct:  3046 AEA-AKKEKEAATKKKCEERAKKQKEAAEKKQCE-ERAKKLKEAAEQKQCEERAKKLKEA 3219

Query:   201 DEEDEDEE 208
              E+ + EE
Sbjct:  3220 AEKKQCEE 3243

 Score = 105 (37.0 bits), Expect = 0.039, P = 0.038
 Identities = 59/184 (32%), Positives = 82/184 (44%), Frame = +1

Query:    27 KKKHPDASVNFSEFS--KKCSERWKT-MSAKEKGKFEDMAKADKARYEREMKTYIPPKGE 83
             KKK   A+    E +  KKC+E  K    A EK K E+ AK +K   ER+         E
Sbjct:  2095 KKKCEKAAKKRKEAAEKKKCAEAAKKEKEAAEKKKCEEAAKKEKEAAERKKCE------E 2256

Query:    84 TKKKFKDPNAPKRPPSAFFLFCSEYRPKIK-GEHPGLSIGDVA--KKLGEMWNNTAADDK 140
               KK K     K+        C +   K K GE   L  G+    K L E         K
Sbjct:  2257 LAKKIKKAAEKKK--------CKKLAKKKKAGEKNKLKKGNKKGKKALKEKKKCRELAKK 2412

Query:   141 QPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEE 200
             +  EKK  K   K EK+ AA + K +   AKK   +AEK K +K  ++ +E  E ++ E+
Sbjct:  2413 KAAEKKKCKEAAKKEKE-AAEKKKCEK-TAKKRKEEAEKKKCEKTAKKRKEAAEKKKCEK 2586

Query:   201 DEEDEDEEED 210
               +   EE +
Sbjct:  2587 AAKKRKEEAE 2616

 Score = 104 (36.6 bits), Expect = 0.051, P = 0.050
 Identities = 54/170 (31%), Positives = 76/170 (44%), Frame = +1

Query:    42 KKCSE-RWKTMSAKEKGKFEDMAKADKARYEREMKTYIPPKGE--TKKKFKDPNAPKRPP 98
             KKC +   K     EK K E  AK  K   E++       K +   +KK  +  A K   
Sbjct:  2050 KKCKKLAKKEKETAEKKKCEKAAKKRKEAAEKKKCAEAAKKEKEAAEKKKCEEAAKKEKE 2229

Query:    99 SAFFLFCSEYRPKIKGEHPGLSIGDVAKK--LGEMWNNTAADDKQPYEKKAAKLKEKYE- 155
             +A    C E   KIK          +AKK   GE  N     +K+   KKA K K+K   
Sbjct:  2230 AAERKKCEELAKKIKKAAEKKKCKKLAKKKKAGEK-NKLKKGNKKG--KKALKEKKKCRE 2400

Query:   156 --KDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDE 207
               K  AA + K K +AAKK    AEK K +K  ++ +E+ E ++ E+  +   E
Sbjct:  2401 LAKKKAAEKKKCK-EAAKKEKEAAEKKKCEKTAKKRKEEAEKKKCEKTAKKRKE 2559

 Score = 103 (36.3 bits), Expect = 0.067, P = 0.064
 Identities = 51/174 (29%), Positives = 78/174 (44%), Frame = +1

Query:    35 VNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARYEREMKTYIPPKGETKKKFKDPNAP 94
             V  SE  KK  ++ K    KEK    ++ K ++A  E +++  +    E KKK K+    
Sbjct:   925 VKSSEPKKKGKKK-KNDEKKEKELEREILK-EQAEEEAKIRGVVK---EVKKKCKEKALK 1089

Query:    95 KRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKY 154
             K+        C +   K+K E        +AKK  E       D+K+  ++ A K KE  
Sbjct:  1090 KK--------CKDLGRKMKEEAEKKKCAALAKKQKE------EDEKKACKELAKKKKEAD 1227

Query:   155 EKDIAAYRA-KGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEE 208
             EK      A K K  A KK   KA K +K+  E++  E+   +E+E  E  + EE
Sbjct:  1228 EKKKCEEAANKEKKAAEKKKCEKAAKERKEAAEKKKCEEAAKKEKEAAERKKCEE 1392

 Score = 99 (34.8 bits), Expect = 0.19, P = 0.17
 Identities = 45/160 (28%), Positives = 70/160 (43%), Frame = +1

Query:    49 KTMSAKEKGKFEDMAKADKARYERE-MKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSE 107
             K+   K+KGK +   +  +   ERE +K     + + +   K+    K    A    C +
Sbjct:   928 KSSEPKKKGKKKKNDEKKEKELEREILKEQAEEEAKIRGVVKEVKK-KCKEKALKKKCKD 1104

Query:   108 YRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRA-KGK 166
                K+K E        +AKK  E       D+K+  ++ A K KE  EK      A K K
Sbjct:  1105 LGRKMKEEAEKKKCAALAKKQKE------EDEKKACKELAKKKKEADEKKKCEEAANKEK 1266

Query:   167 PDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEE 208
               A KK   KA K +K+  E++  E+   +E+E  E  + EE
Sbjct:  1267 KAAEKKKCEKAAKERKEAAEKKKCEEAAKKEKEAAERKKCEE 1392

 Score = 98 (34.5 bits), Expect = 0.25, P = 0.22
 Identities = 51/187 (27%), Positives = 79/187 (42%), Frame = +1

Query:    24 EEHKKKHPDASVNFSEFS--KKCSERWKTMSAK-EKGKFEDMAKADKARYEREM--KTYI 78
             E  KKK    +    E +  KKC +  K    + EK K E  AK  K   E++   K   
Sbjct:  2512 EAEKKKCEKTAKKRKEAAEKKKCEKAAKKRKEEAEKKKCEKTAKKRKETAEKKKCEKAAK 2691

Query:    79 PPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAAD 138
               K   +KK  +  A KR  +A    C+E   K K         + AKK  E+      +
Sbjct:  2692 KRKQAAEKKKCEKAAKKRKEAAEKKKCAEAAKKEKELAEKKKCEEAAKKEKEVAERKKCE 2871

Query:   139 DKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKK--KEEEEDEEDEEDE 196
             +     KKAA+ K+K +K     +  G+ +  KK   K +K  KK  K+ +   E ++  
Sbjct:  2872 ELAKKIKKAAE-KKKCKKLAKKEKKAGEKNKLKKKAGKGKKKCKKLGKKSKRAAEKKKCA 3048

Query:   197 EEEEDEED 204
             E  + E++
Sbjct:  3049 EAAKKEKE 3072

 Score = 98 (34.5 bits), Expect = 0.25, P = 0.22
 Identities = 57/190 (30%), Positives = 82/190 (43%), Frame = +1

Query:    25 EHKKKHPDASVNFSEFSKK-CSE-RWKTMSAKEKGKFEDMAKADKARYEREM--KTYIPP 80
             E KK    A     E  KK C E   K   A EK K E+ A  +K   E++   K     
Sbjct:  1132 EKKKCAALAKKQKEEDEKKACKELAKKKKEADEKKKCEEAANKEKKAAEKKKCEKAAKER 1311

Query:    81 KGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDK 140
             K   +KK  +  A K   +A    C E    IK         + AKK  E       ++ 
Sbjct:  1312 KEAAEKKKCEEAAKKEKEAAERKKCEELAKNIKKAAEKKKCKEAAKKEKEAAERKKCEEL 1491

Query:   141 QPYEKKAAKLKE-----KYEKDIAAYRAKGKPDAAKKGVVKAEKSKK-KKEEEEDEEDEE 194
                 KKAA+ K+     K  K++A  R K + + AKK + KAE  KK KK  ++++E  E
Sbjct:  1492 AKKIKKAAEKKKCEETAKKGKEVAE-RKKCE-ELAKK-IKKAEIKKKCKKLAKKEKETAE 1662

Query:   195 DEEEEEDEEDEDE 207
              ++ E+  +   E
Sbjct:  1663 KKKCEKAAKKRKE 1701

 Score = 97 (34.1 bits), Expect = 0.32, P = 0.27
 Identities = 48/174 (27%), Positives = 76/174 (43%), Frame = +1

Query:    36 NFSEFSKK-CSERWKTMSAKEKGKFEDMAKADKARYEREMKTYIPPKGETKKKFKDPNAP 94
             NF+E  +K  +  +K M  K K        A+       +K+   PK + KKK  D    
Sbjct:   808 NFTEDERKRLAASYKCMGTKIKSICRKRVIAEMCEAAGYVKSS-EPKKKGKKKKNDEKKE 984

Query:    95 KRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKY 154
             K          +E   KI+G      + +V KK  E     A   K+  +    K+KE+ 
Sbjct:   985 KELEREILKEQAEEEAKIRGV-----VKEVKKKCKEK----AL--KKKCKDLGRKMKEEA 1131

Query:   155 EKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEE 209
             EK   A  AK + +  +K   K E +KKKKE +E ++ EE   +E+   ++ + E
Sbjct:  1132 EKKKCAALAKKQKEEDEKKACK-ELAKKKKEADEKKKCEEAANKEKKAAEKKKCE 1293

 Score = 93 (32.7 bits), Expect = 0.91, P = 0.60
 Identities = 56/186 (30%), Positives = 78/186 (41%), Frame = +1

Query:    20 QTCREEHKKKHPDASVNFSEFSKKCSERWKT-MSAKEKGKFEDMAKADKARYEREMKTYI 78
             Q C +  KK+   A        KKC+E  K    A EK K  + AK +K   E++ K   
Sbjct:  3757 QKCAKAAKKEKEAAE------KKKCAEAAKKEQEAAEKKKCAEAAKKEKEA-EKKRKCEK 3915

Query:    79 PPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEM--WNNTA 136
               K    K+       +   +A    C+    K K          +AKK  E   W   A
Sbjct:  3916 AEKAAALKRQCAKLVIRAKEAALRKKCAIIAKKAKMAAEKKECEKLAKKAKEAIEWKKCA 4095

Query:   137 --ADDKQPYEKK-AAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDE 193
               A  K+  EKK  AKL +K EK+ AA + K   D AK      +K  KKK   E+ +  
Sbjct:  4096 KLAKKKREAEKKKCAKLAKK-EKE-AAEKKKRCKDLAKN----KKKGHKKKGRNENRKKR 4257

Query:   194 EDEEEEEDEEDE 205
              D  E+  ++ E
Sbjct:  4258 TDC*EKSRQKYE 4293

 Score = 89 (31.3 bits), Expect = 2.6, P = 0.92
 Identities = 46/175 (26%), Positives = 75/175 (42%), Frame = +1

Query:    36 NFSEFSKK-CSERWKTMSAKEKGKFEDMAKADKARYEREMKTYIPPKGETKKKFKDPNAP 94
             NF+E  +K  +  +K M  K K        A+       +K+   PK + KKK  D    
Sbjct:   808 NFTEDERKRLAASYKCMGTKIKSICRKRVIAEMCEAAGYVKSS-EPKKKGKKKKNDEKKE 984

Query:    95 KRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKK--AAKLKE 152
             K          +E   KI+G    +      K L +   +     K+  EKK  AA  K+
Sbjct:   985 KELEREILKEQAEEEAKIRGVVKEVKKKCKEKALKKKCKDLGRKMKEEAEKKKCAALAKK 1164

Query:   153 KYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEED 210
             + E+D      K   + AKK   K E  +KKK EE   ++++  E+++ E+   E ++
Sbjct:  1165 QKEED----EKKACKELAKK---KKEADEKKKCEEAANKEKKAAEKKKCEKAAKERKE 1317


>U65487;L21182 Human ribosomal RNA upstream binding transcription factor (UBTF)
            Length = 7032

  Plus Strand HSPs:

 Score = 102 (35.9 bits), Expect = 1.7e-08, Sum P(3) = 1.7e-08
 Identities = 17/24 (70%), Positives = 23/24 (95%), Frame = +3

Query:   190 EEDEEDEEEEEDEEDEDEEEDDDD 213
             +E EED+EE+ED+EDEDEEE+DD+
Sbjct:  6276 KESEEDDEEDEDDEDEDEEEEDDE 6347

 Score = 102 (35.9 bits), Expect = 1.7e-08, Sum P(3) = 1.7e-08
 Identities = 19/35 (54%), Positives = 28/35 (80%), Frame = +3

Query:   180 SKKKKEEEEDEEDEEDE-EEEEDEEDEDEEEDDDD 213
             SK+ +E++E++ED+EDE EEEED+E+ D  ED  D
Sbjct:  6273 SKESEEDDEEDEDDEDEDEEEEDDENGDSSEDGGD 6377

 Score = 98 (34.5 bits), Expect = 1.7e-08, Sum P(3) = 1.7e-08
 Identities = 19/47 (40%), Positives = 28/47 (59%), Frame = +3

Query:    94 PKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDK 140
             PKRP SA F+F  E R +++ E P LS  ++ + L  MWN+ +   K
Sbjct:  2952 PKRPVSAMFIFSEEKRRQLQEERPELSESELTRLLARMWNDLSEKKK 3092

 Score = 88 (31.0 bits), Expect = 5.5e-07, Sum P(3) = 5.5e-07
 Identities = 13/24 (54%), Positives = 23/24 (95%), Frame = +2

Query:   191 EDEEDEEEEEDEEDEDEEEDDDDE 214
             ++EED+E+E+D+ED+DE+ED++ E
Sbjct:  6506 QNEEDDEDEDDDEDDDEDEDNESE 6577

 Score = 84 (29.6 bits), Expect = 1.4e-06, Sum P(3) = 1.4e-06
 Identities = 16/49 (32%), Positives = 29/49 (59%), Frame = +2

Query:   157 DIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDE 205
             D A +  +G       G   +  + + +E++EDE+D+ED++E+ED E E
Sbjct:  6431 DRAQWEGRGVLPGGPPGDSTSFLTPQNEEDDEDEDDDEDDDEDEDNESE 6577

 Score = 83 (29.2 bits), Expect = 1.7e-06, Sum P(3) = 1.7e-06
 Identities = 19/44 (43%), Positives = 30/44 (68%), Frame = +3

Query:   180 SKKKKEEEEDEEDEEDE-EEEEDEEDEDEEED---------DDD 213
             SK+ +E++E++ED+EDE EEEED+E+ D  ED         +D+
Sbjct:  6273 SKESEEDDEEDEDDEDEDEEEEDDENGDSSEDGGDSSESSSEDE 6404

 Score = 81 (28.5 bits), Expect = 2.7e-06, Sum P(3) = 2.7e-06
 Identities = 21/49 (42%), Positives = 28/49 (57%), Frame = +3

Query:   183 KKEEEEDEEDEEDEEEEEDEED------------------EDEEEDDDD 213
             K+ EE+DEEDE+DE+E+E+EED                  EDE ED D+
Sbjct:  6276 KESEEDDEEDEDDEDEDEEEEDDENGDSSEDGGDSSESSSEDESEDGDE 6422

 Score = 81 (28.5 bits), Expect = 2.7e-06, Sum P(3) = 2.7e-06
 Identities = 25/50 (50%), Positives = 31/50 (62%), Frame = +3

Query:   180 SKKKKEE-EEDEEDE-EDEEEEEDE-----ED---------EDEEEDDDD 213
             SK+ +E+ EEDE+DE EDEEEE+DE     ED         EDE ED D+
Sbjct:  6273 SKESEEDDEEDEDDEDEDEEEEDDENGDSSEDGGDSSESSSEDESEDGDE 6422

 Score = 79 (27.8 bits), Expect = 4.3e-06, Sum P(3) = 4.3e-06
 Identities = 11/24 (45%), Positives = 21/24 (87%), Frame = +2

Query:   185 EEEEDEEDEEDEEEEEDEEDEDEE 208
             + EED+EDE+D+E+++++ED + E
Sbjct:  6506 QNEEDDEDEDDDEDDDEDEDNESE 6577

 Score = 79 (27.8 bits), Expect = 4.3e-06, Sum P(3) = 4.3e-06
 Identities = 14/26 (53%), Positives = 21/26 (80%), Frame = +2

Query:   185 EEEEDEEDEEDEEEEEDEEDEDEEED 210
             + EED+EDE+D+E+  D+EDED E +
Sbjct:  6506 QNEEDDEDEDDDED--DDEDEDNESE 6577

 Score = 78 (27.5 bits), Expect = 5.5e-06, Sum P(3) = 5.5e-06
 Identities = 11/24 (45%), Positives = 22/24 (91%), Frame = +2

Query:   184 KEEEEDEEDEEDEEEEEDEEDEDE 207
             + EE+DE++++DE+++EDE++E E
Sbjct:  6506 QNEEDDEDEDDDEDDDEDEDNESE 6577

 Score = 77 (27.1 bits), Expect = 6.9e-06, Sum P(3) = 6.9e-06
 Identities = 23/71 (32%), Positives = 38/71 (53%), Frame = +3

Query:   146 KAAKLKEKYEKDIAAYRAKGK---PDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDE 202
             +AA+ K + + D +A +  GK   PDA   G     +   + +          E EE+DE
Sbjct:  6123 QAARPKPQIQPDYSAVQV-GKEPLPDAGAWGGGHCLEWLGRDQRPLMCLHPSKESEEDDE 6299

Query:   203 EDEDEEEDDDDE 214
             EDED+E++D++E
Sbjct:  6300 EDEDDEDEDEEE 6335

 Score = 74 (26.0 bits), Expect = 1.4e-05, Sum P(3) = 1.4e-05
 Identities = 17/60 (28%), Positives = 30/60 (50%), Frame = +2

Query:   157 DIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDD----D 212
             D A +  +G       G   +  + + +E++EDE+D+ED++E+ED E E          D
Sbjct:  6431 DRAQWEGRGVLPGGPPGDSTSFLTPQNEEDDEDEDDDEDDDEDEDNESEGSSSSSSSSGD 6610

 Score = 69 (24.3 bits), Expect = 3.5e-07, Sum P(4) = 3.5e-07
 Identities = 15/56 (26%), Positives = 31/56 (55%), Frame = +3

Query:     1 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEK 56
             G+G  +KP+  +S+   F +  R + +++ P+ S   SE ++  +  W  +S K+K
Sbjct:  2931 GQGGSEKPKRPVSAMFIFSEEKRRQLQEERPELSE--SELTRLLARMWNDLSEKKK 3092

 Score = 58 (20.4 bits), Expect = 3.5e-07, Sum P(4) = 3.5e-07
 Identities = 16/66 (24%), Positives = 31/66 (46%), Frame = +1

Query:    90 DPNAPKRPP-SAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAA 148
             DP +   PP + +  F  E      GE   L + +   ++G  W   +   K+ Y+K A 
Sbjct:  4315 DPPSTNPPPRNGYQKFSQELLSN--GELNHLPLKERMVEIGSRWQRISQSQKEHYKKLAE 4488

Query:   149 KLKEKYE 155
             + +++Y+
Sbjct:  4489 EQQKQYK 4509

 Score = 56 (19.7 bits), Expect = 5.6e-07, Sum P(4) = 5.6e-07
 Identities = 14/32 (43%), Positives = 20/32 (62%), Frame = +2

Query:   125 AKKLGEM-WNNTAADDKQPYEKKAAKLKEKYE 155
             A K  EM WNN    +K  + KKAA+ +++YE
Sbjct:  3665 ALKAMEMTWNNMEKKEKLMWIKKAAEDQKRYE 3760

 Score = 53 (18.7 bits), Expect = 1.7e-08, Sum P(3) = 1.7e-08
 Identities = 17/52 (32%), Positives = 25/52 (48%), Frame = +2

Query:     8 PRGK-MSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKF 59
             PRG   +SY+ +   C E          V  +E    CS++WK +S KEK  +
Sbjct:  2120 PRGSDRNSYSLY---CAELMANMK---DVPSTERMVLCSQQWKLLSQKEKDAY 2260

 Score = 51 (18.0 bits), Expect = 0.018, Sum P(2) = 0.018
 Identities = 7/37 (18%), Positives = 22/37 (59%), Frame = +1

Query:    47 RWKTMSAKEKGKFEDMAKADKARYEREMKTYIPPKGE 83
             RW+ +S  +K  ++ +A+  + +Y+  +  ++  +G+
Sbjct:  4435 RWQRISQSQKEHYKKLAEEQQKQYKVHLDLWVKVRGQ 4545

 Score = 48 (16.9 bits), Expect = 3.5e-07, Sum P(4) = 3.5e-07
 Identities = 15/47 (31%), Positives = 24/47 (51%), Frame = +3

Query:    50 TMSAKEKGKFEDMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKR 96
             T     + K++    A KA+ ER+      P GE +++ K P +PKR
Sbjct:  3390 TPGPSPQAKYKAREAALKAQSERK------PGGEREERGKLPESPKR 3512

 Score = 46 (16.2 bits), Expect = 0.00082, Sum P(3) = 0.00081
 Identities = 10/24 (41%), Positives = 12/24 (50%), Frame = +2

Query:    48 WKTMSAKEKGKFEDMAKADKARYE 71
             W  M  KEK  +   A  D+ RYE
Sbjct:  3689 WNNMEKKEKLMWIKKAAEDQKRYE 3760

 Score = 45 (15.8 bits), Expect = 1.1e-07, Sum P(3) = 1.1e-07
 Identities = 10/47 (21%), Positives = 20/47 (42%), Frame = +2

Query:    39 EFSKKCSERWKTMSAKEKGKFEDMAKADKARYEREMKTYIPPKGETK 85
             E      ++W  +S K++ K+   A   +  YE  +     P G ++
Sbjct:  1442 EVKDSLGKQWSQLSDKKRLKWIHKALEQRKEYEVRLPLRSSPSGSSR 1582

 Score = 45 (15.8 bits), Expect = 6.5e-06, Sum P(4) = 6.5e-06
 Identities = 14/48 (29%), Positives = 26/48 (54%), Frame = +2

Query:    97 PPSAFFLFCSEYRPKIKG-EHPGLSIGDVAKKLGEMWNNTAADDKQPYE 144
             PP+A  L   +   ++K  +   ++  ++ KK   MW   AA+D++ YE
Sbjct:  3617 PPTADTLIGPQ-NDRVKALKAMEMTWNNMEKKEKLMWIKKAAEDQKRYE 3760

 Score = 45 (15.8 bits), Expect = 8.5e-05, Sum P(3) = 8.5e-05
 Identities = 11/30 (36%), Positives = 14/30 (46%), Frame = +3

Query:    71 EREMKTYIPPKGETK--KKFKDPNAPKRPP 98
             +RE+     P   T   KK K    PK+PP
Sbjct:  4149 QRELSEMRAPPAATNSSKKMKFQGEPKKPP 4238

 Score = 43 (15.1 bits), Expect = 0.12, Sum P(2) = 0.11
 Identities = 8/33 (24%), Positives = 18/33 (54%), Frame = +2

Query:   123 DVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYE 155
             +V   LG+ W+  +   +  +  KA + +++YE
Sbjct:  1442 EVKDSLGKQWSQLSDKKRLKWIHKALEQRKEYE 1540


>M63424 Tetrahymena thermophila high-mobility-group protein C (HMG C), 3'
        Length = 686

  Plus Strand HSPs:

 Score = 147 (51.7 bits), Expect = 3.7e-08, P = 3.7e-08
 Identities = 37/94 (39%), Positives = 50/94 (53%), Frame = +1

Query:    89 KDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAA 148
             K P  PKRP SAFFLF       +K E+P   I ++   + E W      +K+ YE   +
Sbjct:   208 K*PAPPKRPLSAFFLFK*HNYE*VKKENPNAKITELTSMIAEKWKAVGEKEKKKYETL*S 387

Query:   149 KLKEKYEKDIAAYRAK-GKPDAAKKGVVKAEKSKK 182
             + K KYEK + AY  K GKP+  KK + K +K  K
Sbjct:   388 EAKAKYEKAL*AYEKKYGKPEK*KK-IKKNKKGSK 489

 Score = 109 (38.4 bits), Expect = 0.0053, P = 0.0053
 Identities = 25/82 (30%), Positives = 45/82 (54%), Frame = +1

Query:     5 PKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAK 64
             P  P+  +S++  F     E  KK++P+A +  +E +   +E+WK +  KEK K+E +  
Sbjct:   214 PAPPKRPLSAFFLFK*HNYE*VKKENPNAKI--TELTSMIAEKWKAVGEKEKKKYETL*S 387

Query:    65 ADKARYEREMKTYIPPKGETKK 86
               KA+YE+ +  Y    G+ +K
Sbjct:   388 EAKAKYEKAL*AYEKKYGKPEK 453


>M17440;J05095 Mouse MHC (H-2) S region complement component C4 gene, complete
            Length = 17,522

  Minus Strand HSPs:

 Score = 152 (53.5 bits), Expect = 4.3e-08, P = 4.3e-08
 Identities = 30/78 (38%), Positives = 55/78 (70%), Frame = -1

Query:   138 DDKQPYEKKAAKLKEKYEKDIAAYR-AKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDE 196
             + K+  E+K  K +EK+E++    +  + + +  K+G  + E+ KKK+EEE DEE+E+ E
Sbjct:  7157 EKKEEEEEKEEKEEEKFEEEEEKEKEVENEEEEEKEGKEEEEEEKKKEEEE*DEEEEKKE 6978

Query:   197 EEEEDEEDEDEEEDDDDE 214
             EEEE++E+E +EE++++E
Sbjct:  6977 EEEEEKEEEGKEEEEEEE 6924

 Score = 138 (48.6 bits), Expect = 4.9e-06, P = 4.9e-06
 Identities = 32/85 (37%), Positives = 55/85 (64%), Frame = -1

Query:   138 DDKQPYEKKAAKLKEKYEKDIAAYR-AKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDE 196
             + K+  E+K  K +EK+E++    +  + + +  K+G  + E+ KKK+EEE DEE+E+ E
Sbjct:  7157 EKKEEEEEKEEKEEEKFEEEEEKEKEVENEEEEEKEGKEEEEEEKKKEEEE*DEEEEKKE 6978

Query:   197 EEEED-------EEDEDEEEDDDDE 214
             EEEE+       EE+E+EEE+ ++E
Sbjct:  6977 EEEEEKEEEGKEEEEEEEEENKEEE 6903

 Score = 122 (42.9 bits), Expect = 0.00045, P = 0.00045
 Identities = 25/73 (34%), Positives = 49/73 (67%), Frame = -1

Query:   139 DKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKA-EKSKKKKEEEEDEEDEEDEE 197
             +++ +E++  K KE   ++      K + +  KK   +  ++ ++KKEEEE+E++EE +E
Sbjct:  7121 EEEKFEEEEEKEKEVENEEEEEKEGKEEEEEEKKKEEEE*DEEEEKKEEEEEEKEEEGKE 6942

Query:   198 EEEDEEDEDEEED 210
             EEE+EE+E++EE+
Sbjct:  6941 EEEEEEEENKEEE 6903

 Score = 121 (42.6 bits), Expect = 0.00076, Sum P(2) = 0.00076
 Identities = 19/37 (51%), Positives = 34/37 (91%), Frame = -3

Query:   178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             EK +K+KEEEE+E+ EE+ EE+E++++E++EED++D+
Sbjct:  6900 EKGEKEKEEEEEEDKEEENEEDEEDKEEEKEEDEEDK 6790

 Score = 120 (42.2 bits), Expect = 0.0010, Sum P(2) = 0.0010
 Identities = 22/44 (50%), Positives = 37/44 (84%), Frame = -3

Query:   172 KGVVKAEKSKKKKEEEE-DEEDEEDEEEEEDEEDEDEEEDDDDE 214
             +G  K EK K+++EEE+ +EE+EEDEE++E+E++EDEE+  ++E
Sbjct:  6909 RGEEKGEKEKEEEEEEDKEEENEEDEEDKEEEKEEDEEDKVEEE 6778

 Score = 115 (40.5 bits), Expect = 0.0042, Sum P(2) = 0.0042
 Identities = 27/49 (55%), Positives = 36/49 (73%), Frame = -3

Query:   172 KGVVKAEKSKKKKEEE----EDEEDEEDEEEE--EDEEDEDEEEDDDDE 214
             +G  K EK K+++EEE    E+EEDEED+EEE  EDEED+ EEE++  E
Sbjct:  6909 RGEEKGEKEKEEEEEEDKEEENEEDEEDKEEEKEEDEEDKVEEEEEKFE 6763

 Score = 112 (39.4 bits), Expect = 0.0066, P = 0.0066
 Identities = 24/78 (30%), Positives = 53/78 (67%), Frame = -1

Query:   138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEE-EEDEEDEEDE 196
             ++++  E++ ++ +E+ E+       KG+ +  +    + E+  KK+EE E++EE+EEDE
Sbjct:  7343 EEEEEREEERSEEEEEEEEGEEEEIEKGEEEEKE*YEEREEEE*KKEEE*EKEEEEEEDE 7164

Query:   197 EEEEDEEDEDEEEDDDDE 214
             +EE+ EE+E++EE ++++
Sbjct:  7163 KEEKKEEEEEKEEKEEEK 7110

 Score = 109 (38.4 bits), Expect = 0.015, P = 0.015
 Identities = 20/39 (51%), Positives = 33/39 (84%), Frame = -1

Query:   176 KAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             K E+ +K++EEEEDE++E+ EEEEE EE E+E+ ++++E
Sbjct:  7208 KEEE*EKEEEEEEDEKEEKKEEEEEKEEKEEEKFEEEEE 7092

 Score = 108 (38.0 bits), Expect = 0.019, P = 0.019
 Identities = 22/64 (34%), Positives = 44/64 (68%), Frame = -1

Query:   151 KEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEED 210
             +E+ E+D    + + + +  +K   K E+ ++K++E E+EE+EE E +EE+EE++ +EE+
Sbjct:  7187 EEEEEEDEKEEKKEEEEEKEEKEEEKFEEEEEKEKEVENEEEEEKEGKEEEEEEKKKEEE 7008

Query:   211 DDDE 214
             + DE
Sbjct:  7007 E*DE 6996

 Score = 107 (37.7 bits), Expect = 0.025, P = 0.024
 Identities = 26/76 (34%), Positives = 49/76 (64%), Frame = -1

Query:   138 DDKQPYEKKAA---KLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEE 194
             ++K+ YE++     K +E+ EK+      + K +  ++   K EK ++K EEEE++E E 
Sbjct:  7253 EEKE*YEEREEEE*KKEEE*EKEEEEEEDE-KEEKKEEEEEKEEKEEEKFEEEEEKEKEV 7077

Query:   195 DEEEEEDEEDEDEEEDD 211
             + EEEE++E ++EEE++
Sbjct:  7076 ENEEEEEKEGKEEEEEE 7026

 Score = 106 (37.3 bits), Expect = 0.049, Sum P(2) = 0.048
 Identities = 26/67 (38%), Positives = 43/67 (64%), Frame = -3

Query:   144 EKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEE 203
             E+K  K KE+ E++      + + D   K   K E+ ++ K EEE+E+ EE+E+EE+++E
Sbjct:  6903 EEKGEKEKEEEEEEDK--EEENEEDEEDKEEEK-EEDEEDKVEEEEEKFEEEEKEEKEKE 6733

Query:   204 DEDEEED 210
             +E EEED
Sbjct:  6732 EEKEEED 6712

 Score = 106 (37.3 bits), Expect = 0.049, Sum P(2) = 0.048
 Identities = 26/72 (36%), Positives = 45/72 (62%), Frame = -3

Query:   144 EKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEED---EEDEEDEEEEE 200
             E+K  K KE+ E++      + + D   K   K E  + K EEEE+   EE++E++E+EE
Sbjct:  6903 EEKGEKEKEEEEEEDK--EEENEEDEEDKEEEKEEDEEDKVEEEEEKFEEEEKEEKEKEE 6730

Query:   201 DEEDEDEEEDDDDE 214
             ++E+ED+ E  ++E
Sbjct:  6729 EKEEEDKAEAQEEE 6688

 Score = 104 (36.6 bits), Expect = 0.085, Sum P(2) = 0.081
 Identities = 17/37 (45%), Positives = 33/37 (89%), Frame = -2

Query:   178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             EK +++KEEEE++E++E+E +EE+E+++++EE+D  E
Sbjct:  6679 EKEEEEKEEEEEKEEKEEEGKEEEEKEKEKEEEDKAE 6569

 Score = 102 (35.9 bits), Expect = 0.14, Sum P(2) = 0.13
 Identities = 27/74 (36%), Positives = 46/74 (62%), Frame = -3

Query:   144 EKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEED--EEDEEDE---EE 198
             E+K  K KE+ E++      + + D   K   K E  + K EEEE+  EE+E++E   EE
Sbjct:  6903 EEKGEKEKEEEEEEDK--EEENEEDEEDKEEEKEEDEEDKVEEEEEKFEEEEKEEKEKEE 6730

Query:   199 EEDEEDEDEEEDDDDE 214
             E++EED+ E +++++E
Sbjct:  6729 EKEEEDKAEAQEEEEE 6682

 Score = 99 (34.8 bits), Expect = 0.31, Sum P(2) = 0.27
 Identities = 19/53 (35%), Positives = 38/53 (71%), Frame = -2

Query:   164 KGKPDAAKKGVVKAEKSKKKKEEEEDEEDE--EDEEEEEDEEDEDEEEDDDDE 214
             +G+      G  K E+ K+++EE+E++E+E  E+EE+E+++E+ED+ E  ++E
Sbjct:  6712 QGRGTGGGGGEEKEEEEKEEEEEKEEKEEEGKEEEEKEKEKEEEDKAEAQEEE 6554

 Score = 99 (34.8 bits), Expect = 0.31, Sum P(2) = 0.27
 Identities = 23/74 (31%), Positives = 45/74 (60%), Frame = -3

Query:   139 DKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEE 198
             +K+  E++    +E+ E+D      + + D   K     E+ ++K EEEE EE E++EE+
Sbjct:  6891 EKEKEEEEEEDKEEENEEDEEDKEEEKEEDEEDK----VEEEEEKFEEEEKEEKEKEEEK 6724

Query:   199 EEDEEDEDEEEDDD 212
             EE+++ E +EE+++
Sbjct:  6723 EEEDKAEAQEEEEE 6682

 Score = 98 (34.5 bits), Expect = 0.41, Sum P(2) = 0.34
 Identities = 17/53 (32%), Positives = 38/53 (71%), Frame = -2

Query:   162 RAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             R  G     +K   + E+ ++K+E+EE+ ++EE++E+E++EED+ E +++++E
Sbjct:  6706 RGTGGGGGEEKEEEEKEEEEEKEEKEEEGKEEEEKEKEKEEEDKAEAQEEEEE 6548

 Score = 97 (34.1 bits), Expect = 0.34, P = 0.29
 Identities = 23/58 (39%), Positives = 35/58 (60%), Frame = -1

Query:   160 AYRA---KGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             AYR    + KP   +    + E+ ++  EEEE+ E+E  EEEEE+EE E+EE +  +E
Sbjct:  7427 AYRD*D*RTKPQTLR*EEEEEEEGEEG*EEEEEREEERSEEEEEEEEGEEEEIEKGEE 7254

 Score = 93 (32.7 bits), Expect = 1.5, Sum P(2) = 0.77
 Identities = 24/93 (25%), Positives = 51/93 (54%), Frame = -3

Query:   113 KGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKK 172
             +GE  G   G      GE       ++++  +K+     E+ E+D    + + + D  ++
Sbjct:  6954 RGEGGGGGRGGRE*GRGEEKGEKEKEEEEEEDKEEEN--EEDEEDKEEEKEEDEEDKVEE 6781

Query:   173 GVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDE 205
                K E+ +K+++E+E+E++EED+ E ++EE+E
Sbjct:  6780 EEEKFEEEEKEEKEKEEEKEEEDKAEAQEEEEE 6682

 Score = 91 (32.0 bits), Expect = 1.6, P = 0.80
 Identities = 16/39 (41%), Positives = 30/39 (76%), Frame = -1

Query:   176 KAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             + E+  +++EE E+E  EE+EEEEE EE+E E+ +++++
Sbjct:  7361 EGEEG*EEEEEREEERSEEEEEEEEGEEEEIEKGEEEEK 7245

 Score = 91 (32.0 bits), Expect = 1.6, P = 0.80
 Identities = 18/39 (46%), Positives = 30/39 (76%), Frame = -1

Query:   178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDE--EEDDDDE 214
             E+ +++ EEEE+EE+ E+EE E+ EE+E E  EE +++E
Sbjct:  7331 EREEERSEEEEEEEEGEEEEIEKGEEEEKE*YEEREEEE 7215

 Score = 46 (16.2 bits), Expect = 0.00076, Sum P(2) = 0.00076
 Identities = 21/65 (32%), Positives = 30/65 (46%), Frame = -1

Query:    23 REEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKA--RYEREMKTYIPP 80
             +EE  +K  +   +  E  KK  E  K    KE+ KFE+  + +K     E E K     
Sbjct:  7208 KEEE*EKEEEEEEDEKE-EKKEEEEEK--EEKEEEKFEEEEEKEKEVENEEEEEKEGKEE 7038

Query:    81 KGETKKK 87
             + E KKK
Sbjct:  7037 EEEEKKK 7017

 Score = 45 (15.8 bits), Expect = 0.11, Sum P(2) = 0.10
 Identities = 14/51 (27%), Positives = 25/51 (49%), Frame = -3

Query:    23 REEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARYERE 73
             +EE K++  +  V   E      E+++    +EK K E+  + DKA  + E
Sbjct:  6825 KEEEKEEDEEDKVEEEE------EKFEEEEKEEKEKEEEKEEEDKAEAQEE 6691

 Score = 45 (15.8 bits), Expect = 0.11, Sum P(2) = 0.10
 Identities = 18/73 (24%), Positives = 34/73 (46%), Frame = -3

Query:    24 EEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARYEREMKTYIPPKGE 83
             EE K++  +      E  K+  E  K    +E+ KFE+  K +K   E+E +     K E
Sbjct:  6867 EEDKEEENEEDEEDKEEEKEEDEEDKV--EEEEEKFEEEEKEEK---EKEEEKEEEDKAE 6703

Query:    84 TKKKFKDPNAPKR 96
              +++ ++    +R
Sbjct:  6702 AQEEEEERRRKRR 6664


>U83985 Rattus norvegicus alpha 1B adrenergic receptor gene, 5' upstream
        Length = 513

  Plus Strand HSPs:

 Score = 137 (48.2 bits), Expect = 4.8e-08, P = 4.8e-08
 Identities = 23/46 (50%), Positives = 41/46 (89%), Frame = +2

Query:   169 AAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             A ++  V+ E+ ++++EEEE+EE+EE+EEEEE+EE+E+EEE++++E
Sbjct:    92 ATQQDPVQEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 229

 Score = 132 (46.5 bits), Expect = 1.7e-07, P = 1.7e-07
 Identities = 22/41 (53%), Positives = 38/41 (92%), Frame = +2

Query:   174 VVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             V + E+ ++++EEEE+EE+EE+EEEEE+EE+E+EEE++++E
Sbjct:   110 VQEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 232

 Score = 130 (45.8 bits), Expect = 3.0e-07, P = 3.0e-07
 Identities = 21/37 (56%), Positives = 36/37 (97%), Frame = +2

Query:   178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             E+ ++++EEEE+EE+EE+EEEEE+EE+E+EEE++++E
Sbjct:   125 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 235

 Score = 130 (45.8 bits), Expect = 3.0e-07, P = 3.0e-07
 Identities = 21/37 (56%), Positives = 36/37 (97%), Frame = +2

Query:   178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             E+ ++++EEEE+EE+EE+EEEEE+EE+E+EEE++++E
Sbjct:   128 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 238

 Score = 126 (44.4 bits), Expect = 9.1e-07, P = 9.1e-07
 Identities = 20/37 (54%), Positives = 36/37 (97%), Frame = +2

Query:   178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             E+ ++++EEEE+EE+EE+EEEEE+EE+E+EEE+++++
Sbjct:   131 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEK 241

 Score = 124 (43.7 bits), Expect = 1.6e-06, P = 1.6e-06
 Identities = 21/45 (46%), Positives = 38/45 (84%), Frame = +2

Query:   168 DAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDD 212
             D  ++   + E+ ++++EEEE+EE+EE+EEEEE+EE+E+EEE+++
Sbjct:   104 DPVQEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 238

 Score = 122 (42.9 bits), Expect = 1.1e-05, P = 1.1e-05
 Identities = 22/41 (53%), Positives = 35/41 (85%), Frame = +2

Query:   174 VVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             +V A +    +EEEE+EE+EE+EEEEE+EE+E+EEE++++E
Sbjct:    83 LV*ATQQDPVQEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 205

 Score = 113 (39.8 bits), Expect = 0.00051, P = 0.00051
 Identities = 20/78 (25%), Positives = 47/78 (60%), Frame = +1

Query:   132 WNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEE 191
             +  + +D  +P  ++  + + +  +     R + +    ++   +  + ++++ +EE+EE
Sbjct:    76 FKTSVSDTARPSPRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRKEEEEE 255

Query:   192 DEEDEEEEEDEEDEDEEE 209
             +EE+EEEEE+EE+E+EEE
Sbjct:   256 EEEEEEEEEEEEEEEEEE 309

 Score = 107 (37.7 bits), Expect = 4.8e-05, Sum P(2) = 4.8e-05
 Identities = 18/34 (52%), Positives = 29/34 (85%), Frame = +1

Query:   176 KAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEE 209
             +  + ++K+EEEE+EE+EE+EEEEE+EE+E+  E
Sbjct:   217 RRRRRRRKEEEEEEEEEEEEEEEEEEEEEEEGRE 318

 Score = 105 (37.0 bits), Expect = 4.8e-06, Sum P(2) = 4.8e-06
 Identities = 18/33 (54%), Positives = 28/33 (84%), Frame = +1

Query:   176 KAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEE 208
             +  + +K++EEEE+EE+EE+EEEEE+EE+E  E
Sbjct:   220 RRRRRRKEEEEEEEEEEEEEEEEEEEEEEEGRE 318

 Score = 104 (36.6 bits), Expect = 0.0099, P = 0.0098
 Identities = 16/39 (41%), Positives = 31/39 (79%), Frame = +1

Query:   176 KAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             +  + ++++   ++EE+EE+EEEEE+EE+E+EEE++  E
Sbjct:   202 RRRRRRRRRRRRKEEEEEEEEEEEEEEEEEEEEEEEGRE 318

 Score = 93 (32.7 bits), Expect = 0.25, P = 0.22
 Identities = 14/39 (35%), Positives = 28/39 (71%), Frame = +1

Query:   176 KAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             +  + ++++        EE+EEEEE+EE+E+EEE++++E
Sbjct:   190 RRRRRRRRRRRRRRRRKEEEEEEEEEEEEEEEEEEEEEE 306

 Score = 88 (31.0 bits), Expect = 1.1, P = 0.66
 Identities = 13/39 (33%), Positives = 28/39 (71%), Frame = +1

Query:   176 KAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             +  + ++++        +E+EEEEE+EE+E+EEE++++E
Sbjct:   187 RRRRRRRRRRRRRRRRRKEEEEEEEEEEEEEEEEEEEEE 303

 Score = 58 (20.4 bits), Expect = 4.8e-06, Sum P(2) = 4.8e-06
 Identities = 16/53 (30%), Positives = 24/53 (45%), Frame = +3

Query:    44 CSERWKTMSAKEKGKFEDMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKR 96
             C    KT S K+K K +   K  K + +++ K     K + KKK K     +R
Sbjct:    87 CERHSKTQSKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRR 245

 Score = 45 (15.8 bits), Expect = 4.8e-05, Sum P(2) = 4.8e-05
 Identities = 14/47 (29%), Positives = 23/47 (48%), Frame = +3

Query:    41 SKKCSERWKTMSAKEKGKFEDMAKADKARYEREMKTYIPPKGETKKK 87
             SK  S++ K    K+K K +   K  K + +++ K     K + KKK
Sbjct:    99 SKTQSKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK 239

 Score = 40 (14.1 bits), Expect = 0.00034, Sum P(2) = 0.00034
 Identities = 13/49 (26%), Positives = 21/49 (42%), Frame = +3

Query:    39 EFSKKCSERWKTMSAKEKGKFEDMAKADKARYEREMKTYIPPKGETKKK 87
             E   K   + K    K+K K +   K  K + +++ K     K + KKK
Sbjct:    90 ERHSKTQSKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK 236


>M17284 Mouse transcriptional control element.
        Length = 309

  Plus Strand HSPs:

 Score = 138 (48.6 bits), Expect = 6.2e-08, P = 6.2e-08
 Identities = 24/47 (51%), Positives = 40/47 (85%), Frame = +1

Query:   168 DAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             D  K    +AE+ ++++EEEE+EE+EE+EEEEE+EE+E+EEE++++E
Sbjct:    67 DLLKSEEEEAEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 207

 Score = 137 (48.2 bits), Expect = 8.0e-08, P = 8.0e-08
 Identities = 22/43 (51%), Positives = 40/43 (93%), Frame = +1

Query:   172 KGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             + ++K+E+ + ++EEEE+EE+EE+EEEEE+EE+E+EEE++++E
Sbjct:    64 RDLLKSEEEEAEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 192

 Score = 136 (47.9 bits), Expect = 1.0e-07, P = 1.0e-07
 Identities = 23/51 (45%), Positives = 43/51 (84%), Frame = +1

Query:   164 KGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             K + + A++   + E+ ++++EEEE+EE+EE+EEEEE+EE+E+EEE++++E
Sbjct:    76 KSEEEEAEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 228

 Score = 133 (46.8 bits), Expect = 2.1e-07, P = 2.1e-07
 Identities = 24/62 (38%), Positives = 47/62 (75%), Frame = +1

Query:   153 KYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDD 212
             K E++ A    + + +  ++   + E+ ++++EEEE+EE+EE+EEEEE+EE+E+EEE+++
Sbjct:    76 KSEEEEAEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 255

Query:   213 DE 214
             +E
Sbjct:   256 EE 261

 Score = 130 (45.8 bits), Expect = 4.9e-07, P = 4.9e-07
 Identities = 21/37 (56%), Positives = 36/37 (97%), Frame = +1

Query:   178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             E+ ++++EEEE+EE+EE+EEEEE+EE+E+EEE++++E
Sbjct:   124 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 234

 Score = 130 (45.8 bits), Expect = 4.9e-07, P = 4.9e-07
 Identities = 21/37 (56%), Positives = 36/37 (97%), Frame = +1

Query:   178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             E+ ++++EEEE+EE+EE+EEEEE+EE+E+EEE++++E
Sbjct:   127 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 237

 Score = 130 (45.8 bits), Expect = 4.9e-07, P = 4.9e-07
 Identities = 21/37 (56%), Positives = 36/37 (97%), Frame = +1

Query:   178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             E+ ++++EEEE+EE+EE+EEEEE+EE+E+EEE++++E
Sbjct:   130 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 240

 Score = 130 (45.8 bits), Expect = 4.9e-07, P = 4.9e-07
 Identities = 21/37 (56%), Positives = 36/37 (97%), Frame = +1

Query:   178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             E+ ++++EEEE+EE+EE+EEEEE+EE+E+EEE++++E
Sbjct:   133 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 243

 Score = 130 (45.8 bits), Expect = 4.9e-07, P = 4.9e-07
 Identities = 21/37 (56%), Positives = 36/37 (97%), Frame = +1

Query:   178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             E+ ++++EEEE+EE+EE+EEEEE+EE+E+EEE++++E
Sbjct:   136 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 246

 Score = 130 (45.8 bits), Expect = 4.9e-07, P = 4.9e-07
 Identities = 21/37 (56%), Positives = 36/37 (97%), Frame = +1

Query:   178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             E+ ++++EEEE+EE+EE+EEEEE+EE+E+EEE++++E
Sbjct:   139 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 249

 Score = 130 (45.8 bits), Expect = 4.9e-07, P = 4.9e-07
 Identities = 21/37 (56%), Positives = 36/37 (97%), Frame = +1

Query:   178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             E+ ++++EEEE+EE+EE+EEEEE+EE+E+EEE++++E
Sbjct:   142 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 252

 Score = 130 (45.8 bits), Expect = 4.9e-07, P = 4.9e-07
 Identities = 21/37 (56%), Positives = 36/37 (97%), Frame = +1

Query:   178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             E+ ++++EEEE+EE+EE+EEEEE+EE+E+EEE++++E
Sbjct:   145 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 255

 Score = 130 (45.8 bits), Expect = 4.9e-07, P = 4.9e-07
 Identities = 21/37 (56%), Positives = 36/37 (97%), Frame = +1

Query:   178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             E+ ++++EEEE+EE+EE+EEEEE+EE+E+EEE++++E
Sbjct:   148 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 258

 Score = 121 (42.6 bits), Expect = 5.8e-06, P = 5.8e-06
 Identities = 21/32 (65%), Positives = 30/32 (93%), Frame = +1

Query:   183 KKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             K EEEE EE+EE+EEEEE+EE+E+EEE++++E
Sbjct:    76 KSEEEEAEEEEEEEEEEEEEEEEEEEEEEEEE 171

 Score = 119 (41.9 bits), Expect = 1.0e-05, P = 1.0e-05
 Identities = 20/33 (60%), Positives = 32/33 (96%), Frame = +1

Query:   178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEED 210
             E+ ++++EEEE+EE+EE+EEEEE+EE+E+EEE+
Sbjct:   163 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 261

 Score = 117 (41.2 bits), Expect = 1.7e-05, P = 1.7e-05
 Identities = 20/32 (62%), Positives = 31/32 (96%), Frame = +1

Query:   178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEE 209
             E+ ++++EEEE+EE+EE+EEEEE+EE+E+EEE
Sbjct:   166 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 261


>S72345 RI beta =cAMP-dependent protein kinase RI beta subunit {exons I and
        Length = 3511

  Minus Strand HSPs:

 Score = 147 (51.7 bits), Expect = 6.2e-08, Sum P(2) = 6.2e-08
 Identities = 26/39 (66%), Positives = 36/39 (92%), Frame = -3

Query:   176 KAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             K E+ ++++EEEE+EE+EE+EEEEE EE+E+EEEDDDDE
Sbjct:   227 KKEEEEEEEEEEEEEEEEEEEEEEEKEEEEEEEEDDDDE 111

 Score = 118 (41.5 bits), Expect = 0.00085, Sum P(2) = 0.00085
 Identities = 20/40 (50%), Positives = 35/40 (87%), Frame = -3

Query:   171 KKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEED 210
             KK   + E+ ++++EEEE+EE+EE++EEEE+EE++D++ED
Sbjct:   227 KKEEEEEEEEEEEEEEEEEEEEEEEKEEEEEEEEDDDDED 108

 Score = 42 (14.8 bits), Expect = 6.2e-08, Sum P(2) = 6.2e-08
 Identities = 12/35 (34%), Positives = 18/35 (51%), Frame = -3

Query:   141 QPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVV 175
             Q Y +   K K+ Y+K     + K K D A+ G+V
Sbjct:   461 QIYNEINNKTKQVYDKINKNNKIK*KKDTAQPGMV 357


>AJ223169 Saccharomyces cerevisiae mRNA for cisplatin-damaged DNA recognition
          Length = 1087

  Plus Strand HSPs:

 Score = 148 (52.1 bits), Expect = 9.7e-08, P = 9.7e-08
 Identities = 40/153 (26%), Positives = 73/153 (47%), Frame = +1

Query:     2 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 61
             K  PK+P    S+Y  ++Q  R +  K++P  ++  +E SK   E+W+ + A  K K+  
Sbjct:   646 KQGPKRPT---SAYFLYLQDHRSQFVKENP--TLRPAEISKIAGEKWQNLEADIKEKYIS 810

Query:    62 MAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSI 121
               K   + Y++            KK+F +   PK+P   F  + +E R ++  +HP  S 
Sbjct:   811 ERKKLYSEYQK-----------AKKEFDEKLPPKKPAGPFIKYANEVRSQVFAQHPDKSQ 957

Query:   122 GDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKY 154
              D+ K +G+ W +     K  Y ++  K  ++Y
Sbjct:   958 LDLMKIIGDKWQSLDQSIKDKYIQEYKKAIQEY 1056

 Score = 132 (46.5 bits), Expect = 1.5e-05, P = 1.5e-05
 Identities = 25/63 (39%), Positives = 38/63 (60%), Frame = +1

Query:    94 PKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEK 153
             PKRP SA+FL+  ++R +   E+P L   +++K  GE W N  AD K+ Y  +  KL  +
Sbjct:   655 PKRPTSAYFLYLQDHRSQFVKENPTLRPAEISKIAGEKWQNLEADIKEKYISERKKLYSE 834

Query:   154 YEK 156
             Y+K
Sbjct:   835 YQK 843


>M73753 Saccharomyces cerevisiae mitochondrial protein gene, complete CDS.
        Length = 1194

  Plus Strand HSPs:

 Score = 148 (52.1 bits), Expect = 1.1e-07, P = 1.1e-07
 Identities = 40/153 (26%), Positives = 73/153 (47%), Frame = +2

Query:     2 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 61
             K  PK+P    S+Y  ++Q  R +  K++P  ++  +E SK   E+W+ + A  K K+  
Sbjct:   344 KQGPKRPT---SAYFLYLQDHRSQFVKENP--TLRPAEISKIAGEKWQNLEADIKEKYIS 508

Query:    62 MAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSI 121
               K   + Y++            KK+F +   PK+P   F  + +E R ++  +HP  S 
Sbjct:   509 ERKKLYSEYQK-----------AKKEFDEKLPPKKPAGPFIKYANEVRSQVFAQHPDKSQ 655

Query:   122 GDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKY 154
              D+ K +G+ W +     K  Y ++  K  ++Y
Sbjct:   656 LDLMKIIGDKWQSLDQSIKDKYIQEYKKAIQEY 754

 Score = 132 (46.5 bits), Expect = 1.6e-05, P = 1.6e-05
 Identities = 25/63 (39%), Positives = 38/63 (60%), Frame = +2

Query:    94 PKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEK 153
             PKRP SA+FL+  ++R +   E+P L   +++K  GE W N  AD K+ Y  +  KL  +
Sbjct:   353 PKRPTSAYFLYLQDHRSQFVKENPTLRPAEISKIAGEKWQNLEADIKEKYISERKKLYSE 532

Query:   154 YEK 156
             Y+K
Sbjct:   533 YQK 541


>X80463 M.musculus HMG1-R-159 gene
        Length = 192

  Plus Strand HSPs:

 Score = 137 (48.2 bits), Expect = 1.3e-07, P = 1.3e-07
 Identities = 25/36 (69%), Positives = 30/36 (83%), Frame = +3

Query:    27 KKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDM 62
             +++ P    NFSEFS KCSERW+TM+AKEKGKFEDM
Sbjct:    81 QEEAPGCFFNFSEFSMKCSERWETMTAKEKGKFEDM 188

 Score = 127 (44.7 bits), Expect = 1.8e-06, P = 1.8e-06
 Identities = 27/37 (72%), Positives = 28/37 (75%), Frame = +1

Query:     1 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNF 37
             GK DPKK RGKMSSYAFF+QT    HKKKH DAS  F
Sbjct:     4 GKKDPKKLRGKMSSYAFFLQTFWV*HKKKHLDASSTF 114


>AB006705 Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone: MTH12.
          Length = 74,877

  Plus Strand HSPs:

 Score = 149 (52.5 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
 Identities = 26/54 (48%), Positives = 46/54 (85%), Frame = +3

Query:   162 RAKGKPD-AAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             ++ G P+ A +  VV+ E+ ++++EEEE+EE+EE+EEEEE+EE+E+EEE++++E
Sbjct: 63516 KSMGSPEEAVEVAVVEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 63677

 Score = 140 (49.3 bits), Expect = 5.6e-06, Sum P(2) = 5.6e-06
 Identities = 26/55 (47%), Positives = 46/55 (83%), Frame = +3

Query:   162 RAKGKPD-AAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE- 214
             ++ G P+ A +  VV+ E+ ++++EEEE+EE+EE+EEEEE+EE+E+EEE++++E 
Sbjct: 63516 KSMGSPEEAVEVAVVEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 63680

 Score = 132 (46.5 bits), Expect = 7.5e-05, Sum P(2) = 7.5e-05
 Identities = 26/59 (44%), Positives = 46/59 (77%), Frame = +3

Query:   162 RAKGKPD-AAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE----- 214
             ++ G P+ A +  VV+ E+ ++++EEEE+EE+EE+EEEEE+EE+E+EEE++++E     
Sbjct: 63516 KSMGSPEEAVEVAVVEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 63692

 Score = 130 (45.8 bits), Expect = 0.00013, Sum P(2) = 0.00013
 Identities = 21/37 (56%), Positives = 36/37 (97%), Frame = +3

Query:   178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             E+ ++++EEEE+EE+EE+EEEEE+EE+E+EEE++++E
Sbjct: 63585 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 63695

 Score = 130 (45.8 bits), Expect = 0.00013, Sum P(2) = 0.00013
 Identities = 21/37 (56%), Positives = 36/37 (97%), Frame = +3

Query:   178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             E+ ++++EEEE+EE+EE+EEEEE+EE+E+EEE++++E
Sbjct: 63588 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 63698

 Score = 130 (45.8 bits), Expect = 0.00013, Sum P(2) = 0.00013
 Identities = 21/37 (56%), Positives = 36/37 (97%), Frame = +3

Query:   178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             E+ ++++EEEE+EE+EE+EEEEE+EE+E+EEE++++E
Sbjct: 63591 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 63701

 Score = 120 (42.2 bits), Expect = 0.0025, Sum P(2) = 0.0025
 Identities = 20/30 (66%), Positives = 30/30 (100%), Frame = +3

Query:   185 EEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             EEEE+EE+EE+EEEEE+EE+E+EEE++++E
Sbjct: 63561 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 63650

 Score = 119 (41.9 bits), Expect = 0.0033, Sum P(2) = 0.0033
 Identities = 20/33 (60%), Positives = 32/33 (96%), Frame = +3

Query:   178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEED 210
             E+ ++++EEEE+EE+EE+EEEEE+EE+E+EEE+
Sbjct: 63603 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 63701

 Score = 100 (35.2 bits), Expect = 0.56, Sum P(2) = 0.43
 Identities = 17/28 (60%), Positives = 27/28 (96%), Frame = +3

Query:   178 EKSKKKKEEEEDEEDEEDEEEEEDEEDE 205
             E+ ++++EEEE+EE+EE+EEEEE+EE+E
Sbjct: 63618 EEEEEEEEEEEEEEEEEEEEEEEEEEEE 63701

 Score = 48 (16.9 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
 Identities = 12/43 (27%), Positives = 22/43 (51%), Frame = +2

Query:    95 KRPPSAFFLFCSEYRPKI---KGEHPGLSIGDVAKKLGEMWNN 134
             K+P S   L CS ++ +I   K ++  +++    + L   WNN
Sbjct: 31100 KKPISCLLLLCSNFQTQILLHKSQNLEINLSADPQLLYLSWNN 31228

 Score = 41 (14.4 bits), Expect = 9.1e-07, Sum P(2) = 9.1e-07
 Identities = 9/21 (42%), Positives = 9/21 (42%), Frame = +3

Query:     5 PKKPRGKMSSYAFFVQTCREE 25
             PK P G      FF  TC  E
Sbjct: 31758 PKLPNGLSKILCFFRNTCSFE 31820


>Z48952;Z71257 S.cerevisiae chromosome XIII cosmid 9916.
            Length = 22,131

  Plus Strand HSPs:

 Score = 148 (52.1 bits), Expect = 2.1e-07, P = 2.1e-07
 Identities = 40/153 (26%), Positives = 73/153 (47%), Frame = +3

Query:     2 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 61
             K  PK+P    S+Y  ++Q  R +  K++P  ++  +E SK   E+W+ + A  K K+  
Sbjct: 15762 KQGPKRPT---SAYFLYLQDHRSQFVKENP--TLRPAEISKIAGEKWQNLEADIKEKYIS 15926

Query:    62 MAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSI 121
               K   + Y++            KK+F +   PK+P   F  + +E R ++  +HP  S 
Sbjct: 15927 ERKKLYSEYQK-----------AKKEFDEKLPPKKPAGPFIKYANEVRSQVFAQHPDKSQ 16073

Query:   122 GDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKY 154
              D+ K +G+ W +     K  Y ++  K  ++Y
Sbjct: 16074 LDLMKIIGDKWQSLDQSIKDKYIQEYKKAIQEY 16172

 Score = 132 (46.5 bits), Expect = 2.8e-05, P = 2.8e-05
 Identities = 25/63 (39%), Positives = 38/63 (60%), Frame = +3

Query:    94 PKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEK 153
             PKRP SA+FL+  ++R +   E+P L   +++K  GE W N  AD K+ Y  +  KL  +
Sbjct: 15771 PKRPTSAYFLYLQDHRSQFVKENPTLRPAEISKIAGEKWQNLEADIKEKYISERKKLYSE 15950

Query:   154 YEK 156
             Y+K
Sbjct: 15951 YQK 15959


>D13491 A.thaliana mRNA for high mobility group protein, complete cds.
        Length = 2114

  Plus Strand HSPs:

 Score = 147 (51.7 bits), Expect = 2.1e-07, P = 2.1e-07
 Identities = 40/115 (34%), Positives = 58/115 (50%), Frame = +2

Query:    54 KEKG-KFEDMAKADKAR-YEREMKTYIPPKGETK----KKFKDPNAPKRPPSAFFLFCSE 107
             KEK  K E   +A  ++    + KT    +G +K    KK KDPNAPKR  S F  F   
Sbjct:  1595 KEKSIKKEPKKEASSSKGLPPKRKTVAADEGSSKRKKPKKKKDPNAPKRAMSGFMFFSQM 1774

Query:   108 YRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYR 162
              R  IK EHPG++ G+V K LG+         K   + +    K++Y+ +I+ Y+
Sbjct:  1775 ERDNIKKEHPGIAFGEVGKVLGDKCVKCLLMIKSHMKPRLQVDKQRYKDEISDYK 1939

 Score = 104 (36.6 bits), Expect = 0.045, P = 0.044
 Identities = 25/80 (31%), Positives = 37/80 (46%), Frame = +2

Query:     2 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 61
             K DP  P+  MS + FF Q  R+  KK+HP   + F E  K   ++        K   + 
Sbjct:  1715 KKDPNAPKRAMSGFMFFSQMERDNIKKEHP--GIAFGEVGKVLGDKCVKCLLMIKSHMKP 1888

Query:    62 MAKADKARYEREMKTYIPPK 81
               + DK RY+ E+  Y  P+
Sbjct:  1889 RLQVDKQRYKDEISDYKNPQ 1948


>AC004155 Mus musculus DNA from BAC 10818 containing the Ercc-4 gene,
          Length = 128,026

  Plus Strand HSPs:

 Score = 148 (52.1 bits), Expect = 2.2e-07, P = 2.2e-07
 Identities = 30/69 (43%), Positives = 51/69 (73%), Frame = +3

Query:   146 KAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDE 205
             KA K +E+ E++    R +G  +  ++     EK +++KEEEE+EE+EE+EEEEE+EE+E
Sbjct: 60027 KAMK*EEEEEEEEKRRRRRGGGEEEEE-----EKRRRRKEEEEEEEEEEEEEEEEEEEEE 60191

Query:   206 DEEEDDDDE 214
             +EEE++++E
Sbjct: 60192 EEEEEEEEE 60218

 Score = 140 (49.3 bits), Expect = 2.8e-06, P = 2.8e-06
 Identities = 23/37 (62%), Positives = 36/37 (97%), Frame = +3

Query:   178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             EK +++KEEEE+EE+EE+EEEEE+EE+E+EEE++++E
Sbjct: 60108 EKRRRRKEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 60218

 Score = 135 (47.5 bits), Expect = 1.2e-05, P = 1.2e-05
 Identities = 27/64 (42%), Positives = 46/64 (71%), Frame = +3

Query:   146 KAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDE 205
             KA K +E+ E++    R +G  +  ++   +  K ++++EEEE+EE+EE+EEEEE+EE+E
Sbjct: 60027 KAMK*EEEEEEEEKRRRRRGGGEEEEEEKRRRRKEEEEEEEEEEEEEEEEEEEEEEEEEE 60206

Query:   206 DEEE 209
             +EEE
Sbjct: 60207 EEEE 60218

 Score = 135 (47.5 bits), Expect = 1.2e-05, P = 1.2e-05
 Identities = 27/67 (40%), Positives = 49/67 (73%), Frame = +3

Query:   146 KAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDE 205
             KA K +E+ E++    R +G  +  ++   +  + +K++EEEE+EE+EE+EEEEE+EE+E
Sbjct: 60027 KAMK*EEEEEEEEKRRRRRGGGEEEEE---EKRRRRKEEEEEEEEEEEEEEEEEEEEEEE 60197

Query:   206 DEEEDDD 212
             +EEE+++
Sbjct: 60198 EEEEEEE 60218

 Score = 43 (15.1 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
 Identities = 12/45 (26%), Positives = 20/45 (44%), Frame = +1

Query:    37 FSE-FSKKCSERWKTMSAKEKGKFEDMAKADKARYEREMKTYIPP 80
             FSE   ++  + WK    + KGK +   K  +     + KT+  P
Sbjct: 59137 FSE*IPRRTKQ*WKMNVPQNKGKTKKTRKQQQQPPPPKKKTFTKP 59271

 Score = 42 (14.8 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
 Identities = 11/39 (28%), Positives = 16/39 (41%), Frame = +2

Query:    58 KFEDMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKR 96
             K +   K  K +    +    PP    K+K KD N P +
Sbjct: 32780 KSKKKKKKKKKKESGSIARQEPPPPPRKRKNKDTNKPTK 32896

 Score = 41 (14.4 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
 Identities = 11/29 (37%), Positives = 13/29 (44%), Frame = +1

Query:    75 KTYIPP-KGETKKKFKDPNAPKRPPSAFF 102
             K  +P  KG+TKK  K    P  P    F
Sbjct: 59176 KMNVPQNKGKTKKTRKQQQQPPPPKKKTF 59262

 Score = 40 (14.1 bits), Expect = 2.8e-06, Sum P(2) = 2.8e-06
 Identities = 12/42 (28%), Positives = 21/42 (50%), Frame = +1

Query:    45 SERWKTMSAKEKGKFEDMAKA----DKARYEREMKTYIPPKG 82
             +E+ K  S   + K +D   A    D  ++ R  +T +PP+G
Sbjct: 38203 TEKPKQKSTISELKNQDTNSAVPHLDNRQHVRRTQTNVPPRG 38328


>U05314 Saccharomyces cerevisiae nuclear polyadenylated RNA-binding protein
        Length = 2499

  Plus Strand HSPs:

 Score = 147 (51.7 bits), Expect = 2.3e-07, P = 2.3e-07
 Identities = 38/113 (33%), Positives = 65/113 (57%), Frame = +3

Query:   117 PGLSIGDVAKKLGEMWNNTAADD----KQPYEKKAAKLKEKYEK--DIAAYRAKGKPDAA 170
             P LS+ D      E+ NN++ADD      P E++ A+ +E+ E+  ++     + + D  
Sbjct:    87 PELSV-DSNSNENELMNNSSADDGIEFDAPEEEREAEREEENEEQHELEDVNDEEEEDKE 263

Query:   171 KKGVVKAEKSKKKKEEEE----------DEEDEEDEEEEEDEEDEDEEEDDDDE 214
             +KG    E    ++EEEE          D++D E+EEEEE+++D+D+++DDDDE
Sbjct:   264 EKGEENGEVINTEEEEEEEHQQKGGNDDDDDDNEEEEEEEEDDDDDDDDDDDDE 425

 Score = 128 (45.1 bits), Expect = 7.0e-05, P = 7.0e-05
 Identities = 35/114 (30%), Positives = 65/114 (57%), Frame = +3

Query:   117 PGLSIGDVAKKLGEMWNNTAADDKQ---PYEKKAAKLKEKYEK--DIAAYRAKGKPDAAK 171
             P LS+   + +   M N++A D  +   P E++ A+ +E+ E+  ++     + + D  +
Sbjct:    87 PELSVDSNSNENELMNNSSADDGIEFDAPEEEREAEREEENEEQHELEDVNDEEEEDKEE 266

Query:   172 KGVVKAEKSKKKKEEEE-----------DEEDEEDEEEEEDEEDEDEEEDDDDE 214
             KG    E    ++EEEE           D+++EE+EEEEED++D+D+++DDD+E
Sbjct:   267 KGEENGEVINTEEEEEEEHQQKGGNDDDDDDNEEEEEEEEDDDDDDDDDDDDEE 428

 Score = 115 (40.5 bits), Expect = 0.0025, P = 0.0025
 Identities = 29/87 (33%), Positives = 52/87 (59%), Frame = +3

Query:   142 PYEKKAAKLKEKYEK--DIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEE--------DEE 191
             P E++ A+ +E+ E+  ++     + + D  +KG    E    ++EEEE        D++
Sbjct:   171 PEEEREAEREEENEEQHELEDVNDEEEEDKEEKGEENGEVINTEEEEEEEHQQKGGNDDD 350

Query:   192 DEEDEEEEEDEEDEDEEEDDDD----E 214
             D+++EEEEE+EED+D+++DDDD    E
Sbjct:   351 DDDNEEEEEEEEDDDDDDDDDDDDEEE 431

 Score = 113 (39.8 bits), Expect = 0.0042, P = 0.0042
 Identities = 29/88 (32%), Positives = 52/88 (59%), Frame = +3

Query:   142 PYEKKAAKLKEKYEK--DIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEE--------DEE 191
             P E++ A+ +E+ E+  ++     + + D  +KG    E    ++EEEE        D++
Sbjct:   171 PEEEREAEREEENEEQHELEDVNDEEEEDKEEKGEENGEVINTEEEEEEEHQQKGGNDDD 350

Query:   192 DEEDEEEEEDEEDEDEEEDDDD-----E 214
             D+++EEEEE+EED+D+++DDDD     E
Sbjct:   351 DDDNEEEEEEEEDDDDDDDDDDDDEEEE 434

 Score = 110 (38.7 bits), Expect = 0.0094, P = 0.0093
 Identities = 21/81 (25%), Positives = 51/81 (62%), Frame = +3

Query:   133 NNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEED 192
             N+   +DK+   ++  ++    E++   ++ KG  D         +  ++++EEE+D++D
Sbjct:   237 NDEEEEDKEEKGEENGEVINTEEEEEEEHQQKGGNDDDDD-----DNEEEEEEEEDDDDD 401

Query:   193 EEDEEEEEDEEDEDEEEDDDD 213
             ++D++++E+EE+E+EEE +D+
Sbjct:   402 DDDDDDDEEEEEEEEEEGNDN 464

 Score = 110 (38.7 bits), Expect = 0.0094, P = 0.0093
 Identities = 21/81 (25%), Positives = 52/81 (64%), Frame = +3

Query:   133 NNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEED 192
             N+   +DK+   ++  ++    E++   ++ KG  D         + +++++EEEED++D
Sbjct:   237 NDEEEEDKEEKGEENGEVINTEEEEEEEHQQKGGNDDDD------DDNEEEEEEEEDDDD 398

Query:   193 EEDEEEEEDEEDEDEEEDDDD 213
             ++D++++++EE+E+EEE+ +D
Sbjct:   399 DDDDDDDDEEEEEEEEEEGND 461

 Score = 105 (37.0 bits), Expect = 0.036, P = 0.035
 Identities = 14/30 (46%), Positives = 30/30 (100%), Frame = +3

Query:   185 EEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             EEEE+EE+++D+++++D++DE+EEE++++E
Sbjct:   363 EEEEEEEEDDDDDDDDDDDDEEEEEEEEEE 452

 Score = 105 (37.0 bits), Expect = 0.036, P = 0.035
 Identities = 18/75 (24%), Positives = 47/75 (62%), Frame = +3

Query:   138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197
             +D    E++  + K +   ++     + + +  +KG    +    ++EEEE+E+D++D++
Sbjct:   228 EDVNDEEEEDKEEKGEENGEVINTEEEEEEEHQQKGGNDDDDDDNEEEEEEEEDDDDDDD 407

Query:   198 EEEDEEDEDEEEDDD 212
             +++D+E+E+EEE+++
Sbjct:   408 DDDDDEEEEEEEEEE 452

 Score = 104 (36.6 bits), Expect = 0.047, P = 0.046
 Identities = 14/30 (46%), Positives = 29/30 (96%), Frame = +3

Query:   185 EEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             + EE+EE+EED+++++D++D+DEEE++++E
Sbjct:   357 DNEEEEEEEEDDDDDDDDDDDDEEEEEEEE 446

 Score = 104 (36.6 bits), Expect = 0.047, P = 0.046
 Identities = 20/80 (25%), Positives = 50/80 (62%), Frame = +3

Query:   133 NNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEED 192
             N+   +DK+   ++  ++    E++   ++ KG  D          + ++++EE++D++D
Sbjct:   237 NDEEEEDKEEKGEENGEVINTEEEEEEEHQQKGGNDDDDDD----NEEEEEEEEDDDDDD 404

Query:   193 EEDEEEEEDEEDEDEEEDDD 212
             ++D+++EE+EE+E+EE +D+
Sbjct:   405 DDDDDDEEEEEEEEEEGNDN 464

 Score = 92 (32.4 bits), Expect = 1.1, P = 0.66
 Identities = 23/91 (25%), Positives = 51/91 (56%), Frame = +3

Query:   133 NNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEED 192
             N+   +DK+   ++  ++    E++   ++ KG  D       + E+ +++ ++++D++D
Sbjct:   237 NDEEEEDKEEKGEENGEVINTEEEEEEEHQQKGGNDDDDDDN-EEEEEEEEDDDDDDDDD 413

Query:   193 EEDEEEEEDEEDEDEE----------EDDDDE 214
             ++DEEEEE+EE+E  +          ED +DE
Sbjct:   414 DDDEEEEEEEEEEGNDNSSVGSDSAAEDGEDE 509

 Score = 87 (30.6 bits), Expect = 4.0, P = 0.98
 Identities = 22/92 (23%), Positives = 48/92 (52%), Frame = +3

Query:   133 NNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKG-KPDAAKKGVVKAEKSKKKKEEEEDEE 191
             N+   +DK+   ++  ++    E++   ++ KG   D       + E+ +   ++++D++
Sbjct:   237 NDEEEEDKEEKGEENGEVINTEEEEEEEHQQKGGNDDDDDDNEEEEEEEEDDDDDDDDDD 416

Query:   192 DEEDEEEEEDEEDEDE---------EEDDDDE 214
             D+E+EEEEE+EE  D          E+ +D+E
Sbjct:   417 DDEEEEEEEEEEGNDNSSVGSDSAAEDGEDEE 512

 Score = 84 (29.6 bits), Expect = 8.8, P = 1.0
 Identities = 21/93 (22%), Positives = 50/93 (53%), Frame = +3

Query:   133 NNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEED 192
             N+   +DK+   ++  ++    E++   ++ KG  D       + E+ ++  ++++D++D
Sbjct:   237 NDEEEEDKEEKGEENGEVINTEEEEEEEHQQKGGNDDDDDDNEEEEEEEEDDDDDDDDDD 416

Query:   193 EEDEEEEEDEED-------------EDEEEDDD 212
             +++EEEEE+EE+             ED E+++D
Sbjct:   417 DDEEEEEEEEEEGNDNSSVGSDSAAEDGEDEED 515


>D37935 Yeast DNA for RNA binding protein, complete cds.
        Length = 2643

  Plus Strand HSPs:

 Score = 147 (51.7 bits), Expect = 2.3e-07, P = 2.3e-07
 Identities = 38/113 (33%), Positives = 65/113 (57%), Frame = +1

Query:   117 PGLSIGDVAKKLGEMWNNTAADD----KQPYEKKAAKLKEKYEK--DIAAYRAKGKPDAA 170
             P LS+ D      E+ NN++ADD      P E++ A+ +E+ E+  ++     + + D  
Sbjct:   214 PELSV-DSNSNENELMNNSSADDGIEFDAPEEEREAEREEENEEQHELEDVNDEEEEDKE 390

Query:   171 KKGVVKAEKSKKKKEEEE----------DEEDEEDEEEEEDEEDEDEEEDDDDE 214
             +KG    E    ++EEEE          D++D E+EEEEE+++D+D+++DDDDE
Sbjct:   391 EKGEENGEVINTEEEEEEEHQQKGGNDDDDDDNEEEEEEEEDDDDDDDDDDDDE 552

 Score = 128 (45.1 bits), Expect = 7.1e-05, P = 7.1e-05
 Identities = 35/114 (30%), Positives = 65/114 (57%), Frame = +1

Query:   117 PGLSIGDVAKKLGEMWNNTAADDKQ---PYEKKAAKLKEKYEK--DIAAYRAKGKPDAAK 171
             P LS+   + +   M N++A D  +   P E++ A+ +E+ E+  ++     + + D  +
Sbjct:   214 PELSVDSNSNENELMNNSSADDGIEFDAPEEEREAEREEENEEQHELEDVNDEEEEDKEE 393

Query:   172 KGVVKAEKSKKKKEEEE-----------DEEDEEDEEEEEDEEDEDEEEDDDDE 214
             KG    E    ++EEEE           D+++EE+EEEEED++D+D+++DDD+E
Sbjct:   394 KGEENGEVINTEEEEEEEHQQKGGNDDDDDDNEEEEEEEEDDDDDDDDDDDDEE 555

 Score = 115 (40.5 bits), Expect = 0.0025, P = 0.0025
 Identities = 29/87 (33%), Positives = 52/87 (59%), Frame = +1

Query:   142 PYEKKAAKLKEKYEK--DIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEE--------DEE 191
             P E++ A+ +E+ E+  ++     + + D  +KG    E    ++EEEE        D++
Sbjct:   298 PEEEREAEREEENEEQHELEDVNDEEEEDKEEKGEENGEVINTEEEEEEEHQQKGGNDDD 477

Query:   192 DEEDEEEEEDEEDEDEEEDDDD----E 214
             D+++EEEEE+EED+D+++DDDD    E
Sbjct:   478 DDDNEEEEEEEEDDDDDDDDDDDDEEE 558

 Score = 113 (39.8 bits), Expect = 0.0043, P = 0.0042
 Identities = 29/88 (32%), Positives = 52/88 (59%), Frame = +1

Query:   142 PYEKKAAKLKEKYEK--DIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEE--------DEE 191
             P E++ A+ +E+ E+  ++     + + D  +KG    E    ++EEEE        D++
Sbjct:   298 PEEEREAEREEENEEQHELEDVNDEEEEDKEEKGEENGEVINTEEEEEEEHQQKGGNDDD 477

Query:   192 DEEDEEEEEDEEDEDEEEDDDD-----E 214
             D+++EEEEE+EED+D+++DDDD     E
Sbjct:   478 DDDNEEEEEEEEDDDDDDDDDDDDEEEE 561

 Score = 110 (38.7 bits), Expect = 0.0095, P = 0.0094
 Identities = 21/81 (25%), Positives = 51/81 (62%), Frame = +1

Query:   133 NNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEED 192
             N+   +DK+   ++  ++    E++   ++ KG  D         +  ++++EEE+D++D
Sbjct:   364 NDEEEEDKEEKGEENGEVINTEEEEEEEHQQKGGNDDDDD-----DNEEEEEEEEDDDDD 528

Query:   193 EEDEEEEEDEEDEDEEEDDDD 213
             ++D++++E+EE+E+EEE +D+
Sbjct:   529 DDDDDDDEEEEEEEEEEGNDN 591

 Score = 110 (38.7 bits), Expect = 0.0095, P = 0.0094
 Identities = 21/81 (25%), Positives = 52/81 (64%), Frame = +1

Query:   133 NNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEED 192
             N+   +DK+   ++  ++    E++   ++ KG  D         + +++++EEEED++D
Sbjct:   364 NDEEEEDKEEKGEENGEVINTEEEEEEEHQQKGGNDDDD------DDNEEEEEEEEDDDD 525

Query:   193 EEDEEEEEDEEDEDEEEDDDD 213
             ++D++++++EE+E+EEE+ +D
Sbjct:   526 DDDDDDDDEEEEEEEEEEGND 588

 Score = 105 (37.0 bits), Expect = 0.036, P = 0.035
 Identities = 14/30 (46%), Positives = 30/30 (100%), Frame = +1

Query:   185 EEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             EEEE+EE+++D+++++D++DE+EEE++++E
Sbjct:   490 EEEEEEEEDDDDDDDDDDDDEEEEEEEEEE 579

 Score = 105 (37.0 bits), Expect = 0.036, P = 0.035
 Identities = 18/75 (24%), Positives = 47/75 (62%), Frame = +1

Query:   138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197
             +D    E++  + K +   ++     + + +  +KG    +    ++EEEE+E+D++D++
Sbjct:   355 EDVNDEEEEDKEEKGEENGEVINTEEEEEEEHQQKGGNDDDDDDNEEEEEEEEDDDDDDD 534

Query:   198 EEEDEEDEDEEEDDD 212
             +++D+E+E+EEE+++
Sbjct:   535 DDDDDEEEEEEEEEE 579

 Score = 104 (36.6 bits), Expect = 0.047, P = 0.046
 Identities = 14/30 (46%), Positives = 29/30 (96%), Frame = +1

Query:   185 EEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             + EE+EE+EED+++++D++D+DEEE++++E
Sbjct:   484 DNEEEEEEEEDDDDDDDDDDDDEEEEEEEE 573

 Score = 104 (36.6 bits), Expect = 0.047, P = 0.046
 Identities = 20/80 (25%), Positives = 50/80 (62%), Frame = +1

Query:   133 NNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEED 192
             N+   +DK+   ++  ++    E++   ++ KG  D          + ++++EE++D++D
Sbjct:   364 NDEEEEDKEEKGEENGEVINTEEEEEEEHQQKGGNDDDDDD----NEEEEEEEEDDDDDD 531

Query:   193 EEDEEEEEDEEDEDEEEDDD 212
             ++D+++EE+EE+E+EE +D+
Sbjct:   532 DDDDDDEEEEEEEEEEGNDN 591

 Score = 92 (32.4 bits), Expect = 1.1, P = 0.67
 Identities = 23/91 (25%), Positives = 51/91 (56%), Frame = +1

Query:   133 NNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEED 192
             N+   +DK+   ++  ++    E++   ++ KG  D       + E+ +++ ++++D++D
Sbjct:   364 NDEEEEDKEEKGEENGEVINTEEEEEEEHQQKGGNDDDDDDN-EEEEEEEEDDDDDDDDD 540

Query:   193 EEDEEEEEDEEDEDEE----------EDDDDE 214
             ++DEEEEE+EE+E  +          ED +DE
Sbjct:   541 DDDEEEEEEEEEEGNDNSSVGSDSAAEDGEDE 636

 Score = 87 (30.6 bits), Expect = 4.1, P = 0.98
 Identities = 22/92 (23%), Positives = 48/92 (52%), Frame = +1

Query:   133 NNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKG-KPDAAKKGVVKAEKSKKKKEEEEDEE 191
             N+   +DK+   ++  ++    E++   ++ KG   D       + E+ +   ++++D++
Sbjct:   364 NDEEEEDKEEKGEENGEVINTEEEEEEEHQQKGGNDDDDDDNEEEEEEEEDDDDDDDDDD 543

Query:   192 DEEDEEEEEDEEDEDE---------EEDDDDE 214
             D+E+EEEEE+EE  D          E+ +D+E
Sbjct:   544 DDEEEEEEEEEEGNDNSSVGSDSAAEDGEDEE 639

 Score = 84 (29.6 bits), Expect = 8.9, P = 1.0
 Identities = 21/93 (22%), Positives = 50/93 (53%), Frame = +1

Query:   133 NNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEED 192
             N+   +DK+   ++  ++    E++   ++ KG  D       + E+ ++  ++++D++D
Sbjct:   364 NDEEEEDKEEKGEENGEVINTEEEEEEEHQQKGGNDDDDDDNEEEEEEEEDDDDDDDDDD 543

Query:   193 EEDEEEEEDEED-------------EDEEEDDD 212
             +++EEEEE+EE+             ED E+++D
Sbjct:   544 DDEEEEEEEEEEGNDNSSVGSDSAAEDGEDEED 642


>M81784 Rattus norvegicus K+ channel mRNA, sequence.
        Length = 2775

  Plus Strand HSPs:

 Score = 146 (51.4 bits), Expect = 3.4e-07, P = 3.4e-07
 Identities = 25/37 (67%), Positives = 36/37 (97%), Frame = +3

Query:   178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             +K KKKKEEEE+EE+EE+EEEEE+EE+E+EEE++++E
Sbjct:  2550 KKKKKKKEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 2660

 Score = 142 (50.0 bits), Expect = 1.2e-06, P = 1.2e-06
 Identities = 24/37 (64%), Positives = 36/37 (97%), Frame = +3

Query:   178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             +K KKK+EEEE+EE+EE+EEEEE+EE+E+EEE++++E
Sbjct:  2553 KKKKKKEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 2663

 Score = 134 (47.2 bits), Expect = 1.3e-05, P = 1.3e-05
 Identities = 22/39 (56%), Positives = 37/39 (94%), Frame = +3

Query:   176 KAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             K +K ++++EEEE+EE+EE+EEEEE+EE+E+EEE++++E
Sbjct:  2556 KKKKKEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 2672

 Score = 134 (47.2 bits), Expect = 1.3e-05, P = 1.3e-05
 Identities = 22/39 (56%), Positives = 37/39 (94%), Frame = +3

Query:   176 KAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             K +K ++++EEEE+EE+EE+EEEEE+EE+E+EEE++++E
Sbjct:  2559 KKKKEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 2675

 Score = 129 (45.4 bits), Expect = 5.5e-05, P = 5.5e-05
 Identities = 23/41 (56%), Positives = 36/41 (87%), Frame = +3

Query:   171 KKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDD 211
             KK   K E+ ++++EEEE+EE+EE+EEEEE+EE+E+EEE++
Sbjct:  2553 KKKKKKEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 2675

 Score = 107 (37.7 bits), Expect = 0.021, P = 0.021
 Identities = 25/58 (43%), Positives = 38/58 (65%), Frame = +3

Query:   157 DIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEE----- 209
             +I AY         KK   + E+ ++++EEEE+EE+EE+EEEEE+EE+E+EEE     
Sbjct:  2517 EILAYSNYFSMKKKKKKKEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEKKKKK 2690

 Score = 104 (36.6 bits), Expect = 0.048, P = 0.047
 Identities = 24/56 (42%), Positives = 38/56 (67%), Frame = +3

Query:   171 KKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDD------------E 214
             KK   K E+ ++++EEEE+EE+EE+EEEEE+EE+E+EEE+++             E
Sbjct:  2550 KKKKKKKEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEKKKKKKKKKKKKKE 2717

 Score = 87 (30.6 bits), Expect = 4.1, P = 0.98
 Identities = 25/68 (36%), Positives = 38/68 (55%), Frame = +3

Query:   157 DIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEE------- 209
             +I AY         KK   + E+ ++++EEEE+EE+EE+EEEEE+EE+E+EEE       
Sbjct:  2517 EILAYSNYFSMKKKKKKKEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEKKKKKKK 2696

Query:   210 -------- 209
                     
Sbjct:  2697 KKKKKKEK 2720

 Score = 85 (29.9 bits), Expect = 6.8, P = 1.0
 Identities = 25/69 (36%), Positives = 38/69 (55%), Frame = +3

Query:   157 DIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEE------- 209
             +I AY         KK   + E+ ++++EEEE+EE+EE+EEEEE+EE+E+EEE       
Sbjct:  2517 EILAYSNYFSMKKKKKKKEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEKKKKKKK 2696

Query:   210 --------- 209
                      
Sbjct:  2697 KKKKKKEKK 2723


>A12522 Ag169 clone
        Length = 843

  Minus Strand HSPs:

 Score = 143 (50.3 bits), Expect = 3.5e-07, P = 3.5e-07
 Identities = 36/99 (36%), Positives = 61/99 (61%), Frame = -1

Query:   111 KIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKE-KYEKDIAAYRAKGKPDA 169
             K K E   LSI +  + +G +        +  ++KK AK++E + +K     + + K + 
Sbjct:   288 KSKVEEKNLSIQE--QLIGTIGRVNVVPRRDNHKKKMAKIEEAELQKQKHVDKEEDKKEE 115

Query:   170 AKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEE 209
             +K+  V+ E  + +++EEE EEDEE+EEEEE+EE+E+EEE
Sbjct:   114 SKE--VQEESKEVQEDEEEVEEDEEEEEEEEEEEEEEEEE 1

 Score = 140 (49.3 bits), Expect = 9.2e-07, P = 9.2e-07
 Identities = 62/205 (30%), Positives = 101/205 (49%), Frame = -1

Query:    25 EHKK-KHPDASVNFSEFSKK--CSERWKTMSAKEKGKFEDMAKADKARYEREMKTYIPPK 81
             EHK+ +H +      E  K+   S+  K+   K+KGK +D  K  KA+ E+  K  +   
Sbjct:   615 EHKEGEHKEEEHKEEEHKKEEHKSKEHKSKGKKDKGK-KDKGKHKKAKKEKVKKHVVKNV 439

Query:    82 GETKKK-------FKDPNA--------PKRP---PSAFFLFCSEY---RPKIKGEHPGLS 120
              E + K        +D  A          RP   P    +   E      K K E   LS
Sbjct:   438 IEDEDKDGVEIINLEDKEACEEQHITVESRPLSQPQCKLIDEPEQLTLMDKSKVEEKNLS 259

Query:   121 IGDVAKKLGEMWNNTAADDKQPYEKKAAKLKE-KYEKDIAAYRAKGKPDAAKKGVVKAEK 179
             I +  + +G +        +  ++KK AK++E + +K     + + K + +K      E 
Sbjct:   258 IQE--QLIGTIGRVNVVPRRDNHKKKMAKIEEAELQKQKHVDKEEDKKEESK------EV 103

Query:   180 SKKKKEEEEDEED-EEDEEEEEDEEDEDEEEDDD 212
              ++ KE +EDEE+ EEDEEEEE+EE+E+EEE+++
Sbjct:   102 QEESKEVQEDEEEVEEDEEEEEEEEEEEEEEEEE 1

 Score = 127 (44.7 bits), Expect = 4.4e-05, P = 4.4e-05
 Identities = 62/203 (30%), Positives = 100/203 (49%), Frame = -1

Query:    25 EHKK-KHPDASVNFSEFSKK--CSERWKTMSAKEKGKFEDMAKADKARYEREMKTYIPPK 81
             EHK+ +H +      E  K+   S+  K+   K+KGK +D  K  KA+ E+  K  +   
Sbjct:   615 EHKEGEHKEEEHKEEEHKKEEHKSKEHKSKGKKDKGK-KDKGKHKKAKKEKVKKHVVKNV 439

Query:    82 GETKKK-------FKDPNA--------PKRP---PSAFFLFCSEY---RPKIKGEHPGLS 120
              E + K        +D  A          RP   P    +   E      K K E   LS
Sbjct:   438 IEDEDKDGVEIINLEDKEACEEQHITVESRPLSQPQCKLIDEPEQLTLMDKSKVEEKNLS 259

Query:   121 IGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKS 180
             I +  + +G +        +  ++KK AK++E       A   K K     K   K E+S
Sbjct:   258 IQE--QLIGTIGRVNVVPRRDNHKKKMAKIEE-------AELQKQKH--VDKEEDKKEES 112

Query:   181 KKKKEEEED-EEDEEDEEEEEDEEDEDEEEDDDDE 214
             K+ +EE ++ +EDEE+ EE+E+EE+E+EEE++++E
Sbjct:   111 KEVQEESKEVQEDEEEVEEDEEEEEEEEEEEEEEE 7


>X76589 H.sapiens DNA 3' flanking simple sequence region clone wg2c3.
        Length = 236

  Plus Strand HSPs:

 Score = 132 (46.5 bits), Expect = 3.7e-07, P = 3.7e-07
 Identities = 30/51 (58%), Positives = 41/51 (80%), Frame = +1

Query:   164 KGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDE-EEEEDEEDEDEEEDDDDE 214
             KGK +A K G  KAEK +++KEEEE+EE+EE+  EEEE EE+E EEE++ +E
Sbjct:    13 KGKXEA-KAGA-KAEKEEEEKEEEEEEEEEEEAAEEEEAEEEEAEEEEEAEE 162

 Score = 118 (41.5 bits), Expect = 1.8e-05, P = 1.8e-05
 Identities = 24/70 (34%), Positives = 43/70 (61%), Frame = +1

Query:   145 KKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEED 204
             K  AK   K EK+      + + +  ++   + E  +++ EEEE+ E+EE+ EEEE+ E+
Sbjct:    19 KXEAKAGAKAEKEEEEKEEEEEEEEEEEAAEEEEAEEEEAEEEEEAEEEEEAEEEEEAEE 198

Query:   205 EDEEEDDDDE 214
             E+EEE+++ E
Sbjct:   199 EEEEEEEEAE 228

 Score = 116 (40.8 bits), Expect = 3.0e-05, P = 3.0e-05
 Identities = 24/48 (50%), Positives = 36/48 (75%), Frame = +1

Query:   168 DAAKKGVVKAEK-SKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             D + KG  +A+  +K +KEEEE EE+EE+EEEEE  E+E+ EE++ +E
Sbjct:     1 DLSVKGKXEAKAGAKAEKEEEEKEEEEEEEEEEEAAEEEEAEEEEAEE 144

 Score = 116 (40.8 bits), Expect = 3.0e-05, P = 3.0e-05
 Identities = 26/72 (36%), Positives = 48/72 (66%), Frame = +1

Query:   140 KQPYEKKA-AKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEE 198
             K   E KA AK +++ E+       + + +AA++   + E++++++E EE+EE EE+EE 
Sbjct:    13 KGKXEAKAGAKAEKEEEEKEEEEEEEEEEEAAEEEEAEEEEAEEEEEAEEEEEAEEEEEA 192

Query:   199 EEDEEDEDEEED 210
             EE+EE+E+EE +
Sbjct:   193 EEEEEEEEEEAE 228

 Score = 115 (40.5 bits), Expect = 3.9e-05, P = 3.9e-05
 Identities = 26/71 (36%), Positives = 44/71 (61%), Frame = +1

Query:   145 KKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEED-EEDEEDEEEEEDEE 203
             K  AK   K EK+      + + +  ++   + E  +++ EEEE+ EE+EE EEEEE EE
Sbjct:    19 KXEAKAGAKAEKEEEEKEEEEEEEEEEEAAEEEEAEEEEAEEEEEAEEEEEAEEEEEAEE 198

Query:   204 DEDEEEDDDDE 214
             +E+EEE++ ++
Sbjct:   199 EEEEEEEEAEK 231

 Score = 106 (37.3 bits), Expect = 0.00043, P = 0.00043
 Identities = 25/64 (39%), Positives = 43/64 (67%), Frame = +1

Query:   145 KKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEED 204
             +K  + KE+ E++     A  + +A ++   +AE+ ++ +EEEE EE+EE EEEEE+EE+
Sbjct:    49 EKEEEEKEEEEEEEEEEEAAEEEEAEEE---EAEEEEEAEEEEEAEEEEEAEEEEEEEEE 219

Query:   205 EDEE 208
             E E+
Sbjct:   220 EAEK 231


>E10125 DNA encoding an immunogenicity protein.
        Length = 2069

  Plus Strand HSPs:

 Score = 145 (51.0 bits), Expect = 4.2e-07, P = 4.2e-07
 Identities = 30/77 (38%), Positives = 52/77 (67%), Frame = +1

Query:   138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197
             ++++  E+K     E+ EK       K   +  +K + + E+ ++ +EEEE+EE+EE+EE
Sbjct:  1441 EEEEEEEEKVTH--EEEEKVTHEEEEKVTHEEEEKVIHEEEEKEEDEEEEEEEEEEEEEE 1614

Query:   198 EEEDEEDEDEEEDDDDE 214
             EEEDEE+E+EEE+D++E
Sbjct:  1615 EEEDEEEEEEEEEDEEE 1665

 Score = 143 (50.3 bits), Expect = 8.2e-07, P = 8.2e-07
 Identities = 28/77 (36%), Positives = 53/77 (68%), Frame = +1

Query:   138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197
             ++K  +E++     E+ EK I     K + +  ++   + E+ +++++EEE+EE+EEDEE
Sbjct:  1483 EEKVTHEEEEKVTHEEEEKVIHEEEEKEEDEEEEEEEEEEEEEEEEEDEEEEEEEEEDEE 1662

Query:   198 EEEDEEDEDEEEDDDDE 214
             EEE+EE+E+EEE+++ E
Sbjct:  1663 EEEEEENEEEEEEENKE 1713

 Score = 140 (49.3 bits), Expect = 2.1e-06, P = 2.1e-06
 Identities = 30/72 (41%), Positives = 47/72 (65%), Frame = +1

Query:   144 EKKAAKLKEKYEKDIAAYRAKGK-PDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDE 202
             E+K    +E+ E++   +  + K     ++ V   E+ K   EEEE EEDEE+EEEEE+E
Sbjct:  1423 EEKVTYEEEEEEEEKVTHEEEEKVTHEEEEKVTHEEEEKVIHEEEEKEEDEEEEEEEEEE 1602

Query:   203 EDEDEEEDDDDE 214
             E+E+EEED+++E
Sbjct:  1603 EEEEEEEDEEEE 1638

 Score = 119 (41.9 bits), Expect = 0.00079, P = 0.00079
 Identities = 25/77 (32%), Positives = 46/77 (59%), Frame = +1

Query:   138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197
             ++K  +E++     E+ E++      + +     +   K    +++K   E+EE EEDEE
Sbjct:  1399 EEKVTHEEEEKVTYEEEEEEEEKVTHEEEEKVTHEEEEKVTHEEEEKVIHEEEEKEEDEE 1578

Query:   198 EEEDEEDEDEEEDDDDE 214
             EEE+EE+E+EEE+++DE
Sbjct:  1579 EEEEEEEEEEEEEEEDE 1629

 Score = 116 (40.8 bits), Expect = 0.0018, P = 0.0018
 Identities = 28/89 (31%), Positives = 54/89 (60%), Frame = +1

Query:   138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197
             ++K  +E++     E+ EK I     K + +  ++   + E+ +++++EEE+EE+EEDEE
Sbjct:  1483 EEKVTHEEEEKVTHEEEEKVIHEEEEKEEDEEEEEEEEEEEEEEEEEDEEEEEEEEEDEE 1662

Query:   198 EEEDEEDEDEEEDD------------DDE 214
             EEE+EE+E+EEE++            ++E
Sbjct:  1663 EEEEEENEEEEEEENKEEEEEEKEEHEEE 1749

 Score = 115 (40.5 bits), Expect = 0.0024, P = 0.0024
 Identities = 23/81 (28%), Positives = 54/81 (66%), Frame = +1

Query:   138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197
             ++K  +E++   + E+ EK+      + + +  ++   + E+ ++++EE+E+EE+EE+ E
Sbjct:  1507 EEKVTHEEEEKVIHEEEEKEEDEEEEEEEEEEEEEEEEEDEEEEEEEEEDEEEEEEEENE 1686

Query:   198 EEEDEEDEDEEEDD----DDE 214
             EEE+EE+++EEE++    ++E
Sbjct:  1687 EEEEEENKEEEEEEKEEHEEE 1749

 Score = 103 (36.3 bits), Expect = 0.058, P = 0.056
 Identities = 21/74 (28%), Positives = 50/74 (67%), Frame = +1

Query:   144 EKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEE 203
             E++  + +E+ E++      + + D  ++   + ++ ++++EE E+EE+EE++EEEE+E+
Sbjct:  1552 EEEKEEDEEEEEEEEEEEEEEEEEDEEEEEEEEEDEEEEEEEENEEEEEEENKEEEEEEK 1731

Query:   204 DEDEEE---DDDDE 214
             +E EEE   ++++E
Sbjct:  1732 EEHEEEVTHEEEEE 1773

 Score = 97 (34.1 bits), Expect = 0.28, P = 0.25
 Identities = 20/75 (26%), Positives = 50/75 (66%), Frame = +1

Query:   144 EKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEE 203
             E++  + +E+ E++      + + D  ++   + ++ ++++EE E+EE+EE++EEEE+E+
Sbjct:  1552 EEEKEEDEEEEEEEEEEEEEEEEEDEEEEEEEEEDEEEEEEEENEEEEEEENKEEEEEEK 1731

Query:   204 DEDEEE----DDDDE 214
             +E EEE    +++++
Sbjct:  1732 EEHEEEVTHEEEEEK 1776

 Score = 93 (32.7 bits), Expect = 0.80, P = 0.55
 Identities = 22/77 (28%), Positives = 45/77 (58%), Frame = +1

Query:   138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197
             +D++  E++  + +E+ E+D      + + +  ++     E+ +++ +EEE+EE EE EE
Sbjct:  1567 EDEEEEEEEEEEEEEEEEEDEEEEEEEEEDEEEEEEEENEEEEEEENKEEEEEEKEEHEE 1746

Query:   198 E---EEDEEDEDEEEDD 211
             E   EE+EE    EE++
Sbjct:  1747 EVTHEEEEEKVTHEEEE 1797

 Score = 90 (31.7 bits), Expect = 1.8, P = 0.83
 Identities = 20/72 (27%), Positives = 41/72 (56%), Frame = +1

Query:   138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197
             ++K  +E++  ++  + EK+   +  + K    ++  V  E+ +K   EEE+EE+E+   
Sbjct:  1297 EEKVTHEEEKEEVTHEEEKEEVTHEEEEKVTHEEEEKVTHEEEEKVTYEEEEEEEEKVTH 1476

Query:   198 EEEDEEDEDEEE 209
             EEE++   +EEE
Sbjct:  1477 EEEEKVTHEEEE 1512


>M10296 Mouse DNA with homology to EBV IR3 repeat, segment 1, clone Mu2.
        Length = 460

  Plus Strand HSPs:

 Score = 129 (45.4 bits), Expect = 4.4e-07, P = 4.4e-07
 Identities = 26/92 (28%), Positives = 56/92 (60%), Frame = +3

Query:   123 DVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKK 182
             D  K+ G+       +++   EKK  + +EK ++       + + +  ++G  + E+ ++
Sbjct:    21 DKQKEEGKEEEEEEKEEEGEEEKKEEEEEEKEKEKEEEEGEEEEEEQEEEGEQEQEQEEE 200

Query:   183 KKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             ++E+EE EE+EE E+EEE+E++E EE++ ++E
Sbjct:   201 EQEQEEQEEEEEQEQEEEEEQEEQEEQEQEEE 296

 Score = 128 (45.1 bits), Expect = 5.8e-07, P = 5.8e-07
 Identities = 25/76 (32%), Positives = 51/76 (67%), Frame = +3

Query:   139 DKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEE 198
             +++  EK+  K +E+ E++      +G+ +  ++   + E+ ++++EEEE++E EE+EE+
Sbjct:    93 EEEEEEKEKEKEEEEGEEEEEEQEEEGEQEQEQE---EEEQEQEEQEEEEEQEQEEEEEQ 263

Query:   199 EEDEEDEDEEEDDDDE 214
             EE EE E EEE++ +E
Sbjct:   264 EEQEEQEQEEEEEQEE 311

 Score = 128 (45.1 bits), Expect = 5.8e-07, P = 5.8e-07
 Identities = 29/108 (26%), Positives = 63/108 (58%), Frame = +3

Query:   107 EYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGK 166
             E + K K E  G    +  ++ GE       ++++  E++  + +E+ E++    + + +
Sbjct:   105 EEKEKEKEEEEGEEEEEEQEEEGEQEQEQEEEEQEQEEQEEEEEQEQEEEEEQEEQEEQE 284

Query:   167 PDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
              +  ++   + E+ ++++EEE++EE EE EEEE++EE E EEE+ ++E
Sbjct:   285 QEEEEEQE-EQEEQEQEEEEEQEEEGEEQEEEEQEEEQEQEEEEQEEE 425

 Score = 122 (42.9 bits), Expect = 3.0e-06, P = 3.0e-06
 Identities = 27/110 (24%), Positives = 65/110 (59%), Frame = +3

Query:   107 EYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGK 166
             E + K K E  G    +  ++ GE       ++++  E++  + +E+ E++    + + +
Sbjct:   105 EEKEKEKEEEEGEEEEEEQEEEGEQEQEQEEEEQEQEEQEEEEEQEQEEEEEQEEQEEQE 284

Query:   167 PDAAKKGVVKAEKSKKKKEEEEDE--EDEEDEEEEEDEEDEDEEEDDDDE 214
              +  ++   + E+ ++++EE+E+E  E EE+E+EEE E++E+E+E++ +E
Sbjct:   285 QEEEEEQEEQEEQEQEEEEEQEEEGEEQEEEEQEEEQEQEEEEQEEEGEE 434

 Score = 119 (41.9 bits), Expect = 6.8e-06, P = 6.8e-06
 Identities = 28/112 (25%), Positives = 64/112 (57%), Frame = +3

Query:   107 EYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGK 166
             E + K K E  G    +  ++ GE       ++++  E++  + +E+ E++    + + +
Sbjct:   105 EEKEKEKEEEEGEEEEEEQEEEGEQEQEQEEEEQEQEEQEEEEEQEQEEEEEQEEQEEQE 284

Query:   167 PDAAKKGVVKAEKSKKKKEEEEDE----EDEEDEEEEEDEEDEDEEEDDDDE 214
              +  ++   + E+ ++++EE+E+E    E+EE EEE+E EE+E EEE ++++
Sbjct:   285 QEEEEEQEEQEEQEQEEEEEQEEEGEEQEEEEQEEEQEQEEEEQEEEGEEEQ 440

 Score = 110 (38.7 bits), Expect = 0.00015, P = 0.00015
 Identities = 20/77 (25%), Positives = 49/77 (63%), Frame = +3

Query:   138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197
             +++Q  E++  + +++ ++       + + +  ++   + E+  +++EEEE EE++E EE
Sbjct:   228 EEEQEQEEEEEQEEQEEQEQEEEEEQEEQEEQEQEEEEEQEEEGEEQEEEEQEEEQEQEE 407

Query:   198 EEEDEEDEDEEEDDDDE 214
             EE++EE E+E+E + +E
Sbjct:   408 EEQEEEGEEEQEQEQEE 458

 Score = 108 (38.0 bits), Expect = 0.00064, P = 0.00064
 Identities = 19/44 (43%), Positives = 35/44 (79%), Frame = +3

Query:   171 KKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             ++G  + E+ K+++ EEE +E+EE+E+E+E EE+E EEE+++ E
Sbjct:    33 EEGKEEEEEEKEEEGEEEKKEEEEEEKEKEKEEEEGEEEEEEQE 164

 Score = 108 (38.0 bits), Expect = 0.00064, P = 0.00064
 Identities = 19/77 (24%), Positives = 49/77 (63%), Frame = +3

Query:   138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197
             ++++  E++  + +E+ E+       + +    ++   + E+ ++ +E+EE+E++EE E+
Sbjct:   222 EEEEEQEQEEEEEQEEQEEQEQEEEEEQEEQEEQEQEEEEEQEEEGEEQEEEEQEEEQEQ 401

Query:   198 EEEDEEDEDEEEDDDDE 214
             EEE++E+E EEE + ++
Sbjct:   402 EEEEQEEEGEEEQEQEQ 452

 Score = 106 (37.3 bits), Expect = 0.0017, P = 0.0017
 Identities = 18/44 (40%), Positives = 35/44 (79%), Frame = +3

Query:   171 KKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             +K  +  +K + K+EEEE++E+E +EE++E+EE+E E+E +++E
Sbjct:     6 RKPCLDKQKEEGKEEEEEEKEEEGEEEKKEEEEEEKEKEKEEEE 137


>AL009197 S.pombe chromosome I cosmid c10F6.
          Length = 38,139

  Minus Strand HSPs:

 Score = 142 (50.0 bits), Expect = 1.5e-06, P = 1.5e-06
 Identities = 54/186 (29%), Positives = 92/186 (49%), Frame = -3

Query:    36 NFSEFSKKCSERWKTMSAKEK---GKFEDMAKADKARYEREMKTY-IP-P-----KGETK 85
             N SE S K S   +   A        FE   +  +++ E+   T  IP P     K E+ 
Sbjct: 17092 NTSEISHKSSNNSQPKDASVNDTDADFEQQNQVVQSKDEKITNTDPIPSPIITNLKTESS 16913

Query:    86 K----KFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKK-LGEMWNNTAADDK 140
             K    K    NA       F  F S  +PK+K E   L  G   KK L + WNN   ++K
Sbjct: 16912 KSSGAKKATSNAKITDTMLFNHFSSIQKPKLKAEGSTLK-GQALKKTLEDTWNNLTEEEK 16736

Query:   141 QPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEE 200
             +PY +     +EK  +   A R +   ++AK   ++ EK+K+K+++++ E+D   ++ + 
Sbjct: 16735 KPYHEGLLAAREKARE---ARRRRSAQNSAK---LEKEKAKEKQKDKDQEQDTVSDKNQI 16574

Query:   201 DEEDEDEEEDDDD 213
             DE ++ ++E D++
Sbjct: 16573 DEIEKGQKEVDEE 16535

 Score = 140 (49.3 bits), Expect = 4.4e-07, Sum P(2) = 4.4e-07
 Identities = 36/122 (29%), Positives = 67/122 (54%), Frame = -3

Query:    92 NAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKK-LGEMWNNTAADDKQPYEKKAAKL 150
             NA       F  F S  +PK+K E   L  G   KK L + WNN   ++K+PY +     
Sbjct: 16882 NAKITDTMLFNHFSSIQKPKLKAEGSTLK-GQALKKTLEDTWNNLTEEEKKPYHEGLLAA 16706

Query:   151 KEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEED 210
             +EK  +   A R +   ++AK   ++ EK+K+K+++++ E+D   ++ + DE ++ ++E 
Sbjct: 16705 REKARE---ARRRRSAQNSAK---LEKEKAKEKQKDKDQEQDTVSDKNQIDEIEKGQKEV 16544

Query:   211 DDD 213
             D++
Sbjct: 16543 DEE 16535

 Score = 56 (19.7 bits), Expect = 4.4e-07, Sum P(2) = 4.4e-07
 Identities = 15/47 (31%), Positives = 27/47 (57%), Frame = -2

Query:    29 KHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARYEREMK 75
             KH + ++ +S+   KCS+  KT S   K K +D    DK + ++++K
Sbjct: 36632 KHWN*TMPYSQNRDKCSDNKKT-SEPYK-KLQDRTTVDKGK*KKDLK 36498

 Score = 42 (14.8 bits), Expect = 5.5e-07, Sum P(3) = 5.5e-07
 Identities = 7/23 (30%), Positives = 14/23 (60%), Frame = -1

Query:    73 EMKTYIPPKGETKKKFKDPNAPK 95
             ++ TY P +    +K+ +PN P+
Sbjct: 21675 KIDTYTP*RRHATRKYFNPNQPQ 21607


>Z50100 H.vulgare GAA-satellite DNA
        Length = 334

  Plus Strand HSPs:

 Score = 130 (45.8 bits), Expect = 4.5e-07, P = 4.5e-07
 Identities = 21/37 (56%), Positives = 36/37 (97%), Frame = +2

Query:   178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             E+ ++++EEEE+EE+EE+EEEEE+EE+E+EEE++++E
Sbjct:    50 EEEEEEQEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 160

 Score = 130 (45.8 bits), Expect = 4.5e-07, P = 4.5e-07
 Identities = 21/37 (56%), Positives = 36/37 (97%), Frame = +2

Query:   178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             E+ ++++EEEE+EE+EE+EEEEE+EE+E+EEE++++E
Sbjct:    53 EEEEEQEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 163

 Score = 130 (45.8 bits), Expect = 4.5e-07, P = 4.5e-07
 Identities = 21/37 (56%), Positives = 36/37 (97%), Frame = +2

Query:   178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             E+ ++++EEEE+EE+EE+EEEEE+EE+E+EEE++++E
Sbjct:    56 EEEEQEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 166

 Score = 130 (45.8 bits), Expect = 4.5e-07, P = 4.5e-07
 Identities = 21/37 (56%), Positives = 36/37 (97%), Frame = +2

Query:   178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             E+ ++++EEEE+EE+EE+EEEEE+EE+E+EEE++++E
Sbjct:    59 EEEQEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 169

 Score = 130 (45.8 bits), Expect = 4.5e-07, P = 4.5e-07
 Identities = 21/37 (56%), Positives = 36/37 (97%), Frame = +2

Query:   178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             E+ ++++EEEE+EE+EE+EEEEE+EE+E+EEE++++E
Sbjct:    62 EEQEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 172

 Score = 130 (45.8 bits), Expect = 4.5e-07, P = 4.5e-07
 Identities = 21/37 (56%), Positives = 36/37 (97%), Frame = +2

Query:   178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             E+ ++++EEEE+EE+EE+EEEEE+EE+E+EEE++++E
Sbjct:    65 EQEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 175

 Score = 130 (45.8 bits), Expect = 4.5e-07, P = 4.5e-07
 Identities = 21/37 (56%), Positives = 36/37 (97%), Frame = +2

Query:   178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             E+ ++++EEEE+EE+EE+EEEEE+EE+E+EEE++++E
Sbjct:    71 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 181

 Score = 130 (45.8 bits), Expect = 4.5e-07, P = 4.5e-07
 Identities = 21/37 (56%), Positives = 36/37 (97%), Frame = +2

Query:   178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             E+ ++++EEEE+EE+EE+EEEEE+EE+E+EEE++++E
Sbjct:    74 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 184

 Score = 130 (45.8 bits), Expect = 4.5e-07, P = 4.5e-07
 Identities = 21/37 (56%), Positives = 36/37 (97%), Frame = +2

Query:   178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             E+ ++++EEEE+EE+EE+EEEEE+EE+E+EEE++++E
Sbjct:    77 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 187

 Score = 130 (45.8 bits), Expect = 4.5e-07, P = 4.5e-07
 Identities = 21/37 (56%), Positives = 36/37 (97%), Frame = +2

Query:   178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             E+ ++++EEEE+EE+EE+EEEEE+EE+E+EEE++++E
Sbjct:    80 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 190

 Score = 130 (45.8 bits), Expect = 4.5e-07, P = 4.5e-07
 Identities = 21/37 (56%), Positives = 36/37 (97%), Frame = +2

Query:   178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             E+ ++++EEEE+EE+EE+EEEEE+EE+E+EEE++++E
Sbjct:    83 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 193

 Score = 127 (44.7 bits), Expect = 1.0e-06, P = 1.0e-06
 Identities = 20/37 (54%), Positives = 36/37 (97%), Frame = +2

Query:   178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             ++ ++++EEEE+EE+EE+EEEEE+EE+E+EEE++++E
Sbjct:    68 QEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 178

 Score = 125 (44.0 bits), Expect = 1.8e-06, P = 1.8e-06
 Identities = 23/76 (30%), Positives = 54/76 (71%), Frame = +2

Query:   139 DKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEE 198
             +++  E++  + +E+ E++      + + +  ++   + E+ ++++EEEE+EE+EE+EEE
Sbjct:     2 EEEEEEEEEEEEEEE*EEEEEEQEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 181

Query:   199 EEDEEDEDEEEDDDDE 214
             EE+E +E+EEE++++E
Sbjct:   182 EEEE*EEEEEEEEEEE 229

 Score = 124 (43.7 bits), Expect = 2.4e-06, P = 2.4e-06
 Identities = 21/37 (56%), Positives = 35/37 (94%), Frame = +2

Query:   178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             E+ ++++EEEE+EE+EE+EEEEE+EE+E+EEE+++ E
Sbjct:    89 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE*E 199

 Score = 124 (43.7 bits), Expect = 2.4e-06, P = 2.4e-06
 Identities = 21/37 (56%), Positives = 35/37 (94%), Frame = +2

Query:   178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             E+ ++++EEEE+EE+EE+EEEEE+EE+E+EEE++ +E
Sbjct:    92 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE*EE 202

 Score = 124 (43.7 bits), Expect = 2.4e-06, P = 2.4e-06
 Identities = 21/37 (56%), Positives = 35/37 (94%), Frame = +2

Query:   178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             E+ ++++EEEE+EE+EE+EEEEE+EE+E+EEE +++E
Sbjct:    98 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE*EEEE 208

 Score = 124 (43.7 bits), Expect = 2.4e-06, P = 2.4e-06
 Identities = 21/37 (56%), Positives = 35/37 (94%), Frame = +2

Query:   178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             E+ ++++EEEE+EE+EE+EEEEE+EE+E EEE++++E
Sbjct:   110 EEEEEEEEEEEEEEEEEEEEEEEEEEEE*EEEEEEEE 220

 Score = 124 (43.7 bits), Expect = 2.4e-06, P = 2.4e-06
 Identities = 21/37 (56%), Positives = 35/37 (94%), Frame = +2

Query:   178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             E+ ++++EEEE+EE+EE+EEEEE+EE E+EEE++++E
Sbjct:   116 EEEEEEEEEEEEEEEEEEEEEEEEEE*EEEEEEEEEE 226

 Score = 123 (43.3 bits), Expect = 3.2e-06, P = 3.2e-06
 Identities = 21/37 (56%), Positives = 34/37 (91%), Frame = +2

Query:   178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             E+ + ++EEEE EE+EE+EEEEE+EE+E+EEE++++E
Sbjct:    35 EEEE*EEEEEEQEEEEEEEEEEEEEEEEEEEEEEEEE 145

 Score = 123 (43.3 bits), Expect = 3.2e-06, P = 3.2e-06
 Identities = 20/37 (54%), Positives = 36/37 (97%), Frame = +2

Query:   178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             E+ ++++EE+E+EE+EE+EEEEE+EE+E+EEE++++E
Sbjct:    41 EE*EEEEEEQEEEEEEEEEEEEEEEEEEEEEEEEEEE 151

 Score = 122 (42.9 bits), Expect = 4.1e-06, P = 4.1e-06
 Identities = 20/37 (54%), Positives = 35/37 (94%), Frame = +2

Query:   178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             E+ +++ EEEE+E++EE+EEEEE+EE+E+EEE++++E
Sbjct:    29 EEEEEE*EEEEEEQEEEEEEEEEEEEEEEEEEEEEEE 139

 Score = 122 (42.9 bits), Expect = 4.1e-06, P = 4.1e-06
 Identities = 20/37 (54%), Positives = 35/37 (94%), Frame = +2

Query:   178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             E+ ++ +EEEE++E+EE+EEEEE+EE+E+EEE++++E
Sbjct:    32 EEEEE*EEEEEEQEEEEEEEEEEEEEEEEEEEEEEEE 142

 Score = 122 (42.9 bits), Expect = 4.1e-06, P = 4.1e-06
 Identities = 20/37 (54%), Positives = 35/37 (94%), Frame = +2

Query:   178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             E+  +++EEE++EE+EE+EEEEE+EE+E+EEE++++E
Sbjct:    38 EEE*EEEEEEQEEEEEEEEEEEEEEEEEEEEEEEEEE 148

 Score = 122 (42.9 bits), Expect = 4.1e-06, P = 4.1e-06
 Identities = 20/37 (54%), Positives = 35/37 (94%), Frame = +2

Query:   178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             E  ++++E+EE+EE+EE+EEEEE+EE+E+EEE++++E
Sbjct:    44 E*EEEEEEQEEEEEEEEEEEEEEEEEEEEEEEEEEEE 154

 Score = 121 (42.6 bits), Expect = 5.4e-06, P = 5.4e-06
 Identities = 20/37 (54%), Positives = 35/37 (94%), Frame = +2

Query:   178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             E+ ++++EEEE+EE EE+EEE+E+EE+E+EEE++++E
Sbjct:     5 EEEEEEEEEEEEEE*EEEEEEQEEEEEEEEEEEEEEE 115

 Score = 121 (42.6 bits), Expect = 5.4e-06, P = 5.4e-06
 Identities = 20/37 (54%), Positives = 35/37 (94%), Frame = +2

Query:   178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             E+ ++++EEEE EE+EE++EEEE+EE+E+EEE++++E
Sbjct:    14 EEEEEEEEEEE*EEEEEEQEEEEEEEEEEEEEEEEEE 124

 Score = 121 (42.6 bits), Expect = 5.4e-06, P = 5.4e-06
 Identities = 20/37 (54%), Positives = 35/37 (94%), Frame = +2

Query:   178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             E+ ++++EEEE+EE+EE+EEEEE+EE+E+EE ++++E
Sbjct:   101 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE*EEEEE 211

 Score = 121 (42.6 bits), Expect = 5.4e-06, P = 5.4e-06
 Identities = 20/37 (54%), Positives = 35/37 (94%), Frame = +2

Query:   178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             E+ ++++EEEE+EE+EE+EEEEE+EE+E+E E++++E
Sbjct:   104 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEE*EEEEEE 214

 Score = 121 (42.6 bits), Expect = 5.4e-06, P = 5.4e-06
 Identities = 20/37 (54%), Positives = 35/37 (94%), Frame = +2

Query:   178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             E+ ++++EEEE+EE+EE+EEEEE+EE+ +EEE++++E
Sbjct:   113 EEEEEEEEEEEEEEEEEEEEEEEEEEE*EEEEEEEEE 223

 Score = 119 (41.9 bits), Expect = 9.3e-06, P = 9.3e-06
 Identities = 20/37 (54%), Positives = 34/37 (91%), Frame = +2

Query:   178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             E+ ++++EEE +EE+EE EEEEE+EE+E+EEE++++E
Sbjct:    17 EEEEEEEEEE*EEEEEEQEEEEEEEEEEEEEEEEEEE 127

 Score = 119 (41.9 bits), Expect = 9.3e-06, P = 9.3e-06
 Identities = 20/37 (54%), Positives = 34/37 (91%), Frame = +2

Query:   178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             E+ ++++ EEE+EE EE+EEEEE+EE+E+EEE++++E
Sbjct:    26 EEEEEEE*EEEEEEQEEEEEEEEEEEEEEEEEEEEEE 136

 Score = 118 (41.5 bits), Expect = 1.2e-05, P = 1.2e-05
 Identities = 19/37 (51%), Positives = 35/37 (94%), Frame = +2

Query:   178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             E+ ++++EEEE+EE+ E+EEEE++EE+E+EEE++++E
Sbjct:     2 EEEEEEEEEEEEEEE*EEEEEEQEEEEEEEEEEEEEE 112

 Score = 118 (41.5 bits), Expect = 1.2e-05, P = 1.2e-05
 Identities = 19/37 (51%), Positives = 35/37 (94%), Frame = +2

Query:   178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             E+ ++++EEEE+E +EE+EE+EE+EE+E+EEE++++E
Sbjct:     8 EEEEEEEEEEEEE*EEEEEEQEEEEEEEEEEEEEEEE 118

 Score = 118 (41.5 bits), Expect = 1.2e-05, P = 1.2e-05
 Identities = 19/37 (51%), Positives = 35/37 (94%), Frame = +2

Query:   178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             E+ ++++EEEE+ E+EE+E+EEE+EE+E+EEE++++E
Sbjct:    11 EEEEEEEEEEEE*EEEEEEQEEEEEEEEEEEEEEEEE 121

 Score = 118 (41.5 bits), Expect = 1.2e-05, P = 1.2e-05
 Identities = 19/37 (51%), Positives = 35/37 (94%), Frame = +2

Query:   178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             E+ ++++EE E+EE+E++EEEEE+EE+E+EEE++++E
Sbjct:    20 EEEEEEEEE*EEEEEEQEEEEEEEEEEEEEEEEEEEE 130

 Score = 118 (41.5 bits), Expect = 1.2e-05, P = 1.2e-05
 Identities = 21/37 (56%), Positives = 34/37 (91%), Frame = +2

Query:   178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             E+ ++++EEEE+EE+EE+EEEEE EE+E+EEE+++ E
Sbjct:   125 EEEEEEEEEEEEEEEEEEEEEEE*EEEEEEEEEEE*E 235

 Score = 115 (40.5 bits), Expect = 2.8e-05, P = 2.8e-05
 Identities = 23/77 (29%), Positives = 53/77 (68%), Frame = +2

Query:   138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197
             ++++  E++  + +E+ E++      + + +  ++   + E+ ++++EEEE+EE EE+EE
Sbjct:    32 EEEEE*EEEEEEQEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE*EEEEE 211

Query:   198 EEEDEEDEDEEEDDDDE 214
             EEE+EE E+E E++++E
Sbjct:   212 EEEEEE*EEE*EEEEEE 262

 Score = 112 (39.4 bits), Expect = 6.1e-05, P = 6.1e-05
 Identities = 24/79 (30%), Positives = 54/79 (68%), Frame = +2

Query:   138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEED-- 195
             ++++  E++  + +E+ E++      + + +  ++   + E+ ++++EEEE+EE+EE+  
Sbjct:    20 EEEEEEEEE*EEEEEEQEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE*E 199

Query:   196 EEEEEDEEDEDEEEDDDDE 214
             EEEEE+EE+E EEE +++E
Sbjct:   200 EEEEEEEEEE*EEE*EEEE 256

 Score = 111 (39.1 bits), Expect = 7.9e-05, P = 7.9e-05
 Identities = 21/76 (27%), Positives = 53/76 (69%), Frame = +2

Query:   138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197
             ++++  E++  + +E+ E++      + + +  ++   + E+ ++++ EEE EE+EE+EE
Sbjct:    89 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE*EEEEEEEEEEE*EEE*EEEEEEEE 268

Query:   198 EEEDEEDEDEEEDDDD 213
             EEE+EE+E+E+E++++
Sbjct:   269 EEEEEEEEEEKEEEEE 316

 Score = 109 (38.4 bits), Expect = 0.00014, P = 0.00014
 Identities = 22/74 (29%), Positives = 51/74 (68%), Frame = +2

Query:   138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197
             ++++  E++  + +E+ E++      + + +  ++   + E+  +++EEEE+EE+EE+EE
Sbjct:   113 EEEEEEEEEEEEEEEEEEEEEEEEEEE*EEEEEEEEEEE*EEE*EEEEEEEEEEEEEEEE 292

Query:   198 EEEDEEDEDEEEDD 211
             EE++EE+E EEE++
Sbjct:   293 EEKEEEEEVEEEEE 334


>L16900 Yeast intrastrand crosslink recognition protein (Ixr1) gene,
        Length = 3036

  Plus Strand HSPs:

 Score = 145 (51.0 bits), Expect = 4.8e-07, P = 4.8e-07
 Identities = 46/151 (30%), Positives = 67/151 (44%), Frame = +3

Query:     2 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 61
             K  PK+P    S+Y  F  + R E  ++ P+A V   E SK  S RWK ++  +K  F +
Sbjct:  2037 KQGPKRPS---SAYFLFSMSIRNELLQQFPEAKV--PELSKLASARWKELTDDQKKPFYE 2201

Query:    62 MAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSI 121
               + +  +Y      Y       +K    P  PKRP   F  F  E RP +  E+P   +
Sbjct:  2202 EFRTNWEKYRVVRDAY-------EKTL--P--PKRPSGPFIQFTQEIRPTVVKENPDKGL 2348

Query:   122 GDVAKKLGEMWNNTAADDKQPY-EKKAAKLKE 152
              ++ K +GE W       K  Y E    +LKE
Sbjct:  2349 IEITKIIGERWRELDPAKKAEYTETYKKRLKE 2444

 Score = 106 (37.3 bits), Expect = 0.028, P = 0.028
 Identities = 27/89 (30%), Positives = 43/89 (48%), Frame = +3

Query:    83 ETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQP 142
             E +K+ K    PKRP SA+FLF    R ++  + P   + +++K     W     D K+P
Sbjct:  2016 ERRKQLKK-QGPKRPSSAYFLFSMSIRNELLQQFPEAKVPELSKLASARWKELTDDQKKP 2192

Query:   143 -YEK------KAAKLKEKYEKDIAAYRAKG 165
              YE+      K   +++ YEK +   R  G
Sbjct:  2193 FYEEFRTNWEKYRVVRDAYEKTLPPKRPSG 2282


>I66612 Sequence 12 from patent US 5670621.
        Length = 3292

  Plus Strand HSPs:

 Score = 145 (51.0 bits), Expect = 4.9e-07, P = 4.9e-07
 Identities = 46/151 (30%), Positives = 67/151 (44%), Frame = +1

Query:     2 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 61
             K  PK+P    S+Y  F  + R E  ++ P+A V   E SK  S RWK ++  +K  F +
Sbjct:   907 KQGPKRPS---SAYFLFSMSIRNELLQQFPEAKV--PELSKLASARWKELTDDQKKPFYE 1071

Query:    62 MAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSI 121
               + +  +Y      Y       +K    P  PKRP   F  F  E RP +  E+P   +
Sbjct:  1072 EFRTNWEKYRVVRDAY-------EKTL--P--PKRPSGPFIQFTQEIRPTVVKENPDKGL 1218

Query:   122 GDVAKKLGEMWNNTAADDKQPY-EKKAAKLKE 152
              ++ K +GE W       K  Y E    +LKE
Sbjct:  1219 IEITKIIGERWRELDPCQKAEYTETYKKRLKE 1314

 Score = 106 (37.3 bits), Expect = 0.029, P = 0.028
 Identities = 27/89 (30%), Positives = 43/89 (48%), Frame = +1

Query:    83 ETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQP 142
             E +K+ K    PKRP SA+FLF    R ++  + P   + +++K     W     D K+P
Sbjct:   886 ERRKQLKK-QGPKRPSSAYFLFSMSIRNELLQQFPEAKVPELSKLASARWKELTDDQKKP 1062

Query:   143 -YEK------KAAKLKEKYEKDIAAYRAKG 165
              YE+      K   +++ YEK +   R  G
Sbjct:  1063 FYEEFRTNWEKYRVVRDAYEKTLPPKRPSG 1152


>E10126 DNA encoding an immunogenicity protein of Leucocytozon caulleryi
        Length = 3399

  Plus Strand HSPs:

 Score = 145 (51.0 bits), Expect = 4.9e-07, P = 4.9e-07
 Identities = 30/77 (38%), Positives = 52/77 (67%), Frame = +1

Query:   138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197
             ++++  E+K     E+ EK       K   +  +K + + E+ ++ +EEEE+EE+EE+EE
Sbjct:  2590 EEEEEEEEKVTH--EEEEKVTHEEEEKVTHEEEEKVIHEEEEKEEDEEEEEEEEEEEEEE 2763

Query:   198 EEEDEEDEDEEEDDDDE 214
             EEEDEE+E+EEE+D++E
Sbjct:  2764 EEEDEEEEEEEEEDEEE 2814

 Score = 143 (50.3 bits), Expect = 9.4e-07, P = 9.4e-07
 Identities = 28/77 (36%), Positives = 53/77 (68%), Frame = +1

Query:   138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197
             ++K  +E++     E+ EK I     K + +  ++   + E+ +++++EEE+EE+EEDEE
Sbjct:  2632 EEKVTHEEEEKVTHEEEEKVIHEEEEKEEDEEEEEEEEEEEEEEEEEDEEEEEEEEEDEE 2811

Query:   198 EEEDEEDEDEEEDDDDE 214
             EEE+EE+E+EEE+++ E
Sbjct:  2812 EEEEEENEEEEEEENKE 2862

 Score = 140 (49.3 bits), Expect = 2.4e-06, P = 2.4e-06
 Identities = 30/72 (41%), Positives = 47/72 (65%), Frame = +1

Query:   144 EKKAAKLKEKYEKDIAAYRAKGK-PDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDE 202
             E+K    +E+ E++   +  + K     ++ V   E+ K   EEEE EEDEE+EEEEE+E
Sbjct:  2572 EEKVTYEEEEEEEEKVTHEEEEKVTHEEEEKVTHEEEEKVIHEEEEKEEDEEEEEEEEEE 2751

Query:   203 EDEDEEEDDDDE 214
             E+E+EEED+++E
Sbjct:  2752 EEEEEEEDEEEE 2787

 Score = 119 (41.9 bits), Expect = 0.00089, P = 0.00089
 Identities = 25/77 (32%), Positives = 46/77 (59%), Frame = +1

Query:   138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197
             ++K  +E++     E+ E++      + +     +   K    +++K   E+EE EEDEE
Sbjct:  2548 EEKVTHEEEEKVTYEEEEEEEEKVTHEEEEKVTHEEEEKVTHEEEEKVIHEEEEKEEDEE 2727

Query:   198 EEEDEEDEDEEEDDDDE 214
             EEE+EE+E+EEE+++DE
Sbjct:  2728 EEEEEEEEEEEEEEEDE 2778

 Score = 116 (40.8 bits), Expect = 0.0020, P = 0.0020
 Identities = 28/89 (31%), Positives = 54/89 (60%), Frame = +1

Query:   138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197
             ++K  +E++     E+ EK I     K + +  ++   + E+ +++++EEE+EE+EEDEE
Sbjct:  2632 EEKVTHEEEEKVTHEEEEKVIHEEEEKEEDEEEEEEEEEEEEEEEEEDEEEEEEEEEDEE 2811

Query:   198 EEEDEEDEDEEEDD------------DDE 214
             EEE+EE+E+EEE++            ++E
Sbjct:  2812 EEEEEENEEEEEEENKEEEEEEKEEHEEE 2898

 Score = 115 (40.5 bits), Expect = 0.0026, P = 0.0026
 Identities = 23/81 (28%), Positives = 54/81 (66%), Frame = +1

Query:   138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197
             ++K  +E++   + E+ EK+      + + +  ++   + E+ ++++EE+E+EE+EE+ E
Sbjct:  2656 EEKVTHEEEEKVIHEEEEKEEDEEEEEEEEEEEEEEEEEDEEEEEEEEEDEEEEEEEENE 2835

Query:   198 EEEDEEDEDEEEDD----DDE 214
             EEE+EE+++EEE++    ++E
Sbjct:  2836 EEEEEENKEEEEEEKEEHEEE 2898

 Score = 103 (36.3 bits), Expect = 0.064, P = 0.062
 Identities = 21/74 (28%), Positives = 50/74 (67%), Frame = +1

Query:   144 EKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEE 203
             E++  + +E+ E++      + + D  ++   + ++ ++++EE E+EE+EE++EEEE+E+
Sbjct:  2701 EEEKEEDEEEEEEEEEEEEEEEEEDEEEEEEEEEDEEEEEEEENEEEEEEENKEEEEEEK 2880

Query:   204 DEDEEE---DDDDE 214
             +E EEE   ++++E
Sbjct:  2881 EEHEEEVTHEEEEE 2922

 Score = 97 (34.1 bits), Expect = 0.31, P = 0.27
 Identities = 20/75 (26%), Positives = 50/75 (66%), Frame = +1

Query:   144 EKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEE 203
             E++  + +E+ E++      + + D  ++   + ++ ++++EE E+EE+EE++EEEE+E+
Sbjct:  2701 EEEKEEDEEEEEEEEEEEEEEEEEDEEEEEEEEEDEEEEEEEENEEEEEEENKEEEEEEK 2880

Query:   204 DEDEEE----DDDDE 214
             +E EEE    +++++
Sbjct:  2881 EEHEEEVTHEEEEEK 2925

 Score = 93 (32.7 bits), Expect = 0.87, P = 0.58
 Identities = 22/77 (28%), Positives = 45/77 (58%), Frame = +1

Query:   138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197
             +D++  E++  + +E+ E+D      + + +  ++     E+ +++ +EEE+EE EE EE
Sbjct:  2716 EDEEEEEEEEEEEEEEEEEDEEEEEEEEEDEEEEEEEENEEEEEEENKEEEEEEKEEHEE 2895

Query:   198 E---EEDEEDEDEEEDD 211
             E   EE+EE    EE++
Sbjct:  2896 EVTHEEEEEKVTHEEEE 2946

 Score = 90 (31.7 bits), Expect = 1.9, P = 0.86
 Identities = 20/72 (27%), Positives = 41/72 (56%), Frame = +1

Query:   138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197
             ++K  +E++  ++  + EK+   +  + K    ++  V  E+ +K   EEE+EE+E+   
Sbjct:  2446 EEKVTHEEEKEEVTHEEEKEEVTHEEEEKVTHEEEEKVTHEEEEKVTYEEEEEEEEKVTH 2625

Query:   198 EEEDEEDEDEEE 209
             EEE++   +EEE
Sbjct:  2626 EEEEKVTHEEEE 2661


>Z28032;Y13137 S.cerevisiae chromosome XI reading frame ORF YKL032c
            Length = 3499

  Minus Strand HSPs:

 Score = 145 (51.0 bits), Expect = 4.9e-07, P = 4.9e-07
 Identities = 46/151 (30%), Positives = 67/151 (44%), Frame = -1

Query:     2 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 61
             K  PK+P    S+Y  F  + R E  ++ P+A V   E SK  S RWK ++  +K  F +
Sbjct:  2215 KQGPKRPS---SAYFLFSMSIRNELLQQFPEAKV--PELSKLASARWKELTDDQKKPFYE 2051

Query:    62 MAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSI 121
               + +  +Y      Y       +K    P  PKRP   F  F  E RP +  E+P   +
Sbjct:  2050 EFRTNWEKYRVVRDAY-------EKTL--P--PKRPSGPFIQFTQEIRPTVVKENPDKGL 1904

Query:   122 GDVAKKLGEMWNNTAADDKQPY-EKKAAKLKE 152
              ++ K +GE W       K  Y E    +LKE
Sbjct:  1903 IEITKIIGERWRELDPAKKAEYTETYKKRLKE 1808

 Score = 106 (37.3 bits), Expect = 0.029, P = 0.029
 Identities = 27/89 (30%), Positives = 43/89 (48%), Frame = -1

Query:    83 ETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQP 142
             E +K+ K    PKRP SA+FLF    R ++  + P   + +++K     W     D K+P
Sbjct:  2236 ERRKQLKK-QGPKRPSSAYFLFSMSIRNELLQQFPEAKVPELSKLASARWKELTDDQKKP 2060

Query:   143 -YEK------KAAKLKEKYEKDIAAYRAKG 165
              YE+      K   +++ YEK +   R  G
Sbjct:  2059 FYEEFRTNWEKYRVVRDAYEKTLPPKRPSG 1970


>U53154 Caenorhabditis elegans cosmid C33G8.
        Length = 39,103

  Plus Strand HSPs:

 Score = 144 (50.7 bits), Expect = 5.3e-07, Sum P(2) = 5.3e-07
 Identities = 47/197 (23%), Positives = 89/197 (45%), Frame = +3

Query:    18 FVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARYEREMKTY 77
             F +  +++ KKK  D      +  KK  E+      ++K K +   K D    E+E    
Sbjct: 31398 FQKDKKKKDKKKEEDDEEEEQKDKKKKDEKNDDDDEEDKKKDKKKKKDDNDEEEKEKDKK 31577

Query:    78 IPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAA 137
                K +     +D N  K+          +   K   E+      D  KK  +   +   
Sbjct: 31578 KKDKKKDDDDDEDENDKKKDKK------KKKDDKDDDENEDDKKKDKKKKKDDKEKDDDD 31739

Query:   138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197
             ++++  +KK  K  +  E+D    + K K D   +     +K KKKK++++D+EDEE E+
Sbjct: 31740 EEEKDKKKKDKKKNDDDEEDKKKDKKKKKDDDDDEDEDNKKKDKKKKKDDKDDEDEEKEK 31919

Query:   198 EEEDEEDEDEEEDDDDE 214
             +++ ++ + +++DDDDE
Sbjct: 31920 DKKKKDKKKDDDDDDDE 31970

 Score = 137 (48.2 bits), Expect = 6.8e-06, P = 6.8e-06
 Identities = 28/89 (31%), Positives = 55/89 (61%), Frame = +3

Query:   126 KKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKE 185
             KK  +  N+   +DK+  +KK     +  ++D      K K D       + EK KKKK+
Sbjct: 31758 KKKDKKKNDDDEEDKKKDKKKKKDDDDDEDEDNKKKDKKKKKDDKDDEDEEKEKDKKKKD 31937

Query:   186 EEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             +++D++D++DE+E++D++ +D+++DD+DE
Sbjct: 31938 KKKDDDDDDDEKEKKDKKKKDDKDDDEDE 32024

 Score = 134 (47.2 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
 Identities = 51/191 (26%), Positives = 92/191 (48%), Frame = +3

Query:    24 EEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARYEREMKT-YIPPKG 82
             EE KKK      + ++  +K  E+ K    K+K   +D  + DK + +++ K      + 
Sbjct: 31503 EEDKKKDKKKKKDDNDEEEK--EKDKKKKDKKKDDDDDEDENDKKKDKKKKKDDKDDDEN 31676

Query:    83 ETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQP 142
             E  KK KD    K+          E + K K +       +  KK  +       DD+  
Sbjct: 31677 EDDKK-KDKKK-KKDDKEKDDDDEEEKDKKKKDKKKNDDDEEDKKKDKKKKKDDDDDEDE 31850

Query:   143 YEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDE 202
               KK  K K+K +KD        + +  +K   K +K KKK ++++D+E E+ +++++D+
Sbjct: 31851 DNKKKDKKKKKDDKD-------DEDEEKEKD--KKKKDKKKDDDDDDDEKEKKDKKKKDD 32003

Query:   203 EDEDEEEDDDDE 214
             +D+DE+ED DD+
Sbjct: 32004 KDDDEDEDKDDK 32039

 Score = 117 (41.2 bits), Expect = 0.0026, Sum P(2) = 0.0025
 Identities = 53/193 (27%), Positives = 91/193 (47%), Frame = +3

Query:    24 EEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARYEREMKT-YIPPKG 82
             EE KKK      + ++  +K  E+ K    K+K   +D  + DK + +++ K      + 
Sbjct: 31503 EEDKKKDKKKKKDDNDEEEK--EKDKKKKDKKKDDDDDEDENDKKKDKKKKKDDKDDDEN 31676

Query:    83 ETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQP 142
             E  KK KD    K+          E + K K +       +  KK  +       DD+  
Sbjct: 31677 EDDKK-KDKKK-KKDDKEKDDDDEEEKDKKKKDKKKNDDDEEDKKKDKKKKKDDDDDEDE 31850

Query:   143 YEKKAAKLKEKYEKDIA-AYRAKGKPDAAKK------GVVKAEKSKKKKEEEEDEEDEE- 194
               KK  K K+K +KD     + K K    KK         K +K KKKK++++D+EDE+ 
Sbjct: 31851 DNKKKDKKKKKDDKDDEDEEKEKDKKKKDKKKDDDDDDDEKEKKDKKKKDDKDDDEDEDK 32030

Query:   195 -DEEEEEDEEDEDEEED 210
              D+++++D+ D+D ++D
Sbjct: 32031 DDKKKKKDDVDDDMKKD 32081

 Score = 104 (36.6 bits), Expect = 0.089, Sum P(2) = 0.085
 Identities = 52/189 (27%), Positives = 90/189 (47%), Frame = +3

Query:    23 REEHKKKHPDASVNFSEFSKKCSERWKTMSAKE----KGKFEDMAKADKARYEREMKTYI 78
             +++ KKK  D      E  KK  ++ K     E    K K +   K DK   E E     
Sbjct: 31515 KKDKKKKKDDNDEEEKEKDKKKKDKKKDDDDDEDENDKKKDKKKKKDDKDDDENE----- 31679

Query:    79 PPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAAD 138
               K + KKK KD    ++          + + K K +          KK  +  ++   D
Sbjct: 31680 DDKKKDKKKKKDDK--EKDDDDEEEKDKKKKDKKKNDDDEEDKKKDKKKKKDDDDDEDED 31853

Query:   139 DKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGV----VKAEKSKKKKEEEEDEEDEE 194
             +K+  +KK  K  +K ++D    + K K D  K        K +K KKKK++++D+EDE+
Sbjct: 31854 NKKKDKKK--KKDDKDDEDEEKEKDKKKKDKKKDDDDDDDEKEKKDKKKKDDKDDDEDED 32027

Query:   195 --DEEEEEDEEDEDEEED 210
               D+++++D+ D+D ++D
Sbjct: 32028 KDDKKKKKDDVDDDMKKD 32081

 Score = 100 (35.2 bits), Expect = 1.6, Sum P(2) = 0.79
 Identities = 24/73 (32%), Positives = 43/73 (58%), Frame = +3

Query:   140 KQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEE--DEE 197
             K   +KK  K  E  EK+    +   K D       K +K KKKK++++D+EDE+  D++
Sbjct: 31863 KDKKKKKDDKDDEDEEKEKDKKKKDKKKDDDDDDDEKEKKDKKKKDDKDDDEDEDKDDKK 32042

Query:   198 EEEDEEDEDEEED 210
             +++D+ D+D ++D
Sbjct: 32043 KKKDDVDDDMKKD 32081

 Score = 89 (31.3 bits), Expect = 2.8, P = 0.94
 Identities = 13/37 (35%), Positives = 31/37 (83%), Frame = +1

Query:   176 KAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDD 212
             K +K   KK+E+E+EE+++D+++++ ++++D EE++D
Sbjct: 28093 KNKKKGNKKDEDEEEEEDKDKKKKDKKKNKDSEEEED 28203

 Score = 88 (31.0 bits), Expect = 3.6, P = 0.97
 Identities = 24/67 (35%), Positives = 39/67 (58%), Frame = +1

Query:   144 EKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEE 203
             EKK  K   K ++D      + + D  KK   K +K KK K+ EE+E+ ++D++++ D  
Sbjct: 28087 EKKNKKKGNKKDED-----EEEEEDKDKK---KKDK-KKNKDSEEEEDKKKDKKKKNDSS 28239

Query:   204 DEDEEED 210
             DE EEE+
Sbjct: 28240 DESEEEN 28260

 Score = 87 (30.6 bits), Expect = 4.7, P = 0.99
 Identities = 13/37 (35%), Positives = 29/37 (78%), Frame = +1

Query:   178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             EK  KKK  ++DE++EE+E++++ ++D+ + +D ++E
Sbjct: 28087 EKKNKKKGNKKDEDEEEEEDKDKKKKDKKKNKDSEEE 28197

 Score = 49 (17.2 bits), Expect = 5.3e-07, Sum P(2) = 5.3e-07
 Identities = 7/15 (46%), Positives = 14/15 (93%), Frame = +1

Query:   197 EEEEDEEDEDEEEDD 211
             +E++D+EDED+++ D
Sbjct: 32251 QEDDDKEDEDDKKKD 32295

 Score = 43 (15.1 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
 Identities = 6/11 (54%), Positives = 11/11 (100%), Frame = +1

Query:   202 EEDEDEEEDDD 212
             +ED+D+E++DD
Sbjct: 32251 QEDDDKEDEDD 32283

 Score = 43 (15.1 bits), Expect = 2.5, Sum P(3) = 0.92
 Identities = 16/61 (26%), Positives = 26/61 (42%), Frame = +2

Query:    15 YAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARYEREM 74
             Y FF+Q     H +            +K  S+   + S+++K K + M   DK + E E 
Sbjct: 30554 YGFFLQGRHGHHGRHGMGRHGGHGRRNKSGSDSDSSDSSEDKKKRKQMR--DKKKQEEED 30727

Query:    75 K 75
             K
Sbjct: 30728 K 30730

 Score = 41 (14.4 bits), Expect = 3.5e-06, Sum P(2) = 3.5e-06
 Identities = 5/12 (41%), Positives = 12/12 (100%), Frame = +1

Query:   203 EDEDEEEDDDDE 214
             +++D++ED+DD+
Sbjct: 32251 QEDDDKEDEDDK 32286


>X71622 S.cerevisiae DNA sequence for Kazal serine protease inhibitor signature
        Length = 11,719

  Minus Strand HSPs:

 Score = 145 (51.0 bits), Expect = 5.6e-07, P = 5.6e-07
 Identities = 46/151 (30%), Positives = 67/151 (44%), Frame = -1

Query:     2 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 61
             K  PK+P    S+Y  F  + R E  ++ P+A V   E SK  S RWK ++  +K  F +
Sbjct:  9469 KQGPKRPS---SAYFLFSMSIRNELLQQFPEAKV--PELSKLASARWKELTDDQKKPFYE 9305

Query:    62 MAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSI 121
               + +  +Y      Y       +K    P  PKRP   F  F  E RP +  E+P   +
Sbjct:  9304 EFRTNWEKYRVVRDAY-------EKTL--P--PKRPSGPFIQFTQEIRPTVVKENPDKGL 9158

Query:   122 GDVAKKLGEMWNNTAADDKQPY-EKKAAKLKE 152
              ++ K +GE W       K  Y E    +LKE
Sbjct:  9157 IEITKIIGERWRELDPAKKAEYTETYKKRLKE 9062

 Score = 106 (37.3 bits), Expect = 0.032, P = 0.031
 Identities = 27/89 (30%), Positives = 43/89 (48%), Frame = -1

Query:    83 ETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQP 142
             E +K+ K    PKRP SA+FLF    R ++  + P   + +++K     W     D K+P
Sbjct:  9490 ERRKQLKK-QGPKRPSSAYFLFSMSIRNELLQQFPEAKVPELSKLASARWKELTDDQKKP 9314

Query:   143 -YEK------KAAKLKEKYEKDIAAYRAKG 165
              YE+      K   +++ YEK +   R  G
Sbjct:  9313 FYEEFRTNWEKYRVVRDAYEKTLPPKRPSG 9224


>M15825 Chinese hamster nucleolin (C23) mRNA.
        Length = 2229

  Plus Strand HSPs:

 Score = 144 (50.7 bits), Expect = 5.9e-07, P = 5.9e-07
 Identities = 38/103 (36%), Positives = 60/103 (58%), Frame = +1

Query:   110 PKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYR-AKGKPD 168
             P +KG+      G VA       +    +D++  E+   +  +  E++      AKGK  
Sbjct:   409 PVVKGKQ-----GKVAAAAPASEDEDEEEDEEEEEEDEEEEDDSEEEEAMEITPAKGKKA 573

Query:   169 AAKKGVVKAEKSKKKKE--EEEDEEDEEDEEEEEDEEDEDEEEDDD 212
              AK   VKA+   ++ +  EEEDE++EEDEEEEEDEE+E+EEE+++
Sbjct:   574 PAKVVPVKAKNVAEEDDDDEEEDEDEEEDEEEEEDEEEEEEEEEEE 711

 Score = 116 (40.8 bits), Expect = 0.0018, P = 0.0018
 Identities = 20/46 (43%), Positives = 34/46 (73%), Frame = +1

Query:   171 KKGVVKAEKSKK--KKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             KKG V   K  K  K  ++ED +++ED++++ED+ DEDEE++++DE
Sbjct:   262 KKGAVTPAKGAKNGKNAKKEDSDEDEDDDDDEDDSDEDEEDEEEDE 399

 Score = 113 (39.8 bits), Expect = 0.0041, P = 0.0041
 Identities = 21/46 (45%), Positives = 33/46 (71%), Frame = +1

Query:   171 KKGVVKAEKSKK-----KKEEEEDEEDEEDEEEEEDEEDEDEEEDD 211
             KKG V   K  K     KKE+ +++ED++D+E++ DE++EDEEED+
Sbjct:   262 KKGAVTPAKGAKNGKNAKKEDSDEDEDDDDDEDDSDEDEEDEEEDE 399

 Score = 107 (37.7 bits), Expect = 0.020, P = 0.020
 Identities = 21/40 (52%), Positives = 31/40 (77%), Frame = +1

Query:   171 KKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEED 210
             K+G V A  +    E+E++EEDEE+EEE+E+EED+ EEE+
Sbjct:   424 KQGKVAA--AAPASEDEDEEEDEEEEEEDEEEEDDSEEEE 537


>L22660 Rat polymeric immunoglobulin receptor mRNA.
        Length = 326

  Plus Strand HSPs:

 Score = 129 (45.4 bits), Expect = 6.3e-07, P = 6.3e-07
 Identities = 22/34 (64%), Positives = 33/34 (97%), Frame = +1

Query:   178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDD 211
             E+ ++KKEEEE+EE+EE+EEEEE+EE+E+EEE++
Sbjct:   106 EQGEEKKEEEEEEEEEEEEEEEEEEEEEEEEEEE 207

 Score = 124 (43.7 bits), Expect = 2.4e-06, P = 2.4e-06
 Identities = 20/34 (58%), Positives = 34/34 (100%), Frame = +3

Query:   181 KKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             ++++EEEE+EE+EE+EEEEE+EE+E+EEE++++E
Sbjct:   207 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 308

 Score = 124 (43.7 bits), Expect = 2.4e-06, P = 2.4e-06
 Identities = 20/34 (58%), Positives = 34/34 (100%), Frame = +3

Query:   181 KKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             ++++EEEE+EE+EE+EEEEE+EE+E+EEE++++E
Sbjct:   210 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 311

 Score = 123 (43.3 bits), Expect = 3.3e-06, P = 3.3e-06
 Identities = 20/35 (57%), Positives = 34/35 (97%), Frame = +3

Query:   178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDD 212
             E+ ++++EEEE+EE+EE+EEEEE+EE+E+EEE+++
Sbjct:   207 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 311

 Score = 122 (42.9 bits), Expect = 4.2e-06, P = 4.2e-06
 Identities = 21/45 (46%), Positives = 38/45 (84%), Frame = +1

Query:   170 AKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             +KK   K E+ +++++ EE +E+EE+EEEEE+EE+E+EEE++++E
Sbjct:    64 SKKQEEKEEQEQEEEQGEEKKEEEEEEEEEEEEEEEEEEEEEEEE 198

 Score = 120 (42.2 bits), Expect = 7.4e-06, P = 7.4e-06
 Identities = 21/31 (67%), Positives = 30/31 (96%), Frame = +1

Query:   179 KSKKKKEEEEDEEDEEDEEEEEDEEDEDEEE 209
             + KK++EEEE+EE+EE+EEEEE+EE+E+EEE
Sbjct:   115 EEKKEEEEEEEEEEEEEEEEEEEEEEEEEEE 207

 Score = 120 (42.2 bits), Expect = 7.4e-06, P = 7.4e-06
 Identities = 22/47 (46%), Positives = 40/47 (85%), Frame = +1

Query:   170 AKKGVVKAEKSKKKK--EEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             +KK   K E+ ++++  EE+++EE+EE+EEEEE+EE+E+EEE++++E
Sbjct:    64 SKKQEEKEEQEQEEEQGEEKKEEEEEEEEEEEEEEEEEEEEEEEEEE 204

 Score = 119 (41.9 bits), Expect = 9.6e-06, P = 9.6e-06
 Identities = 22/59 (37%), Positives = 42/59 (71%), Frame = +1

Query:   156 KDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             K I  Y    +P   +  +V  ++ +K+++E+E+E+ EE +EEEE+EE+E+EEE++++E
Sbjct:     4 KVILGYLVSVRPAWNQ*ELVSKKQEEKEEQEQEEEQGEEKKEEEEEEEEEEEEEEEEEE 180

 Score = 118 (41.5 bits), Expect = 1.3e-05, P = 1.3e-05
 Identities = 21/37 (56%), Positives = 33/37 (89%), Frame = +3

Query:   173 GVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEE 209
             G  + E+ ++++EEEE+EE+EE+EEEEE+EE+E+EEE
Sbjct:   201 GGEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 311

 Score = 117 (41.2 bits), Expect = 1.6e-05, P = 1.6e-05
 Identities = 19/41 (46%), Positives = 36/41 (87%), Frame = +1

Query:   174 VVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             V K ++ K+++E+EE++ +E+ EEEEE+EE+E+EEE++++E
Sbjct:    61 VSKKQEEKEEQEQEEEQGEEKKEEEEEEEEEEEEEEEEEEE 183

 Score = 115 (40.5 bits), Expect = 2.8e-05, P = 2.8e-05
 Identities = 20/37 (54%), Positives = 33/37 (89%), Frame = +3

Query:   173 GVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEE 209
             G  + E+ ++++EEEE+EE+EE+EEEEE+EE+E+EE+
Sbjct:   204 GEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEK 314

 Score = 109 (38.4 bits), Expect = 0.00014, P = 0.00014
 Identities = 18/32 (56%), Positives = 31/32 (96%), Frame = +3

Query:   178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEE 209
             E+ ++++EEEE+EE+EE+EEEEE+EE+E+E++
Sbjct:   222 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEKK 317

 Score = 105 (37.0 bits), Expect = 0.00040, P = 0.00040
 Identities = 17/32 (53%), Positives = 31/32 (96%), Frame = +3

Query:   178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEE 209
             E+ ++++EEEE+EE+EE+EEEEE+EE+E++++
Sbjct:   225 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEKKK 320

 Score = 103 (36.3 bits), Expect = 0.00068, P = 0.00068
 Identities = 21/41 (51%), Positives = 33/41 (80%), Frame = +3

Query:   173 GVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEE---- 209
             G  + E+ ++++EEEE+EE+EE+EEEEE+EE+E+EEE    
Sbjct:   201 GGEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEKKKK 323

 Score = 102 (35.9 bits), Expect = 0.00087, P = 0.00087
 Identities = 22/40 (55%), Positives = 31/40 (77%), Frame = +1

Query:   178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEE-------- 209
             E+ ++KKEEEE+EE+EE+EEEEE+EE+E+EEE        
Sbjct:   106 EQGEEKKEEEEEEEEEEEEEEEEEEEEEEEEEEEKKKKKK 225

 Score = 101 (35.6 bits), Expect = 0.0011, P = 0.0011
 Identities = 21/42 (50%), Positives = 33/42 (78%), Frame = +3

Query:   173 GVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEE----- 209
             G  + E+ ++++EEEE+EE+EE+EEEEE+EE+E+EEE     
Sbjct:   201 GGEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEKKKKK 326

 Score = 100 (35.2 bits), Expect = 0.0015, P = 0.0015
 Identities = 22/41 (53%), Positives = 31/41 (75%), Frame = +1

Query:   178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEE--------- 209
             E+ ++KKEEEE+EE+EE+EEEEE+EE+E+EEE         
Sbjct:   106 EQGEEKKEEEEEEEEEEEEEEEEEEEEEEEEEEEKKKKKKK 228

 Score = 98 (34.5 bits), Expect = 0.0025, P = 0.0025
 Identities = 22/42 (52%), Positives = 31/42 (73%), Frame = +1

Query:   178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEE---------- 209
             E+ ++KKEEEE+EE+EE+EEEEE+EE+E+EEE          
Sbjct:   106 EQGEEKKEEEEEEEEEEEEEEEEEEEEEEEEEEEKKKKKKKK 231

 Score = 96 (33.8 bits), Expect = 0.0042, P = 0.0042
 Identities = 22/43 (51%), Positives = 31/43 (72%), Frame = +1

Query:   178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEE----------- 209
             E+ ++KKEEEE+EE+EE+EEEEE+EE+E+EEE           
Sbjct:   106 EQGEEKKEEEEEEEEEEEEEEEEEEEEEEEEEEEKKKKKKKKK 234

 Score = 86 (30.3 bits), Expect = 0.056, P = 0.055
 Identities = 22/48 (45%), Positives = 31/48 (64%), Frame = +1

Query:   178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEE---------------- 209
             E+ ++KKEEEE+EE+EE+EEEEE+EE+E+EEE                
Sbjct:   106 EQGEEKKEEEEEEEEEEEEEEEEEEEEEEEEEEEKKKKKKKKKKKKKK 249

 Score = 81 (28.5 bits), Expect = 0.20, P = 0.18
 Identities = 21/47 (44%), Positives = 30/47 (63%), Frame = +1

Query:   179 KSKKKKEEEEDEEDEEDEEEEEDEEDEDEEE---------------- 209
             + KK++EEEE+EE+EE+EEEEE+EE+E+EEE                
Sbjct:   115 EEKKEEEEEEEEEEEEEEEEEEEEEEEEEEEKKKKKKKKKKKKKKKK 255


>AF040950 Mus musculus killer cell inhibitory-like protein p91A gene, exon
          Length = 994

  Minus Strand HSPs:

 Score = 142 (50.0 bits), Expect = 6.3e-07, P = 6.3e-07
 Identities = 24/37 (64%), Positives = 36/37 (97%), Frame = -3

Query:   178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             + +KKKKEEEE+EE+EE+EEEEE+EE+E+EEE++++E
Sbjct:   464 QTNKKKKEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 354

 Score = 134 (47.2 bits), Expect = 7.3e-06, P = 7.3e-06
 Identities = 22/37 (59%), Positives = 36/37 (97%), Frame = -3

Query:   178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             +++ KKK+EEE+EE+EE+EEEEE+EE+E+EEE++++E
Sbjct:   467 KQTNKKKKEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 357

 Score = 133 (46.8 bits), Expect = 9.7e-06, P = 9.7e-06
 Identities = 22/38 (57%), Positives = 35/38 (92%), Frame = -3

Query:   176 KAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDD 213
             +  K KK++EEEE+EE+EE+EEEEE+EE+E+EEE++++
Sbjct:   464 QTNKKKKEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 351

 Score = 123 (43.3 bits), Expect = 0.00017, P = 0.00017
 Identities = 21/35 (60%), Positives = 33/35 (94%), Frame = -3

Query:   176 KAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEED 210
             K +K ++++EEEE+EE+EE+EEEEE+EE+E+EEE+
Sbjct:   455 KKKKEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 351


>U00762 Rattus norvegicus clone1 polymeric immunoglobulin receptor mRNA 3'
        Length = 319

  Plus Strand HSPs:

 Score = 129 (45.4 bits), Expect = 6.4e-07, P = 6.4e-07
 Identities = 22/34 (64%), Positives = 33/34 (97%), Frame = +1

Query:   178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDD 211
             E+ ++KKEEEE+EE+EE+EEEEE+EE+E+EEE++
Sbjct:   112 EQGEEKKEEEEEEEEEEEEEEEEEEEEEEEEEEE 213

 Score = 122 (42.9 bits), Expect = 4.3e-06, P = 4.3e-06
 Identities = 21/45 (46%), Positives = 38/45 (84%), Frame = +1

Query:   170 AKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             +KK   K E+ +++++ EE +E+EE+EEEEE+EE+E+EEE++++E
Sbjct:    70 SKKQEEKEEQEQEEEQGEEKKEEEEEEEEEEEEEEEEEEEEEEEE 204

 Score = 120 (42.2 bits), Expect = 7.5e-06, P = 7.5e-06
 Identities = 21/31 (67%), Positives = 30/31 (96%), Frame = +1

Query:   179 KSKKKKEEEEDEEDEEDEEEEEDEEDEDEEE 209
             + KK++EEEE+EE+EE+EEEEE+EE+E+EEE
Sbjct:   121 EEKKEEEEEEEEEEEEEEEEEEEEEEEEEEE 213

 Score = 120 (42.2 bits), Expect = 7.5e-06, P = 7.5e-06
 Identities = 22/47 (46%), Positives = 40/47 (85%), Frame = +1

Query:   170 AKKGVVKAEKSKKKK--EEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             +KK   K E+ ++++  EE+++EE+EE+EEEEE+EE+E+EEE++++E
Sbjct:    70 SKKQEEKEEQEQEEEQGEEKKEEEEEEEEEEEEEEEEEEEEEEEEEE 210

 Score = 120 (42.2 bits), Expect = 7.5e-06, P = 7.5e-06
 Identities = 23/63 (36%), Positives = 45/63 (71%), Frame = +1

Query:   152 EKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDD 211
             +K+ K I  Y    +P   +  +V  ++ +K+++E+E+E+ EE +EEEE+EE+E+EEE++
Sbjct:     1 QKF-KVILGYLVSVRPAWNQ*ELVSKKQEEKEEQEQEEEQGEEKKEEEEEEEEEEEEEEE 177

Query:   212 DDE 214
             ++E
Sbjct:   178 EEE 186

 Score = 117 (41.2 bits), Expect = 1.7e-05, P = 1.7e-05
 Identities = 19/41 (46%), Positives = 36/41 (87%), Frame = +1

Query:   174 VVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             V K ++ K+++E+EE++ +E+ EEEEE+EE+E+EEE++++E
Sbjct:    67 VSKKQEEKEEQEQEEEQGEEKKEEEEEEEEEEEEEEEEEEE 189

 Score = 105 (37.0 bits), Expect = 0.00041, P = 0.00041
 Identities = 18/26 (69%), Positives = 26/26 (100%), Frame = +3

Query:   184 KEEEEDEEDEEDEEEEEDEEDEDEEE 209
             +EEEE+EE+EE+EEEEE+EE+E+EE+
Sbjct:   210 REEEEEEEEEEEEEEEEEEEEEEEEK 287

 Score = 102 (35.9 bits), Expect = 0.00089, P = 0.00089
 Identities = 22/40 (55%), Positives = 31/40 (77%), Frame = +1

Query:   178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEE-------- 209
             E+ ++KKEEEE+EE+EE+EEEEE+EE+E+EEE        
Sbjct:   112 EQGEEKKEEEEEEEEEEEEEEEEEEEEEEEEEEEKKKKKK 231

 Score = 100 (35.2 bits), Expect = 0.0015, P = 0.0015
 Identities = 22/41 (53%), Positives = 31/41 (75%), Frame = +1

Query:   178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEE--------- 209
             E+ ++KKEEEE+EE+EE+EEEEE+EE+E+EEE         
Sbjct:   112 EQGEEKKEEEEEEEEEEEEEEEEEEEEEEEEEEEKKKKKKK 234

 Score = 99 (34.8 bits), Expect = 0.0020, P = 0.0020
 Identities = 17/24 (70%), Positives = 24/24 (100%), Frame = +3

Query:   187 EEDEEDEEDEEEEEDEEDEDEEED 210
             EE+EE+EE+EEEEE+EE+E+EEE+
Sbjct:   213 EEEEEEEEEEEEEEEEEEEEEEEE 284

 Score = 99 (34.8 bits), Expect = 0.0020, P = 0.0020
 Identities = 16/28 (57%), Positives = 28/28 (100%), Frame = +3

Query:   182 KKKEEEEDEEDEEDEEEEEDEEDEDEEE 209
             +++EEEE+EE+EE+EEEEE+EE+E++++
Sbjct:   210 REEEEEEEEEEEEEEEEEEEEEEEEKKK 293

 Score = 98 (34.5 bits), Expect = 0.0026, P = 0.0025
 Identities = 22/42 (52%), Positives = 31/42 (73%), Frame = +1

Query:   178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEE---------- 209
             E+ ++KKEEEE+EE+EE+EEEEE+EE+E+EEE          
Sbjct:   112 EQGEEKKEEEEEEEEEEEEEEEEEEEEEEEEEEEKKKKKKKK 237

 Score = 96 (33.8 bits), Expect = 0.0043, P = 0.0043
 Identities = 22/43 (51%), Positives = 31/43 (72%), Frame = +1

Query:   178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEE----------- 209
             E+ ++KKEEEE+EE+EE+EEEEE+EE+E+EEE           
Sbjct:   112 EQGEEKKEEEEEEEEEEEEEEEEEEEEEEEEEEEKKKKKKKKK 240

 Score = 96 (33.8 bits), Expect = 0.0043, P = 0.0043
 Identities = 16/24 (66%), Positives = 24/24 (100%), Frame = +3

Query:   188 EDEEDEEDEEEEEDEEDEDEEEDD 211
             E+EE+EE+EEEEE+EE+E+EEE++
Sbjct:   213 EEEEEEEEEEEEEEEEEEEEEEEE 284

 Score = 94 (33.1 bits), Expect = 0.0073, P = 0.0072
 Identities = 15/25 (60%), Positives = 25/25 (100%), Frame = +3

Query:   190 EEDEEDEEEEEDEEDEDEEEDDDDE 214
             EE+EE+EEEEE+EE+E+EEE+++++
Sbjct:   213 EEEEEEEEEEEEEEEEEEEEEEEEK 287

 Score = 93 (32.7 bits), Expect = 0.0094, P = 0.0093
 Identities = 15/24 (62%), Positives = 24/24 (100%), Frame = +3

Query:   189 DEEDEEDEEEEEDEEDEDEEEDDD 212
             +EE+EE+EEEEE+EE+E+EEE+++
Sbjct:   213 EEEEEEEEEEEEEEEEEEEEEEEE 284

 Score = 92 (32.4 bits), Expect = 0.012, P = 0.012
 Identities = 15/29 (51%), Positives = 28/29 (96%), Frame = +3

Query:   181 KKKKEEEEDEEDEEDEEEEEDEEDEDEEE 209
             ++++EEEE+EE+EE+EEEEE+EE++ +++
Sbjct:   213 EEEEEEEEEEEEEEEEEEEEEEEEKKKKK 299

 Score = 86 (30.3 bits), Expect = 0.057, P = 0.056
 Identities = 22/48 (45%), Positives = 31/48 (64%), Frame = +1

Query:   178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEE---------------- 209
             E+ ++KKEEEE+EE+EE+EEEEE+EE+E+EEE                
Sbjct:   112 EQGEEKKEEEEEEEEEEEEEEEEEEEEEEEEEEEKKKKKKKKKKKKKK 255

 Score = 81 (28.5 bits), Expect = 0.21, P = 0.19
 Identities = 21/47 (44%), Positives = 30/47 (63%), Frame = +1

Query:   179 KSKKKKEEEEDEEDEEDEEEEEDEEDEDEEE---------------- 209
             + KK++EEEE+EE+EE+EEEEE+EE+E+EEE                
Sbjct:   121 EEKKEEEEEEEEEEEEEEEEEEEEEEEEEEEKKKKKKKKKKKKKKKK 261

 Score = 75 (26.4 bits), Expect = 2.9, P = 0.95
 Identities = 18/36 (50%), Positives = 25/36 (69%), Frame = +3

Query:   184 KEEEEDEEDEEDEEEEEDEEDEDEE----------- 208
             +EEEE+EE+EE+EEEEE+EE+E+EE           
Sbjct:   210 REEEEEEEEEEEEEEEEEEEEEEEEKKKKKKKKKKK 317


>Y15491 Pongo pygmaeus gene encoding fertilin alpha
        Length = 3081

  Plus Strand HSPs:

 Score = 144 (50.7 bits), Expect = 6.5e-07, P = 6.5e-07
 Identities = 28/47 (59%), Positives = 39/47 (82%), Frame = +1

Query:   166 KPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDD 212
             KP+AA+  V   EK +K++EEEE+EE EE+EEEEE+EE+E+EEE+ D
Sbjct:  2395 KPEAAE--VATEEKEEKEEEEEEEEEKEEEEEEEEEEEEEEEEEESD 2529

 Score = 129 (45.4 bits), Expect = 5.6e-05, P = 5.6e-05
 Identities = 24/52 (46%), Positives = 41/52 (78%), Frame = +1

Query:   163 AKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             A+  P A +     AE + ++KEE+E+EE+EE+E+EEE+EE+E+EEE++++E
Sbjct:  2365 AEALPPAPEIKPEAAEVATEEKEEKEEEEEEEEEKEEEEEEEEEEEEEEEEE 2520

 Score = 126 (44.4 bits), Expect = 0.00013, P = 0.00013
 Identities = 28/49 (57%), Positives = 38/49 (77%), Frame = +1

Query:   166 KPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             KP+AA+  V   EK +K++EEEE+EE EE+EEEEE+EE+E+EEE    E
Sbjct:  2395 KPEAAE--VATEEKEEKEEEEEEEEEKEEEEEEEEEEEEEEEEE----E 2523


>U00763 Rattus norvegicus clone2 polymeric immunoglobulin receptor mRNA 3'
        Length = 302

  Plus Strand HSPs:

 Score = 129 (45.4 bits), Expect = 6.8e-07, P = 6.8e-07
 Identities = 22/34 (64%), Positives = 33/34 (97%), Frame = +3

Query:   178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDD 211
             E+ ++KKEEEE+EE+EE+EEEEE+EE+E+EEE++
Sbjct:    87 EQGEEKKEEEEEEEEEEEEEEEEEEEEEEEEEEE 188

 Score = 122 (42.9 bits), Expect = 4.6e-06, P = 4.6e-06
 Identities = 21/45 (46%), Positives = 38/45 (84%), Frame = +3

Query:   170 AKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             +KK   K E+ +++++ EE +E+EE+EEEEE+EE+E+EEE++++E
Sbjct:    45 SKKQEEKEEQEQEEEQGEEKKEEEEEEEEEEEEEEEEEEEEEEEE 179

 Score = 120 (42.2 bits), Expect = 7.9e-06, P = 7.9e-06
 Identities = 21/31 (67%), Positives = 30/31 (96%), Frame = +3

Query:   179 KSKKKKEEEEDEEDEEDEEEEEDEEDEDEEE 209
             + KK++EEEE+EE+EE+EEEEE+EE+E+EEE
Sbjct:    96 EEKKEEEEEEEEEEEEEEEEEEEEEEEEEEE 188

 Score = 120 (42.2 bits), Expect = 7.9e-06, P = 7.9e-06
 Identities = 22/47 (46%), Positives = 40/47 (85%), Frame = +3

Query:   170 AKKGVVKAEKSKKKK--EEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             +KK   K E+ ++++  EE+++EE+EE+EEEEE+EE+E+EEE++++E
Sbjct:    45 SKKQEEKEEQEQEEEQGEEKKEEEEEEEEEEEEEEEEEEEEEEEEEE 185

 Score = 117 (41.2 bits), Expect = 1.8e-05, P = 1.8e-05
 Identities = 19/41 (46%), Positives = 36/41 (87%), Frame = +3

Query:   174 VVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             V K ++ K+++E+EE++ +E+ EEEEE+EE+E+EEE++++E
Sbjct:    42 VSKKQEEKEEQEQEEEQGEEKKEEEEEEEEEEEEEEEEEEE 164

 Score = 115 (40.5 bits), Expect = 3.1e-05, P = 3.1e-05
 Identities = 18/41 (43%), Positives = 36/41 (87%), Frame = +3

Query:   174 VVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             +V  ++ +K+++E+E+E+ EE +EEEE+EE+E+EEE++++E
Sbjct:    39 LVSKKQEEKEEQEQEEEQGEEKKEEEEEEEEEEEEEEEEEE 161

 Score = 106 (37.3 bits), Expect = 0.00033, P = 0.00033
 Identities = 18/37 (48%), Positives = 31/37 (83%), Frame = +3

Query:   178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             E   KK+EE+E++E EE++ EE+ EE+E+EEE++++E
Sbjct:    36 ELVSKKQEEKEEQEQEEEQGEEKKEEEEEEEEEEEEE 146

 Score = 102 (35.9 bits), Expect = 0.00094, P = 0.00094
 Identities = 22/40 (55%), Positives = 31/40 (77%), Frame = +3

Query:   178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEE-------- 209
             E+ ++KKEEEE+EE+EE+EEEEE+EE+E+EEE        
Sbjct:    87 EQGEEKKEEEEEEEEEEEEEEEEEEEEEEEEEEEKKKKKK 206

 Score = 100 (35.2 bits), Expect = 0.0016, P = 0.0016
 Identities = 22/41 (53%), Positives = 31/41 (75%), Frame = +3

Query:   178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEE--------- 209
             E+ ++KKEEEE+EE+EE+EEEEE+EE+E+EEE         
Sbjct:    87 EQGEEKKEEEEEEEEEEEEEEEEEEEEEEEEEEEKKKKKKK 209

 Score = 98 (34.5 bits), Expect = 0.0027, P = 0.0027
 Identities = 22/42 (52%), Positives = 31/42 (73%), Frame = +3

Query:   178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEE---------- 209
             E+ ++KKEEEE+EE+EE+EEEEE+EE+E+EEE          
Sbjct:    87 EQGEEKKEEEEEEEEEEEEEEEEEEEEEEEEEEEKKKKKKKK 212

 Score = 96 (33.8 bits), Expect = 0.0045, P = 0.0045
 Identities = 22/43 (51%), Positives = 31/43 (72%), Frame = +3

Query:   178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEE----------- 209
             E+ ++KKEEEE+EE+EE+EEEEE+EE+E+EEE           
Sbjct:    87 EQGEEKKEEEEEEEEEEEEEEEEEEEEEEEEEEEKKKKKKKKK 215

 Score = 86 (30.3 bits), Expect = 0.061, P = 0.059
 Identities = 22/48 (45%), Positives = 31/48 (64%), Frame = +3

Query:   178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEE---------------- 209
             E+ ++KKEEEE+EE+EE+EEEEE+EE+E+EEE                
Sbjct:    87 EQGEEKKEEEEEEEEEEEEEEEEEEEEEEEEEEEKKKKKKKKKKKKKK 230

 Score = 81 (28.5 bits), Expect = 0.22, P = 0.20
 Identities = 21/47 (44%), Positives = 30/47 (63%), Frame = +3

Query:   179 KSKKKKEEEEDEEDEEDEEEEEDEEDEDEEE---------------- 209
             + KK++EEEE+EE+EE+EEEEE+EE+E+EEE                
Sbjct:    96 EEKKEEEEEEEEEEEEEEEEEEEEEEEEEEEKKKKKKKKKKKKKKKK 236


>U01145 Rattus norvegicus clone 923 polymeric immunoglobulin receptor mRNA
        Length = 511

  Plus Strand HSPs:

 Score = 127 (44.7 bits), Expect = 6.8e-07, P = 6.8e-07
 Identities = 22/33 (66%), Positives = 32/33 (96%), Frame = +3

Query:   178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEED 210
             E+ ++KKEEEE+EE+EE+EEEEE+EE+E+EEE+
Sbjct:   276 EQGEEKKEEEEEEEEEEEEEEEEEEEEEEEEEE 374

 Score = 122 (42.9 bits), Expect = 8.1e-06, P = 8.1e-06
 Identities = 21/45 (46%), Positives = 38/45 (84%), Frame = +3

Query:   170 AKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             +KK   K E+ +++++ EE +E+EE+EEEEE+EE+E+EEE++++E
Sbjct:   234 SKKQEEKEEQEQEEEQGEEKKEEEEEEEEEEEEEEEEEEEEEEEE 368

 Score = 120 (42.2 bits), Expect = 2.8e-05, P = 2.8e-05
 Identities = 22/46 (47%), Positives = 39/46 (84%), Frame = +3

Query:   170 AKKGVVKAEKSKKKKE-EEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             +KK   K E+ +++++ EE+ EE+EE+EEEEE+EE+E+EEE++++E
Sbjct:   234 SKKQEEKEEQEQEEEQGEEKKEEEEEEEEEEEEEEEEEEEEEEEEE 371

 Score = 120 (42.2 bits), Expect = 2.8e-05, P = 2.8e-05
 Identities = 23/63 (36%), Positives = 45/63 (71%), Frame = +3

Query:   152 EKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDD 211
             +K+ K I  Y    +P   +  +V  ++ +K+++E+E+E+ EE +EEEE+EE+E+EEE++
Sbjct:   165 QKF-KVILGYLVSVRPAWNQ*ELVSKKQEEKEEQEQEEEQGEEKKEEEEEEEEEEEEEEE 341

Query:   212 DDE 214
             ++E
Sbjct:   342 EEE 350

 Score = 119 (41.9 bits), Expect = 4.3e-05, P = 4.3e-05
 Identities = 21/29 (72%), Positives = 29/29 (100%), Frame = +3

Query:   181 KKKKEEEEDEEDEEDEEEEEDEEDEDEEE 209
             +KK+EEEE+EE+EE+EEEEE+EE+E+EEE
Sbjct:   288 EKKEEEEEEEEEEEEEEEEEEEEEEEEEE 374

 Score = 117 (41.2 bits), Expect = 0.00011, P = 0.00011
 Identities = 19/41 (46%), Positives = 36/41 (87%), Frame = +3

Query:   174 VVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             V K ++ K+++E+EE++ +E+ EEEEE+EE+E+EEE++++E
Sbjct:   231 VSKKQEEKEEQEQEEEQGEEKKEEEEEEEEEEEEEEEEEEE 353

 Score = 116 (40.8 bits), Expect = 0.00016, P = 0.00016
 Identities = 19/30 (63%), Positives = 30/30 (100%), Frame = +2

Query:   185 EEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             EEEE+EE+EE+EEEEE+EE+E+EEE+++++
Sbjct:   374 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEK 463

 Score = 114 (40.1 bits), Expect = 0.00035, P = 0.00035
 Identities = 19/29 (65%), Positives = 29/29 (100%), Frame = +2

Query:   184 KEEEEDEEDEEDEEEEEDEEDEDEEEDDD 212
             +EEEE+EE+EE+EEEEE+EE+E+EEE+++
Sbjct:   374 EEEEEEEEEEEEEEEEEEEEEEEEEEEEE 460

 Score = 113 (39.8 bits), Expect = 0.00049, P = 0.00049
 Identities = 19/29 (65%), Positives = 29/29 (100%), Frame = +2

Query:   183 KKEEEEDEEDEEDEEEEEDEEDEDEEEDD 211
             ++EEEE+EE+EE+EEEEE+EE+E+EEE++
Sbjct:   374 EEEEEEEEEEEEEEEEEEEEEEEEEEEEE 460

 Score = 112 (39.4 bits), Expect = 0.00072, P = 0.00072
 Identities = 19/29 (65%), Positives = 29/29 (100%), Frame = +2

Query:   182 KKKEEEEDEEDEEDEEEEEDEEDEDEEED 210
             +++EEEE+EE+EE+EEEEE+EE+E+EEE+
Sbjct:   374 EEEEEEEEEEEEEEEEEEEEEEEEEEEEE 460

 Score = 111 (39.1 bits), Expect = 0.00099, P = 0.00099
 Identities = 19/29 (65%), Positives = 29/29 (100%), Frame = +2

Query:   181 KKKKEEEEDEEDEEDEEEEEDEEDEDEEE 209
             ++++EEEE+EE+EE+EEEEE+EE+E+EEE
Sbjct:   374 EEEEEEEEEEEEEEEEEEEEEEEEEEEEE 460

 Score = 107 (37.7 bits), Expect = 0.0036, P = 0.0036
 Identities = 18/29 (62%), Positives = 29/29 (100%), Frame = +2

Query:   181 KKKKEEEEDEEDEEDEEEEEDEEDEDEEE 209
             ++++EEEE+EE+EE+EEEEE+EE+E+EE+
Sbjct:   377 EEEEEEEEEEEEEEEEEEEEEEEEEEEEK 463

 Score = 102 (35.9 bits), Expect = 0.017, P = 0.017
 Identities = 22/40 (55%), Positives = 31/40 (77%), Frame = +3

Query:   178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEE-------- 209
             E+ ++KKEEEE+EE+EE+EEEEE+EE+E+EEE        
Sbjct:   276 EQGEEKKEEEEEEEEEEEEEEEEEEEEEEEEEEKKKKKKK 395

 Score = 100 (35.2 bits), Expect = 0.031, P = 0.031
 Identities = 22/41 (53%), Positives = 31/41 (75%), Frame = +3

Query:   178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEE--------- 209
             E+ ++KKEEEE+EE+EE+EEEEE+EE+E+EEE         
Sbjct:   276 EQGEEKKEEEEEEEEEEEEEEEEEEEEEEEEEEKKKKKKKK 398

 Score = 98 (34.5 bits), Expect = 0.058, P = 0.056
 Identities = 22/42 (52%), Positives = 31/42 (73%), Frame = +3

Query:   178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEE---------- 209
             E+ ++KKEEEE+EE+EE+EEEEE+EE+E+EEE          
Sbjct:   276 EQGEEKKEEEEEEEEEEEEEEEEEEEEEEEEEEKKKKKKKKK 401

 Score = 98 (34.5 bits), Expect = 0.059, P = 0.057
 Identities = 16/32 (50%), Positives = 30/32 (93%), Frame = +2

Query:   178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEE 209
             E+ ++++EEEE+EE+EE+EEEEE+EE++ +++
Sbjct:   380 EEEEEEEEEEEEEEEEEEEEEEEEEEEKKKKK 475

 Score = 96 (33.8 bits), Expect = 0.10, P = 0.097
 Identities = 22/43 (51%), Positives = 31/43 (72%), Frame = +3

Query:   178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEE----------- 209
             E+ ++KKEEEE+EE+EE+EEEEE+EE+E+EEE           
Sbjct:   276 EQGEEKKEEEEEEEEEEEEEEEEEEEEEEEEEEKKKKKKKKKK 404

 Score = 88 (31.0 bits), Expect = 1.1, P = 0.65
 Identities = 19/37 (51%), Positives = 29/37 (78%), Frame = +2

Query:   181 KKKKEEEEDEEDEEDEEEEEDEEDEDEEE-------- 209
             ++++EEEE+EE+EE+EEEEE+EE+E+EEE        
Sbjct:   374 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEKKKKKKKK 484

 Score = 86 (30.3 bits), Expect = 1.9, P = 0.84
 Identities = 22/48 (45%), Positives = 31/48 (64%), Frame = +3

Query:   178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEE---------------- 209
             E+ ++KKEEEE+EE+EE+EEEEE+EE+E+EEE                
Sbjct:   276 EQGEEKKEEEEEEEEEEEEEEEEEEEEEEEEEEKKKKKKKKKKKKKKK 419

 Score = 86 (30.3 bits), Expect = 1.9, P = 0.85
 Identities = 19/38 (50%), Positives = 29/38 (76%), Frame = +2

Query:   181 KKKKEEEEDEEDEEDEEEEEDEEDEDEEE--------- 209
             ++++EEEE+EE+EE+EEEEE+EE+E+EEE         
Sbjct:   374 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEKKKKKKKKK 487

 Score = 84 (29.6 bits), Expect = 3.4, P = 0.96
 Identities = 19/39 (48%), Positives = 29/39 (74%), Frame = +2

Query:   181 KKKKEEEEDEEDEEDEEEEEDEEDEDEEE---------- 209
             ++++EEEE+EE+EE+EEEEE+EE+E+EEE          
Sbjct:   374 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEKKKKKKKKKK 490

 Score = 82 (28.9 bits), Expect = 5.8, P = 1.0
 Identities = 19/40 (47%), Positives = 29/40 (72%), Frame = +2

Query:   181 KKKKEEEEDEEDEEDEEEEEDEEDEDEEE----------- 209
             ++++EEEE+EE+EE+EEEEE+EE+E+EEE           
Sbjct:   374 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEKKKKKKKKKKK 493


>X72957 X.laevis mRNA for nucleolin
        Length = 2580

  Plus Strand HSPs:

 Score = 134 (47.2 bits), Expect = 6.9e-07, Sum P(2) = 6.9e-07
 Identities = 64/222 (28%), Positives = 89/222 (40%), Frame = +1

Query:    21 TCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARYEREMKTYIPP 80
             TC        P   V  ++ +K  ++  K      K   +   + D      E +  +P 
Sbjct:     4 TCLSHLTNTTPAIMVKLAKGAKTQAKPKKAAPPPPKDMDDSDEEEDSEDESSEEEMEVPV 183

Query:    81 KGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADD- 139
             K    KK   P A   P  A     +   P  KG  PG   G  AKK         +D+ 
Sbjct:   184 KKTPAKKAATP-AKATPGKAATPAKATVTPGKKGATPGAKNGKQAKKQESEEEEDDSDEE 360

Query:   140 -----KQPYEKKAAKLKEKYEKDIAAY----RAKGKPDA----AKKGVVK---AEKSKKK 183
                  K+P  KKA   KE+ E+D          + KP A    AK   VK   A+KS  K
Sbjct:   361 DQKPIKKPIAKKAVAKKEESEEDDEDEDEDESEEEKPVAKRPLAKNPPVKVTPAKKSTGK 540

Query:   184 KEEEEDEEDEEDEEEE------------EDEEDEDEEEDDDDE 214
             K+E +DEEDE +EE+             + +E EDEE D+D+E
Sbjct:   541 KQESDDEEDESEEEKPVAKKPPAKKPAGKKQESEDEESDEDEE 669

 Score = 128 (45.1 bits), Expect = 7.1e-05, P = 7.1e-05
 Identities = 32/107 (29%), Positives = 56/107 (52%), Frame = +1

Query:   109 RPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKL----KEKYEKDIAAYRAK 164
             RP  K  +P + +    K  G+   +   +D+   EK  AK     K   +K  +     
Sbjct:   481 RPLAK--NPPVKVTPAKKSTGKKQESDDEEDESEEEKPVAKKPPAKKPAGKKQESEDEES 654

Query:   165 GKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
              + +     V  A+K KK    +  E+D++D+++++D++DED+EEDDDDE
Sbjct:   655 DEDEEEPMEVASAQKGKKTAPAKA-EDDDDDDDDDDDDDDEDDEEDDDDE 801

 Score = 107 (37.7 bits), Expect = 0.021, P = 0.021
 Identities = 24/70 (34%), Positives = 48/70 (68%), Frame = +1

Query:   140 KQPYEKKAAKLKEKYEKDIAAYRAKGKP---DAAKKGVVKAEKSKKKKEEEEDEEDEEDE 196
             K+P  KK A  K++ E D  +   + +P    +A+KG  K     K +++++D++D++D+
Sbjct:   595 KKPPAKKPAGKKQESE-DEESDEDEEEPMEVASAQKG--KKTAPAKAEDDDDDDDDDDDD 765

Query:   197 EEEEDEEDEDEEE 209
             ++E+DEED+D+E+
Sbjct:   766 DDEDDEEDDDDEQ 804

 Score = 106 (37.3 bits), Expect = 0.028, P = 0.027
 Identities = 32/89 (35%), Positives = 46/89 (51%), Frame = +1

Query:   140 KQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKK--KKEEEEDEEDEEDEE 197
             K P +K A   K    K  AA  AK      KKG     K+ K  KK+E E+EED+ DEE
Sbjct:   187 KTPAKKAATPAKATPGK--AATPAKATVTPGKKGATPGAKNGKQAKKQESEEEEDDSDEE 360

Query:   198 EEE--------------DEEDEDEEEDDDDE 214
             +++              +E +ED+E++D+DE
Sbjct:   361 DQKPIKKPIAKKAVAKKEESEEDDEDEDEDE 453

 Score = 91 (32.0 bits), Expect = 1.4, P = 0.76
 Identities = 22/58 (37%), Positives = 36/58 (62%), Frame = +1

Query:   146 KAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEE 203
             K AK +E  E++  +     KP   KK + K  K+  KKEE E+++++EDE+E E+E+
Sbjct:   307 KQAKKQESEEEEDDSDEEDQKP--IKKPIAK--KAVAKKEESEEDDEDEDEDESEEEK 468

 Score = 91 (32.0 bits), Expect = 1.4, P = 0.76
 Identities = 24/60 (40%), Positives = 35/60 (58%), Frame = +1

Query:   146 KAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDE 205
             K AK +E  E++  +     KP   KK + K   +KK    EE EED+EDE+E+E EE++
Sbjct:   307 KQAKKQESEEEEDDSDEEDQKP--IKKPIAKKAVAKK----EESEEDDEDEDEDESEEEK 468

 Score = 85 (29.9 bits), Expect = 6.8, P = 1.0
 Identities = 25/79 (31%), Positives = 48/79 (60%), Frame = +1

Query:   140 KQPYEKKAAKLKEKYEKDIAAYRAKGKP---DAAKKGVVKAEKSKKKKEEEEDEEDEEDE 196
             K+P  KK A  K++ E D  +   + +P    +A+KG  K     K +++++D++D++D+
Sbjct:   595 KKPPAKKPAGKKQESE-DEESDEDEEEPMEVASAQKG--KKTAPAKAEDDDDDDDDDDDD 765

Query:   197 EEEEDEEDEDEE---------E 209
             ++E+DEED+D+E         E
Sbjct:   766 DDEDDEEDDDDEQQGPAKRKKE 831

 Score = 50 (17.6 bits), Expect = 6.9e-07, Sum P(2) = 6.9e-07
 Identities = 10/21 (47%), Positives = 15/21 (71%), Frame = +2

Query:   194 EDEEEEEDEEDEDEEEDDDDE 214
             E+ E + +EED +EEE +D E
Sbjct:  2054 EEVEVDVEEEDLEEEEVEDSE 2116


>AC004073 Human Chromosome X, complete sequence.
          Length = 79,612

  Plus Strand HSPs:

 Score = 144 (50.7 bits), Expect = 8.0e-07, P = 8.0e-07
 Identities = 24/38 (63%), Positives = 37/38 (97%), Frame = +2

Query:   177 AEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             ++K KKK+EEEE+EE+EE+EEEEE+EE+E+EEE++++E
Sbjct:  1115 SQKKKKKEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 1228

 Score = 138 (48.6 bits), Expect = 5.0e-06, P = 5.0e-06
 Identities = 23/37 (62%), Positives = 36/37 (97%), Frame = +2

Query:   178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             +K KK++EEEE+EE+EE+EEEEE+EE+E+EEE++++E
Sbjct:  1121 KKKKKEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 1231

 Score = 134 (47.2 bits), Expect = 1.6e-05, P = 1.6e-05
 Identities = 22/39 (56%), Positives = 37/39 (94%), Frame = +2

Query:   176 KAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             K +K ++++EEEE+EE+EE+EEEEE+EE+E+EEE++++E
Sbjct:  1124 KKKKEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 1240

 Score = 134 (47.2 bits), Expect = 1.6e-05, P = 1.6e-05
 Identities = 22/39 (56%), Positives = 37/39 (94%), Frame = +2

Query:   176 KAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             K E+ ++++EEEE+EE+EE+EEEEE+EE+E+EEE++++E
Sbjct:  1130 KKEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 1246

 Score = 132 (46.5 bits), Expect = 2.9e-05, P = 2.9e-05
 Identities = 25/68 (36%), Positives = 49/68 (72%), Frame = +2

Query:   147 AAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDED 206
             A  L+   + +  + + K K +  ++   + E+ ++++EEEE+EE+EE+EEEEE+EE+E+
Sbjct:  1076 ATALQPGRQSETLSQKKKKKEEEEEEE--EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 1249

Query:   207 EEEDDDDE 214
             EEE++++E
Sbjct:  1250 EEEEEEEE 1273

 Score = 132 (46.5 bits), Expect = 2.9e-05, P = 2.9e-05
 Identities = 25/68 (36%), Positives = 49/68 (72%), Frame = +2

Query:   147 AAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDED 206
             A  L+   + +  + + K K +  ++   + E+ ++++EEEE+EE+EE+EEEEE+EE+E+
Sbjct:  1076 ATALQPGRQSETLSQKKKKKEEEEEE---EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 1246

Query:   207 EEEDDDDE 214
             EEE++++E
Sbjct:  1247 EEEEEEEE 1270

 Score = 128 (45.1 bits), Expect = 8.8e-05, P = 8.8e-05
 Identities = 25/70 (35%), Positives = 49/70 (70%), Frame = +2

Query:   147 AAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDED 206
             A  L+   + +  + + K K +  ++   + E+ ++++EEEE+EE+EE+EEEEE+EE+E+
Sbjct:  1076 ATALQPGRQSETLSQKKKKKEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 1255

Query:   207 EEEDDDDE-- 214
             EEE++++E  
Sbjct:  1256 EEEEEEEEGE 1285

 Score = 128 (45.1 bits), Expect = 8.8e-05, P = 8.8e-05
 Identities = 26/74 (35%), Positives = 50/74 (67%), Frame = +2

Query:   141 QPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEE 200
             QP  +++  L +K +K       + + +  ++   + E+ ++++EEEE+EE+EE+EEEEE
Sbjct:  1088 QP-GRQSETLSQKKKKKEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 1264

Query:   201 DEEDEDEEEDDDDE 214
             +EE+E EEE+ ++E
Sbjct:  1265 EEEEEGEEEEGEEE 1306

 Score = 127 (44.7 bits), Expect = 0.00011, P = 0.00011
 Identities = 21/37 (56%), Positives = 35/37 (94%), Frame = +2

Query:   178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             E+ ++++EEEE+EE+EE+EEEEE+EE+E+EEE+ ++E
Sbjct:  1181 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEGEEE 1291

 Score = 127 (44.7 bits), Expect = 0.00011, P = 0.00011
 Identities = 21/37 (56%), Positives = 35/37 (94%), Frame = +2

Query:   178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             E+ ++++EEEE+EE+EE+EEEEE+EE+E+EEE +++E
Sbjct:  1184 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEGEEEE 1294

 Score = 125 (44.0 bits), Expect = 0.00020, P = 0.00020
 Identities = 28/78 (35%), Positives = 50/78 (64%), Frame = +2

Query:   135 TAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEE 194
             TA    +  E  + K K+K E++      + + +  ++   + E+ ++++EEEE+EE+EE
Sbjct:  1079 TALQPGRQSETLSQKKKKKEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 1258

Query:   195 DEEEEED-EEDEDEEEDD 211
             +EEEEE+ EE+E EEE+D
Sbjct:  1259 EEEEEEEGEEEEGEEEED 1312

 Score = 124 (43.7 bits), Expect = 0.00026, P = 0.00026
 Identities = 28/80 (35%), Positives = 53/80 (66%), Frame = +2

Query:   135 TAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEE 194
             TA    +  E  + K K+K E++      + + +  ++   + E+ ++++EEEE+EE+EE
Sbjct:  1079 TALQPGRQSETLSQKKKKKEEEEEEEEEEEEEEEEEEEE--EEEEEEEEEEEEEEEEEEE 1252

Query:   195 DEEEEEDEEDEDEE-EDDDDE 214
             +EEEEE+EE E+EE E+++D+
Sbjct:  1253 EEEEEEEEEGEEEEGEEEEDQ 1315

 Score = 119 (41.9 bits), Expect = 0.0010, P = 0.0010
 Identities = 26/70 (37%), Positives = 47/70 (67%), Frame = +2

Query:   144 EKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEE 203
             +KK  K KE+ E++      + + +  ++   + E+ ++++EEEE+EE+EE+EEEE +EE
Sbjct:  1118 QKK--KKKEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEGEEE 1291

Query:   204 DEDEEEDDDD 213
             + +EEED  D
Sbjct:  1292 EGEEEEDQLD 1321

 Score = 106 (37.3 bits), Expect = 0.033, P = 0.032
 Identities = 23/66 (34%), Positives = 44/66 (66%), Frame = +2

Query:   144 EKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE--EEED 201
             +KK  K +E+ E++      + + +  ++   + E+ ++++EEEE+EE+EE+EE  EEE 
Sbjct:  1118 QKKKKKEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEGEEEEG 1297

Query:   202 EEDEDE 207
             EE+ED+
Sbjct:  1298 EEEEDQ 1315

 Score = 105 (37.0 bits), Expect = 0.043, P = 0.042
 Identities = 21/64 (32%), Positives = 43/64 (67%), Frame = +2

Query:   144 EKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEE 203
             +KK  + +E+ E++      + + +  ++   + E+ ++++EEEE+EE+EE+ EEEE EE
Sbjct:  1124 KKKKEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEGEEEEGEE 1303

Query:   204 DEDE 207
             +ED+
Sbjct:  1304 EEDQ 1315


>U93872 Kaposi's sarcoma-associated herpesvirus glycoprotein M, DNA
        Length = 133,661

  Minus Strand HSPs:

 Score = 144 (50.7 bits), Expect = 8.0e-07, P = 8.0e-07
 Identities = 30/82 (36%), Positives = 48/82 (58%), Frame = -3

Query:    133 NNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEED 192
              +N   DD++  E      ++  E D        + D  +      E+  ++ +EEEDEE+
Sbjct: 126621 DNDNKDDEEEQETDEEDEEDDEEDDEEDDEEDDEEDDEEDDEEDDEEDDEEDDEEEDEEE 126442

Query:    193 EEDEEEEEDEEDEDEEEDDDDE 214
              +E+E+EEEDEE+E++EEDDDDE
Sbjct: 126441 DEEEDEEEDEEEEEDEEDDDDE 126376

 Score = 136 (47.9 bits), Expect = 9.1e-06, P = 9.1e-06
 Identities = 30/97 (30%), Positives = 58/97 (59%), Frame = -3

Query:    119 LSIGDVAKKLGEMWNNTAADDK-QPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKA 177
              +SIG  +   G   ++TA         ++A+K +++  ++  A    G  + +K+  V  
Sbjct: 126804 ISIGSSSPSEGSWGDDTAMLVLLAEIAEEASKNEKECSENNQAGEDNGDNEISKESQVDK 126625

Query:    178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
              + +  K +EEE E DEEDEE++E++++ED+EEDD+++
Sbjct: 126624 DDNDNKDDEEEQETDEEDEEDDEEDDEEDDEEDDEED 126514

 Score = 135 (47.5 bits), Expect = 1.2e-05, P = 1.2e-05
 Identities = 30/83 (36%), Positives = 48/83 (57%), Frame = -3

Query:    133 NNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEED 192
              +N   DD++  E      ++  E D        + D  +      E+  ++ +EEEDEE+
Sbjct: 126621 DNDNKDDEEEQETDEEDEEDDEEDDEEDDEEDDEEDDEEDDEEDDEEDDEEDDEEEDEEE 126442

Query:    193 EEDEEEEEDEEDEDEEEDDDDE- 214
              +E+E+EEEDEE+E++EEDDDDE 
Sbjct: 126441 DEEEDEEEDEEEEEDEEDDDDED 126373

 Score = 132 (46.5 bits), Expect = 2.9e-05, P = 2.9e-05
 Identities = 21/37 (56%), Positives = 34/37 (91%), Frame = -3

Query:    178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
              E+ +++ EEE++EEDEE+EE+EED++DED E+++DDE
Sbjct: 126459 EEDEEEDEEEDEEEDEEEEEDEEDDDDEDNEDEEDDE 126349

 Score = 132 (46.5 bits), Expect = 2.9e-05, P = 2.9e-05
 Identities = 25/87 (28%), Positives = 55/87 (63%), Frame = -3

Query:    128 LGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEE 187
              L E+    + ++K+  E   A  ++  + +I+      K D   K   + +++ ++ EE+
Sbjct: 126738 LAEIAEEASKNEKECSENNQAG-EDNGDNEISKESQVDKDDNDNKDDEEEQETDEEDEED 126562

Query:    188 EDEEDEEDEEEEEDEEDEDEEEDDDDE 214
              ++E+DEED+EE+++E+DE+++E+DD+E
Sbjct: 126561 DEEDDEEDDEEDDEEDDEEDDEEDDEE 126481

 Score = 128 (45.1 bits), Expect = 8.8e-05, P = 8.8e-05
 Identities = 23/38 (60%), Positives = 34/38 (89%), Frame = -3

Query:    178 EKSKKKKEEEEDEEDEE-DEEEEEDEEDEDEEEDDDDE 214
              E  +++ EEE++EEDEE DEEEEEDEED+D+E+++D+E
Sbjct: 126471 EDDEEEDEEEDEEEDEEEDEEEEEDEEDDDDEDNEDEE 126358

 Score = 126 (44.4 bits), Expect = 0.00015, P = 0.00015
 Identities = 19/37 (51%), Positives = 35/37 (94%), Frame = -3

Query:    178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
              E+  ++++EEEDEE+EEDEE+++DE++EDEE+D++++
Sbjct: 126450 EEEDEEEDEEEDEEEEEDEEDDDDEDNEDEEDDEEED 126340

 Score = 118 (41.5 bits), Expect = 0.0014, P = 0.0014
 Identities = 21/38 (55%), Positives = 33/38 (86%), Frame = -3

Query:    178 EKSKKKKEEEEDEEDEEDE--EEEEDEEDEDEEEDDDD 213
              E  ++ +EEEEDEED++DE  E+EED+E+ED++ED++D
Sbjct: 126432 EDEEEDEEEEEDEEDDDDEDNEDEEDDEEEDKKEDEED 126319

 Score = 116 (40.8 bits), Expect = 0.0023, P = 0.0023
 Identities = 20/40 (50%), Positives = 35/40 (87%), Frame = -3

Query:    178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDD---E 214
              E+  ++++EEEDEE+EEDEE+++DE++EDEE+D+++   E
Sbjct: 126450 EEEDEEEDEEEDEEEEEDEEDDDDEDNEDEEDDEEEDKKE 126331

 Score = 105 (37.0 bits), Expect = 0.043, P = 0.042
 Identities = 21/41 (51%), Positives = 33/41 (80%), Frame = -3

Query:    178 EKSKKKKEEEEDEEDEEDE--EEEEDEEDEDEEEDDDD--- 213
              E  ++ +EEEEDEED++DE  E+EED+E+ED++ED++D   
Sbjct: 126432 EDEEEDEEEEEDEEDDDDEDNEDEEDDEEEDKKEDEEDGGD 126310

 Score = 91 (32.0 bits), Expect = 1.7, P = 0.81
 Identities = 10/37 (27%), Positives = 31/37 (83%), Frame = -3

Query:    178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
              ++ +++++E++ +E ++DE+E++DE+ +DE++  D++
Sbjct: 125841 QQDEQQQDEQQQDEQQQDEQEQQDEQQQDEQQQQDEQ 125731

 Score = 90 (31.7 bits), Expect = 2.2, P = 0.88
 Identities = 11/47 (23%), Positives = 35/47 (74%), Frame = -3

Query:    168 DAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
              D  ++   + ++ +++ E+++DE+ ++DE+E+++E+++ EE++  +E
Sbjct: 125820 DEQQQDEQQQDEQEQQDEQQQDEQQQQDEQEQQEEQEQQEEQEQQEE 125680

 Score = 87 (30.6 bits), Expect = 4.7, P = 0.99
 Identities = 17/35 (48%), Positives = 25/35 (71%), Frame = -2

Query:   175 VKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEE 209
             +  ++S  + E +EDEEDE DEEE +D ++EDE E
Sbjct: 68632 ISPDQSSGESEYDEDEEDE-DEEENDDVQEEDEPE 68531


>X54504 D. melanogaster mRNA for troponin-T (DNA region with mapped upheld,
        Length = 1362

  Plus Strand HSPs:

 Score = 142 (50.0 bits), Expect = 8.8e-07, P = 8.8e-07
 Identities = 33/102 (32%), Positives = 59/102 (57%), Frame = +2

Query:   113 KGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKK 172
             K ++ G     + K  GE     A + + P  ++ AK  E   +D          +  ++
Sbjct:   932 KEQYTGRQKSKLPKWFGERPGKKAGEPETPEGEEDAKADEDIVED---------DEEVEE 1084

Query:   173 GVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
              VV+ E  + +++EEE+EE+EE+EEEEE+EE+E+EEE++++E
Sbjct:  1085 EVVEEEDEEDEEDEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 1210

 Score = 138 (48.6 bits), Expect = 2.9e-06, P = 2.9e-06
 Identities = 59/192 (30%), Positives = 94/192 (48%), Frame = +2

Query:    31 PDASVNFSE--FSKKCSERWKTMSAKEKGKFEDMAKADKARYE-REMKTYIPPKGETK-- 85
             P A   F+E    +K  E W+ +   E  K++   +  +  Y+ +E+K     +   K  
Sbjct:   578 PLAIEGFAEAKLREKAQELWELIVKLETEKYDLEERQKRQDYDLKELKERQKQQLRHKAL 757

Query:    86 KKFKDPNA--PKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEM-WNNTAADDKQP 142
             KK  DP A   K PP       S+Y  ++       S  D  KKL E  W+  + D  + 
Sbjct:   758 KKGLDPEALTGKYPPK--IQVASKYERRVDTR----SYDD-KKKLFEGGWDEISKDSNEK 916

Query:   143 Y--EKK---AAKLKEKYEKDIAAYRAK--GKPDAAKKGVVKAEKSKKKKEEEEDEEDEE- 194
                EKK     + K K  K       K  G+P+  + G   A+  +   E++E+ E+E  
Sbjct:   917 IWNEKKEQYTGRQKSKLPKWFGERPGKKAGEPETPE-GEEDAKADEDIVEDDEEVEEEVV 1093

Query:   195 DEEEEEDEEDEDEEEDDDDE 214
             +EE+EEDEEDE+EEE++++E
Sbjct:  1094 EEEDEEDEEDEEEEEEEEEE 1153

 Score = 136 (47.9 bits), Expect = 5.4e-06, P = 5.4e-06
 Identities = 34/102 (33%), Positives = 59/102 (57%), Frame = +2

Query:   113 KGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKK 172
             K ++ G     + K  GE     A + + P  ++ AK  E   +D          +  ++
Sbjct:   932 KEQYTGRQKSKLPKWFGERPGKKAGEPETPEGEEDAKADEDIVED---------DEEVEE 1084

Query:   173 GVVKAEKSKKKK-EEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
              VV+ E  + ++ EEEE+EE+EE+EEEEE+EE+E+EEE++++E
Sbjct:  1085 EVVEEEDEEDEEDEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 1213

 Score = 119 (41.9 bits), Expect = 0.00066, P = 0.00066
 Identities = 29/95 (30%), Positives = 53/95 (55%), Frame = +2

Query:   113 KGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKK 172
             K ++ G     + K  GE     A + + P  ++ AK  E   +D      +   +  ++
Sbjct:   932 KEQYTGRQKSKLPKWFGERPGKKAGEPETPEGEEDAKADEDIVEDDEEVEEEVVEEEDEE 1111

Query:   173 GVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDE 207
                + E+ ++++EEEE+EE+EE+EEEEE+EE+E+E
Sbjct:  1112 DE-EDEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 1213


>L13025 Rattus norvegicus (clone 2) mRNA sequence, 3' end GAA-triplet
        Length = 214

  Plus Strand HSPs:

 Score = 129 (45.4 bits), Expect = 9.7e-07, P = 9.7e-07
 Identities = 22/34 (64%), Positives = 33/34 (97%), Frame = +3

Query:   178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDD 211
             E+ ++KKEEEE+EE+EE+EEEEE+EE+E+EEE++
Sbjct:    87 EQGEEKKEEEEEEEEEEEEEEEEEEEEEEEEEEE 188

 Score = 122 (42.9 bits), Expect = 6.6e-06, P = 6.6e-06
 Identities = 21/45 (46%), Positives = 38/45 (84%), Frame = +3

Query:   170 AKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             +KK   K E+ +++++ EE +E+EE+EEEEE+EE+E+EEE++++E
Sbjct:    45 SKKQEEKEEQEQEEEQGEEKKEEEEEEEEEEEEEEEEEEEEEEEE 179

 Score = 120 (42.2 bits), Expect = 1.1e-05, P = 1.1e-05
 Identities = 21/31 (67%), Positives = 30/31 (96%), Frame = +3

Query:   179 KSKKKKEEEEDEEDEEDEEEEEDEEDEDEEE 209
             + KK++EEEE+EE+EE+EEEEE+EE+E+EEE
Sbjct:    96 EEKKEEEEEEEEEEEEEEEEEEEEEEEEEEE 188

 Score = 120 (42.2 bits), Expect = 1.1e-05, P = 1.1e-05
 Identities = 22/47 (46%), Positives = 40/47 (85%), Frame = +3

Query:   170 AKKGVVKAEKSKKKK--EEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             +KK   K E+ ++++  EE+++EE+EE+EEEEE+EE+E+EEE++++E
Sbjct:    45 SKKQEEKEEQEQEEEQGEEKKEEEEEEEEEEEEEEEEEEEEEEEEEE 185

 Score = 118 (41.5 bits), Expect = 2.0e-05, P = 2.0e-05
 Identities = 20/34 (58%), Positives = 32/34 (94%), Frame = +3

Query:   176 KAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEE 209
             + E+ K+++EEEE+EE+EE+EEEEE+EE+E+EE+
Sbjct:    90 QGEEKKEEEEEEEEEEEEEEEEEEEEEEEEEEEK 191

 Score = 117 (41.2 bits), Expect = 2.5e-05, P = 2.5e-05
 Identities = 19/41 (46%), Positives = 36/41 (87%), Frame = +3

Query:   174 VVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             V K ++ K+++E+EE++ +E+ EEEEE+EE+E+EEE++++E
Sbjct:    42 VSKKQEEKEEQEQEEEQGEEKKEEEEEEEEEEEEEEEEEEE 164

 Score = 115 (40.5 bits), Expect = 4.4e-05, P = 4.4e-05
 Identities = 18/41 (43%), Positives = 36/41 (87%), Frame = +3

Query:   174 VVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             +V  ++ +K+++E+E+E+ EE +EEEE+EE+E+EEE++++E
Sbjct:    39 LVSKKQEEKEEQEQEEEQGEEKKEEEEEEEEEEEEEEEEEE 161

 Score = 113 (39.8 bits), Expect = 7.4e-05, P = 7.4e-05
 Identities = 19/32 (59%), Positives = 31/32 (96%), Frame = +3

Query:   178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEE 209
             EK ++++EEEE+EE+EE+EEEEE+EE+E+E++
Sbjct:    99 EKKEEEEEEEEEEEEEEEEEEEEEEEEEEEKK 194

 Score = 106 (37.3 bits), Expect = 0.00047, P = 0.00047
 Identities = 18/37 (48%), Positives = 31/37 (83%), Frame = +3

Query:   178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             E   KK+EE+E++E EE++ EE+ EE+E+EEE++++E
Sbjct:    36 ELVSKKQEEKEEQEQEEEQGEEKKEEEEEEEEEEEEE 146

 Score = 106 (37.3 bits), Expect = 0.00047, P = 0.00047
 Identities = 18/39 (46%), Positives = 34/39 (87%), Frame = +3

Query:   171 KKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEE 209
             ++G  K E+ ++++EEEE+EE+EE+EEEEE+EE++ +++
Sbjct:    87 EQGEEKKEEEEEEEEEEEEEEEEEEEEEEEEEEEKKKKK 203

 Score = 77 (27.1 bits), Expect = 0.87, P = 0.58
 Identities = 17/60 (28%), Positives = 40/60 (66%), Frame = +3

Query:   144 EKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEE 203
             E  + K +EK E++    + + K +  ++   + E+ ++++EEEE+EE+EE+EE+++ ++
Sbjct:    36 ELVSKKQEEKEEQEQEEEQGEEKKEEEEE---EEEEEEEEEEEEEEEEEEEEEEKKKKKK 206

 Score = 69 (24.3 bits), Expect = 6.8, P = 1.0
 Identities = 15/60 (25%), Positives = 40/60 (66%), Frame = +3

Query:   144 EKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEE 203
             E  + K +EK E++    + + K +  ++   + E+ ++++EEEE+EE+EE++++++ ++
Sbjct:    36 ELVSKKQEEKEEQEQEEEQGEEKKEEEEEEE-EEEEEEEEEEEEEEEEEEEEKKKKKKKK 212


>M24398 Human parathymosin mRNA, complete cds.
        Length = 1109

  Plus Strand HSPs:

 Score = 141 (49.6 bits), Expect = 9.8e-07, P = 9.8e-07
 Identities = 46/117 (39%), Positives = 63/117 (53%), Frame = +1

Query:    96 RPPSAFF-LFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKY 154
             RPPSA   L  S   P++    PG   G +++K  E     AA      E  A  LKEK 
Sbjct:   217 RPPSAVQGLSVSAPGPRLPAS-PGPGPGTMSEKSVE----AAA------ELSAKDLKEKK 363

Query:   155 EKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDD 212
             EK       K      KK VV+ E++  ++EEEE  ED E+E+E E+E++E+EEEDD+
Sbjct:   364 EK----VEEKASRKERKKEVVEEEENGAEEEEEETAEDGEEEDEGEEEDEEEEEEDDE 525

 Score = 127 (44.7 bits), Expect = 6.1e-05, P = 6.1e-05
 Identities = 32/71 (45%), Positives = 43/71 (60%), Frame = +1

Query:   144 EKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEE 203
             E  A  LKEK EK       K      KK VV+ E++  ++EEEE  ED   EEE+E EE
Sbjct:   331 ELSAKDLKEKKEK----VEEKASRKERKKEVVEEEENGAEEEEEETAED--GEEEDEGEE 492

Query:   204 DEDEEEDDDDE 214
             +++EEE++DDE
Sbjct:   493 EDEEEEEEDDE 525

 Score = 122 (42.9 bits), Expect = 0.00025, P = 0.00025
 Identities = 46/118 (38%), Positives = 64/118 (54%), Frame = +1

Query:    96 RPPSAFF-LFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKY 154
             RPPSA   L  S   P++    PG   G +++K  E     +A D +  EKK  K++EK 
Sbjct:   217 RPPSAVQGLSVSAPGPRLPAS-PGPGPGTMSEKSVEAAAELSAKDLK--EKKE-KVEEKA 384

Query:   155 EKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDED-------E 207
              +     R K   +  + G  + E+   +  EEEDE +EEDEEEEE E+DE        E
Sbjct:   385 SRK---ERKKEVVEEEENGAEEEEEETAEDGEEEDEGEEEDEEEEE-EDDEGPALKRAAE 552

Query:   208 EEDDDD 213
             EED+ D
Sbjct:   553 EEDEAD 570

 Score = 115 (40.5 bits), Expect = 0.0018, P = 0.0018
 Identities = 39/137 (28%), Positives = 63/137 (45%), Frame = +1

Query:    78 IPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAA 137
             +PP  ET+   + P   +R         + +RP+      GLS+     +L     +   
Sbjct:   130 LPPLPETQLAERPPLPCRRRRR----HRARFRPRPPSAVQGLSVSAPGPRLPA---SPGP 288

Query:   138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197
                   EK      E   KD+   + K +  A++K     E+ K+  EEEE+  +EE+EE
Sbjct:   289 GPGTMSEKSVEAAAELSAKDLKEKKEKVEEKASRK-----ERKKEVVEEEENGAEEEEEE 453

Query:   198 EEEDEEDEDEEEDDDDE 214
               ED E+EDE E++D+E
Sbjct:   454 TAEDGEEEDEGEEEDEE 504

 Score = 113 (39.8 bits), Expect = 0.0030, P = 0.0030
 Identities = 38/126 (30%), Positives = 66/126 (52%), Frame = +1

Query:    96 RPPSAFF-LFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADD----KQPYEKKAAKL 150
             RPPSA   L  S   P++    PG   G +++K  E     +A D    K+  E+KA++ 
Sbjct:   217 RPPSAVQGLSVSAPGPRLPAS-PGPGPGTMSEKSVEAAAELSAKDLKEKKEKVEEKASR- 390

Query:   151 KEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDE-------EEEEDEE 203
             KE+ +K++      G  +  ++     E+  + +EE+E+EE+E+DE        EEEDE 
Sbjct:   391 KER-KKEVVEEEENGAEEEEEETAEDGEEEDEGEEEDEEEEEEDDEGPALKRAAEEEDEA 567

Query:   204 DEDEEEDDD 212
             D   ++ ++
Sbjct:   568 DPKRQKTEN 594


>AB002381 Human mRNA for KIAA0383 gene, partial cds.
          Length = 5810

  Plus Strand HSPs:

 Score = 143 (50.3 bits), Expect = 1.0e-06, P = 1.0e-06
 Identities = 32/81 (39%), Positives = 53/81 (65%), Frame = +2

Query:   134 NTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDE 193
             +T A+ +Q   K   + K KY      +  + +P   ++G +  E SK+  EEEE+EEDE
Sbjct:  1421 STRANSRQSPAK--VQSKNKY-----LHSPESRPVTGERGQL-LELSKESSEEEEEEEDE 1576

Query:   194 EDEEEEEDEEDEDEEEDDDDE 214
             E+EEEEE+EE+++EEE++++E
Sbjct:  1577 EEEEEEEEEEEDEEEEEEEEE 1639

 Score = 139 (48.9 bits), Expect = 3.4e-06, P = 3.4e-06
 Identities = 31/81 (38%), Positives = 55/81 (67%), Frame = +2

Query:   134 NTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVV---KAEKSKKKKEEEEDE 190
             +T A+ +Q   K   + K KY      +  + +P   ++G +     E S++++EEE++E
Sbjct:  1421 STRANSRQSPAK--VQSKNKY-----LHSPESRPVTGERGQLLELSKESSEEEEEEEDEE 1579

Query:   191 EDEEDEEEEEDEEDEDEEEDDDDE 214
             E+EE+EEEEEDEE+E+EEE++++E
Sbjct:  1580 EEEEEEEEEEDEEEEEEEEEEEEE 1651

 Score = 127 (44.7 bits), Expect = 0.00011, P = 0.00011
 Identities = 29/79 (36%), Positives = 51/79 (64%), Frame = +2

Query:   134 NTAADDKQPYEKKAAKLKEKYEKDIAAYRA-KGKP-DAAKKGVVKAEKSKKKKEEEEDEE 191
             +T A+ +Q   K  +K K  +  +       +G+  + +K+   + E+ + ++EEEE+EE
Sbjct:  1421 STRANSRQSPAKVQSKNKYLHSPESRPVTGERGQLLELSKESSEEEEEEEDEEEEEEEEE 1600

Query:   192 DEEDEEEEEDEEDEDEEED 210
             +EEDEEEEE+EE+E+EEE+
Sbjct:  1601 EEEDEEEEEEEEEEEEEEN 1657

 Score = 121 (42.6 bits), Expect = 0.00055, P = 0.00055
 Identities = 30/80 (37%), Positives = 54/80 (67%), Frame = +2

Query:   134 NTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVV---KAEKSKKKKEEEEDE 190
             +T A+ +Q   K   + K KY      +  + +P   ++G +     E S++++EEE++E
Sbjct:  1421 STRANSRQSPAK--VQSKNKY-----LHSPESRPVTGERGQLLELSKESSEEEEEEEDEE 1579

Query:   191 EDEEDEEEEEDEEDEDEEEDDDD--- 213
             E+EE+EEEEEDEE+E+EEE++++   
Sbjct:  1580 EEEEEEEEEEDEEEEEEEEEEEEEEN 1657

 Score = 121 (42.6 bits), Expect = 0.00055, P = 0.00055
 Identities = 35/103 (33%), Positives = 58/103 (56%), Frame = +2

Query:   133 NNTAADDKQPYEKKAAKLKE------KYEKDIAAYRAKGKPDAAK---KGV--------- 174
             N   +++++  EK+A +L E      K E++I + RA  +   AK   K           
Sbjct:  1322 NAAVSEEEREAEKEAERLMEQASCWEKEEQEILSTRANSRQSPAKVQSKNKYLHSPESRP 1501

Query:   175 VKAEKSKK---KKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             V  E+ +     KE  E+EE+EEDEEEEE+EE+E+E+E++++E
Sbjct:  1502 VTGERGQLLELSKESSEEEEEEEDEEEEEEEEEEEEDEEEEEE 1630

 Score = 103 (36.3 bits), Expect = 0.068, P = 0.065
 Identities = 21/77 (27%), Positives = 43/77 (55%), Frame = +2

Query:   138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197
             ++++  E++  + +E+ E++      +  PD AK    +  +   +KE+    +D E+EE
Sbjct:  2399 EEEEEEEEEEEEEEEEGEEEEGGGNVEKDPDGAKSQEKEEPEISTEKEDSARLDDHEEEE 2578

Query:   198 EEEDEEDEDEEEDDDDE 214
             EE++E   +E+ D DDE
Sbjct:  2579 EEDEEPSHNEDHDADDE 2629

 Score = 98 (34.5 bits), Expect = 0.014, Sum P(2) = 0.014
 Identities = 18/25 (72%), Positives = 23/25 (92%), Frame = +2

Query:   184 KEEEEDEEDEEDEEEEEDEEDEDEE 208
             K EEE+EE+EE+EEEEE+EE E+EE
Sbjct:  2387 KPEEEEEEEEEEEEEEEEEEGEEEE 2461

 Score = 97 (34.1 bits), Expect = 0.33, P = 0.28
 Identities = 19/32 (59%), Positives = 25/32 (78%), Frame = +2

Query:   176 KAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDE 207
             K E    K EEEE+EE+EE+EEEEE+E +E+E
Sbjct:  2366 KPEDDLIKPEEEEEEEEEEEEEEEEEEGEEEE 2461

 Score = 97 (34.1 bits), Expect = 0.33, P = 0.28
 Identities = 22/42 (52%), Positives = 29/42 (69%), Frame = +2

Query:   176 KAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDE-----EEDDD 212
             K E    K EEEE+EE+EE+EEEEE+E +E+E     E+D D
Sbjct:  2366 KPEDDLIKPEEEEEEEEEEEEEEEEEEGEEEEGGGNVEKDPD 2491

 Score = 93 (32.7 bits), Expect = 0.92, P = 0.60
 Identities = 18/40 (45%), Positives = 29/40 (72%), Frame = +2

Query:   175 VKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             V    S  +K E++  + EE+EEEEE+EE+E+EEE+ ++E
Sbjct:  2339 VSPNTSPGEKPEDDLIKPEEEEEEEEEEEEEEEEEEGEEE 2458

 Score = 86 (30.3 bits), Expect = 5.7, P = 1.0
 Identities = 21/77 (27%), Positives = 41/77 (53%), Frame = +2

Query:   138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197
             ++++  E++     EK + D A  + K +P+ + +    A     ++EEEEDEE   +E+
Sbjct:  2435 EEEEGEEEEGGGNVEK-DPDGAKSQEKEEPEISTEKEDSARLDDHEEEEEEDEEPSHNED 2611

Query:   198 EEEDEEDEDEEEDDDDE 214
              + D+ED+   E  + E
Sbjct:  2612 HDADDEDDSHMESAEVE 2662

 Score = 56 (19.7 bits), Expect = 0.014, Sum P(2) = 0.014
 Identities = 23/106 (21%), Positives = 40/106 (37%), Frame = +2

Query:    90 DPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAK 149
             DP   + P   +   C   RPK KG      + + A ++   +       K   +++   
Sbjct:   119 DPPLSRMPKGMWI--CQVCRPKKKGRK---LLHEKAAQIKRRYAKPIGRPKNKLKQRLLS 283

Query:   150 LKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEED 195
             +    E  + A+  +G PD   K  +K E +       +D   EED
Sbjct:   284 VTSD-EGSMNAFTGRGSPDTEIKINIKQESADVNVIGNKDVVTEED 418


>U09820 Human helicase II (RAD54L) mRNA, complete cds.
        Length = 6115

  Plus Strand HSPs:

 Score = 143 (50.3 bits), Expect = 1.0e-06, P = 1.0e-06
 Identities = 30/78 (38%), Positives = 53/78 (67%), Frame = +3

Query:   137 ADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDE 196
             ++D+Q    ++AK K + E++  +Y+ K K    K   V+ + S + K   E+EE+E++E
Sbjct:  1662 SEDEQRPRTRSAK-KAELEENQRSYKQKKKRRRIK---VQEDSSSENKSNSEEEEEEKEE 1829

Query:   197 EEEEDEEDEDEEEDDDDE 214
             EEEE+EE+E+EEED++D+
Sbjct:  1830 EEEEEEEEEEEEEDENDD 1883

 Score = 138 (48.6 bits), Expect = 4.5e-06, P = 4.5e-06
 Identities = 31/78 (39%), Positives = 51/78 (65%), Frame = +3

Query:   137 ADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDE 196
             ++D+Q    ++AK K + E++  +Y+ K K    K     + ++K   EEEE EE EE+E
Sbjct:  1662 SEDEQRPRTRSAK-KAELEENQRSYKQKKKRRRIKVQEDSSSENKSNSEEEE-EEKEEEE 1835

Query:   197 EEEEDEEDEDEEEDDDDE 214
             EEEE+EE+E+E+E+DD +
Sbjct:  1836 EEEEEEEEEEEDENDDSK 1889


>M10668 Mouse DNA with homology to EBV IR3 repeat, segment 2, clone Mu2.
        Length = 451

  Plus Strand HSPs:

 Score = 126 (44.4 bits), Expect = 1.0e-06, P = 1.0e-06
 Identities = 22/77 (28%), Positives = 56/77 (72%), Frame = +2

Query:   138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197
             ++++  E++  K +E+ E++      + + +A ++   + E+ ++++EEE++EE+EE E+
Sbjct:    56 EEEEEQEQEQEKQEEE*EEE-QEEEEEQEEEAQEQEEEEQEQEEEEQEEEQEEEEEEQEQ 232

Query:   198 EEEDEEDEDEEEDDDDE 214
             EEE++E+E+E+E++++E
Sbjct:   233 EEEEQEEEEEQEEEEEE 283

 Score = 126 (44.4 bits), Expect = 1.0e-06, P = 1.0e-06
 Identities = 23/77 (29%), Positives = 51/77 (66%), Frame = +2

Query:   138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197
             + +Q  EK+  + +E+ E++        + +  ++   + E+ ++++EEEE++E EE+E+
Sbjct:    68 EQEQEQEKQEEE*EEEQEEEEEQEEEAQEQEEEEQEQEEEEQEEEQEEEEEEQEQEEEEQ 247

Query:   198 EEEDEEDEDEEEDDDDE 214
             EEE+E++E+EEE+ + E
Sbjct:   248 EEEEEQEEEEEEEQEQE 298

 Score = 126 (44.4 bits), Expect = 1.0e-06, P = 1.0e-06
 Identities = 20/77 (25%), Positives = 56/77 (72%), Frame = +2

Query:   138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197
             ++++  E++A + +E+ ++     + + + +  ++   + E+ ++++E+EE+EE+E+++E
Sbjct:   119 EEEEEQEEEAQEQEEEEQEQEEEEQEEEQEEEEEEQEQEEEEQEEEEEQEEEEEEEQEQE 298

Query:   198 EEEDEEDEDEEEDDDDE 214
             EEE EE+E++EE++++E
Sbjct:   299 EEEQEEEEEQEEEEEEE 349

 Score = 124 (43.7 bits), Expect = 1.8e-06, P = 1.8e-06
 Identities = 21/77 (27%), Positives = 53/77 (68%), Frame = +2

Query:   138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197
             ++++  E++  + +E+ E++      + + +  ++   + ++ ++++EEEE EE+EE+E+
Sbjct:   110 EEQEEEEEQEEEAQEQEEEEQEQEEEEQEEEQEEEEEEQEQEEEEQEEEEEQEEEEEEEQ 289

Query:   198 EEEDEEDEDEEEDDDDE 214
             E+E+EE E+EEE +++E
Sbjct:   290 EQEEEEQEEEEEQEEEE 340

 Score = 123 (43.3 bits), Expect = 2.3e-06, P = 2.3e-06
 Identities = 23/77 (29%), Positives = 53/77 (68%), Frame = +2

Query:   138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197
             ++++  E++  + +EK E++    + + + +  ++   + E+ ++++EEE++EE EE+EE
Sbjct:    44 EEQEEEEEEQEQEQEKQEEE*EEEQEE-EEEQEEEAQEQEEEEQEQEEEEQEEEQEEEEE 220

Query:   198 EEEDEEDEDEEEDDDDE 214
             E+E EE+E EEE++ +E
Sbjct:   221 EQEQEEEEQEEEEEQEE 271

 Score = 123 (43.3 bits), Expect = 2.3e-06, P = 2.3e-06
 Identities = 20/77 (25%), Positives = 54/77 (70%), Frame = +2

Query:   138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197
             +++Q  E++  +  ++ E++      + + +  ++   + E+ ++++EEEE++E+EE+EE
Sbjct:   107 EEEQEEEEEQEEEAQEQEEEEQEQEEEEQEEEQEEEEEEQEQEEEEQEEEEEQEEEEEEE 286

Query:   198 EEEDEEDEDEEEDDDDE 214
             +E++EE+++EEE+ ++E
Sbjct:   287 QEQEEEEQEEEEEQEEE 337

 Score = 119 (41.9 bits), Expect = 6.9e-06, P = 6.9e-06
 Identities = 20/77 (25%), Positives = 54/77 (70%), Frame = +2

Query:   138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197
             + ++  +++  + +E+ E++    + + + +  ++   + E+ ++++EEEE++E EE+E+
Sbjct:   131 EQEEEAQEQEEEEQEQEEEEQEEEQEEEEEEQEQEEEEQEEEEEQEEEEEEEQEQEEEEQ 310

Query:   198 EEEDEEDEDEEEDDDDE 214
             EEE+E++E+EEE+ ++E
Sbjct:   311 EEEEEQEEEEEEEGEEE 361

 Score = 117 (41.2 bits), Expect = 1.2e-05, P = 1.2e-05
 Identities = 22/76 (28%), Positives = 54/76 (71%), Frame = +2

Query:   139 DKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEE 198
             +KQ  E +  + +E+ +++ A  + + + +  ++   + E+ ++++EE+E EE+E++EEE
Sbjct:    86 EKQEEE*EEEQEEEEEQEEEAQEQEEEEQEQEEEE--QEEEQEEEEEEQEQEEEEQEEEE 259

Query:   199 EEDEEDEDEEEDDDDE 214
             E++EE+E+E+E +++E
Sbjct:   260 EQEEEEEEEQEQEEEE 307

 Score = 117 (41.2 bits), Expect = 1.2e-05, P = 1.2e-05
 Identities = 20/77 (25%), Positives = 52/77 (67%), Frame = +2

Query:   138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197
             ++ Q  E++  + +E+ +++      + +    ++   + E+ ++++EE+E EE+E++EE
Sbjct:   140 EEAQEQEEEEQEQEEEEQEEEQEEEEEEQEQEEEEQEEEEEQEEEEEEEQEQEEEEQEEE 319

Query:   198 EEEDEEDEDEEEDDDDE 214
             EE++EE+E+E E++++E
Sbjct:   320 EEQEEEEEEEGEEEEEE 370

 Score = 116 (40.8 bits), Expect = 1.5e-05, P = 1.5e-05
 Identities = 19/76 (25%), Positives = 54/76 (71%), Frame = +2

Query:   139 DKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEE 198
             ++Q  E++  + +++ E++      + + +  ++   +A++ +++++E+E+EE EE++EE
Sbjct:    32 EEQEEEQEEEEEEQEQEQEKQEEE*EEEQEEEEEQEEEAQEQEEEEQEQEEEEQEEEQEE 211

Query:   199 EEDEEDEDEEEDDDDE 214
             EE+E++++EEE +++E
Sbjct:   212 EEEEQEQEEEEQEEEE 259

 Score = 115 (40.5 bits), Expect = 2.0e-05, P = 2.0e-05
 Identities = 22/72 (30%), Positives = 47/72 (65%), Frame = +2

Query:   139 DKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEE 198
             +++  E++  + +E+ E++      + +    ++   + E+ ++++EEEE EE+EE EEE
Sbjct:   158 EEEEQEQEEEEQEEEQEEEEEEQEQEEEEQEEEEEQEEEEEEEQEQEEEEQEEEEEQEEE 337

Query:   199 EEDEEDEDEEED 210
             EE+E +E+EEE+
Sbjct:   338 EEEEGEEEEEEE 373

 Score = 115 (40.5 bits), Expect = 2.0e-05, P = 2.0e-05
 Identities = 21/74 (28%), Positives = 50/74 (67%), Frame = +2

Query:   140 KQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEE 199
             +Q  E++  + +E+ E+       + + +  ++   + E+ +++++E+E+EE EE+EE+E
Sbjct:   152 EQEEEEQEQEEEEQEEEQEEEEEEQEQEEEEQEEEEEQEEEEEEEQEQEEEEQEEEEEQE 331

Query:   200 EDEEDEDEEEDDDD 213
             E+EE+E EEE++++
Sbjct:   332 EEEEEEGEEEEEEE 373

 Score = 114 (40.1 bits), Expect = 2.6e-05, P = 2.6e-05
 Identities = 18/77 (23%), Positives = 55/77 (71%), Frame = +2

Query:   138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197
             ++++  +++  + +E+ E++    + K + +  ++   + E+ ++ +E+EE+E+++E+EE
Sbjct:    11 EEQEQEQEEQEEEQEEEEEEQEQEQEKQEEE*EEEQEEEEEQEEEAQEQEEEEQEQEEEE 190

Query:   198 EEEDEEDEDEEEDDDDE 214
             +EE++E+E+EE++ ++E
Sbjct:   191 QEEEQEEEEEEQEQEEE 241

 Score = 114 (40.1 bits), Expect = 2.6e-05, P = 2.6e-05
 Identities = 17/77 (22%), Positives = 53/77 (68%), Frame = +2

Query:   138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197
             + ++  E++  + +++ EK       + + +  ++   + ++ +++++EEE++E+E++EE
Sbjct:    35 EQEEEQEEEEEEQEQEQEKQEEE*EEEQEEEEEQEEEAQEQEEEEQEQEEEEQEEEQEEE 214

Query:   198 EEEDEEDEDEEEDDDDE 214
             EEE E++E+E+E+++++
Sbjct:   215 EEEQEQEEEEQEEEEEQ 265

 Score = 113 (39.8 bits), Expect = 3.4e-05, P = 3.4e-05
 Identities = 19/77 (24%), Positives = 52/77 (67%), Frame = +2

Query:   138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197
             +++Q  E++  + +++ E++      + + +  ++   + E+ +++ +E+E+EE E++EE
Sbjct:     8 EEEQEQEQEEQEEEQEEEEEEQEQEQEKQEEE*EEEQEEEEEQEEEAQEQEEEEQEQEEE 187

Query:   198 EEEDEEDEDEEEDDDDE 214
             E+E+E++E+EEE + +E
Sbjct:   188 EQEEEQEEEEEEQEQEE 238

 Score = 112 (39.4 bits), Expect = 4.5e-05, P = 4.5e-05
 Identities = 20/71 (28%), Positives = 49/71 (69%), Frame = +2

Query:   138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197
             +++Q  E++  + +++ E++      + + +  ++   + E+ ++++EE+E+EE++E+EE
Sbjct:   161 EEEQEQEEEEQEEEQEEEEEEQEQEEEEQEEEEEQEEEEEEEQEQEEEEQEEEEEQEEEE 340

Query:   198 EEEDEEDEDEE 208
             EEE EE+E+EE
Sbjct:   341 EEEGEEEEEEE 373

 Score = 112 (39.4 bits), Expect = 4.5e-05, P = 4.5e-05
 Identities = 18/76 (23%), Positives = 54/76 (71%), Frame = +2

Query:   139 DKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEE 198
             +++  E++  + +E+ E++    + + + +  ++   + E+  +++EEEE E++EE++EE
Sbjct:    20 EQEQEEQEEEQEEEEEEQEQEQEKQEEE*EEEQEEEEEQEEEAQEQEEEEQEQEEEEQEE 199

Query:   199 EEDEEDEDEEEDDDDE 214
             E++EE+E++E++++++
Sbjct:   200 EQEEEEEEQEQEEEEQ 247

 Score = 109 (38.4 bits), Expect = 0.00020, P = 0.00020
 Identities = 21/77 (27%), Positives = 51/77 (66%), Frame = +2

Query:   138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197
             +++Q  E++  + +E+ E++    + + K +   +   + E+ ++++ +E++EE++E EE
Sbjct:     8 EEEQEQEQEEQE-EEQEEEEEEQEQEQEKQEEE*EEEQEEEEEQEEEAQEQEEEEQEQEE 184

Query:   198 EEEDEEDEDEEEDDDDE 214
             EE++EE E+EEE+ + E
Sbjct:   185 EEQEEEQEEEEEEQEQE 235

 Score = 97 (34.1 bits), Expect = 0.042, P = 0.041
 Identities = 16/32 (50%), Positives = 26/32 (81%), Frame = +2

Query:   183 KKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             ++EEE+++E EE EEE+E+EE+E E+E +  E
Sbjct:     2 QEEEEQEQEQEEQEEEQEEEEEEQEQEQEKQE 97


>U72938 Human putative DNA dependent ATPase and helicase (ATRX) mRNA,
        Length = 10,212

  Plus Strand HSPs:

 Score = 143 (50.3 bits), Expect = 1.1e-06, P = 1.1e-06
 Identities = 30/78 (38%), Positives = 53/78 (67%), Frame = +2

Query:   137 ADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDE 196
             ++D+Q    ++AK K + E++  +Y+ K K    K   V+ + S + K   E+EE+E++E
Sbjct:  4283 SEDEQRPRTRSAK-KAELEENQRSYKQKKKRRRIK---VQEDSSSENKSNSEEEEEEKEE 4450

Query:   197 EEEEDEEDEDEEEDDDDE 214
             EEEE+EE+E+EEED++D+
Sbjct:  4451 EEEEEEEEEEEEEDENDD 4504

 Score = 138 (48.6 bits), Expect = 4.7e-06, P = 4.7e-06
 Identities = 31/78 (39%), Positives = 51/78 (65%), Frame = +2

Query:   137 ADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDE 196
             ++D+Q    ++AK K + E++  +Y+ K K    K     + ++K   EEEE EE EE+E
Sbjct:  4283 SEDEQRPRTRSAK-KAELEENQRSYKQKKKRRRIKVQEDSSSENKSNSEEEE-EEKEEEE 4456

Query:   197 EEEEDEEDEDEEEDDDDE 214
             EEEE+EE+E+E+E+DD +
Sbjct:  4457 EEEEEEEEEEEDENDDSK 4510


>U72937 Human putative DNA dependent ATPase and helicase (ATRX) mRNA,
        Length = 10,326

  Plus Strand HSPs:

 Score = 143 (50.3 bits), Expect = 1.1e-06, P = 1.1e-06
 Identities = 30/78 (38%), Positives = 53/78 (67%), Frame = +2

Query:   137 ADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDE 196
             ++D+Q    ++AK K + E++  +Y+ K K    K   V+ + S + K   E+EE+E++E
Sbjct:  4397 SEDEQRPRTRSAK-KAELEENQRSYKQKKKRRRIK---VQEDSSSENKSNSEEEEEEKEE 4564

Query:   197 EEEEDEEDEDEEEDDDDE 214
             EEEE+EE+E+EEED++D+
Sbjct:  4565 EEEEEEEEEEEEEDENDD 4618

 Score = 138 (48.6 bits), Expect = 4.7e-06, P = 4.7e-06
 Identities = 31/78 (39%), Positives = 51/78 (65%), Frame = +2

Query:   137 ADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDE 196
             ++D+Q    ++AK K + E++  +Y+ K K    K     + ++K   EEEE EE EE+E
Sbjct:  4397 SEDEQRPRTRSAK-KAELEENQRSYKQKKKRRRIKVQEDSSSENKSNSEEEE-EEKEEEE 4570

Query:   197 EEEEDEEDEDEEEDDDDE 214
             EEEE+EE+E+E+E+DD +
Sbjct:  4571 EEEEEEEEEEEDENDDSK 4624


>U75653 Human zinc finger helicase (Znf-HX) mRNA, complete cds.
        Length = 10,358

  Plus Strand HSPs:

 Score = 143 (50.3 bits), Expect = 1.1e-06, P = 1.1e-06
 Identities = 30/78 (38%), Positives = 53/78 (67%), Frame = +1

Query:   137 ADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDE 196
             ++D+Q    ++AK K + E++  +Y+ K K    K   V+ + S + K   E+EE+E++E
Sbjct:  4393 SEDEQRPRTRSAK-KAELEENQRSYKQKKKRRRIK---VQEDSSSENKSNSEEEEEEKEE 4560

Query:   197 EEEEDEEDEDEEEDDDDE 214
             EEEE+EE+E+EEED++D+
Sbjct:  4561 EEEEEEEEEEEEEDENDD 4614

 Score = 138 (48.6 bits), Expect = 4.7e-06, P = 4.7e-06
 Identities = 31/78 (39%), Positives = 51/78 (65%), Frame = +1

Query:   137 ADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDE 196
             ++D+Q    ++AK K + E++  +Y+ K K    K     + ++K   EEEE EE EE+E
Sbjct:  4393 SEDEQRPRTRSAK-KAELEENQRSYKQKKKRRRIKVQEDSSSENKSNSEEEE-EEKEEEE 4566

Query:   197 EEEEDEEDEDEEEDDDDE 214
             EEEE+EE+E+E+E+DD +
Sbjct:  4567 EEEEEEEEEEEDENDDSK 4620


>U72936 Human putative DNA dependent ATPase and helicase (ATRX) mRNA,
        Length = 10,448

  Plus Strand HSPs:

 Score = 143 (50.3 bits), Expect = 1.1e-06, P = 1.1e-06
 Identities = 30/78 (38%), Positives = 53/78 (67%), Frame = +1

Query:   137 ADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDE 196
             ++D+Q    ++AK K + E++  +Y+ K K    K   V+ + S + K   E+EE+E++E
Sbjct:  4519 SEDEQRPRTRSAK-KAELEENQRSYKQKKKRRRIK---VQEDSSSENKSNSEEEEEEKEE 4686

Query:   197 EEEEDEEDEDEEEDDDDE 214
             EEEE+EE+E+EEED++D+
Sbjct:  4687 EEEEEEEEEEEEEDENDD 4740

 Score = 138 (48.6 bits), Expect = 4.7e-06, P = 4.7e-06
 Identities = 31/78 (39%), Positives = 51/78 (65%), Frame = +1

Query:   137 ADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDE 196
             ++D+Q    ++AK K + E++  +Y+ K K    K     + ++K   EEEE EE EE+E
Sbjct:  4519 SEDEQRPRTRSAK-KAELEENQRSYKQKKKRRRIKVQEDSSSENKSNSEEEE-EEKEEEE 4692

Query:   197 EEEEDEEDEDEEEDDDDE 214
             EEEE+EE+E+E+E+DD +
Sbjct:  4693 EEEEEEEEEEEDENDDSK 4746


>U12534 Gallus gallus Sox11 transcription factor (Sox11) mRNA, complete
        Length = 1977

  Plus Strand HSPs:

 Score = 124 (43.7 bits), Expect = 0.00020, P = 0.00020
 Identities = 60/197 (30%), Positives = 84/197 (42%), Frame = +1

Query:    16 AFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARYEREMK 75
             AF V +  E  K       ++ +E SK+  +RWK +   EK  F  + +A++ R  + M 
Sbjct:   526 AFMVWSKIERRKIMEQSPDMHNAEISKRLGKRWKMLKDSEKIPF--IREAERLRL-KHMA 696

Query:    76 TYIPPKGETKKKFK-DPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNN 134
              Y   K   +KK K DP+A    P+A      E      G     S G    KL      
Sbjct:   697 DYPDYKYRPRKKPKMDPSAK---PNAGQ--SPEKNAPGGGSKSAKSSGKKCSKL----KA 849

Query:   135 TAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEE 194
              AA   +P  K A      Y  D   +        A K   KA K     EEEEDEEDE+
Sbjct:   850 AAASPPKPGAKAAPH--GDYAGDEYVF-------GALKVSSKAVKCVFVDEEEEDEEDED 1002

Query:   195 DEEEEEDEEDEDEEEDDD 212
             + +    +E +DEEED++
Sbjct:  1003 ELQLRIKQEADDEEEDEE 1056

 Score = 108 (38.0 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
 Identities = 26/91 (28%), Positives = 46/91 (50%), Frame = +1

Query:    95 KRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKY 154
             KRP +AF ++    R KI  + P +   +++K+LG+ W      +K P+ ++A +L+ K+
Sbjct:   511 KRPMNAFMVWSKIERRKIMEQSPDMHNAEISKRLGKRWKMLKDSEKIPFIREAERLRLKH 690

Query:   155 EKDIA--AYRAKGKPDAAKKGVVKAEKSKKK 183
               D     YR + KP         A +S +K
Sbjct:   691 MADYPDYKYRPRKKPKMDPSAKPNAGQSPEK 783

 Score = 79 (27.8 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
 Identities = 18/38 (47%), Positives = 26/38 (68%), Frame = +1

Query:   176 KAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDD 213
             KA K     EEEEDEEDE DE +   +++ D+EE+D++
Sbjct:   946 KAVKCVFVDEEEEDEEDE-DELQLRIKQEADDEEEDEE 1056


>M60858;J05584 Human nucleolin gene, complete cds.
            Length = 10,942

  Plus Strand HSPs:

 Score = 143 (50.3 bits), Expect = 1.1e-06, P = 1.1e-06
 Identities = 27/65 (41%), Positives = 48/65 (73%), Frame = +2

Query:   150 LKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEE 209
             L +  E+ +    AKGK  AAK   VKA+   + ++EEED+EDE+D+++E+DE+D+DE++
Sbjct:  4580 LSDSEEEAMETTPAKGKK-AAKVVPVKAKNVAEDEDEEEDDEDEDDDDDEDDEDDDDEDD 4756

Query:   210 DDDDE 214
             ++++E
Sbjct:  4757 EEEEE 4771

 Score = 136 (47.9 bits), Expect = 8.6e-06, P = 8.6e-06
 Identities = 29/67 (43%), Positives = 48/67 (71%), Frame = +2

Query:   150 LKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDE-- 207
             L +  E+ +    AKGK  AAK   VKA+   + ++EEED+EDE+D+++E+DE+D+DE  
Sbjct:  4580 LSDSEEEAMETTPAKGKK-AAKVVPVKAKNVAEDEDEEEDDEDEDDDDDEDDEDDDDEDD 4756

Query:   208 -EEDDDDE 214
              EE++++E
Sbjct:  4757 EEEEEEEE 4780

 Score = 118 (41.5 bits), Expect = 0.0013, P = 0.0013
 Identities = 24/46 (52%), Positives = 34/46 (73%), Frame = +1

Query:   171 KKGVV---KAEKSKK--KKEEEEDEEDEEDEEEEEDEEDEDEEEDD 211
             KKG     K  K+ K  KKE+ ++EED++ EE+EED+EDEDE+ED+
Sbjct:  3673 KKGAAIPAKGAKNGKNAKKEDSDEEEDDDSEEDEEDDEDEDEDEDE 3810

 Score = 116 (40.8 bits), Expect = 0.0022, P = 0.0022
 Identities = 21/46 (45%), Positives = 33/46 (71%), Frame = +1

Query:   171 KKGVVKAEKSKK--KKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             KKG     K  K  K  ++ED ++EED++ EEDEED+++E++D+DE
Sbjct:  3673 KKGAAIPAKGAKNGKNAKKEDSDEEEDDDSEEDEEDDEDEDEDEDE 3810

 Score = 94 (33.1 bits), Expect = 0.74, P = 0.52
 Identities = 27/91 (29%), Positives = 45/91 (49%), Frame = +1

Query:   117 PGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVK 176
             PG     +  K  +   N   +D    E   ++  E+ ++D      + +P AA K    
Sbjct:  3667 PGKKGAAIPAKGAKNGKNAKKEDSDEEEDDDSEEDEEDDEDEDEDEDEIEP-AAMKAAAA 3843

Query:   177 AEKSKKKKEEEEDEEDEEDEEEEEDEEDEDE 207
             A  S    E+E+DE+DE+DE++++DEED  E
Sbjct:  3844 APAS----EDEDDEDDEDDEDDDDDEEDGKE 3924

 Score = 92 (32.4 bits), Expect = 1.2, P = 0.71
 Identities = 26/81 (32%), Positives = 48/81 (59%), Frame = +1

Query:   145 KKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDE----------- 193
             KK A +  K  K+     AK K D+ ++    +E+ ++  E+E+++EDE           
Sbjct:  3673 KKGAAIPAKGAKN--GKNAK-KEDSDEEEDDDSEEDEEDDEDEDEDEDEIEPAAMKAAAA 3843

Query:   194 ----EDEEEEEDEEDEDEEEDDDD 213
                 EDE++E+DE+DED+++D++D
Sbjct:  3844 APASEDEDDEDDEDDEDDDDDEED 3915


>AF000299 Caenorhabditis elegans cosmid E03H12.
          Length = 19,216

  Plus Strand HSPs:

 Score = 143 (50.3 bits), Expect = 1.1e-06, P = 1.1e-06
 Identities = 34/78 (43%), Positives = 52/78 (66%), Frame = +1

Query:   137 ADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDE 196
             AD+K+  EKK  K  EK  KD      K K   +KK   K++KSKK K E++DE+ +ED+
Sbjct:  1450 ADEKKDEEKKDDKKDEK--KDEKKDEKKEKSKKSKKSS-KSKKSKKSKREKKDEDKKEDD 1620

Query:   197 EEEEDEEDEDEEEDD-DDE 214
             ++E+D++D+ +E+D  DDE
Sbjct:  1621 KKEDDKKDDKKEDDKKDDE 1677

 Score = 137 (48.2 bits), Expect = 6.7e-06, P = 6.7e-06
 Identities = 33/76 (43%), Positives = 52/76 (68%), Frame = +1

Query:   137 ADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDE 196
             AD+K+  EKK  K  EK  KD      K K   +KK   K++KSKK K E++DE+ +ED+
Sbjct:  1450 ADEKKDEEKKDDKKDEK--KDEKKDEKKEKSKKSKKSS-KSKKSKKSKREKKDEDKKEDD 1620

Query:   197 EEEEDEED---EDEEEDDD 212
             ++E+D++D   ED+++DD+
Sbjct:  1621 KKEDDKKDDKKEDDKKDDE 1677

 Score = 123 (43.3 bits), Expect = 0.00034, P = 0.00034
 Identities = 28/93 (30%), Positives = 55/93 (59%), Frame = +1

Query:   123 DVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKG-KPDAAKKGVVKAEKSK 181
             D  KK  +  +    +DK+  +K A + K++ +KD      K  K D  K+   K++KS 
Sbjct:  1378 DGDKKEDDKKDEKKDEDKKDEKKDADEKKDEEKKDDKKDEKKDEKKDEKKEKSKKSKKSS 1557

Query:   182 KKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             K K+ ++ + +++DE+++ED++ ED+++DD  E
Sbjct:  1558 KSKKSKKSKREKKDEDKKEDDKKEDDKKDDKKE 1656

 Score = 110 (38.7 bits), Expect = 0.011, P = 0.011
 Identities = 37/146 (25%), Positives = 68/146 (46%), Frame = +1

Query:    69 RYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKL 128
             +Y    K+   P     K    P AP  PP+A         P+     P       A   
Sbjct:  1144 QYFSSTKSLFRPPKSASKMGPPPPAPA-PPTA---------PEATPAAPAPDAAAAAPAE 1293

Query:   129 GEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEE 188
             GE  +     +K+  +KK  + K++ +KD        K +  KK     +K + KK+E++
Sbjct:  1294 GEKKDGDKKSEKKDGDKKEEEKKDEEKKD------GDKKEDDKKD---EKKDEDKKDEKK 1446

Query:   189 DEEDEEDEEEEEDEEDEDEEEDDDDE 214
             D ++++DEE+++D++DE ++E  D++
Sbjct:  1447 DADEKKDEEKKDDKKDEKKDEKKDEK 1524

 Score = 107 (37.7 bits), Expect = 0.025, P = 0.024
 Identities = 37/132 (28%), Positives = 63/132 (47%), Frame = +1

Query:    79 PPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAAD 138
             PPK  +K     P AP  PP+A         P+     P       A   GE  +     
Sbjct:  1177 PPKSASKMG-PPPPAPA-PPTA---------PEATPAAPAPDAAAAAPAEGEKKDGDKKS 1323

Query:   139 DKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEE 198
             +K+  +KK  + K++ +KD    +   K D  K    K EK  K  +E++DEE ++D+++
Sbjct:  1324 EKKDGDKKEEEKKDEEKKD-GDKKEDDKKDEKKDEDKKDEK--KDADEKKDEEKKDDKKD 1494

Query:   199 EEDEEDEDEEED 210
             E+ +E +DE+++
Sbjct:  1495 EKKDEKKDEKKE 1530


>X78993 S.cerevisiae genomic DNA 70kb region of the right arm of chromosome II.
        Length = 69,748

  Minus Strand HSPs:

 Score = 143 (50.3 bits), Expect = 1.1e-06, P = 1.1e-06
 Identities = 33/97 (34%), Positives = 52/97 (53%), Frame = -3

Query:    69 RYEREMKTYIPPKGETKKKFKDPNAPKRP---PSAFFLFCSEYRPKIKGEHPGLSIGDVA 125
             RY R  ++    KG  ++  ++     RP    SA+  F +E R  ++ E+P ++ G V 
Sbjct:  6719 RYGRN*RSKAT-KGTKEEDHQEKEGS*RP*ERLSAYMFFANENRDIVRSENPDVTFGQVG 6543

Query:   126 KKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRA 163
             + LGE W    A++KQPYE KA   K++YE +   Y A
Sbjct:  6542 RILGERWKALTAEEKQPYESKAQADKKRYESEKELYNA 6429

 Score = 136 (47.9 bits), Expect = 9.0e-06, P = 9.0e-06
 Identities = 27/71 (38%), Positives = 43/71 (60%), Frame = -3

Query:     7 KPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKAD 66
             +P  ++S+Y FF    R+  + ++PD  V F +  +   ERWK ++A+EK  +E  A+AD
Sbjct:  6641 RP*ERLSAYMFFANENRDIVRSENPD--VTFGQVGRILGERWKALTAEEKQPYESKAQAD 6468

Query:    67 KARYEREMKTY 77
             K RYE E + Y
Sbjct:  6467 KKRYESEKELY 6435

 Score = 45 (15.8 bits), Expect = 3.7e-06, Sum P(2) = 3.7e-06
 Identities = 11/36 (30%), Positives = 17/36 (47%), Frame = -3

Query:    39 EFSKKCSERWKTMSAKEKGKFEDMAKADKARYEREM 74
             E  +K +E W  M  + K KF +  K  + R   E+
Sbjct: 55757 EPGQKLNEEWDRMFEEYKTKFPEKGKELQRRLNGEL 55650


>Z73514;U00094 S.cerevisiae chromosome XVI reading frame ORF YPL158c
            Length = 3145

  Minus Strand HSPs:

 Score = 142 (50.0 bits), Expect = 1.2e-06, P = 1.2e-06
 Identities = 31/76 (40%), Positives = 50/76 (65%), Frame = -3

Query:   143 YEKKAAKLKEKYEKDIA-----AYRAKGKPDAAKKGV-VKAEKSKKKKEEEEDEEDEEDE 196
             Y  K+A+      +D+       Y A G       GV V+A++  +++E+E+DE+DEE+E
Sbjct:   815 YMNKSAETNSTIYEDLVDSLLTEYEADGSSSQIFDGVTVRADE--EEEEDEDDEDDEEEE 642

Query:   197 EEEEDEEDEDEEEDDDDE 214
             EE +DEEDE++EEDD+D+
Sbjct:   641 EENDDEEDEEDEEDDEDD 588

 Score = 137 (48.2 bits), Expect = 5.7e-06, P = 5.7e-06
 Identities = 29/79 (36%), Positives = 51/79 (64%), Frame = -3

Query:   143 YEKKAAKLKEKYEKDIA-----AYRAKGKPDAAKKGV-VKAEKSKKKKEEEEDEEDEEDE 196
             Y  K+A+      +D+       Y A G       GV V+A++ +++ E++ED+E+EE+E
Sbjct:   815 YMNKSAETNSTIYEDLVDSLLTEYEADGSSSQIFDGVTVRADEEEEEDEDDEDDEEEEEE 636

Query:   197 -EEEEDEEDEDEEEDDDDE 214
              ++EEDEEDE+++EDD++E
Sbjct:   635 NDDEEDEEDEEDDEDDEEE 579

 Score = 127 (44.7 bits), Expect = 9.7e-05, P = 9.7e-05
 Identities = 30/83 (36%), Positives = 47/83 (56%), Frame = -3

Query:   133 NNTAADDKQPYEKKAAKLKEKYEKDIAAYRA-KGKPDAAKKGVVKAEKSKKKKEEEEDEE 191
             N +A  +   YE     L  +YE D ++ +   G    A +   + E  +  +EEEE+ +
Sbjct:   809 NKSAETNSTIYEDLVDSLLTEYEADGSSSQIFDGVTVRADEEEEEDEDDEDDEEEEEEND 630

Query:   192 DEEDEEEEEDEEDEDEEEDDDDE 214
             DEEDEE+EED+ED++EEE+   E
Sbjct:   629 DEEDEEDEEDDEDDEEEEEKRKE 561

 Score = 116 (40.8 bits), Expect = 0.0020, P = 0.0020
 Identities = 29/85 (34%), Positives = 48/85 (56%), Frame = -3

Query:   133 NNTAADDKQPYEKKAAKLKEKYEKDIAAYRA-KGKPDAAKKGVVKAEKSKKKKEEEEDEE 191
             N +A  +   YE     L  +YE D ++ +   G    A +   + E  +  +EEEE+ +
Sbjct:   809 NKSAETNSTIYEDLVDSLLTEYEADGSSSQIFDGVTVRADEEEEEDEDDEDDEEEEEEND 630

Query:   192 DEEDEEEEEDEEDEDEEED---DDD 213
             DEEDEE+EED+ED++EEE+   + +
Sbjct:   629 DEEDEEDEEDDEDDEEEEEKRKEGE 555

 Score = 93 (32.7 bits), Expect = 0.86, P = 0.58
 Identities = 27/85 (31%), Positives = 46/85 (54%), Frame = -3

Query:   133 NNTAADDKQPYEKKAAKLKEKYEKDIAAYRA-KG---KPDAAKKGVVKAEKSKKKKEEEE 188
             N +A  +   YE     L  +YE D ++ +   G   + D  ++     E  ++++EE +
Sbjct:   809 NKSAETNSTIYEDLVDSLLTEYEADGSSSQIFDGVTVRADEEEEEDEDDEDDEEEEEEND 630

Query:   189 DEEDEEDEEEEEDEEDEDE------ 207
             DEEDEEDEE++ED+E+E+E      
Sbjct:   629 DEEDEEDEEDDEDDEEEEEKRKEGE 555


>L40039 Gallus gallus GAA microsatellite region.
        Length = 373

  Plus Strand HSPs:

 Score = 126 (44.4 bits), Expect = 1.2e-06, P = 1.2e-06
 Identities = 22/31 (70%), Positives = 30/31 (96%), Frame = +1

Query:   178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEE 208
             +K KKK+EEEE+EE+EE+EEEEE+EE+E+EE
Sbjct:   190 QKKKKKREEEEEEEEEEEEEEEEEEEEEEEE 282

 Score = 123 (43.3 bits), Expect = 2.8e-06, P = 2.8e-06
 Identities = 22/31 (70%), Positives = 29/31 (93%), Frame = +1

Query:   179 KSKKKKEEEEDEEDEEDEEEEEDEEDEDEEE 209
             + KKKK EEE+EE+EE+EEEEE+EE+E+EEE
Sbjct:   190 QKKKKKREEEEEEEEEEEEEEEEEEEEEEEE 282

 Score = 120 (42.2 bits), Expect = 6.4e-06, P = 6.4e-06
 Identities = 21/30 (70%), Positives = 29/30 (96%), Frame = +1

Query:   181 KKKKEEEEDEEDEEDEEEEEDEEDEDEEED 210
             KKKK+ EE+EE+EE+EEEEE+EE+E+EEE+
Sbjct:   193 KKKKKREEEEEEEEEEEEEEEEEEEEEEEE 282

 Score = 111 (39.1 bits), Expect = 7.1e-05, P = 7.1e-05
 Identities = 22/35 (62%), Positives = 30/35 (85%), Frame = +1

Query:   178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDD 212
             +K KKK+EEEE+EE+EE+EEEEE+EE+E+EE    
Sbjct:   190 QKKKKKREEEEEEEEEEEEEEEEEEEEEEEE---- 282

 Score = 109 (38.4 bits), Expect = 0.00012, P = 0.00012
 Identities = 22/36 (61%), Positives = 30/36 (83%), Frame = +1

Query:   178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDD 213
             +K KKK+EEEE+EE+EE+EEEEE+EE+E+EE     
Sbjct:   190 QKKKKKREEEEEEEEEEEEEEEEEEEEEEEE----- 282

 Score = 108 (38.0 bits), Expect = 0.00016, P = 0.00016
 Identities = 22/34 (64%), Positives = 29/34 (85%), Frame = +1

Query:   181 KKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             KKKK+ EE+EE+EE+EEEEE+EE+E+EEE    E
Sbjct:   193 KKKKKREEEEEEEEEEEEEEEEEEEEEEE----E 282


>AJ000496 Rattus norvegicus mRNA for cyclic nucleotide-gated cation channel
          Length = 4238

  Plus Strand HSPs:

 Score = 142 (50.0 bits), Expect = 1.3e-06, P = 1.3e-06
 Identities = 29/78 (37%), Positives = 54/78 (69%), Frame = +2

Query:   138 DDKQPYEKKAAKLKEKYEKDIAAY-RAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDE 196
             ++K+  EKK  K +EK EK+       + K +  +K   + ++ K++KEE+E++E+EE E
Sbjct:  1253 EEKREEEKKKEKEEEKKEKEEEENGEEEEKEEKEEKEEEEGKEEKEEKEEKEEKEEEEKE 1432

Query:   197 EEEEDEEDEDEEEDDDDE 214
             E+EE+E++E EEE++++E
Sbjct:  1433 EKEEEEKEEKEEEEEEEE 1486

 Score = 142 (50.0 bits), Expect = 1.3e-06, P = 1.3e-06
 Identities = 30/80 (37%), Positives = 54/80 (67%), Frame = +2

Query:   138 DDKQPYEKKAAK---LKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEE 194
             ++K+  EKK  K    KEK E++      K + +  ++   K EK +K+++EE++EE++E
Sbjct:  1253 EEKREEEKKKEKEEEKKEKEEEENGEEEEKEEKEEKEEEEGKEEKEEKEEKEEKEEEEKE 1432

Query:   195 DEEEEEDEEDEDEEEDDDDE 214
             ++EEEE EE E+EEE++++E
Sbjct:  1433 EKEEEEKEEKEEEEEEEEEE 1492

 Score = 138 (48.6 bits), Expect = 4.3e-06, P = 4.3e-06
 Identities = 31/72 (43%), Positives = 49/72 (68%), Frame = +2

Query:   138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197
             + K+  E++  + +EK EK+      +GK +  +K   K EK +++KEE+E+EE EE EE
Sbjct:  1295 EKKEKEEEENGEEEEKEEKE-EKEEEEGKEEKEEKEE-KEEKEEEEKEEKEEEEKEEKEE 1468

Query:   198 EEEDEEDEDEEE 209
             EEE+EE+E+EEE
Sbjct:  1469 EEEEEEEEEEEE 1504

 Score = 136 (47.9 bits), Expect = 7.9e-06, P = 7.9e-06
 Identities = 32/83 (38%), Positives = 56/83 (67%), Frame = +2

Query:   138 DDKQPYEKKAAKLKEKYEKDIAAY-RAKGKPDAAKK----GVV-KAEKSKKKKEEEEDEE 191
             ++K+  EKK  K +EK EK+       + K +  +K    G   K EK +K+++EEE++E
Sbjct:  1253 EEKREEEKKKEKEEEKKEKEEEENGEEEEKEEKEEKEEEEGKEEKEEKEEKEEKEEEEKE 1432

Query:   192 DEEDEEEEEDEEDEDEEEDDDDE 214
             ++E+EE+EE EE+E+EEE++++E
Sbjct:  1433 EKEEEEKEEKEEEEEEEEEEEEE 1501

 Score = 130 (45.8 bits), Expect = 4.4e-05, P = 4.4e-05
 Identities = 24/77 (31%), Positives = 52/77 (67%), Frame = +2

Query:   138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197
             ++K+  E+K  + K + EK       K + +  + G  + ++ K++KEEEE +E++E++E
Sbjct:  1220 EEKEEEEEKEEEEKREEEKKKEKEEEKKEKEEEENGEEEEKEEKEEKEEEEGKEEKEEKE 1399

Query:   198 EEEDEEDEDEEEDDDDE 214
             E+E++E+E++EE +++E
Sbjct:  1400 EKEEKEEEEKEEKEEEE 1450

 Score = 126 (44.4 bits), Expect = 0.00014, P = 0.00014
 Identities = 29/77 (37%), Positives = 50/77 (64%), Frame = +2

Query:   138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197
             ++K+  E++  + +EK E++      K + +  KK   + E+ KK+KEEEE+ E+EE EE
Sbjct:  1181 EEKEEEEEEKEEKEEKEEEEEKEEEEK-REEEKKK---EKEEEKKEKEEEENGEEEEKEE 1348

Query:   198 EEEDEEDEDEEEDDDDE 214
             +EE EE+E +EE ++ E
Sbjct:  1349 KEEKEEEEGKEEKEEKE 1399

 Score = 124 (43.7 bits), Expect = 0.00023, P = 0.00023
 Identities = 24/71 (33%), Positives = 48/71 (67%), Frame = +2

Query:   144 EKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEE 203
             E+K  + +EK EK+      + + +  ++   K EK ++KKE+EE+E  EE+E+EE++E+
Sbjct:  1181 EEKEEEEEEKEEKEEKEEEEEKEEEEKREEEKKKEKEEEKKEKEEEENGEEEEKEEKEEK 1360

Query:   204 DEDEEEDDDDE 214
             +E+E +++ +E
Sbjct:  1361 EEEEGKEEKEE 1393

 Score = 116 (40.8 bits), Expect = 0.0021, P = 0.0021
 Identities = 27/92 (29%), Positives = 54/92 (58%), Frame = +2

Query:   123 DVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKK 182
             D ++ + EM        +Q  E+   K +E+ EK+      + K +  +K   +  + +K
Sbjct:  1109 DESEAMVEMPRELPQIQEQQEEENEEKEEEEEEKE----EKEEKEEEEEKEEEEKREEEK 1276

Query:   183 KKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             KKE+EE+++++E+EE  E+EE E++EE +++E
Sbjct:  1277 KKEKEEEKKEKEEEENGEEEEKEEKEEKEEEE 1372

 Score = 107 (37.7 bits), Expect = 0.023, P = 0.022
 Identities = 20/49 (40%), Positives = 36/49 (73%), Frame = +2

Query:   164 KGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDD 212
             + +P+ A   + +  + +++KEEE+ EE+EE EEEEE EE+E++EE+ +
Sbjct:  1568 RAQPETAS--IQELPEEEEEKEEEKKEEEEEKEEEEEKEEEEEKEEEGE 1708

 Score = 104 (36.6 bits), Expect = 0.051, P = 0.050
 Identities = 18/30 (60%), Positives = 28/30 (93%), Frame = +2

Query:   178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDE 207
             EK ++KKEEEE++E+EE++EEEE++E+E E
Sbjct:  1619 EKEEEKKEEEEEKEEEEEKEEEEEKEEEGE 1708

 Score = 101 (35.6 bits), Expect = 0.11, P = 0.11
 Identities = 16/33 (48%), Positives = 31/33 (93%), Frame = +2

Query:   182 KKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             ++++EEE+EE EE+EEE+E++E+++EEE+ ++E
Sbjct:  1157 QEQQEEENEEKEEEEEEKEEKEEKEEEEEKEEE 1255

 Score = 100 (35.2 bits), Expect = 0.14, P = 0.13
 Identities = 17/31 (54%), Positives = 28/31 (90%), Frame = +2

Query:   184 KEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             +EEEE EE++++EEEE++EE+E EEE++ +E
Sbjct:  1607 EEEEEKEEEKKEEEEEKEEEEEKEEEEEKEE 1699

 Score = 99 (34.8 bits), Expect = 0.19, P = 0.17
 Identities = 17/30 (56%), Positives = 27/30 (90%), Frame = +2

Query:   185 EEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             EEEE++E+E+ EEEEE EE+E++EE+++ E
Sbjct:  1607 EEEEEKEEEKKEEEEEKEEEEEKEEEEEKE 1696

 Score = 99 (34.8 bits), Expect = 0.19, P = 0.17
 Identities = 17/46 (36%), Positives = 34/46 (73%), Frame = +2

Query:   168 DAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDD 213
             + A+      ++  +++EE+E+E+ EE+EE+EE+EE E+EEE +++
Sbjct:  1565 ERAQPETASIQELPEEEEEKEEEKKEEEEEKEEEEEKEEEEEKEEE 1702


>X17093 Human HLA-F gene for human leukocyte antigen F
        Length = 4316

  Plus Strand HSPs:

 Score = 142 (50.0 bits), Expect = 1.3e-06, P = 1.3e-06
 Identities = 26/63 (41%), Positives = 45/63 (71%), Frame = +2

Query:   152 EKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDD 211
             EK  +     R + K     +G  + E+ ++++EEEE+EE+EE+EEEEE+EE+E+EEE++
Sbjct:    80 EKKRRGAGRSRRRRKEGGEGEGEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 259

Query:   212 DDE 214
             ++E
Sbjct:   260 EEE 268

 Score = 133 (46.8 bits), Expect = 1.9e-05, P = 1.9e-05
 Identities = 22/51 (43%), Positives = 43/51 (84%), Frame = +2

Query:   164 KGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             +G+ +  ++   + E+ ++++EEEE+EE+EE+EEEEE+EE+E+EEE++++E
Sbjct:   140 EGEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 292

 Score = 132 (46.5 bits), Expect = 2.6e-05, P = 2.6e-05
 Identities = 22/50 (44%), Positives = 42/50 (84%), Frame = +2

Query:   165 GKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             G+ +  ++   + E+ ++++EEEE+EE+EE+EEEEE+EE+E+EEE++++E
Sbjct:   131 GEGEGEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 280

 Score = 132 (46.5 bits), Expect = 2.6e-05, P = 2.6e-05
 Identities = 22/51 (43%), Positives = 43/51 (84%), Frame = +2

Query:   164 KGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             +G+ +  ++   + E+ ++++EEEE+EE+EE+EEEEE+EE+E+EEE++++E
Sbjct:   134 EGEGEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 286

 Score = 132 (46.5 bits), Expect = 2.6e-05, P = 2.6e-05
 Identities = 23/53 (43%), Positives = 42/53 (79%), Frame = +2

Query:   162 RAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             R +G     ++   + E+ ++++EEEE+EE+EE+EEEEE+EE+E+EEE++++E
Sbjct:   119 RKEGGEGEGEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 277

 Score = 129 (45.4 bits), Expect = 5.9e-05, P = 5.9e-05
 Identities = 27/74 (36%), Positives = 52/74 (70%), Frame = +2

Query:   151 KEKYEKD--IAAYRAKGK--PDAAKKGVVKAEKSKKK------KEEEEDEEDEEDEEEEE 200
             K+K E++  ++ +   G   P+  ++G  ++ + +K+      +EEEE+EE+EE+EEEEE
Sbjct:    17 KKKKERNWSLSYFICSGTTFPEKKRRGAGRSRRRRKEGGEGEGEEEEEEEEEEEEEEEEE 196

Query:   201 DEEDEDEEEDDDDE 214
             +EE+E+EEE++++E
Sbjct:   197 EEEEEEEEEEEEEE 238

 Score = 117 (41.2 bits), Expect = 0.0016, P = 0.0016
 Identities = 20/32 (62%), Positives = 31/32 (96%), Frame = +2

Query:   178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEE 209
             E+ ++++EEEE+EE+EE+EEEEE+EE+E+EEE
Sbjct:   197 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 292


>J05138 Rabbit calcium binding protein (calreticulin) mRNA, complete cds.
        Length = 1865

  Plus Strand HSPs:

 Score = 141 (49.6 bits), Expect = 1.4e-06, P = 1.4e-06
 Identities = 36/97 (37%), Positives = 58/97 (59%), Frame = +1

Query:   118 GLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKA 177
             GL +  V  K G +++N    + + Y ++         K  A  + K K D  ++ + + 
Sbjct:  1003 GLDLWQV--KSGTIFDNFLITNDEAYAEEFGNETWGVTKT-AEKQMKDKQDEEQR-LKEE 1170

Query:   178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             E+ KK+KEEEE EEDEED++++EDE DEDEE+ D++E
Sbjct:  1171 EEEKKRKEEEEAEEDEEDKDDKEDE-DEDEEDKDEEE 1278

 Score = 137 (48.2 bits), Expect = 4.8e-06, P = 4.8e-06
 Identities = 37/94 (39%), Positives = 57/94 (60%), Frame = +1

Query:   118 GLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKA 177
             GL +  V  K G +++N    + + Y ++         K  A  + K K D  ++ + + 
Sbjct:  1003 GLDLWQV--KSGTIFDNFLITNDEAYAEEFGNETWGVTKT-AEKQMKDKQDEEQR-LKEE 1170

Query:   178 EKSKKKKEEEEDEEDEED----EEEEEDEEDEDEEEDD 211
             E+ KK+KEEEE EEDEED    E+E+EDEED+DEEE++
Sbjct:  1171 EEEKKRKEEEEAEEDEEDKDDKEDEDEDEEDKDEEEEE 1284

 Score = 116 (40.8 bits), Expect = 0.0017, P = 0.0017
 Identities = 38/103 (36%), Positives = 57/103 (55%), Frame = +1

Query:   118 GLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKA 177
             GL +  V  K G +++N    + + Y ++         K  A  + K K D  ++ + + 
Sbjct:  1003 GLDLWQV--KSGTIFDNFLITNDEAYAEEFGNETWGVTKT-AEKQMKDKQDEEQR-LKEE 1170

Query:   178 EKSKKKKEEEEDEEDEED----EEEEEDEEDEDEEE---------DD 211
             E+ KK+KEEEE EEDEED    E+E+EDEED+DEEE         D+
Sbjct:  1171 EEEKKRKEEEEAEEDEEDKDDKEDEDEDEEDKDEEEEEAAAGQAKDE 1311


>M32294 Human Ro ribonucleoprotein autoantigen (Ro/SS-A), complete cds.
        Length = 1890

  Plus Strand HSPs:

 Score = 141 (49.6 bits), Expect = 1.4e-06, P = 1.4e-06
 Identities = 33/97 (34%), Positives = 59/97 (60%), Frame = +1

Query:   118 GLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKA 177
             GL +  V  K G +++N    + + Y ++         K  A  + K K D  ++ + + 
Sbjct:  1009 GLDLWQV--KSGTIFDNFLITNDEAYAEEFGNETWGVTK-AAEKQMKDKQDEEQR-LKEE 1176

Query:   178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             E+ KK+KEEEE E+ E+DE+++EDEEDE+++E+D++E
Sbjct:  1177 EEDKKRKEEEEAEDKEDDEDKDEDEEDEEDKEEDEEE 1287

 Score = 132 (46.5 bits), Expect = 2.1e-05, P = 2.1e-05
 Identities = 35/95 (36%), Positives = 59/95 (62%), Frame = +1

Query:   118 GLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKA 177
             GL +  V  K G +++N    + + Y ++         K  A  + K K D  ++ + + 
Sbjct:  1009 GLDLWQV--KSGTIFDNFLITNDEAYAEEFGNETWGVTK-AAEKQMKDKQDEEQR-LKEE 1176

Query:   178 EKSKKKKEEEE--DEEDEED-EEEEEDEEDEDEEEDDD 212
             E+ KK+KEEEE  D+ED+ED +E+EEDEED++E+E++D
Sbjct:  1177 EEDKKRKEEEEAEDKEDDEDKDEDEEDEEDKEEDEEED 1290

 Score = 111 (39.1 bits), Expect = 0.0067, P = 0.0067
 Identities = 32/90 (35%), Positives = 53/90 (58%), Frame = +1

Query:   125 AKKLG-EMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKK 183
             A++ G E W  T A +KQ        +K+K +++    R K + +  K+   K E+  + 
Sbjct:  1081 AEEFGNETWGVTKAAEKQ--------MKDKQDEE---QRLKEEEEDKKR---KEEEEAED 1218

Query:   184 KEEEED-EEDEEDEEEEEDEEDEDEEEDDDDE 214
             KE++ED +EDEEDEE++E++E+ED      DE
Sbjct:  1219 KEDDEDKDEDEEDEEDKEEDEEEDVPGQAKDE 1314


>I09500 Sequence 4 from patent WO 8909273.
        Length = 1890

  Plus Strand HSPs:

 Score = 141 (49.6 bits), Expect = 1.4e-06, P = 1.4e-06
 Identities = 33/97 (34%), Positives = 59/97 (60%), Frame = +1

Query:   118 GLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKA 177
             GL +  V  K G +++N    + + Y ++         K  A  + K K D  ++ + + 
Sbjct:  1009 GLDLWQV--KSGTIFDNFLITNDEAYAEEFGNETWGVTK-AAEKQMKDKQDEEQR-LKEE 1176

Query:   178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             E+ KK+KEEEE E+ E+DE+++EDEEDE+++E+D++E
Sbjct:  1177 EEDKKRKEEEEAEDKEDDEDKDEDEEDEEDKEEDEEE 1287

 Score = 132 (46.5 bits), Expect = 2.1e-05, P = 2.1e-05
 Identities = 35/95 (36%), Positives = 59/95 (62%), Frame = +1

Query:   118 GLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKA 177
             GL +  V  K G +++N    + + Y ++         K  A  + K K D  ++ + + 
Sbjct:  1009 GLDLWQV--KSGTIFDNFLITNDEAYAEEFGNETWGVTK-AAEKQMKDKQDEEQR-LKEE 1176

Query:   178 EKSKKKKEEEE--DEEDEED-EEEEEDEEDEDEEEDDD 212
             E+ KK+KEEEE  D+ED+ED +E+EEDEED++E+E++D
Sbjct:  1177 EEDKKRKEEEEAEDKEDDEDKDEDEEDEEDKEEDEEED 1290

 Score = 111 (39.1 bits), Expect = 0.0067, P = 0.0067
 Identities = 32/90 (35%), Positives = 53/90 (58%), Frame = +1

Query:   125 AKKLG-EMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKK 183
             A++ G E W  T A +KQ        +K+K +++    R K + +  K+   K E+  + 
Sbjct:  1081 AEEFGNETWGVTKAAEKQ--------MKDKQDEE---QRLKEEEEDKKR---KEEEEAED 1218

Query:   184 KEEEED-EEDEEDEEEEEDEEDEDEEEDDDDE 214
             KE++ED +EDEEDEE++E++E+ED      DE
Sbjct:  1219 KEDDEDKDEDEEDEEDKEEDEEEDVPGQAKDE 1314


>M84739 Human autoantigen calreticulin mRNA, complete cds.
        Length = 1958

  Plus Strand HSPs:

 Score = 141 (49.6 bits), Expect = 1.4e-06, P = 1.4e-06
 Identities = 33/97 (34%), Positives = 59/97 (60%), Frame = +1

Query:   118 GLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKA 177
             GL +  V  K G +++N    + + Y ++         K  A  + K K D  ++ + + 
Sbjct:  1051 GLDLWQV--KSGTIFDNFLITNDEAYAEEFGNETWGVTK-AAEKQMKDKQDEEQR-LKEE 1218

Query:   178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             E+ KK+KEEEE E+ E+DE+++EDEEDE+++E+D++E
Sbjct:  1219 EEDKKRKEEEEAEDKEDDEDKDEDEEDEEDKEEDEEE 1329

 Score = 132 (46.5 bits), Expect = 2.1e-05, P = 2.1e-05
 Identities = 35/95 (36%), Positives = 59/95 (62%), Frame = +1

Query:   118 GLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKA 177
             GL +  V  K G +++N    + + Y ++         K  A  + K K D  ++ + + 
Sbjct:  1051 GLDLWQV--KSGTIFDNFLITNDEAYAEEFGNETWGVTK-AAEKQMKDKQDEEQR-LKEE 1218

Query:   178 EKSKKKKEEEE--DEEDEED-EEEEEDEEDEDEEEDDD 212
             E+ KK+KEEEE  D+ED+ED +E+EEDEED++E+E++D
Sbjct:  1219 EEDKKRKEEEEAEDKEDDEDKDEDEEDEEDKEEDEEED 1332

 Score = 111 (39.1 bits), Expect = 0.0068, P = 0.0068
 Identities = 32/90 (35%), Positives = 53/90 (58%), Frame = +1

Query:   125 AKKLG-EMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKK 183
             A++ G E W  T A +KQ        +K+K +++    R K + +  K+   K E+  + 
Sbjct:  1123 AEEFGNETWGVTKAAEKQ--------MKDKQDEE---QRLKEEEEDKKR---KEEEEAED 1260

Query:   184 KEEEED-EEDEEDEEEEEDEEDEDEEEDDDDE 214
             KE++ED +EDEEDEE++E++E+ED      DE
Sbjct:  1261 KEDDEDKDEDEEDEEDKEEDEEEDVPGQAKDE 1356


>Y13901 Homo sapiens FGFR-4 gene
        Length = 13,095

  Minus Strand HSPs:

 Score = 142 (50.0 bits), Expect = 1.5e-06, P = 1.5e-06
 Identities = 25/77 (32%), Positives = 56/77 (72%), Frame = -2

Query:   138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197
             ++++  E++  + +EK E++      + + +  ++   + E+ ++++EEEE+EE+EE+EE
Sbjct: 11465 EEEEEEEEEEEEQEEKEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 11286

Query:   198 EEEDEEDEDEEEDDDDE 214
             EEE+EE+E+EEE++++E
Sbjct: 11285 EEEEEEEEEEEEEEEEE 11235

 Score = 142 (50.0 bits), Expect = 1.5e-06, P = 1.5e-06
 Identities = 25/77 (32%), Positives = 56/77 (72%), Frame = -2

Query:   138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197
             ++++  E+K  + +E+ E++      + + +  ++   + E+ ++++EEEE+EE+EE+EE
Sbjct: 11444 EEEEEQEEKEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 11265

Query:   198 EEEDEEDEDEEEDDDDE 214
             EEE+EE+E+EEE++++E
Sbjct: 11264 EEEEEEEEEEEEEEEEE 11214

 Score = 141 (49.6 bits), Expect = 2.0e-06, P = 2.0e-06
 Identities = 25/77 (32%), Positives = 56/77 (72%), Frame = -2

Query:   138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197
             ++++  E++  + +E+ EK+      + + +  ++   + E+ ++++EEEE+EE+EE+EE
Sbjct: 11474 EEEEEEEEEEEEEEEQEEKEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 11295

Query:   198 EEEDEEDEDEEEDDDDE 214
             EEE+EE+E+EEE++++E
Sbjct: 11294 EEEEEEEEEEEEEEEEE 11244

 Score = 141 (49.6 bits), Expect = 2.0e-06, P = 2.0e-06
 Identities = 25/77 (32%), Positives = 56/77 (72%), Frame = -2

Query:   138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197
             ++++  E++  + KE+ E++      + + +  ++   + E+ ++++EEEE+EE+EE+EE
Sbjct: 11459 EEEEEEEEEEQEEKEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 11280

Query:   198 EEEDEEDEDEEEDDDDE 214
             EEE+EE+E+EEE++++E
Sbjct: 11279 EEEEEEEEEEEEEEEEE 11229

 Score = 141 (49.6 bits), Expect = 2.0e-06, P = 2.0e-06
 Identities = 25/77 (32%), Positives = 56/77 (72%), Frame = -2

Query:   138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197
             ++++  E++  K +E+ E++      + + +  ++   + E+ ++++EEEE+EE+EE+EE
Sbjct: 11453 EEEEEEEEQEEKEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 11274

Query:   198 EEEDEEDEDEEEDDDDE 214
             EEE+EE+E+EEE++++E
Sbjct: 11273 EEEEEEEEEEEEEEEEE 11223

 Score = 141 (49.6 bits), Expect = 2.0e-06, P = 2.0e-06
 Identities = 25/77 (32%), Positives = 56/77 (72%), Frame = -2

Query:   138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197
             ++++  EK+  + +E+ E++      + + +  ++   + E+ ++++EEEE+EE+EE+EE
Sbjct: 11441 EEEEQEEKEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 11262

Query:   198 EEEDEEDEDEEEDDDDE 214
             EEE+EE+E+EEE++++E
Sbjct: 11261 EEEEEEEEEEEEEEEEE 11211

 Score = 141 (49.6 bits), Expect = 2.0e-06, P = 2.0e-06
 Identities = 25/77 (32%), Positives = 56/77 (72%), Frame = -2

Query:   138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197
             ++K+  E++  + +E+ E++      + + +  ++   + E+ ++++EEEE+EE+EE+EE
Sbjct: 11426 EEKEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 11247

Query:   198 EEEDEEDEDEEEDDDDE 214
             EEE+EE+E+EEE++++E
Sbjct: 11246 EEEEEEEEEEEEEEEEE 11196

 Score = 141 (49.6 bits), Expect = 2.0e-06, P = 2.0e-06
 Identities = 25/77 (32%), Positives = 56/77 (72%), Frame = -2

Query:   138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197
             ++++  E++  + +E+ E++      + + +  ++   + E+ ++++EEEE+EE+EE+EE
Sbjct: 11309 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 11130

Query:   198 EEEDEEDEDEEEDDDDE 214
             EEE+EE+E+EEE+++DE
Sbjct: 11129 EEEEEEEEEEEEEEEDE 11079

 Score = 141 (49.6 bits), Expect = 2.0e-06, P = 2.0e-06
 Identities = 25/77 (32%), Positives = 56/77 (72%), Frame = -2

Query:   138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197
             ++++  E++  + +E+ E++      + + +  ++   + E+ ++++EEEE+EE+EE+EE
Sbjct: 11306 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 11127

Query:   198 EEEDEEDEDEEEDDDDE 214
             EEE+EE+E+EEE++D+E
Sbjct: 11126 EEEEEEEEEEEEEEDEE 11076

 Score = 140 (49.3 bits), Expect = 2.7e-06, P = 2.7e-06
 Identities = 25/79 (31%), Positives = 57/79 (72%), Frame = -2

Query:   136 AADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEED 195
             A ++++  E++  + +E+ E++      + + +  ++   + E+ ++++EEEE+EE+EE+
Sbjct: 11489 AEEEEEEEEEEEEEEEEEEEQEEKEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 11310

Query:   196 EEEEEDEEDEDEEEDDDDE 214
             EEEEE+EE+E+EEE++++E
Sbjct: 11309 EEEEEEEEEEEEEEEEEEE 11253

 Score = 138 (48.6 bits), Expect = 4.8e-06, P = 4.8e-06
 Identities = 24/77 (31%), Positives = 56/77 (72%), Frame = -2

Query:   138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197
             ++++  E++  + +E+ E++      + + +  ++   + E+ ++++EEEE+EE+EE+EE
Sbjct: 11456 EEEEEEEEEQEEKEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 11277

Query:   198 EEEDEEDEDEEEDDDDE 214
             EEE+EE+E+EEE++++E
Sbjct: 11276 EEEEEEEEEEEEEEEEE 11226

 Score = 137 (48.2 bits), Expect = 6.6e-06, P = 6.6e-06
 Identities = 24/77 (31%), Positives = 56/77 (72%), Frame = -2

Query:   138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197
             ++++  E++  + +E+ E++      + + +  ++   + E+ ++++EEEE+EE+EE+EE
Sbjct: 11468 EEEEEEEEEEEEEQEEKEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 11289

Query:   198 EEEDEEDEDEEEDDDDE 214
             EEE+EE+E+EEE++++E
Sbjct: 11288 EEEEEEEEEEEEEEEEE 11238

 Score = 137 (48.2 bits), Expect = 6.6e-06, P = 6.6e-06
 Identities = 24/77 (31%), Positives = 56/77 (72%), Frame = -2

Query:   138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197
             ++++  E++  + +E+ E++      + + +  ++   + E+ ++++EEEE+EE+EE+EE
Sbjct: 11450 EEEEEEEQEEKEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 11271

Query:   198 EEEDEEDEDEEEDDDDE 214
             EEE+EE+E+EEE++++E
Sbjct: 11270 EEEEEEEEEEEEEEEEE 11220

 Score = 137 (48.2 bits), Expect = 6.6e-06, P = 6.6e-06
 Identities = 24/77 (31%), Positives = 56/77 (72%), Frame = -2

Query:   138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197
             ++++  E++  + +E+ E++      + + +  ++   + E+ ++++EEEE+EE+EE+EE
Sbjct: 11435 EEQEEKEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 11256

Query:   198 EEEDEEDEDEEEDDDDE 214
             EEE+EE+E+EEE++++E
Sbjct: 11255 EEEEEEEEEEEEEEEEE 11205

 Score = 137 (48.2 bits), Expect = 6.6e-06, P = 6.6e-06
 Identities = 24/77 (31%), Positives = 56/77 (72%), Frame = -2

Query:   138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197
             ++++  E++  + +E+ E++      + + +  ++   + E+ ++++EEEE+EE+EE+EE
Sbjct: 11417 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 11238

Query:   198 EEEDEEDEDEEEDDDDE 214
             EEE+EE+E+EEE++++E
Sbjct: 11237 EEEEEEEEEEEEEEEEE 11187

 Score = 137 (48.2 bits), Expect = 6.6e-06, P = 6.6e-06
 Identities = 24/77 (31%), Positives = 56/77 (72%), Frame = -2

Query:   138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197
             ++++  E++  + +E+ E++      + + +  ++   + E+ ++++EEEE+EE+EE+EE
Sbjct: 11414 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 11235

Query:   198 EEEDEEDEDEEEDDDDE 214
             EEE+EE+E+EEE++++E
Sbjct: 11234 EEEEEEEEEEEEEEEEE 11184

 Score = 137 (48.2 bits), Expect = 6.6e-06, P = 6.6e-06
 Identities = 24/77 (31%), Positives = 56/77 (72%), Frame = -2

Query:   138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197
             ++++  E++  + +E+ E++      + + +  ++   + E+ ++++EEEE+EE+EE+EE
Sbjct: 11411 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 11232

Query:   198 EEEDEEDEDEEEDDDDE 214
             EEE+EE+E+EEE++++E
Sbjct: 11231 EEEEEEEEEEEEEEEEE 11181

 Score = 137 (48.2 bits), Expect = 6.6e-06, P = 6.6e-06
 Identities = 24/77 (31%), Positives = 56/77 (72%), Frame = -2

Query:   138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197
             ++++  E++  + +E+ E++      + + +  ++   + E+ ++++EEEE+EE+EE+EE
Sbjct: 11408 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 11229

Query:   198 EEEDEEDEDEEEDDDDE 214
             EEE+EE+E+EEE++++E
Sbjct: 11228 EEEEEEEEEEEEEEEEE 11178

 Score = 137 (48.2 bits), Expect = 6.6e-06, P = 6.6e-06
 Identities = 24/77 (31%), Positives = 56/77 (72%), Frame = -2

Query:   138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197
             ++++  E++  + +E+ E++      + + +  ++   + E+ ++++EEEE+EE+EE+EE
Sbjct: 11405 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 11226

Query:   198 EEEDEEDEDEEEDDDDE 214
             EEE+EE+E+EEE++++E
Sbjct: 11225 EEEEEEEEEEEEEEEEE 11175

 Score = 137 (48.2 bits), Expect = 6.6e-06, P = 6.6e-06
 Identities = 24/77 (31%), Positives = 56/77 (72%), Frame = -2

Query:   138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197
             ++++  E++  + +E+ E++      + + +  ++   + E+ ++++EEEE+EE+EE+EE
Sbjct: 11402 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 11223

Query:   198 EEEDEEDEDEEEDDDDE 214
             EEE+EE+E+EEE++++E
Sbjct: 11222 EEEEEEEEEEEEEEEEE 11172

 Score = 137 (48.2 bits), Expect = 6.6e-06, P = 6.6e-06
 Identities = 24/77 (31%), Positives = 56/77 (72%), Frame = -2

Query:   138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197
             ++++  E++  + +E+ E++      + + +  ++   + E+ ++++EEEE+EE+EE+EE
Sbjct: 11399 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 11220

Query:   198 EEEDEEDEDEEEDDDDE 214
             EEE+EE+E+EEE++++E
Sbjct: 11219 EEEEEEEEEEEEEEEEE 11169

 Score = 137 (48.2 bits), Expect = 6.6e-06, P = 6.6e-06
 Identities = 24/77 (31%), Positives = 56/77 (72%), Frame = -2

Query:   138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197
             ++++  E++  + +E+ E++      + + +  ++   + E+ ++++EEEE+EE+EE+EE
Sbjct: 11396 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 11217

Query:   198 EEEDEEDEDEEEDDDDE 214
             EEE+EE+E+EEE++++E
Sbjct: 11216 EEEEEEEEEEEEEEEEE 11166

 Score = 137 (48.2 bits), Expect = 6.6e-06, P = 6.6e-06
 Identities = 24/77 (31%), Positives = 56/77 (72%), Frame = -2

Query:   138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197
             ++++  E++  + +E+ E++      + + +  ++   + E+ ++++EEEE+EE+EE+EE
Sbjct: 11393 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 11214

Query:   198 EEEDEEDEDEEEDDDDE 214
             EEE+EE+E+EEE++++E
Sbjct: 11213 EEEEEEEEEEEEEEEEE 11163

 Score = 137 (48.2 bits), Expect = 6.6e-06, P = 6.6e-06
 Identities = 24/77 (31%), Positives = 56/77 (72%), Frame = -2

Query:   138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197
             ++++  E++  + +E+ E++      + + +  ++   + E+ ++++EEEE+EE+EE+EE
Sbjct: 11390 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 11211

Query:   198 EEEDEEDEDEEEDDDDE 214
             EEE+EE+E+EEE++++E
Sbjct: 11210 EEEEEEEEEEEEEEEEE 11160

 Score = 137 (48.2 bits), Expect = 6.6e-06, P = 6.6e-06
 Identities = 24/77 (31%), Positives = 56/77 (72%), Frame = -2

Query:   138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197
             ++++  E++  + +E+ E++      + + +  ++   + E+ ++++EEEE+EE+EE+EE
Sbjct: 11387 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 11208

Query:   198 EEEDEEDEDEEEDDDDE 214
             EEE+EE+E+EEE++++E
Sbjct: 11207 EEEEEEEEEEEEEEEEE 11157

 Score = 137 (48.2 bits), Expect = 6.6e-06, P = 6.6e-06
 Identities = 24/77 (31%), Positives = 56/77 (72%), Frame = -2

Query:   138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197
             ++++  E++  + +E+ E++      + + +  ++   + E+ ++++EEEE+EE+EE+EE
Sbjct: 11384 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 11205

Query:   198 EEEDEEDEDEEEDDDDE 214
             EEE+EE+E+EEE++++E
Sbjct: 11204 EEEEEEEEEEEEEEEEE 11154

 Score = 137 (48.2 bits), Expect = 6.6e-06, P = 6.6e-06
 Identities = 24/77 (31%), Positives = 56/77 (72%), Frame = -2

Query:   138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197
             ++++  E++  + +E+ E++      + + +  ++   + E+ ++++EEEE+EE+EE+EE
Sbjct: 11381 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 11202

Query:   198 EEEDEEDEDEEEDDDDE 214
             EEE+EE+E+EEE++++E
Sbjct: 11201 EEEEEEEEEEEEEEEEE 11151

 Score = 137 (48.2 bits), Expect = 6.6e-06, P = 6.6e-06
 Identities = 24/77 (31%), Positives = 56/77 (72%), Frame = -2

Query:   138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197
             ++++  E++  + +E+ E++      + + +  ++   + E+ ++++EEEE+EE+EE+EE
Sbjct: 11378 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 11199

Query:   198 EEEDEEDEDEEEDDDDE 214
             EEE+EE+E+EEE++++E
Sbjct: 11198 EEEEEEEEEEEEEEEEE 11148

 Score = 137 (48.2 bits), Expect = 6.6e-06, P = 6.6e-06
 Identities = 24/77 (31%), Positives = 56/77 (72%), Frame = -2

Query:   138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197
             ++++  E++  + +E+ E++      + + +  ++   + E+ ++++EEEE+EE+EE+EE
Sbjct: 11375 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 11196

Query:   198 EEEDEEDEDEEEDDDDE 214
             EEE+EE+E+EEE++++E
Sbjct: 11195 EEEEEEEEEEEEEEEEE 11145

 Score = 137 (48.2 bits), Expect = 6.6e-06, P = 6.6e-06
 Identities = 24/77 (31%), Positives = 56/77 (72%), Frame = -2

Query:   138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197
             ++++  E++  + +E+ E++      + + +  ++   + E+ ++++EEEE+EE+EE+EE
Sbjct: 11372 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 11193

Query:   198 EEEDEEDEDEEEDDDDE 214
             EEE+EE+E+EEE++++E
Sbjct: 11192 EEEEEEEEEEEEEEEEE 11142

 Score = 137 (48.2 bits), Expect = 6.6e-06, P = 6.6e-06
 Identities = 24/77 (31%), Positives = 56/77 (72%), Frame = -2

Query:   138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197
             ++++  E++  + +E+ E++      + + +  ++   + E+ ++++EEEE+EE+EE+EE
Sbjct: 11369 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 11190

Query:   198 EEEDEEDEDEEEDDDDE 214
             EEE+EE+E+EEE++++E
Sbjct: 11189 EEEEEEEEEEEEEEEEE 11139

 Score = 137 (48.2 bits), Expect = 6.6e-06, P = 6.6e-06
 Identities = 24/77 (31%), Positives = 56/77 (72%), Frame = -2

Query:   138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197
             ++++  E++  + +E+ E++      + + +  ++   + E+ ++++EEEE+EE+EE+EE
Sbjct: 11366 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 11187

Query:   198 EEEDEEDEDEEEDDDDE 214
             EEE+EE+E+EEE++++E
Sbjct: 11186 EEEEEEEEEEEEEEEEE 11136

 Score = 137 (48.2 bits), Expect = 6.6e-06, P = 6.6e-06
 Identities = 24/77 (31%), Positives = 56/77 (72%), Frame = -2

Query:   138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197
             ++++  E++  + +E+ E++      + + +  ++   + E+ ++++EEEE+EE+EE+EE
Sbjct: 11363 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 11184

Query:   198 EEEDEEDEDEEEDDDDE 214
             EEE+EE+E+EEE++++E
Sbjct: 11183 EEEEEEEEEEEEEEEEE 11133

 Score = 137 (48.2 bits), Expect = 6.6e-06, P = 6.6e-06
 Identities = 24/77 (31%), Positives = 56/77 (72%), Frame = -2

Query:   138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197
             ++++  E++  + +E+ E++      + + +  ++   + E+ ++++EEEE+EE+EE+EE
Sbjct: 11360 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 11181

Query:   198 EEEDEEDEDEEEDDDDE 214
             EEE+EE+E+EEE++++E
Sbjct: 11180 EEEEEEEEEEEEEEEEE 11130

 Score = 137 (48.2 bits), Expect = 6.6e-06, P = 6.6e-06
 Identities = 24/77 (31%), Positives = 56/77 (72%), Frame = -2

Query:   138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197
             ++++  E++  + +E+ E++      + + +  ++   + E+ ++++EEEE+EE+EE+EE
Sbjct: 11357 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 11178

Query:   198 EEEDEEDEDEEEDDDDE 214
             EEE+EE+E+EEE++++E
Sbjct: 11177 EEEEEEEEEEEEEEEEE 11127

 Score = 137 (48.2 bits), Expect = 6.6e-06, P = 6.6e-06
 Identities = 24/77 (31%), Positives = 56/77 (72%), Frame = -2

Query:   138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197
             ++++  E++  + +E+ E++      + + +  ++   + E+ ++++EEEE+EE+EE+EE
Sbjct: 11354 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 11175

Query:   198 EEEDEEDEDEEEDDDDE 214
             EEE+EE+E+EEE++++E
Sbjct: 11174 EEEEEEEEEEEEEEEEE 11124

 Score = 137 (48.2 bits), Expect = 6.6e-06, P = 6.6e-06
 Identities = 24/77 (31%), Positives = 56/77 (72%), Frame = -2

Query:   138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197
             ++++  E++  + +E+ E++      + + +  ++   + E+ ++++EEEE+EE+EE+EE
Sbjct: 11351 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 11172

Query:   198 EEEDEEDEDEEEDDDDE 214
             EEE+EE+E+EEE++++E
Sbjct: 11171 EEEEEEEEEEEEEEEEE 11121

 Score = 137 (48.2 bits), Expect = 6.6e-06, P = 6.6e-06
 Identities = 24/77 (31%), Positives = 56/77 (72%), Frame = -2

Query:   138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197
             ++++  E++  + +E+ E++      + + +  ++   + E+ ++++EEEE+EE+EE+EE
Sbjct: 11348 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 11169

Query:   198 EEEDEEDEDEEEDDDDE 214
             EEE+EE+E+EEE++++E
Sbjct: 11168 EEEEEEEEEEEEEEEEE 11118

 Score = 137 (48.2 bits), Expect = 6.6e-06, P = 6.6e-06
 Identities = 24/77 (31%), Positives = 56/77 (72%), Frame = -2

Query:   138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197
             ++++  E++  + +E+ E++      + + +  ++   + E+ ++++EEEE+EE+EE+EE
Sbjct: 11345 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 11166

Query:   198 EEEDEEDEDEEEDDDDE 214
             EEE+EE+E+EEE++++E
Sbjct: 11165 EEEEEEEEEEEEEEEEE 11115

 Score = 137 (48.2 bits), Expect = 6.6e-06, P = 6.6e-06
 Identities = 24/77 (31%), Positives = 56/77 (72%), Frame = -2

Query:   138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197
             ++++  E++  + +E+ E++      + + +  ++   + E+ ++++EEEE+EE+EE+EE
Sbjct: 11342 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 11163

Query:   198 EEEDEEDEDEEEDDDDE 214
             EEE+EE+E+EEE++++E
Sbjct: 11162 EEEEEEEEEEEEEEEEE 11112

 Score = 137 (48.2 bits), Expect = 6.6e-06, P = 6.6e-06
 Identities = 24/77 (31%), Positives = 56/77 (72%), Frame = -2

Query:   138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197
             ++++  E++  + +E+ E++      + + +  ++   + E+ ++++EEEE+EE+EE+EE
Sbjct: 11339 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 11160

Query:   198 EEEDEEDEDEEEDDDDE 214
             EEE+EE+E+EEE++++E
Sbjct: 11159 EEEEEEEEEEEEEEEEE 11109

 Score = 137 (48.2 bits), Expect = 6.6e-06, P = 6.6e-06
 Identities = 24/77 (31%), Positives = 56/77 (72%), Frame = -2

Query:   138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197
             ++++  E++  + +E+ E++      + + +  ++   + E+ ++++EEEE+EE+EE+EE
Sbjct: 11336 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 11157

Query:   198 EEEDEEDEDEEEDDDDE 214
             EEE+EE+E+EEE++++E
Sbjct: 11156 EEEEEEEEEEEEEEEEE 11106

 Score = 137 (48.2 bits), Expect = 6.6e-06, P = 6.6e-06
 Identities = 24/77 (31%), Positives = 56/77 (72%), Frame = -2

Query:   138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197
             ++++  E++  + +E+ E++      + + +  ++   + E+ ++++EEEE+EE+EE+EE
Sbjct: 11333 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 11154

Query:   198 EEEDEEDEDEEEDDDDE 214
             EEE+EE+E+EEE++++E
Sbjct: 11153 EEEEEEEEEEEEEEEEE 11103

 Score = 137 (48.2 bits), Expect = 6.6e-06, P = 6.6e-06
 Identities = 24/77 (31%), Positives = 56/77 (72%), Frame = -2

Query:   138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197
             ++++  E++  + +E+ E++      + + +  ++   + E+ ++++EEEE+EE+EE+EE
Sbjct: 11330 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 11151

Query:   198 EEEDEEDEDEEEDDDDE 214
             EEE+EE+E+EEE++++E
Sbjct: 11150 EEEEEEEEEEEEEEEEE 11100

 Score = 137 (48.2 bits), Expect = 6.6e-06, P = 6.6e-06
 Identities = 24/77 (31%), Positives = 56/77 (72%), Frame = -2

Query:   138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197
             ++++  E++  + +E+ E++      + + +  ++   + E+ ++++EEEE+EE+EE+EE
Sbjct: 11327 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 11148

Query:   198 EEEDEEDEDEEEDDDDE 214
             EEE+EE+E+EEE++++E
Sbjct: 11147 EEEEEEEEEEEEEEEEE 11097

 Score = 137 (48.2 bits), Expect = 6.6e-06, P = 6.6e-06
 Identities = 24/77 (31%), Positives = 56/77 (72%), Frame = -2

Query:   138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197
             ++++  E++  + +E+ E++      + + +  ++   + E+ ++++EEEE+EE+EE+EE
Sbjct: 11324 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 11145

Query:   198 EEEDEEDEDEEEDDDDE 214
             EEE+EE+E+EEE++++E
Sbjct: 11144 EEEEEEEEEEEEEEEEE 11094

 Score = 137 (48.2 bits), Expect = 6.6e-06, P = 6.6e-06
 Identities = 24/77 (31%), Positives = 56/77 (72%), Frame = -2

Query:   138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197
             ++++  E++  + +E+ E++      + + +  ++   + E+ ++++EEEE+EE+EE+EE
Sbjct: 11321 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 11142

Query:   198 EEEDEEDEDEEEDDDDE 214
             EEE+EE+E+EEE++++E
Sbjct: 11141 EEEEEEEEEEEEEEEEE 11091

 Score = 137 (48.2 bits), Expect = 6.6e-06, P = 6.6e-06
 Identities = 24/77 (31%), Positives = 56/77 (72%), Frame = -2

Query:   138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197
             ++++  E++  + +E+ E++      + + +  ++   + E+ ++++EEEE+EE+EE+EE
Sbjct: 11318 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 11139

Query:   198 EEEDEEDEDEEEDDDDE 214
             EEE+EE+E+EEE++++E
Sbjct: 11138 EEEEEEEEEEEEEEEEE 11088

 Score = 137 (48.2 bits), Expect = 6.6e-06, P = 6.6e-06
 Identities = 24/77 (31%), Positives = 56/77 (72%), Frame = -2

Query:   138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197
             ++++  E++  + +E+ E++      + + +  ++   + E+ ++++EEEE+EE+EE+EE
Sbjct: 11315 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 11136

Query:   198 EEEDEEDEDEEEDDDDE 214
             EEE+EE+E+EEE++++E
Sbjct: 11135 EEEEEEEEEEEEEEEEE 11085

 Score = 136 (47.9 bits), Expect = 8.7e-06, P = 8.7e-06
 Identities = 25/77 (32%), Positives = 56/77 (72%), Frame = -2

Query:   138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197
             ++++  E+K  + +E+ E++      + + +  ++   + E+ ++++EEEE+EE+EE+EE
Sbjct: 11444 EEEEEQEEKEEEEEEEEEEE-EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 11268

Query:   198 EEEDEEDEDEEEDDDDE 214
             EEE+EE+E+EEE++++E
Sbjct: 11267 EEEEEEEEEEEEEEEEE 11217

 Score = 135 (47.5 bits), Expect = 1.2e-05, P = 1.2e-05
 Identities = 25/77 (32%), Positives = 56/77 (72%), Frame = -2

Query:   138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197
             ++++  E++  + +E+ EK+      + + +  ++   + E+ ++++EEEE+EE+EE+EE
Sbjct: 11474 EEEEEEEEEEEEEEEQEEKE-EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 11298

Query:   198 EEEDEEDEDEEEDDDDE 214
             EEE+EE+E+EEE++++E
Sbjct: 11297 EEEEEEEEEEEEEEEEE 11247

 Score = 135 (47.5 bits), Expect = 1.2e-05, P = 1.2e-05
 Identities = 24/77 (31%), Positives = 55/77 (71%), Frame = -2

Query:   138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197
             + ++  E++  + +E+ E++      + + +  ++   + E+ ++++EEEE+EE+EE+EE
Sbjct: 11432 EQEEKEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 11253

Query:   198 EEEDEEDEDEEEDDDDE 214
             EEE+EE+E+EEE++++E
Sbjct: 11252 EEEEEEEEEEEEEEEEE 11202

 Score = 134 (47.2 bits), Expect = 1.6e-05, P = 1.6e-05
 Identities = 25/77 (32%), Positives = 56/77 (72%), Frame = -2

Query:   138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197
             ++++  E++  + +E+ EK+      + + +  ++   + E+ ++++EEEE+EE+EE+EE
Sbjct: 11474 EEEEEEEEEEEEEEEQEEKEEEEEEEEEEEEEEEEE--EEEEEEEEEEEEEEEEEEEEEE 11301

Query:   198 EEEDEEDEDEEEDDDDE 214
             EEE+EE+E+EEE++++E
Sbjct: 11300 EEEEEEEEEEEEEEEEE 11250

 Score = 134 (47.2 bits), Expect = 1.6e-05, P = 1.6e-05
 Identities = 24/77 (31%), Positives = 55/77 (71%), Frame = -2

Query:   138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197
             + ++  E++  + +E+ E++      + + +  ++   + E+ ++++EEEE+EE+EE+EE
Sbjct: 11423 EKEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 11244

Query:   198 EEEDEEDEDEEEDDDDE 214
             EEE+EE+E+EEE++++E
Sbjct: 11243 EEEEEEEEEEEEEEEEE 11193

 Score = 134 (47.2 bits), Expect = 1.6e-05, P = 1.6e-05
 Identities = 23/77 (29%), Positives = 56/77 (72%), Frame = -2

Query:   138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197
             ++++  E++  + +E+ E++      + + +  ++   + E+ ++++EEEE+EE+EE+EE
Sbjct: 11312 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 11133

Query:   198 EEEDEEDEDEEEDDDDE 214
             EEE+EE+E+EEE+++++
Sbjct: 11132 EEEEEEEEEEEEEEEED 11082

 Score = 118 (41.5 bits), Expect = 0.0013, P = 0.0013
 Identities = 20/33 (60%), Positives = 31/33 (93%), Frame = -2

Query:   182 KKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             +++EEEE+EE+EE+EEEEE EE E+EEE++++E
Sbjct: 11486 EEEEEEEEEEEEEEEEEEEQEEKEEEEEEEEEE 11388


>M57718;M33937 Rat cytochrome P-450 IV A1 (CYP4A1) gene, complete cds.
            Length = 16,299

  Minus Strand HSPs:

 Score = 142 (50.0 bits), Expect = 1.5e-06, P = 1.5e-06
 Identities = 28/60 (46%), Positives = 45/60 (75%), Frame = -3

Query:   154 YEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDD 213
             Y K + AY    K +  ++G  K ++ KKKK +E+DEE+EE+EEEEE+EE+E+EEE++++
Sbjct:  3985 YVKLVDAYTE*VKREIEERGDYK-QRRKKKKGDEDDEEEEEEEEEEEEEEEEEEEEEEEE 3809

 Score = 115 (40.5 bits), Expect = 0.0030, P = 0.0030
 Identities = 20/30 (66%), Positives = 29/30 (96%), Frame = -1

Query:   185 EEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             EEEE+EE+EE+EEEEE+EE+E+EEE+++ E
Sbjct:  7338 EEEEEEEEEEEEEEEEEEEEEEEEEEEEVE 7249

 Score = 111 (39.1 bits), Expect = 0.0086, P = 0.0085
 Identities = 19/28 (67%), Positives = 28/28 (100%), Frame = -1

Query:   183 KKEEEEDEEDEEDEEEEEDEEDEDEEED 210
             ++EEEE+EE+EE+EEEEE+EE+E+EEE+
Sbjct:  7338 EEEEEEEEEEEEEEEEEEEEEEEEEEEE 7255

 Score = 110 (38.7 bits), Expect = 0.011, P = 0.011
 Identities = 19/28 (67%), Positives = 28/28 (100%), Frame = -1

Query:   182 KKKEEEEDEEDEEDEEEEEDEEDEDEEE 209
             +++EEEE+EE+EE+EEEEE+EE+E+EEE
Sbjct:  7338 EEEEEEEEEEEEEEEEEEEEEEEEEEEE 7255

 Score = 110 (38.7 bits), Expect = 0.011, P = 0.011
 Identities = 19/29 (65%), Positives = 29/29 (100%), Frame = -1

Query:   180 SKKKKEEEEDEEDEEDEEEEEDEEDEDEE 208
             S++++EEEE+EE+EE+EEEEE+EE+E+EE
Sbjct:  7341 SEEEEEEEEEEEEEEEEEEEEEEEEEEEE 7255

 Score = 110 (38.7 bits), Expect = 0.011, P = 0.011
 Identities = 20/42 (47%), Positives = 34/42 (80%), Frame = -1

Query:   167 PDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEE 208
             P+     +V +E+ ++++EEEE+EE+EE+EEEEE+EE+E E+
Sbjct:  7371 PNGLDIALVISEEEEEEEEEEEEEEEEEEEEEEEEEEEEVEQ 7246

 Score = 106 (37.3 bits), Expect = 0.032, P = 0.032
 Identities = 20/31 (64%), Positives = 30/31 (96%), Frame = -1

Query:   180 SKKKKEEEEDEEDEEDEEEEEDEEDEDEE-E 209
             S++++EEEE+EE+EE+EEEEE+EE+E+EE E
Sbjct:  7341 SEEEEEEEEEEEEEEEEEEEEEEEEEEEEVE 7249


>X96770 S.cerevisiae chromosome XVI, left arm DNA
        Length = 55,786

  Minus Strand HSPs:

 Score = 142 (50.0 bits), Expect = 1.5e-06, P = 1.5e-06
 Identities = 31/76 (40%), Positives = 50/76 (65%), Frame = -1

Query:   143 YEKKAAKLKEKYEKDIA-----AYRAKGKPDAAKKGV-VKAEKSKKKKEEEEDEEDEEDE 196
             Y  K+A+      +D+       Y A G       GV V+A++  +++E+E+DE+DEE+E
Sbjct: 25654 YMNKSAETNSTIYEDLVDSLLTEYEADGSSSQIFDGVTVRADE--EEEEDEDDEDDEEEE 25481

Query:   197 EEEEDEEDEDEEEDDDDE 214
             EE +DEEDE++EEDD+D+
Sbjct: 25480 EENDDEEDEEDEEDDEDD 25427

 Score = 137 (48.2 bits), Expect = 6.8e-06, P = 6.8e-06
 Identities = 29/79 (36%), Positives = 51/79 (64%), Frame = -1

Query:   143 YEKKAAKLKEKYEKDIA-----AYRAKGKPDAAKKGV-VKAEKSKKKKEEEEDEEDEEDE 196
             Y  K+A+      +D+       Y A G       GV V+A++ +++ E++ED+E+EE+E
Sbjct: 25654 YMNKSAETNSTIYEDLVDSLLTEYEADGSSSQIFDGVTVRADEEEEEDEDDEDDEEEEEE 25475

Query:   197 -EEEEDEEDEDEEEDDDDE 214
              ++EEDEEDE+++EDD++E
Sbjct: 25474 NDDEEDEEDEEDDEDDEEE 25418

 Score = 127 (44.7 bits), Expect = 0.00011, P = 0.00011
 Identities = 30/83 (36%), Positives = 47/83 (56%), Frame = -1

Query:   133 NNTAADDKQPYEKKAAKLKEKYEKDIAAYRA-KGKPDAAKKGVVKAEKSKKKKEEEEDEE 191
             N +A  +   YE     L  +YE D ++ +   G    A +   + E  +  +EEEE+ +
Sbjct: 25648 NKSAETNSTIYEDLVDSLLTEYEADGSSSQIFDGVTVRADEEEEEDEDDEDDEEEEEEND 25469

Query:   192 DEEDEEEEEDEEDEDEEEDDDDE 214
             DEEDEE+EED+ED++EEE+   E
Sbjct: 25468 DEEDEEDEEDDEDDEEEEEKRKE 25400

 Score = 116 (40.8 bits), Expect = 0.0023, P = 0.0023
 Identities = 29/85 (34%), Positives = 48/85 (56%), Frame = -1

Query:   133 NNTAADDKQPYEKKAAKLKEKYEKDIAAYRA-KGKPDAAKKGVVKAEKSKKKKEEEEDEE 191
             N +A  +   YE     L  +YE D ++ +   G    A +   + E  +  +EEEE+ +
Sbjct: 25648 NKSAETNSTIYEDLVDSLLTEYEADGSSSQIFDGVTVRADEEEEEDEDDEDDEEEEEEND 25469

Query:   192 DEEDEEEEEDEEDEDEEED---DDD 213
             DEEDEE+EED+ED++EEE+   + +
Sbjct: 25468 DEEDEEDEEDDEDDEEEEEKRKEGE 25394

 Score = 93 (32.7 bits), Expect = 0.98, P = 0.62
 Identities = 27/85 (31%), Positives = 46/85 (54%), Frame = -1

Query:   133 NNTAADDKQPYEKKAAKLKEKYEKDIAAYRA-KG---KPDAAKKGVVKAEKSKKKKEEEE 188
             N +A  +   YE     L  +YE D ++ +   G   + D  ++     E  ++++EE +
Sbjct: 25648 NKSAETNSTIYEDLVDSLLTEYEADGSSSQIFDGVTVRADEEEEEDEDDEDDEEEEEEND 25469

Query:   189 DEEDEEDEEEEEDEEDEDE------ 207
             DEEDEEDEE++ED+E+E+E      
Sbjct: 25468 DEEDEEDEEDDEDDEEEEEKRKEGE 25394

 Score = 40 (14.1 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
 Identities = 7/24 (29%), Positives = 11/24 (45%), Frame = -1

Query:     8 PRGKMSSYAFFVQTCREEHKKKHP 31
             P  +    A+ +  C   H +KHP
Sbjct: 28360 PLHRRKEIAWQIVWCSRPHHRKHP 28289


>AF005370 Alcelaphine herpesvirus 1 L-DNA, complete sequence.
          Length = 130,608

  Minus Strand HSPs:

 Score = 142 (50.0 bits), Expect = 1.5e-06, P = 1.5e-06
 Identities = 25/45 (55%), Positives = 37/45 (82%), Frame = -2

Query:    170 AKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
              A +GV  +  S K  ++EE+EE+EE+EEEEE+E+DE+EEEDD++E
Sbjct: 117863 ALEGVCGSHSSSKDSDDEEEEEEEEEEEEEEEEDDEEEEEDDEEE 117729

 Score = 134 (47.2 bits), Expect = 1.6e-05, P = 1.6e-05
 Identities = 21/37 (56%), Positives = 36/37 (97%), Frame = -2

Query:    178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
              E+ ++++EEEE+E+DEE+EE++E+EE++DEEE++DDE
Sbjct: 117803 EEEEEEEEEEEEEDDEEEEEDDEEEEEDDEEEEEDDE 117693

 Score = 134 (47.2 bits), Expect = 1.6e-05, P = 1.6e-05
 Identities = 21/37 (56%), Positives = 36/37 (97%), Frame = -2

Query:    178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
              E+ ++++EEEED+E+EE+++EEE+E+DE+EEEDD++E
Sbjct: 117797 EEEEEEEEEEEDDEEEEEDDEEEEEDDEEEEEDDEEE 117687

 Score = 133 (46.8 bits), Expect = 2.1e-05, P = 2.1e-05
 Identities = 25/52 (48%), Positives = 41/52 (78%), Frame = -2

Query:    165 GKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEE--EEDEEDEDEEEDDDDE 214
              G   ++K    + E+ ++++EEEE+EED+E+EEE  EE+EED++EEE+DD+E
Sbjct: 117845 GSHSSSKDSDDEEEEEEEEEEEEEEEEDDEEEEEDDEEEEEDDEEEEEDDEE 117690

 Score = 130 (45.8 bits), Expect = 5.0e-05, P = 5.0e-05
 Identities = 21/37 (56%), Positives = 34/37 (91%), Frame = -2

Query:    178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
              E+ +  +EEEED+E+EE+++EEE+E+DE+EEEDD++E
Sbjct: 117776 EEEEDDEEEEEDDEEEEEDDEEEEEDDEEEEEDDEEE 117666

 Score = 130 (45.8 bits), Expect = 5.0e-05, P = 5.0e-05
 Identities = 21/37 (56%), Positives = 34/37 (91%), Frame = -2

Query:    178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
              E+ +  +EEEED+E+EE+++EEE+E+DE+EEEDD++E
Sbjct: 117755 EEEEDDEEEEEDDEEEEEDDEEEEEDDEEEEEDDEEE 117645

 Score = 129 (45.4 bits), Expect = 6.7e-05, P = 6.7e-05
 Identities = 20/37 (54%), Positives = 35/37 (94%), Frame = -2

Query:    178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
              E+ +++ +EEE+E+DEE+EE++E+EE++DEEE++DDE
Sbjct: 117782 EEEEEEDDEEEEEDDEEEEEDDEEEEEDDEEEEEDDE 117672

 Score = 127 (44.7 bits), Expect = 0.00012, P = 0.00012
 Identities = 23/54 (42%), Positives = 42/54 (77%), Frame = -2

Query:    163 AKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEE--EEDEEDEDEEEDDDDE 214
              +K   D  ++   + E+ ++++++EE+EED+E+EEE  EE+EED++EEE+DD+E
Sbjct: 117830 SKDSDDEEEEEEEEEEEEEEEEDDEEEEEDDEEEEEDDEEEEEDDEEEEEDDEE 117669

 Score = 126 (44.4 bits), Expect = 0.00015, P = 0.00015
 Identities = 19/37 (51%), Positives = 35/37 (94%), Frame = -2

Query:    178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
              ++ +++ +EEE+E+DEE+EE++E+EE++DEEE++DDE
Sbjct: 117761 DEEEEEDDEEEEEDDEEEEEDDEEEEEDDEEEEEDDE 117651

 Score = 126 (44.4 bits), Expect = 0.00015, P = 0.00015
 Identities = 23/66 (34%), Positives = 46/66 (69%), Frame = -3

Query:    149 KLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEE 208
              K KEK EKD+    AK   +  ++   K EK +K+++EE++E++ ++ +EE++E++E EE
Sbjct: 117562 KAKEKKEKDVKKMEAKEAKEEKEEKEEKEEKEEKEEKEEKEEKEAKEAKEEKEEKEEKEE 117383

Query:    209 EDDDDE 214
              +++ +E
Sbjct: 117382 KEEKEE 117365

 Score = 124 (43.7 bits), Expect = 0.00026, P = 0.00026
 Identities = 32/76 (42%), Positives = 50/76 (65%), Frame = -3

Query:    139 DKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEE-EEDEEDEEDEE 197
              D +  E K AK +EK EK+    + + K +  +K   +A+++K++KEE EE EE EE EE
Sbjct: 117538 DVKKMEAKEAK-EEKEEKEEKEEKEE-KEEKEEKEEKEAKEAKEEKEEKEEKEEKEEKEE 117365

Query:    198 EEEDEEDEDEEEDDDDE 214
              +EE EE E++EE ++ E
Sbjct: 117364 KEEKEEKEEKEEKEEKE 117314

 Score = 123 (43.3 bits), Expect = 0.00035, P = 0.00035
 Identities = 19/37 (51%), Positives = 34/37 (91%), Frame = -2

Query:    178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
              E+ ++  EEEE++++EE+E++EE+EED++EEE+DD+E
Sbjct: 117758 EEEEEDDEEEEEDDEEEEEDDEEEEEDDEEEEEDDEE 117648

 Score = 123 (43.3 bits), Expect = 0.00035, P = 0.00035
 Identities = 32/89 (35%), Positives = 52/89 (58%), Frame = -3

Query:    126 KKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKE 185
              KK  ++    A + K+  E+K  K +EK EK+    + + +   AK+   + E+ ++K+E
Sbjct: 117550 KKEKDVKKMEAKEAKEEKEEKEEK-EEKEEKEEKEEKEEKEAKEAKEEKEEKEEKEEKEE 117374

Query:    186 EEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
              +EE EE EE EE+EE EE E +EE +  E
Sbjct: 117373 KEEKEEKEEKEEKEEKEEKEAKEEKEAKE 117287

 Score = 121 (42.6 bits), Expect = 0.00060, P = 0.00060
 Identities = 28/89 (31%), Positives = 57/89 (64%), Frame = -3

Query:    126 KKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKE 185
              K + +M    A ++K+  E+K  K +EK EK+      K   +A ++   K EK +K+++
Sbjct: 117541 KDVKKMEAKEAKEEKEEKEEKEEK-EEKEEKE--EKEEKEAKEAKEEKEEKEEKEEKEEK 117371

Query:    186 EEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
              EE++E++E++E+EE++E++  EE++  +E
Sbjct: 117370 EEKEEKEEKEEKEEKEEKEAKEEKEAKEE 117284

 Score = 117 (41.2 bits), Expect = 0.0018, P = 0.0018
 Identities = 20/39 (51%), Positives = 35/39 (89%), Frame = -2

Query:    178 EKSKKKKEEEEDEEDEEDEEEEED--EEDEDEEEDDDDE 214
              E+  +++EE+++EE+E+DEEEEED  EE+ED+EE++++E
Sbjct: 117749 EEDDEEEEEDDEEEEEDDEEEEEDDEEEEEDDEEEEEEE 117633

 Score = 116 (40.8 bits), Expect = 0.0023, P = 0.0023
 Identities = 25/77 (32%), Positives = 53/77 (68%), Frame = -3

Query:    138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197
              ++K+  E+K  K +EK EK+  A  AK + +  ++   K EK +K+++EE++E++E++E+
Sbjct: 117487 EEKEEKEEKEEK-EEKEEKE--AKEAKEEKEEKEEKEEKEEKEEKEEKEEKEEKEEKEEK 117317

Query:    198 EEEDEEDEDEEEDDDDE 214
              E ++E++  EE++  +E
Sbjct: 117316 EAKEEKEAKEEKEAKEE 117266

 Score = 103 (36.3 bits), Expect = 0.073, P = 0.070
 Identities = 24/60 (40%), Positives = 43/60 (71%), Frame = -3

Query:    155 EK-DIAAYR----AKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEE 209
              EK D+AA      AK K    K+  VK  ++K+ KEE+E++E++E++EE+E++E+++E+E
Sbjct: 117610 EKMDVAAVMLFV*AKKKAKEKKEKDVKKMEAKEAKEEKEEKEEKEEKEEKEEKEEKEEKE 117431

 Score = 103 (36.3 bits), Expect = 0.073, P = 0.070
 Identities = 24/72 (33%), Positives = 48/72 (66%), Frame = -3

Query:    138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197
              ++K+  E+K  K +EK EK+    + + K +   K   +A++ K+ KEE+E +E++E +E
Sbjct: 117388 EEKEEKEEKEEK-EEKEEKEEKEEK-EAKEEKEAKEEKEAKEEKEAKEEKEAKEEKEAKE 117215

Query:    198 EEEDEEDEDEEE 209
              E+E +E+++E+E
Sbjct: 117214 EKEAKEEKEEKE 117179

 Score = 102 (35.9 bits), Expect = 0.094, P = 0.090
 Identities = 23/77 (29%), Positives = 52/77 (67%), Frame = -3

Query:    138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197
              ++K+  E+K  K +EK EK+    + + +   AK+   +A++ K+ KEE+E +E++E +E
Sbjct: 117406 EEKEEKEEKEEK-EEKEEKEEKEEKEEKEEKEAKEEK-EAKEEKEAKEEKEAKEEKEAKE 117233

Query:    198 EEEDEEDEDEEEDDDDE 214
              E+E +E+++ +E+ +++
Sbjct: 117232 EKEAKEEKEAKEEKEEK 117182

 Score = 98 (34.5 bits), Expect = 0.27, P = 0.24
 Identities = 23/75 (30%), Positives = 49/75 (65%), Frame = -3

Query:    138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197
              ++K+  E K AK +EK EK+      + K +  +K   + ++ K++KEE+E +E++E +E
Sbjct: 117451 EEKEEKEAKEAK-EEKEEKE----EKEEKEEKEEKEEKEEKEEKEEKEEKEAKEEKEAKE 117287

Query:    198 EEEDEEDEDEEEDDD 212
              E+E +E+++ +E+ +
Sbjct: 117286 EKEAKEEKEAKEEKE 117242

 Score = 98 (34.5 bits), Expect = 0.27, P = 0.24
 Identities = 25/76 (32%), Positives = 50/76 (65%), Frame = -3

Query:    138 DDKQPYEKKAAKLKEKYEKDIAAYRA-KGKPDAAKKGVVKAEKSKKK-KEEEEDEEDEED 195
              ++K+  E K AK +EK EK+    +  K + +  ++   K EK +K+ KEE+E +E++E 
Sbjct: 117451 EEKEEKEAKEAK-EEKEEKEEKEEKEEKEEKEEKEEKEEKEEKEEKEAKEEKEAKEEKEA 117275

Query:    196 EEEEEDEEDEDEEEDDD 212
              +EE+E +E+++ +E+ +
Sbjct: 117274 KEEKEAKEEKEAKEEKE 117224

 Score = 91 (32.0 bits), Expect = 1.7, P = 0.81
 Identities = 22/46 (47%), Positives = 29/46 (63%), Frame = -3

Query:    169 AAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
              A KK   K EK  KK E +E +E  E EE+EE EE E++EE ++ E
Sbjct: 117571 AKKKAKEKKEKDVKKMEAKEAKE--EKEEKEEKEEKEEKEEKEEKE 117440

 Score = 47 (16.5 bits), Expect = 5.7e-06, Sum P(2) = 5.7e-06
 Identities = 8/20 (40%), Positives = 15/20 (75%), Frame = -2

Query:    133 NNTAADDKQPYEKKAAKLKE 152
              ++TA+DD+  YE+  A ++E
Sbjct: 125051 SHTASDDESSYERALAAVRE 124992


>L34363 Human X-linked nuclear protein (XNP) gene, complete cds.
        Length = 5173

  Plus Strand HSPs:

 Score = 141 (49.6 bits), Expect = 1.8e-06, P = 1.8e-06
 Identities = 30/78 (38%), Positives = 52/78 (66%), Frame = +3

Query:   137 ADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDE 196
             ++D+Q    ++AK K + E++   Y+ K K    K   V+ + S + K   E+EE+E++E
Sbjct:  1659 SEDEQRPRTRSAK-KAELEENQRIYKQKKKRRRIK---VQEDSSSENKSNSEEEEEEKEE 1826

Query:   197 EEEEDEEDEDEEEDDDDE 214
             EEEE+EE+E+EEED++D+
Sbjct:  1827 EEEEEEEEEEEEEDENDD 1880

 Score = 136 (47.9 bits), Expect = 8.1e-06, P = 8.1e-06
 Identities = 31/78 (39%), Positives = 50/78 (64%), Frame = +3

Query:   137 ADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDE 196
             ++D+Q    ++AK K + E++   Y+ K K    K     + ++K   EEEE EE EE+E
Sbjct:  1659 SEDEQRPRTRSAK-KAELEENQRIYKQKKKRRRIKVQEDSSSENKSNSEEEE-EEKEEEE 1832

Query:   197 EEEEDEEDEDEEEDDDDE 214
             EEEE+EE+E+E+E+DD +
Sbjct:  1833 EEEEEEEEEEEDENDDSK 1886


>M18837 Mouse MHC class I Q4 beta-2-microglobulin (Qb-1) gene, complete
        Length = 5221

  Minus Strand HSPs:

 Score = 141 (49.6 bits), Expect = 1.8e-06, P = 1.8e-06
 Identities = 29/83 (34%), Positives = 55/83 (66%), Frame = -1

Query:   132 WNNTAADDKQPYEKKA-AKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDE 190
             W+ +   D Q  ++   +K +E+ E++    R + +         + E+ ++K+EEEE+E
Sbjct:  2521 WSTSEFQDSQGIQRNPISKTEEERERERERERERER---------EREREREKEEEEEEE 2369

Query:   191 EDEEDEEEEEDEEDEDEEEDDDDE 214
             E+EE+EEEEE+EE+E+EEE++++E
Sbjct:  2368 EEEEEEEEEEEEEEEEEEEEEEEE 2297

 Score = 127 (44.7 bits), Expect = 0.00010, P = 0.00010
 Identities = 26/77 (33%), Positives = 51/77 (66%), Frame = -1

Query:   132 WNNTAADDKQPYEKKA-AKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDE 190
             W+ +   D Q  ++   +K +E+ E++    R + +    ++   + E+ ++++EEEE+E
Sbjct:  2521 WSTSEFQDSQGIQRNPISKTEEERERERERERERERERERER---EKEEEEEEEEEEEEE 2351

Query:   191 EDEEDEEEEEDEEDEDEE 208
             E+EE+EEEEE+EE+E+EE
Sbjct:  2350 EEEEEEEEEEEEEEEEEE 2297

 Score = 90 (31.7 bits), Expect = 2.0, P = 0.87
 Identities = 42/167 (25%), Positives = 77/167 (46%), Frame = -2

Query:    28 KKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARYEREMKTYIPPKGETKKK 87
             K++PD +     F   C + + T   K + K +D + ADK   ++  +  I P  + KK 
Sbjct:  2778 KENPDLTC--LNFPGTCGD*Y-T**YKGREK-QDHSSADKR--QKMTRNKITPSKKKKKS 2617

Query:    88 FKDPNAPKRPPSAFFLFCSEYRPK-IKGE-HPGLSIGDVAKKLGEMWNNTAADDKQPYEK 145
              ++     R P AF       R     G  HPGL    V+ +    +  T +   +  E+
Sbjct:  2616 KENKKGWARWPHAFNPSTGRQRQADF*GRGHPGLQ---VSSRTARAYRETLSQKLKKRER 2446

Query:   146 KAAKLKEKY-EKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEE 194
             +  + +E+  E++    R K K    KK   K +K KKKK++++ ++ ++
Sbjct:  2445 ERERERERERERERERERRKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK 2296


>X63507;S42523;S42569 M.musculus HOX-3.5 gene
            Length = 6343

  Minus Strand HSPs:

 Score = 141 (49.6 bits), Expect = 1.9e-06, P = 1.9e-06
 Identities = 30/54 (55%), Positives = 43/54 (79%), Frame = -1

Query:   161 YRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             YR KGK    K+G    EK K+ +EEEE+EE+EE+EEEEE+EE+E+EEE++++E
Sbjct:  2494 YR-KGK----KRGQRWWEKKKEGEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 2348

 Score = 133 (46.8 bits), Expect = 2.0e-05, P = 2.0e-05
 Identities = 24/46 (52%), Positives = 39/46 (84%), Frame = -1

Query:   171 KKGVVKAEK--SKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             +KG  + ++   KKK+ EEE+EE+EE+EEEEE+EE+E+EEE++++E
Sbjct:  2491 RKGKKRGQRWWEKKKEGEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 2354

 Score = 132 (46.5 bits), Expect = 2.7e-05, P = 2.7e-05
 Identities = 24/45 (53%), Positives = 39/45 (86%), Frame = -1

Query:   171 KKGVVKAEKS-KKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             +KG  + ++  +KKKE EE+EE+EE+EEEEE+EE+E+EEE++++E
Sbjct:  2491 RKGKKRGQRWWEKKKEGEEEEEEEEEEEEEEEEEEEEEEEEEEEE 2357

 Score = 108 (38.0 bits), Expect = 0.018, P = 0.018
 Identities = 24/57 (42%), Positives = 40/57 (70%), Frame = -1

Query:   151 KEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDE 207
             ++KY K     R +   +  K+G    E+ ++++EEEE+EE+EE+EEEEE+EE+E+E
Sbjct:  2503 RKKYRK--GKKRGQRWWEKKKEG---EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 2348


>U88309 Caenorhabditis elegans cosmid T23B3.
        Length = 32,228

  Minus Strand HSPs:

 Score = 141 (49.6 bits), Expect = 2.0e-06, P = 2.0e-06
 Identities = 35/79 (44%), Positives = 52/79 (65%), Frame = -2

Query:   137 ADDKQPYEKKAAKLKEKYE--KDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEE 194
             AD+K+  EKK  K  EK +  KD      K K   +KK   K++KSKK K E++DEE +E
Sbjct: 18427 ADEKKDEEKKDDKKDEKKDEKKDEKKDEKKEKSKKSKKSS-KSKKSKKSKREKKDEEKKE 18251

Query:   195 DEEEEEDEED---EDEEEDD 211
             D+++E+D++D   EDE++DD
Sbjct: 18250 DDKKEDDKKDDKKEDEKKDD 18191

 Score = 124 (43.7 bits), Expect = 0.00026, P = 0.00026
 Identities = 29/78 (37%), Positives = 49/78 (62%), Frame = -2

Query:   137 ADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDE 196
             AD+K+  EKK  K  EK  KD    +   K D  K+   K++KS K K+ ++ + +++DE
Sbjct: 18427 ADEKKDEEKKDDKKDEK--KD---EKKDEKKDEKKEKSKKSKKSSKSKKSKKSKREKKDE 18263

Query:   197 EEEEDEEDEDEEEDDDDE 214
             E++ED++ ED+++DD  E
Sbjct: 18262 EKKEDDKKEDDKKDDKKE 18209

 Score = 118 (41.5 bits), Expect = 0.0013, P = 0.0013
 Identities = 27/89 (30%), Positives = 52/89 (58%), Frame = -2

Query:   127 KLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKG-KPDAAKKGVVKAEKSKKKKE 185
             K  E  +    D+K+  ++K  + K+  +KD      K  K D  K+   K++KS K K+
Sbjct: 18475 KKDEKKDEDKKDEKKDADEKKDEEKKDDKKDEKKDEKKDEKKDEKKEKSKKSKKSSKSKK 18296

Query:   186 EEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
              ++ + +++DEE++ED++ ED+++DD  E
Sbjct: 18295 SKKSKREKKDEEKKEDDKKEDDKKDDKKE 18209

 Score = 114 (40.1 bits), Expect = 0.0039, P = 0.0039
 Identities = 39/131 (29%), Positives = 67/131 (51%), Frame = -2

Query:    79 PPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAAD 138
             PPK  +K     P AP  PP+A     +   P      P  + G+  KK GE  +     
Sbjct: 18700 PPKSASKMG-PPPPAPA-PPTAPEAAPAAPTPDAAAAAP--AEGE--KKDGEKKSEKKDG 18539

Query:   139 DKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEE 198
             DK+  EKK  + K+  +K+    +   K D  KK   K    KK +E+++D++DE+ +E+
Sbjct: 18538 DKKEEEKKDEEKKDGDKKEDD--KKDEKKDEDKKDEKKDADEKKDEEKKDDKKDEKKDEK 18365

Query:   199 EEDEEDEDEEE 209
             +++++DE +E+
Sbjct: 18364 KDEKKDEKKEK 18332

 Score = 105 (37.0 bits), Expect = 0.042, P = 0.042
 Identities = 24/56 (42%), Positives = 38/56 (67%), Frame = -2

Query:   159 AAYRAKG-KPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             AA  A+G K D  KK   K     KK+EE++DEE ++ +++E+D++DE ++ED  DE
Sbjct: 18601 AAAPAEGEKKDGEKKSEKK--DGDKKEEEKKDEEKKDGDKKEDDKKDEKKDEDKKDE 18437

 Score = 97 (34.1 bits), Expect = 0.35, P = 0.29
 Identities = 20/50 (40%), Positives = 35/50 (70%), Frame = -2

Query:   167 PDAAKKGVVKAEKSK-KKKEEEEDEEDEEDEEEEEDEEDEDEEEDDD-DE 214
             PDAA     + EK   +KK E++D + +E+E+++E+++D D++EDD  DE
Sbjct: 18613 PDAAAAAPAEGEKKDGEKKSEKKDGDKKEEEKKDEEKKDGDKKEDDKKDE 18464

 Score = 40 (14.1 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
 Identities = 7/20 (35%), Positives = 13/20 (65%), Frame = -3

Query:     1 GKGDPKKPRGKMSSYAFFVQ 20
             GK + ++ RGK+    +F+Q
Sbjct: 27072 GKLESEQERGKICEIKYFIQ 27013


>AF034569 Mus musculus anticoagulant protein C gene, complete cds.
          Length = 15,160

  Plus Strand HSPs:

 Score = 137 (48.2 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06
 Identities = 27/67 (40%), Positives = 46/67 (68%), Frame = +2

Query:   145 KKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEED 204
             KK  K K+K +K     + K +    ++   +  + ++K+EEEE+EE+EE+EEEEE+EE+
Sbjct:  9749 KKKKKKKKKKKKKKKKKKKKRRRRRRRRRRRRRRRRRRKEEEEEEEEEEEEEEEEEEEEE 9928

Query:   205 EDEEEDD 211
             E+EEE++
Sbjct:  9929 EEEEEEE 9949

 Score = 135 (47.5 bits), Expect = 4.0e-06, Sum P(2) = 4.0e-06
 Identities = 26/67 (38%), Positives = 46/67 (68%), Frame = +2

Query:   146 KAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDE 205
             K  K K+K +K     + K +    ++   +  + +++KEEEE+EE+EE+EEEEE+EE+E
Sbjct:  9749 KKKKKKKKKKKKKKKKKKKKRRRRRRRRRRRRRRRRRRKEEEEEEEEEEEEEEEEEEEEE 9928

Query:   206 DEEEDDD 212
             +EEE+++
Sbjct:  9929 EEEEEEE 9949

 Score = 132 (46.5 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
 Identities = 26/71 (36%), Positives = 49/71 (69%), Frame = +2

Query:   144 EKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEE 203
             +KK  K K+K +K     + K K    ++   +  + ++++ +EE+EE+EE+EEEEE+EE
Sbjct:  9749 KKKKKKKKKKKKKK----KKKKKKRRRRRRRRRRRRRRRRRRKEEEEEEEEEEEEEEEEE 9916

Query:   204 DEDEEEDDDDE 214
             +E+EEE++++E
Sbjct:  9917 EEEEEEEEEEE 9949

 Score = 91 (32.0 bits), Expect = 0.87, Sum P(2) = 0.58
 Identities = 16/27 (59%), Positives = 25/27 (92%), Frame = +1

Query:   183 KKEEEEDEEDEEDEEEEEDEEDEDEEE 209
             K EEEE+EE+EE+EEEEE+EE++ +++
Sbjct:  9742 KLEEEEEEEEEEEEEEEEEEEEKKKKK 9822

 Score = 82 (28.9 bits), Expect = 8.6, Sum P(2) = 1.0
 Identities = 14/20 (70%), Positives = 20/20 (100%), Frame = +1

Query:   191 EDEEDEEEEEDEEDEDEEED 210
             E+EE+EEEEE+EE+E+EEE+
Sbjct:  9748 EEEEEEEEEEEEEEEEEEEE 9807

 Score = 50 (17.6 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06
 Identities = 14/41 (34%), Positives = 19/41 (46%), Frame = +3

Query:    47 RWKTMSAKEKGKFEDMAKADKARYEREMKTYIPPKGETKKK 87
             RW    A    KF+D  K  KA  + + KT   P G+ K +
Sbjct:   873 RWSLRPAWST*KFQDSQKVPKAIQKNKNKT--KPGGKKKTR 989

 Score = 47 (16.5 bits), Expect = 4.1e-06, Sum P(2) = 4.1e-06
 Identities = 11/39 (28%), Positives = 20/39 (51%), Frame = +1

Query:    41 SKKCSERWKTMSAKEKGKFEDMAKADKARYEREMKTYIP 79
             SKK  ++ KT   +E+ K     +  + + ER+ K  +P
Sbjct:  6202 SKKQKQKQKTKKERERKKGRKKERKKERKKERKRKKDLP 6318

 Score = 41 (14.4 bits), Expect = 1.1, Sum P(3) = 0.68
 Identities = 11/21 (52%), Positives = 11/21 (52%), Frame = +2

Query:   166 KPDAAKKGVVKAEKSKKKKEE 186
             KP   K    K  K KKKKEE
Sbjct:  8528 KP-CLKTKQTKQNKKKKKKEE 8587


>X64743;S37462 G.gallus RSFR mRNA
            Length = 801

  Plus Strand HSPs:

 Score = 137 (48.2 bits), Expect = 2.1e-06, P = 2.1e-06
 Identities = 28/33 (84%), Positives = 31/33 (93%), Frame = +3

Query:   173 GVVKAEKSKKKKEEEEDE-EDEEDEEEEEDEED 204
             GV KAEKSKKKKEEEEDE EDEEDEE+EE+EE+
Sbjct:     9 GVAKAEKSKKKKEEEEDEDEDEEDEEDEEEEEN 107

 Score = 131 (46.1 bits), Expect = 1.3e-05, P = 1.3e-05
 Identities = 28/38 (73%), Positives = 32/38 (84%), Frame = +3

Query:   173 GVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEED 210
             GV KAEKSKKKKEEEEDE+     E+EEDEEDE+EEE+
Sbjct:     9 GVAKAEKSKKKKEEEEDED-----EDEEDEEDEEEEEN 107

 Score = 130 (45.8 bits), Expect = 1.7e-05, P = 1.7e-05
 Identities = 29/41 (70%), Positives = 34/41 (82%), Frame = +3

Query:   173 GVVKAEKSKKKKEEEEDE-EDEEDEEEEEDEEDEDE---EE 209
             GV KAEKSKKKKEEEEDE EDEEDEE+EE+EE+ +    +E
Sbjct:     9 GVAKAEKSKKKKEEEEDEDEDEEDEEDEEEEENVEAGHPQE 131


>M14483 Human prothymosin alpha mRNA, complete cds.
        Length = 490

  Plus Strand HSPs:

 Score = 123 (43.3 bits), Expect = 2.2e-06, P = 2.2e-06
 Identities = 28/65 (43%), Positives = 39/65 (60%), Frame = +1

Query:   150 LKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEE 209
             LKEK  K++      G+ DA   G    E  +++ + E DEE+EE  EEEE+EE+ D EE
Sbjct:   181 LKEK--KEVVEEAENGR-DAPANGNANEENGEQEADNEVDEEEEEGGEEEEEEEEGDGEE 351

Query:   210 DDDDE 214
             +D DE
Sbjct:   352 EDGDE 366

 Score = 93 (32.7 bits), Expect = 0.22, P = 0.20
 Identities = 31/81 (38%), Positives = 42/81 (51%), Frame = +1

Query:   150 LKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEE------ 203
             LKEK  K++      G+ DA   G    E  +++ + E DEE+EE  EEEE+EE      
Sbjct:   181 LKEK--KEVVEEAENGR-DAPANGNANEENGEQEADNEVDEEEEEGGEEEEEEEEGDGEE 351

Query:   204 ---DEDEE----------EDDDDE 214
                DEDEE          EDD+D+
Sbjct:   352 EDGDEDEEAESATGKRAAEDDEDD 423

 Score = 84 (29.6 bits), Expect = 3.1, P = 0.95
 Identities = 22/60 (36%), Positives = 36/60 (60%), Frame = +1

Query:   160 AYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDE------EEDDDD 213
             A    G+ +A  + V + E+   ++EEEE+E D E+E+ +EDEE E        E+D+DD
Sbjct:   247 ANEENGEQEADNE-VDEEEEEGGEEEEEEEEGDGEEEDGDEDEEAESATGKRAAEDDEDD 423

Query:   214 E 214
             +
Sbjct:   424 D 426


>L81783 Homo sapiens (subclone 9_d11 from P1 H26) DNA sequence, complete
        Length = 2998

  Plus Strand HSPs:

 Score = 140 (49.3 bits), Expect = 2.3e-06, P = 2.3e-06
 Identities = 23/43 (53%), Positives = 39/43 (90%), Frame = +3

Query:   172 KGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             K + K +K K+K++EEE+EE+EE+EEEEE+EE+E+EEE+++++
Sbjct:   867 KSI*KPKKKKRKRKEEEEEEEEEEEEEEEEEEEEEEEEEEEEK 995

 Score = 133 (46.8 bits), Expect = 1.8e-05, P = 1.8e-05
 Identities = 23/36 (63%), Positives = 34/36 (94%), Frame = +3

Query:   176 KAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDD 211
             K +K K+K+EEEE+EE+EE+EEEEE+EE+E+EEE++
Sbjct:   885 KKKKRKRKEEEEEEEEEEEEEEEEEEEEEEEEEEEE 992

 Score = 133 (46.8 bits), Expect = 1.8e-05, P = 1.8e-05
 Identities = 22/36 (61%), Positives = 34/36 (94%), Frame = +3

Query:   179 KSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             K KK+K +EE+EE+EE+EEEEE+EE+E+EEE++++E
Sbjct:   885 KKKKRKRKEEEEEEEEEEEEEEEEEEEEEEEEEEEE 992

 Score = 125 (44.0 bits), Expect = 0.00017, P = 0.00017
 Identities = 21/35 (60%), Positives = 33/35 (94%), Frame = +3

Query:   176 KAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEED 210
             K ++ +K++EEEE+EE+EE+EEEEE+EE+E+EEE+
Sbjct:   888 KKKRKRKEEEEEEEEEEEEEEEEEEEEEEEEEEEE 992


>U40719 Rattus norvegicus S-adenosylmethionine decarboxylase (AMDP3)
        Length = 3433

  Plus Strand HSPs:

 Score = 140 (49.3 bits), Expect = 2.4e-06, P = 2.4e-06
 Identities = 28/75 (37%), Positives = 51/75 (68%), Frame = +3

Query:   140 KQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEE 199
             K  Y+  A K K+K EK+      +G+     +G  + E+ ++++EEEE+EE+EE+EEEE
Sbjct:   522 KS*YKIIAKKKKKKEEKEKEG-GGRGRGGEGGRGEEEEEEEEEEEEEEEEEEEEEEEEEE 698

Query:   200 EDEEDEDEEEDDDDE 214
             E++E E++EE++ ++
Sbjct:   699 EEQEQEEQEEEEQEQ 743

 Score = 127 (44.7 bits), Expect = 9.8e-05, P = 9.8e-05
 Identities = 26/58 (44%), Positives = 41/58 (70%), Frame = +3

Query:   158 IAAYRAKGKPDAAKKGVVKAEKSKKKK-EEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             I A + K K +  K+G  +    +  + EEEE+EE+EE+EEEEE+EE+E+EEE+++ E
Sbjct:   537 IIAKKKKKKEEKEKEGGGRGRGGEGGRGEEEEEEEEEEEEEEEEEEEEEEEEEEEEQE 710

 Score = 124 (43.7 bits), Expect = 0.00023, P = 0.00023
 Identities = 23/71 (32%), Positives = 47/71 (66%), Frame = +3

Query:   144 EKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEE 203
             +KK  K KE   +       +G+ +  ++   + E+ ++++EEEE+EE+E+++EE+E+EE
Sbjct:   555 KKKEEKEKEGGGRGRGGEGGRGEEEEEEEEEEEEEEEEEEEEEEEEEEEEQEQEEQEEEE 734

Query:   204 DEDEEEDDDDE 214
              E EE++ ++E
Sbjct:   735 QEQEEQEQEEE 767

 Score = 111 (39.1 bits), Expect = 0.0077, P = 0.0076
 Identities = 23/74 (31%), Positives = 47/74 (63%), Frame = +3

Query:   144 EKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEE 203
             +KK  K KE   +       +G+ +  ++   + E+ ++++EEEE+EE+E+++EE+E+EE
Sbjct:   555 KKKEEKEKEGGGRGRGGEGGRGEEEEEEEEEEEEEEEEEEEEEEEEEEEEQEQEEQEEEE 734

Query:   204 DEDEEEDDDDE--- 214
              E EE++ ++E   
Sbjct:   735 QEQEEQEQEEEQEQ 776

 Score = 109 (38.4 bits), Expect = 0.013, P = 0.013
 Identities = 23/75 (30%), Positives = 47/75 (62%), Frame = +3

Query:   144 EKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEE 203
             +KK  K KE   +       +G+ +  ++   + E+ ++++EEEE+EE+E+++EE+E+EE
Sbjct:   555 KKKEEKEKEGGGRGRGGEGGRGEEEEEEEEEEEEEEEEEEEEEEEEEEEEQEQEEQEEEE 734

Query:   204 DEDEEEDDDDE---- 214
              E EE++ ++E    
Sbjct:   735 QEQEEQEQEEEQEQQ 779

 Score = 107 (37.7 bits), Expect = 0.022, P = 0.022
 Identities = 23/76 (30%), Positives = 47/76 (61%), Frame = +3

Query:   144 EKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEE 203
             +KK  K KE   +       +G+ +  ++   + E+ ++++EEEE+EE+E+++EE+E+EE
Sbjct:   555 KKKEEKEKEGGGRGRGGEGGRGEEEEEEEEEEEEEEEEEEEEEEEEEEEEQEQEEQEEEE 734

Query:   204 DEDEEEDDDDE----- 214
              E EE++ ++E     
Sbjct:   735 QEQEEQEQEEEQEQQQ 782

 Score = 105 (37.0 bits), Expect = 0.038, P = 0.037
 Identities = 23/77 (29%), Positives = 47/77 (61%), Frame = +3

Query:   144 EKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEE 203
             +KK  K KE   +       +G+ +  ++   + E+ ++++EEEE+EE+E+++EE+E+EE
Sbjct:   555 KKKEEKEKEGGGRGRGGEGGRGEEEEEEEEEEEEEEEEEEEEEEEEEEEEQEQEEQEEEE 734

Query:   204 DEDEEEDDDDE------ 214
              E EE++ ++E      
Sbjct:   735 QEQEEQEQEEEQEQQQQ 785

 Score = 81 (28.5 bits), Expect = 5.3, Sum P(2) = 0.99
 Identities = 12/31 (38%), Positives = 25/31 (80%), Frame = +3

Query:   178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEE 208
             E+ +++++EEE++E EE E+EEE E+ + ++
Sbjct:   699 EEQEQEEQEEEEQEQEEQEQEEEQEQQQQQQ 791

 Score = 47 (16.5 bits), Expect = 5.3, Sum P(2) = 0.99
 Identities = 14/46 (30%), Positives = 23/46 (50%), Frame = +1

Query:    47 RWKTMSAKEKGKFEDMAKADKARYEREMKTYIPPKGETKKKFKDPN 92
             R K    +E+ K E+  K  K + +++ K     K + KKK K+ N
Sbjct:   574 RRKEEEEEEEEKEEEEKKKKKKKKKKKKKKKKKKKKKKKKKKKNKN 711

 Score = 45 (15.8 bits), Expect = 8.3, Sum P(2) = 1.0
 Identities = 14/60 (23%), Positives = 27/60 (45%), Frame = +1

Query:    37 FSEFSKKCSERWKTMSAKEKGKFEDMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKR 96
             F + + K  +R +    + + K E+  + +K   E++ K     K + KKK K     K+
Sbjct:   517 FKKVNIKL*QRRRKRRRRRRRKEEEEEEEEKEEEEKKKKKKKKKKKKKKKKKKKKKKKKK 696


>L21693 Human (clone pHG2) prothymosin alpha gene, complete cds.
        Length = 333

  Plus Strand HSPs:

 Score = 123 (43.3 bits), Expect = 3.2e-06, P = 3.2e-06
 Identities = 28/65 (43%), Positives = 39/65 (60%), Frame = +1

Query:   150 LKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEE 209
             LKEK  K++      G+ DA   G    E  +++ + E DEE+EE  EEEE+EE+ D EE
Sbjct:    49 LKEK--KEVVEEAENGR-DAPANGNANEENGEQEADSEVDEEEEEGGEEEEEEEEGDGEE 219

Query:   210 DDDDE 214
             +D DE
Sbjct:   220 EDGDE 234

 Score = 108 (38.0 bits), Expect = 0.00018, P = 0.00018
 Identities = 28/67 (41%), Positives = 42/67 (62%), Frame = +1

Query:   150 LKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEE--DEEEEEDE---ED 204
             LKEK  K++      G+ DA   G    E  +++ + E DEE+EE  +EEEEE+E   E+
Sbjct:    49 LKEK--KEVVEEAENGR-DAPANGNANEENGEQEADSEVDEEEEEGGEEEEEEEEGDGEE 219

Query:   205 EDEEEDDDDE 214
             ED +ED++ E
Sbjct:   220 EDGDEDEEAE 249

 Score = 80 (28.2 bits), Expect = 0.51, P = 0.40
 Identities = 23/62 (37%), Positives = 36/62 (58%), Frame = +1

Query:   160 AYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDE---------DEEED 210
             A    G+ +A  + V + E+   ++EEEE+E D E+E+ +EDEE E         D+E+D
Sbjct:   115 ANEENGEQEADSE-VDEEEEEGGEEEEEEEEGDGEEEDGDEDEEAESPTGKRAAEDDEDD 291

Query:   211 DDD 213
             D D
Sbjct:   292 DVD 300


>M14794 Human prothymosin alpha mRNA, lymphocyte clone pIF536.
        Length = 333

  Plus Strand HSPs:

 Score = 123 (43.3 bits), Expect = 3.2e-06, P = 3.2e-06
 Identities = 28/65 (43%), Positives = 39/65 (60%), Frame = +3

Query:   150 LKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEE 209
             LKEK  K++      G+ DA   G    E  +++ + E DEE+EE  EEEE+EE+ D EE
Sbjct:   117 LKEK--KEVVEEAENGR-DAPANGNANEENGEQEADNEVDEEEEEGGEEEEEEEEGDGEE 287

Query:   210 DDDDE 214
             +D DE
Sbjct:   288 EDGDE 302

 Score = 108 (38.0 bits), Expect = 0.00018, P = 0.00018
 Identities = 28/67 (41%), Positives = 42/67 (62%), Frame = +3

Query:   150 LKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEE--DEEEEEDE---ED 204
             LKEK  K++      G+ DA   G    E  +++ + E DEE+EE  +EEEEE+E   E+
Sbjct:   117 LKEK--KEVVEEAENGR-DAPANGNANEENGEQEADNEVDEEEEEGGEEEEEEEEGDGEE 287

Query:   205 EDEEEDDDDE 214
             ED +ED++ E
Sbjct:   288 EDGDEDEEAE 317


>D78176 Mouse DNA for primary transcript of atrial natriuretic clearance
        Length = 2384

  Plus Strand HSPs:

 Score = 138 (48.6 bits), Expect = 3.8e-06, P = 3.8e-06
 Identities = 23/39 (58%), Positives = 36/39 (92%), Frame = +2

Query:   176 KAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             +  + KK+KEEEE+EE+EE+EEEEE+EE+E+EEE++++E
Sbjct:   368 RRREEKKEKEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 484

 Score = 138 (48.6 bits), Expect = 3.8e-06, P = 3.8e-06
 Identities = 23/44 (52%), Positives = 39/44 (88%), Frame = +2

Query:   171 KKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             +KG  +  + +KK++EEE+EE+EE+EEEEE+EE+E+EEE++++E
Sbjct:   350 RKGRRRRRREEKKEKEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 481

 Score = 135 (47.5 bits), Expect = 9.6e-06, P = 9.6e-06
 Identities = 22/39 (56%), Positives = 37/39 (94%), Frame = +2

Query:   176 KAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             + E+ K+K+EEEE+EE+EE+EEEEE+EE+E+EEE+++++
Sbjct:   371 RREEKKEKEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEK 487

 Score = 131 (46.1 bits), Expect = 3.0e-05, P = 3.0e-05
 Identities = 23/44 (52%), Positives = 39/44 (88%), Frame = +2

Query:   171 KKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             +KG  +  + ++KKE+EE+EE+EE+EEEEE+EE+E+EEE++++E
Sbjct:   350 RKGR-RRRRREEKKEKEEEEEEEEEEEEEEEEEEEEEEEEEEEE 478

 Score = 119 (41.9 bits), Expect = 0.00082, P = 0.00082
 Identities = 27/63 (42%), Positives = 42/63 (66%), Frame = +2

Query:   150 LKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEE 209
             LK+K  +     R + K    ++   K EK ++++EEEE+EE+EE+EEEEE+EE+E+EEE
Sbjct:   305 LKKKKRRRRRRRRRRRKGRRRRRREEKKEKEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 484

Query:   210 --- 209
                
Sbjct:   485 KKK 493

 Score = 117 (41.2 bits), Expect = 0.0014, P = 0.0014
 Identities = 27/64 (42%), Positives = 42/64 (65%), Frame = +2

Query:   150 LKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEE 209
             LK+K  +     R + K    ++   K EK ++++EEEE+EE+EE+EEEEE+EE+E+EEE
Sbjct:   305 LKKKKRRRRRRRRRRRKGRRRRRREEKKEKEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 484

Query:   210 ---- 209
                 
Sbjct:   485 KKKK 496


>X79327 R.norvegicus (Sprague Dawley) calreticulin mRNA.
        Length = 1539

  Plus Strand HSPs:

 Score = 137 (48.2 bits), Expect = 4.4e-06, P = 4.4e-06
 Identities = 35/95 (36%), Positives = 57/95 (60%), Frame = +2

Query:   118 GLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKA 177
             GL +  V  K G +++N    + + Y ++         K  A  + K K D  ++ + + 
Sbjct:   956 GLDLWQV--KSGTIFDNFLITNDEAYAEEFGNETWGVTK-AAEKQMKDKQDEEQR-LKEE 1123

Query:   178 EKSKKKKEEEE--DEEDEEDEEEEEDEEDEDEEEDDD 212
             E+ KK+KEEEE  D+EDE+D +E+EDEEDE EE+++D
Sbjct:  1124 EEDKKRKEEEEAEDKEDEDDRDEDEDEEDEKEEDEED 1234

 Score = 118 (41.5 bits), Expect = 0.00094, P = 0.00094
 Identities = 24/53 (45%), Positives = 40/53 (75%), Frame = +2

Query:   165 GKPDAAKKGVV-KAEKSKKKKEEEEDEE--DEEDEEEEEDEEDEDEEEDDDDE 214
             G   AA+K +  K ++ ++ KEEEED++  +EE+ E++EDE+D DE+ED++DE
Sbjct:  1055 GVTKAAEKQMKDKQDEEQRLKEEEEDKKRKEEEEAEDKEDEDDRDEDEDEEDE 1213

 Score = 109 (38.4 bits), Expect = 0.011, P = 0.011
 Identities = 29/90 (32%), Positives = 52/90 (57%), Frame = +2

Query:   125 AKKLG-EMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKK 183
             A++ G E W  T A +KQ        +K+K +++    R K + +  K+   K E+  + 
Sbjct:  1028 AEEFGNETWGVTKAAEKQ--------MKDKQDEE---QRLKEEEEDKKR---KEEEEAED 1165

Query:   184 KEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             KE+E+D +++EDEE+E++E++ED      DE
Sbjct:  1166 KEDEDDRDEDEDEEDEKEEDEEDATGQAKDE 1258


>L05517 Plasmodium chabaudi DNA sequence, exon 1.
        Length = 1596

  Plus Strand HSPs:

 Score = 137 (48.2 bits), Expect = 4.5e-06, P = 4.5e-06
 Identities = 24/40 (60%), Positives = 36/40 (90%), Frame = +1

Query:   175 VKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             +K+E S ++K EEE+EE+EE+EEEEE+EE+E+EE+DD +E
Sbjct:    16 MKSEDSTEEKTEEEEEEEEEEEEEEEEEEEEEEEQDDPEE 135

 Score = 115 (40.5 bits), Expect = 0.0022, P = 0.0022
 Identities = 20/32 (62%), Positives = 30/32 (93%), Frame = +1

Query:   178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEE 209
             EK+++++EEEE+EE+EE+EEEEE+EE +D EE
Sbjct:    40 EKTEEEEEEEEEEEEEEEEEEEEEEEQDDPEE 135

 Score = 104 (36.6 bits), Expect = 0.041, P = 0.041
 Identities = 20/34 (58%), Positives = 30/34 (88%), Frame = +1

Query:   178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEE-- 209
             EK+++++EEEE+EE+EE+EEEEE+EE +D EE  
Sbjct:    40 EKTEEEEEEEEEEEEEEEEEEEEEEEQDDPEELE 141

 Score = 92 (32.4 bits), Expect = 0.98, P = 0.63
 Identities = 20/42 (47%), Positives = 31/42 (73%), Frame = +1

Query:   178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEE---------D 210
             EK+++++EEEE+EE+EE+EEEEE+EE +D EE         +
Sbjct:    40 EKTEEEEEEEEEEEEEEEEEEEEEEEQDDPEELELIKEETEE 165


>X07699 Mouse nucleolin gene
        Length = 11,478

  Plus Strand HSPs:

 Score = 138 (48.6 bits), Expect = 4.8e-06, P = 4.8e-06
 Identities = 27/64 (42%), Positives = 47/64 (73%), Frame = +1

Query:   150 LKEKYEKDIAAYRAKGKPDAAKKGVVKAEK-SKKKKEEEEDEEDEEDEEEEEDEEDEDEE 208
             L +  E+ +    AKGK   AK   +KA+  ++++ +EEEDE+DE++++EEED+ED+DEE
Sbjct:  4501 LPDSEEEVMEITTAKGKKTPAKVVPMKAKSVAEEEDDEEEDEDDEDEDDEEEDDEDDDEE 4680

Query:   209 EDDD 212
             E+++
Sbjct:  4681 EEEE 4692

 Score = 138 (48.6 bits), Expect = 4.8e-06, P = 4.8e-06
 Identities = 28/65 (43%), Positives = 45/65 (69%), Frame = +1

Query:   150 LKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEE 209
             L +  E+ +    AKGK   AK   V   K+K   EEE+DEE++ED+E+E+DEE++DE++
Sbjct:  4501 LPDSEEEVMEITTAKGKKTPAK---VVPMKAKSVAEEEDDEEEDEDDEDEDDEEEDDEDD 4671

Query:   210 DDDDE 214
             D+++E
Sbjct:  4672 DEEEE 4686

 Score = 116 (40.8 bits), Expect = 0.0022, P = 0.0022
 Identities = 24/59 (40%), Positives = 39/59 (66%), Frame = +2

Query:   160 AYRAKGK-PDAAKKGVV---KAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             A +AK   P   KKG     K  K+ K  ++E+ +EDE++E+E++ +EDED+EE+D+ E
Sbjct:  3995 AAQAKALVPTPGKKGAATPAKGAKNGKNAKKEDSDEDEDEEDEDDSDEDEDDEEEDEFE 4171

 Score = 114 (40.1 bits), Expect = 0.0038, P = 0.0038
 Identities = 24/48 (50%), Positives = 34/48 (70%), Frame = +2

Query:   165 GKPDAAK--KGVVKAEKSKKK-KEEEEDEEDEEDEEEEEDEEDEDEEE 209
             GK  AA   KG    + +KK+  +E+EDEEDE+D +E+ED+E+EDE E
Sbjct:  4028 GKKGAATPAKGAKNGKNAKKEDSDEDEDEEDEDDSDEDEDDEEEDEFE 4171

 Score = 112 (39.4 bits), Expect = 0.0065, P = 0.0065
 Identities = 24/55 (43%), Positives = 34/55 (61%), Frame = +2

Query:   160 AYRAKGK-PDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             A +AK   P   KKG     K  K  +  + E+ +EDE+EE DE+D DE+EDD++E
Sbjct:  3995 AAQAKALVPTPGKKGAATPAKGAKNGKNAKKEDSDEDEDEE-DEDDSDEDEDDEEE 4159

 Score = 108 (38.0 bits), Expect = 0.019, P = 0.019
 Identities = 21/46 (45%), Positives = 29/46 (63%), Frame = +2

Query:   168 DAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDD 213
             D  +  +VK  K  K        EDEED+E+E+DEED+DEEE+D +
Sbjct:  4160 DEFEPPIVKGVKPAKAAPAAPASEDEEDDEDEDDEEDDDEEEEDGE 4297

 Score = 105 (37.0 bits), Expect = 0.041, P = 0.041
 Identities = 20/45 (44%), Positives = 34/45 (75%), Frame = +1

Query:   163 AKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDE 207
             AK  P  AK  V + E  +++ E++EDE+DEE+++E++DEE+E+E
Sbjct:  4561 AKVVPMKAKS-VAEEEDDEEEDEDDEDEDDEEEDDEDDDEEEEEE 4692

 Score = 98 (34.5 bits), Expect = 0.26, P = 0.23
 Identities = 22/40 (55%), Positives = 29/40 (72%), Frame = +2

Query:   172 KGV--VKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEED 210
             KGV   KA  +    E+EED+EDE+DEE++ DEE+ED E D
Sbjct:  4184 KGVKPAKAAPAAPASEDEEDDEDEDDEEDD-DEEEEDGELD 4303

 Score = 84 (29.6 bits), Expect = 9.9, P = 1.0
 Identities = 14/18 (77%), Positives = 18/18 (100%), Frame = +2

Query:   197 EEEEDEEDEDEEEDDDDE 214
             E+EED+EDED+EEDDD+E
Sbjct:  4229 EDEEDDEDEDDEEDDDEE 4282


>D78308 Rat mRNA for calreticulin, complete cds.
        Length = 1816

  Plus Strand HSPs:

 Score = 137 (48.2 bits), Expect = 4.8e-06, P = 4.8e-06
 Identities = 35/95 (36%), Positives = 57/95 (60%), Frame = +1

Query:   118 GLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKA 177
             GL +  V  K G +++N    + + Y ++         K  A  + K K D  ++ + + 
Sbjct:   958 GLDLWQV--KSGTIFDNFLITNDEAYAEEFGNETWGVTK-AAEKQMKDKQDEEQR-LKEE 1125

Query:   178 EKSKKKKEEEE--DEEDEEDEEEEEDEEDEDEEEDDD 212
             E+ KK+KEEEE  D+EDE+D +E+EDEEDE EE+++D
Sbjct:  1126 EEDKKRKEEEEAEDKEDEDDRDEDEDEEDEKEEDEED 1236

 Score = 118 (41.5 bits), Expect = 0.0010, P = 0.0010
 Identities = 24/53 (45%), Positives = 40/53 (75%), Frame = +1

Query:   165 GKPDAAKKGVV-KAEKSKKKKEEEEDEE--DEEDEEEEEDEEDEDEEEDDDDE 214
             G   AA+K +  K ++ ++ KEEEED++  +EE+ E++EDE+D DE+ED++DE
Sbjct:  1057 GVTKAAEKQMKDKQDEEQRLKEEEEDKKRKEEEEAEDKEDEDDRDEDEDEEDE 1215

 Score = 109 (38.4 bits), Expect = 0.011, P = 0.011
 Identities = 29/90 (32%), Positives = 52/90 (57%), Frame = +1

Query:   125 AKKLG-EMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKK 183
             A++ G E W  T A +KQ        +K+K +++    R K + +  K+   K E+  + 
Sbjct:  1030 AEEFGNETWGVTKAAEKQ--------MKDKQDEE---QRLKEEEEDKKR---KEEEEAED 1167

Query:   184 KEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             KE+E+D +++EDEE+E++E++ED      DE
Sbjct:  1168 KEDEDDRDEDEDEEDEKEEDEEDATGQAKDE 1260


>M92988 Mouse calregulin (ERp60) mRNA, complete cds.
        Length = 1873

  Plus Strand HSPs:

 Score = 137 (48.2 bits), Expect = 4.8e-06, P = 4.8e-06
 Identities = 32/97 (32%), Positives = 58/97 (59%), Frame = +3

Query:   118 GLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKA 177
             GL +  V  K G +++N    + + Y ++         K  A  + K K D  ++ + + 
Sbjct:  1011 GLDLWQV--KSGTIFDNFLITNDEAYAEEFGNETWGVTK-AAEKQMKDKQDEEQR-LKEE 1178

Query:   178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             E+ KK+KEEEE E+ E+D++ +EDE++EDE+E+D++E
Sbjct:  1179 EEDKKRKEEEEAEDKEDDDDRDEDEDEEDEKEEDEEE 1289

 Score = 130 (45.8 bits), Expect = 3.6e-05, P = 3.6e-05
 Identities = 33/95 (34%), Positives = 57/95 (60%), Frame = +3

Query:   118 GLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKA 177
             GL +  V  K G +++N    + + Y ++         K  A  + K K D  ++ + + 
Sbjct:  1011 GLDLWQV--KSGTIFDNFLITNDEAYAEEFGNETWGVTK-AAEKQMKDKQDEEQR-LKEE 1178

Query:   178 EKSKKKKEEEE--DEEDEEDEEEEEDEEDEDEEEDDD 212
             E+ KK+KEEEE  D+ED++D +E+EDEEDE EE++++
Sbjct:  1179 EEDKKRKEEEEAEDKEDDDDRDEDEDEEDEKEEDEEE 1289

 Score = 103 (36.3 bits), Expect = 0.057, P = 0.055
 Identities = 27/90 (30%), Positives = 52/90 (57%), Frame = +3

Query:   125 AKKLG-EMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKK 183
             A++ G E W  T A +KQ        +K+K +++    R K + +  K+   K E+  + 
Sbjct:  1083 AEEFGNETWGVTKAAEKQ--------MKDKQDEE---QRLKEEEEDKKR---KEEEEAED 1220

Query:   184 KEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             KE+++D +++EDEE+E++E++E+      DE
Sbjct:  1221 KEDDDDRDEDEDEEDEKEEDEEESPGQAKDE 1313


>X53363 Rat mRNA for calreticulin
        Length = 1882

  Plus Strand HSPs:

 Score = 137 (48.2 bits), Expect = 4.8e-06, P = 4.8e-06
 Identities = 35/95 (36%), Positives = 57/95 (60%), Frame = +3

Query:   118 GLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKA 177
             GL +  V  K G +++N    + + Y ++         K  A  + K K D  ++ + + 
Sbjct:   978 GLDLWQV--KSGTIFDNFLITNDEAYAEEFGNETWGVTK-AAEKQMKDKQDEEQR-LKEE 1145

Query:   178 EKSKKKKEEEE--DEEDEEDEEEEEDEEDEDEEEDDD 212
             E+ KK+KEEEE  D+EDE+D +E+EDEEDE EE+++D
Sbjct:  1146 EEDKKRKEEEEAEDKEDEDDRDEDEDEEDEKEEDEED 1256

 Score = 118 (41.5 bits), Expect = 0.0010, P = 0.0010
 Identities = 24/53 (45%), Positives = 40/53 (75%), Frame = +3

Query:   165 GKPDAAKKGVV-KAEKSKKKKEEEEDEE--DEEDEEEEEDEEDEDEEEDDDDE 214
             G   AA+K +  K ++ ++ KEEEED++  +EE+ E++EDE+D DE+ED++DE
Sbjct:  1077 GVTKAAEKQMKDKQDEEQRLKEEEEDKKRKEEEEAEDKEDEDDRDEDEDEEDE 1235

 Score = 109 (38.4 bits), Expect = 0.011, P = 0.011
 Identities = 29/90 (32%), Positives = 52/90 (57%), Frame = +3

Query:   125 AKKLG-EMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKK 183
             A++ G E W  T A +KQ        +K+K +++    R K + +  K+   K E+  + 
Sbjct:  1050 AEEFGNETWGVTKAAEKQ--------MKDKQDEE---QRLKEEEEDKKR---KEEEEAED 1187

Query:   184 KEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             KE+E+D +++EDEE+E++E++ED      DE
Sbjct:  1188 KEDEDDRDEDEDEEDEKEEDEEDATGQAKDE 1280


>X14926 Mouse mRNA for calreticulin
        Length = 2114

  Plus Strand HSPs:

 Score = 137 (48.2 bits), Expect = 5.1e-06, P = 5.1e-06
 Identities = 32/97 (32%), Positives = 58/97 (59%), Frame = +1

Query:   118 GLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKA 177
             GL +  V  K G +++N    + + Y ++         K  A  + K K D  ++ + + 
Sbjct:  1012 GLDLWQV--KSGTIFDNFLITNDEAYAEEFGNETWGVTK-AAEKQMKDKQDEEQR-LKEE 1179

Query:   178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             E+ KK+KEEEE E+ E+D++ +EDE++EDE+E+D++E
Sbjct:  1180 EEDKKRKEEEEAEDKEDDDDRDEDEDEEDEKEEDEEE 1290

 Score = 130 (45.8 bits), Expect = 3.8e-05, P = 3.8e-05
 Identities = 33/95 (34%), Positives = 57/95 (60%), Frame = +1

Query:   118 GLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKA 177
             GL +  V  K G +++N    + + Y ++         K  A  + K K D  ++ + + 
Sbjct:  1012 GLDLWQV--KSGTIFDNFLITNDEAYAEEFGNETWGVTK-AAEKQMKDKQDEEQR-LKEE 1179

Query:   178 EKSKKKKEEEE--DEEDEEDEEEEEDEEDEDEEEDDD 212
             E+ KK+KEEEE  D+ED++D +E+EDEEDE EE++++
Sbjct:  1180 EEDKKRKEEEEAEDKEDDDDRDEDEDEEDEKEEDEEE 1290

 Score = 103 (36.3 bits), Expect = 0.058, P = 0.057
 Identities = 27/90 (30%), Positives = 52/90 (57%), Frame = +1

Query:   125 AKKLG-EMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKK 183
             A++ G E W  T A +KQ        +K+K +++    R K + +  K+   K E+  + 
Sbjct:  1084 AEEFGNETWGVTKAAEKQ--------MKDKQDEE---QRLKEEEEDKKR---KEEEEAED 1221

Query:   184 KEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             KE+++D +++EDEE+E++E++E+      DE
Sbjct:  1222 KEDDDDRDEDEDEEDEKEEDEEESPGQAKDE 1314


>S79240 Lox4=Ultrabithorax/abdominal-A homolog [Hirudo medicinalis=leeches,
        Length = 2336

  Plus Strand HSPs:

 Score = 137 (48.2 bits), Expect = 5.2e-06, P = 5.2e-06
 Identities = 37/106 (34%), Positives = 60/106 (56%), Frame = +2

Query:   109 RPKIKGEHPGLS-IGDVAK-KLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGK 166
             R K+K E   +  + +V K K G + +NT  ++ Q               D +   A+ +
Sbjct:   740 RMKVKKEKQQIKELNEVGKGKEGSVNSNTPGNNNQNDNDNNNNNNSNLSSDTSD--AEWE 913

Query:   167 PDAAKKGVVKAEKSKKKKEEEEDEED--EEDEEEEEDEEDEDEEEDDD 212
                ++K +   +   +K+EEE+DEED  EED+EEE+DEE+EDEEE+D+
Sbjct:   914 NSVSEKEMEN*KLQLEKEEEEDDEEDDEEEDDEEEDDEEEEDEEEEDE 1057

 Score = 137 (48.2 bits), Expect = 5.2e-06, P = 5.2e-06
 Identities = 36/106 (33%), Positives = 61/106 (57%), Frame = +2

Query:   109 RPKIKGEHPGLS-IGDVAK-KLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGK 166
             R K+K E   +  + +V K K G + +NT  ++ Q               D +   A+ +
Sbjct:   740 RMKVKKEKQQIKELNEVGKGKEGSVNSNTPGNNNQNDNDNNNNNNSNLSSDTSD--AEWE 913

Query:   167 PDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
                ++K   + E  K + E+EE+E+DEED+EEE+DEE++DEEE+D++E
Sbjct:   914 NSVSEK---EMEN*KLQLEKEEEEDDEEDDEEEDDEEEDDEEEEDEEE 1048


>X17199 Chicken mRNA for nucleolin C23
        Length = 2576

  Plus Strand HSPs:

 Score = 137 (48.2 bits), Expect = 5.4e-06, P = 5.4e-06
 Identities = 42/135 (31%), Positives = 64/135 (47%), Frame = +2

Query:    80 PKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADD 139
             PK + K+K   P  PK+   +      E       E  G  +    KK  +     A   
Sbjct:   122 PKNQMKQKKMAP-PPKKVEES-----EEEESSDLEESSGEEVMVPPKKQQKAAVTPAKKA 283

Query:   140 KQPYEKKAAKLKEKY---EKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDE 196
               P +K A   K+     +K +A    K    + KK  V  + +K  K  +++E +EEDE
Sbjct:   284 ATPAKKAATPAKKAVTPAKKAVATPAKKAVAPSPKKAAVVGKGAKNGKNAKKEESEEEDE 463

Query:   197 EEEEDEEDEDEEEDDDDE 214
             ++E+DEEDEDEEE+ D+E
Sbjct:   464 DDEDDEEDEDEEEESDEE 517

 Score = 134 (47.2 bits), Expect = 1.3e-05, P = 1.3e-05
 Identities = 26/49 (53%), Positives = 37/49 (75%), Frame = +2

Query:   166 KPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             KP  AK    KA   K + E+EEDEEDE+++EE+ED+E+EDEEE +D++
Sbjct:   707 KPTPAKATPAKA---KAESEDEEDEEDEDEDEEDEDDEEEDEEESEDEK 844

 Score = 127 (44.7 bits), Expect = 9.2e-05, P = 9.2e-05
 Identities = 43/134 (32%), Positives = 65/134 (48%), Frame = +2

Query:    80 PKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADD 139
             PK + K+K   P  PK+   +      E       E  G  +    KK  +     A   
Sbjct:   122 PKNQMKQKKMAP-PPKKVEES-----EEEESSDLEESSGEEVMVPPKKQQKAAVTPAKKA 283

Query:   140 KQPYEKKAAKLKEKY---EKDIAAYRAKGKPDAAKKGVV-----KAEKSKKKKEEEEDEE 191
               P +K A   K+     +K +A    K    + KK  V     K  K+ KK+E EE++E
Sbjct:   284 ATPAKKAATPAKKAVTPAKKAVATPAKKAVAPSPKKAAVVGKGAKNGKNAKKEESEEEDE 463

Query:   192 DEEDEEEEEDEEDEDEEEDD 211
             D+ED+EE+EDEE+E +EE++
Sbjct:   464 DDEDDEEDEDEEEESDEEEE 523

 Score = 126 (44.4 bits), Expect = 0.00012, P = 0.00012
 Identities = 21/39 (53%), Positives = 32/39 (82%), Frame = +2

Query:   172 KGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEED 210
             KG    + +KK++ EEEDE+DE+DEE+E++EE+ DEEE+
Sbjct:   407 KGAKNGKNAKKEESEEEDEDDEDDEEDEDEEEESDEEEE 523

 Score = 111 (39.1 bits), Expect = 0.0073, P = 0.0072
 Identities = 27/71 (38%), Positives = 41/71 (57%), Frame = +2

Query:   138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDE-EDE 196
             DD++  E+      E  +   A  + K  P  A     KAE   ++ EE+EDE++E ED+
Sbjct:   632 DDEEEDEEDDESEDEAMDTTPAPVK-KPTPAKATPAKAKAESEDEEDEEDEDEDEEDEDD 808

Query:   197 EEEEDEEDEDEE 208
             EEE++EE EDE+
Sbjct:   809 EEEDEEESEDEK 844

 Score = 107 (37.7 bits), Expect = 0.021, P = 0.021
 Identities = 32/93 (34%), Positives = 45/93 (48%), Frame = +2

Query:   118 GLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKA 177
             G   G  AKK      +   +D +  E +  +  E+ E  +    A  K  AA      A
Sbjct:   410 GAKNGKNAKKEESEEEDEDDEDDEEDEDEEEESDEEEEPAVPVKPAAKKSAAAVPAKKPA 589

Query:   178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEED 210
                 K++ EEE+EED+E EE+EED+E EDE  D
Sbjct:   590 VVPAKQESEEEEEEDDE-EEDEEDDESEDEAMD 685

 Score = 107 (37.7 bits), Expect = 0.021, P = 0.021
 Identities = 37/94 (39%), Positives = 51/94 (54%), Frame = +2

Query:   118 GLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGV--V 175
             G   G  AKK  E       DD+   E +  + +E  E++  A   K  P AAKK    V
Sbjct:   410 GAKNGKNAKK--EESEEEDEDDEDDEEDEDEE-EESDEEEEPAVPVK--P-AAKKSAAAV 571

Query:   176 KAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDD 211
              A+K      ++E EE+EE+++EEEDEED DE ED+
Sbjct:   572 PAKKPAVVPAKQESEEEEEEDDEEEDEED-DESEDE 676

 Score = 95 (33.4 bits), Expect = 0.50, P = 0.39
 Identities = 35/97 (36%), Positives = 49/97 (50%), Frame = +2

Query:   118 GLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKA 177
             G   G  AKK  E       DD+   E +  + +E  E++  A   K  P AAKK    A
Sbjct:   410 GAKNGKNAKK--EESEEEDEDDEDDEEDEDEE-EESDEEEEPAVPVK--P-AAKKSAA-A 568

Query:   178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
               +KK       +E EE  EEEED+E+EDEE+D+ ++
Sbjct:   569 VPAKKPAVVPAKQESEE--EEEEDDEEEDEEDDESED 673


>X16481 Rat mRNA for zinc(2+) binding protein
        Length = 936

  Plus Strand HSPs:

 Score = 128 (45.1 bits), Expect = 5.8e-06, Sum P(2) = 5.8e-06
 Identities = 33/70 (47%), Positives = 47/70 (67%), Frame = +2

Query:   144 EKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEE 203
             E  A  LKEK  KD    +A G+ +  KK VV+ E++  ++EEEE  ED ED++E  DEE
Sbjct:   146 ELSAKDLKEK--KDKVEEKA-GRKER-KKEVVEEEENGAEEEEEETAEDGEDDDEG-DEE 310

Query:   204 DEDEEEDDDD 213
             DE+EEE++D+
Sbjct:   311 DEEEEEEEDE 340

 Score = 113 (39.8 bits), Expect = 0.00057, Sum P(2) = 0.00057
 Identities = 22/58 (37%), Positives = 38/58 (65%), Frame = +2

Query:   157 DIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             +++A   K K D  ++   + E+ K+  EEEE+  +EE+EE  ED ED+DE +++D+E
Sbjct:   146 ELSAKDLKEKKDKVEEKAGRKERKKEVVEEEENGAEEEEEETAEDGEDDDEGDEEDEE 319

 Score = 109 (38.4 bits), Expect = 0.0019, Sum P(2) = 0.0019
 Identities = 35/80 (43%), Positives = 50/80 (62%), Frame = +2

Query:   144 EKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEE-----DEEDEEDEEE 198
             E  A  LKEK  KD    +A G+ +  KK VV+ E++  ++EEEE     +++DE DEE+
Sbjct:   146 ELSAKDLKEK--KDKVEEKA-GRKER-KKEVVEEEENGAEEEEEETAEDGEDDDEGDEED 313

Query:   199 EEDEEDEDE---------EEDDDD 213
             EE+EE+EDE         EED+ D
Sbjct:   314 EEEEEEEDEGPVRKRTAEEEDEAD 385

 Score = 40 (14.1 bits), Expect = 5.8e-06, Sum P(2) = 5.8e-06
 Identities = 7/24 (29%), Positives = 12/24 (50%), Frame = +3

Query:    77 YIPPKGETKKKFKDPNAPKRPPSA 100
             ++PP      + +DP +P  P  A
Sbjct:    42 HLPPSRAPPPRPRDPGSPPAPAPA 113


>X54171;X53282 H.sapiens NG2-6 DNA
            Length = 6221

  Plus Strand HSPs:

 Score = 137 (48.2 bits), Expect = 6.3e-06, P = 6.3e-06
 Identities = 29/47 (61%), Positives = 37/47 (78%), Frame = +2

Query:   171 KKGVVKAEKSKKKKEE---EEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             KK   + E+ KKK+EE   EE+EE+EEDEEEEE+ E+E+EEED DDE
Sbjct:  4994 KKKEEEEERRKKKEEEGGEEEEEEEEEDEEEEEEVEEEEEEEDFDDE 5134

 Score = 127 (44.7 bits), Expect = 0.00011, P = 0.00011
 Identities = 38/119 (31%), Positives = 65/119 (54%), Frame = +2

Query:    97 PPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNT---AADDKQPYEKKAAKLKEK 153
             P   F L C      I G+H  +S+ + A+   E   +    +   KQ   +  A+  +K
Sbjct:  4790 PAMVFQLKCGSGPVYISGQHL-VSVEEDAESEDEEEEDVKLLSISGKQSALEVEARFHKK 4966

Query:   154 YEKDIAAYRAKGKPDAAKKGVVKAEKS--KKKKEEEEDEEDEEDEEEEEDEEDEDEEEDD 211
              E ++   + K K +  ++   K E+   ++++EEEEDEE+EE+ EEEE+EED D+EE +
Sbjct:  4967 -E*NLLLLKRKKKEEEEERRKKKEEEGGEEEEEEEEEDEEEEEEVEEEEEEEDFDDEETE 5143

Query:   212 D 212
             +
Sbjct:  5144 E 5146

 Score = 115 (40.5 bits), Expect = 0.0028, P = 0.0028
 Identities = 19/39 (48%), Positives = 34/39 (87%), Frame = +2

Query:   176 KAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             K E+ +++K++EE+  +EE+EEEEEDEE+E+E E++++E
Sbjct:  5000 KEEEEERRKKKEEEGGEEEEEEEEEDEEEEEEVEEEEEE 5116


>L13238 Rattus norvegicus polymeric immunoglobulin receptor mRNA, 3'
        Length = 120

  Plus Strand HSPs:

 Score = 124 (43.7 bits), Expect = 6.6e-06, P = 6.6e-06
 Identities = 20/34 (58%), Positives = 34/34 (100%), Frame = +1

Query:   181 KKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             ++++EEEE+EE+EE+EEEEE+EE+E+EEE++++E
Sbjct:     1 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 102

 Score = 124 (43.7 bits), Expect = 6.6e-06, P = 6.6e-06
 Identities = 20/34 (58%), Positives = 34/34 (100%), Frame = +1

Query:   181 KKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             ++++EEEE+EE+EE+EEEEE+EE+E+EEE++++E
Sbjct:     4 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 105

 Score = 123 (43.3 bits), Expect = 8.8e-06, P = 8.8e-06
 Identities = 20/35 (57%), Positives = 34/35 (97%), Frame = +1

Query:   178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDD 212
             E+ ++++EEEE+EE+EE+EEEEE+EE+E+EEE+++
Sbjct:     1 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 105

 Score = 113 (39.8 bits), Expect = 0.00013, P = 0.00013
 Identities = 19/32 (59%), Positives = 31/32 (96%), Frame = +1

Query:   178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEE 209
             E+ ++++EEEE+EE+EE+EEEEE+EE+E+EE+
Sbjct:    13 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEK 108

 Score = 109 (38.4 bits), Expect = 0.00038, P = 0.00038
 Identities = 18/32 (56%), Positives = 31/32 (96%), Frame = +1

Query:   178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEE 209
             E+ ++++EEEE+EE+EE+EEEEE+EE+E+E++
Sbjct:    16 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEKK 111

 Score = 105 (37.0 bits), Expect = 0.0011, P = 0.0011
 Identities = 17/32 (53%), Positives = 31/32 (96%), Frame = +1

Query:   178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEE 209
             E+ ++++EEEE+EE+EE+EEEEE+EE+E++++
Sbjct:    19 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEKKK 114

 Score = 102 (35.9 bits), Expect = 0.0024, P = 0.0024
 Identities = 17/32 (53%), Positives = 30/32 (93%), Frame = +1

Query:   178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEE 209
             E+ ++++EEEE+EE+EE+EEEEE+EE+E +++
Sbjct:    22 EEEEEEEEEEEEEEEEEEEEEEEEEEEEKKKK 117

 Score = 100 (35.2 bits), Expect = 0.0040, P = 0.0040
 Identities = 20/37 (54%), Positives = 31/37 (83%), Frame = +1

Query:   178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEE----- 209
             E+ ++++EEEE+EE+EE+EEEEE+EE+E+EEE     
Sbjct:    10 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEKKKKK 120


>L13200;L18807 C. elegans cosmid ZK1236.
            Length = 28,878

  Plus Strand HSPs:

 Score = 137 (48.2 bits), Expect = 6.8e-06, P = 6.8e-06
 Identities = 51/192 (26%), Positives = 97/192 (50%), Frame = +1

Query:    25 EHKKKHPDASVNFSEFSKKCSERWKTMSAKEK---GKFEDMAKADKARYEREMKTYIPPK 81
             E K+   D ++  + F+++ + + +  + K+K   GK    +KA  +  +    T  P +
Sbjct: 13957 EPKENIVDPTLIEAFFTREAARKAEIKAKKDKMAAGKKGASSKASASVSKASAST--PAR 14130

Query:    82 GETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQ 141
             G   K    P   K PP    L   + RP    +    S    +K   E       DD++
Sbjct: 14131 GA--KAAPKPPPKKSPPKRQRLAGGDIRPDSDTDEEHSSADKKSKAEDE---EEVEDDEE 14295

Query:   142 PYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKK-KKEEEED-----EEDEED 195
             P  KK  +++E+ E++ +      +     + + + EK ++ +KEEEED     E++E++
Sbjct: 14296 PVPKKKKEVQEEPEEEESVEGEDEEESQEVEDLKEDEKMEEDEKEEEEDVQLESEKNEKE 14475

Query:   196 EEEEEDEEDEDEEEDDDDE 214
             EEEE+ EE ++EEE++++E
Sbjct: 14476 EEEEKVEEKKEEEEEEEEE 14532

 Score = 133 (46.8 bits), Expect = 2.1e-05, P = 2.1e-05
 Identities = 51/193 (26%), Positives = 98/193 (50%), Frame = +1

Query:    25 EHKKKHPDASVNFSEFSKKCSERWKTMSAKEK---GKFEDMAKADKARYEREMKTYIPPK 81
             E K+   D ++  + F+++ + + +  + K+K   GK    +KA  +  +    T  P +
Sbjct: 13957 EPKENIVDPTLIEAFFTREAARKAEIKAKKDKMAAGKKGASSKASASVSKASAST--PAR 14130

Query:    82 GETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQ 141
             G   K    P   K PP    L   + RP    +    S    +K   E       DD++
Sbjct: 14131 GA--KAAPKPPPKKSPPKRQRLAGGDIRPDSDTDEEHSSADKKSKAEDE---EEVEDDEE 14295

Query:   142 PYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKK-KKEEEED-----EEDEED 195
             P  KK  +++E+ E++ +      +     + + + EK ++ +KEEEED     E++E++
Sbjct: 14296 PVPKKKKEVQEEPEEEESVEGEDEEESQEVEDLKEDEKMEEDEKEEEEDVQLESEKNEKE 14475

Query:   196 EEEEE-DEEDEDEEEDDDDE 214
             EEEE+ +E+ E+EEE++++E
Sbjct: 14476 EEEEKVEEKKEEEEEEEEEE 14535

 Score = 108 (38.0 bits), Expect = 0.18, Sum P(2) = 0.17
 Identities = 51/193 (26%), Positives = 90/193 (46%), Frame = +1

Query:    25 EHKKKHPDASVNFSEFSKKCSERWKTMSAKEK---GKFEDMAKADKARYEREMKTYIPPK 81
             E K+   D ++  + F+++ + + +  + K+K   GK    +KA  +  +    T  P +
Sbjct: 13957 EPKENIVDPTLIEAFFTREAARKAEIKAKKDKMAAGKKGASSKASASVSKASAST--PAR 14130

Query:    82 GETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQ 141
             G   K    P   K PP    L   + RP    +    S    +K   E       DD++
Sbjct: 14131 GA--KAAPKPPPKKSPPKRQRLAGGDIRPDSDTDEEHSSADKKSKAEDE---EEVEDDEE 14295

Query:   142 PYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKK-KKEEEED-------EEDE 193
             P  KK  +++E+ E++ +      +     + + + EK ++ +KEEEED        E E
Sbjct: 14296 PVPKKKKEVQEEPEEEESVEGEDEEESQEVEDLKEDEKMEEDEKEEEEDVQLESEKNEKE 14475

Query:   194 EDEE------EEEDEEDEDE 207
             E+EE      EEE+EE+E+E
Sbjct: 14476 EEEEKVEEKKEEEEEEEEEE 14535

 Score = 40 (14.1 bits), Expect = 0.18, Sum P(2) = 0.17
 Identities = 9/23 (39%), Positives = 13/23 (56%), Frame = +2

Query:   188 EDEEDEEDEEEEEDEEDEDEEED 210
             E +   EDEE   D E + +EE+
Sbjct: 23765 EHDNHREDEEVGIDYEQKKKEEN 23833

  Minus Strand HSPs:

 Score = 103 (36.3 bits), Expect = 0.072, P = 0.069
 Identities = 27/77 (35%), Positives = 46/77 (59%), Frame = -1

Query:   138 DDKQPYEKKAAKLKEKYEK-DIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEE-DEED 195
             D K+  ++KAAKL+ K EK  +  Y  + + +  ++   + E+ KK+ EE   EE DE+ 
Sbjct: 28080 DGKKIGKRKAAKLQAKEEKRQMREYEVREREERKRR---EEEREKKRDEERAKEEADEKA 27910

Query:   196 EEEEEDEEDEDEEEDDDDE 214
             EEE   +E E++E  + +E
Sbjct: 27909 EEERLRKEREEKERKEHEE 27853


>AB001489 Mus musculus DNA for polyimmunoglobulin receptor, complete cds.
          Length = 29,392

  Plus Strand HSPs:

 Score = 137 (48.2 bits), Expect = 6.8e-06, P = 6.8e-06
 Identities = 30/77 (38%), Positives = 50/77 (64%), Frame = +2

Query:   138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197
             D K+  E       E+ +K+    R  G+      G  + E+ ++++EEEE+EE+EE+EE
Sbjct: 28451 DSKKQEEGAGRGGVERGKKEKEKRRRGGRGGG---GGEEGEEEEEEEEEEEEEEEEEEEE 28621

Query:   198 EEEDEEDEDEEEDDDDE 214
             EEE+EE+EDEEE++++E
Sbjct: 28622 EEEEEEEEDEEEEEEEE 28672

 Score = 136 (47.9 bits), Expect = 8.9e-06, P = 8.9e-06
 Identities = 30/77 (38%), Positives = 52/77 (67%), Frame = +2

Query:   138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAA-KKGVVKAEKSKKKKEEEEDEEDEEDE 196
             D K+  E       E+ +K+    R  G+     ++G  + E+ ++++EEEE+EE+EE+E
Sbjct: 28451 DSKKQEEGAGRGGVERGKKEKEKRRRGGRGGGGGEEG--EEEEEEEEEEEEEEEEEEEEE 28624

Query:   197 EEEEDEEDEDEEEDDDDE 214
             EEEE+EEDE+EEE++++E
Sbjct: 28625 EEEEEEEDEEEEEEEEEE 28678

 Score = 134 (47.2 bits), Expect = 1.6e-05, P = 1.6e-05
 Identities = 22/37 (59%), Positives = 36/37 (97%), Frame = +2

Query:   178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             E+ ++++EEEE+EE+EEDEEEEE+EE+E+EEE++++E
Sbjct: 28595 EEEEEEEEEEEEEEEEEDEEEEEEEEEEEEEEEEEEE 28705

 Score = 134 (47.2 bits), Expect = 1.6e-05, P = 1.6e-05
 Identities = 22/37 (59%), Positives = 36/37 (97%), Frame = +2

Query:   178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             E+ ++++EEEE+EEDEE+EEEEE+EE+E+EEE++++E
Sbjct: 28604 EEEEEEEEEEEEEEDEEEEEEEEEEEEEEEEEEEEEE 28714

 Score = 134 (47.2 bits), Expect = 1.6e-05, P = 1.6e-05
 Identities = 22/37 (59%), Positives = 36/37 (97%), Frame = +2

Query:   178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             E+ ++++EEEEDEE+EE+EEEEE+EE+E+EEE++++E
Sbjct: 28613 EEEEEEEEEEEDEEEEEEEEEEEEEEEEEEEEEEEEE 28723

 Score = 128 (45.1 bits), Expect = 8.7e-05, P = 8.7e-05
 Identities = 28/65 (43%), Positives = 47/65 (72%), Frame = +2

Query:   151 KEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEE--EEDEEDEDEE 208
             KEK EK     R  G  +  ++   + E+ ++++EEEE+EE+EE+EEE  EE+EE+E+EE
Sbjct: 28505 KEK-EKRRRGGRGGGGGEEGEEEEEEEEEEEEEEEEEEEEEEEEEEEEDEEEEEEEEEEE 28681

Query:   209 EDDDDE 214
             E++++E
Sbjct: 28682 EEEEEE 28699

 Score = 127 (44.7 bits), Expect = 0.00011, P = 0.00011
 Identities = 20/37 (54%), Positives = 36/37 (97%), Frame = +2

Query:   178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             E+ ++++EEEE+EE+EE++EEEE+EE+E+EEE++++E
Sbjct: 28592 EEEEEEEEEEEEEEEEEEDEEEEEEEEEEEEEEEEEE 28702

 Score = 127 (44.7 bits), Expect = 0.00011, P = 0.00011
 Identities = 20/37 (54%), Positives = 36/37 (97%), Frame = +2

Query:   178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             E+ ++++EEEE+EE++E+EEEEE+EE+E+EEE++++E
Sbjct: 28601 EEEEEEEEEEEEEEEDEEEEEEEEEEEEEEEEEEEEE 28711

 Score = 127 (44.7 bits), Expect = 0.00011, P = 0.00011
 Identities = 20/37 (54%), Positives = 36/37 (97%), Frame = +2

Query:   178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             E+ ++++EEEE+E++EE+EEEEE+EE+E+EEE++++E
Sbjct: 28607 EEEEEEEEEEEEEDEEEEEEEEEEEEEEEEEEEEEEE 28717

 Score = 127 (44.7 bits), Expect = 0.00011, P = 0.00011
 Identities = 20/37 (54%), Positives = 36/37 (97%), Frame = +2

Query:   178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             E+ ++++EEEE++E+EE+EEEEE+EE+E+EEE++++E
Sbjct: 28610 EEEEEEEEEEEEDEEEEEEEEEEEEEEEEEEEEEEEE 28720

 Score = 127 (44.7 bits), Expect = 0.00011, P = 0.00011
 Identities = 20/37 (54%), Positives = 36/37 (97%), Frame = +2

Query:   178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             E+ ++++EEE++EE+EE+EEEEE+EE+E+EEE++++E
Sbjct: 28616 EEEEEEEEEEDEEEEEEEEEEEEEEEEEEEEEEEEEE 28726

 Score = 127 (44.7 bits), Expect = 0.00011, P = 0.00011
 Identities = 20/37 (54%), Positives = 36/37 (97%), Frame = +2

Query:   178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             E+ ++++EE+E+EE+EE+EEEEE+EE+E+EEE++++E
Sbjct: 28619 EEEEEEEEEDEEEEEEEEEEEEEEEEEEEEEEEEEEE 28729

 Score = 127 (44.7 bits), Expect = 0.00011, P = 0.00011
 Identities = 20/37 (54%), Positives = 36/37 (97%), Frame = +2

Query:   178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             E+ ++++E+EE+EE+EE+EEEEE+EE+E+EEE++++E
Sbjct: 28622 EEEEEEEEDEEEEEEEEEEEEEEEEEEEEEEEEEEEE 28732

 Score = 119 (41.9 bits), Expect = 0.00087, Sum P(2) = 0.00087
 Identities = 21/37 (56%), Positives = 32/37 (86%), Frame = +2

Query:   178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             E+  +++EEEE+EE+EE+EEEEE+EE+E+EEE   D+
Sbjct: 28637 EEEDEEEEEEEEEEEEEEEEEEEEEEEEEEEERQTDK 28747

 Score = 117 (41.2 bits), Expect = 0.0015, Sum P(2) = 0.0015
 Identities = 20/35 (57%), Positives = 31/35 (88%), Frame = +2

Query:   178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDD 212
             E+ ++++EEEE+EE+EE+EEEEE+EE+E+EE   D
Sbjct: 28640 EEDEEEEEEEEEEEEEEEEEEEEEEEEEEEERQTD 28744

 Score = 101 (35.6 bits), Expect = 0.12, Sum P(2) = 0.11
 Identities = 17/32 (53%), Positives = 29/32 (90%), Frame = +2

Query:   178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEE 209
             E+ ++++EEEE+EE+EE+EEEEE+EE+E + +
Sbjct: 28649 EEEEEEEEEEEEEEEEEEEEEEEEEEEERQTD 28744

 Score = 50 (17.6 bits), Expect = 0.00087, Sum P(2) = 0.00087
 Identities = 19/95 (20%), Positives = 38/95 (40%), Frame = +3

Query:     2 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 61
             +G+P  PR   +S  +     +   +++  +         +K  E  +    +EK K + 
Sbjct: 28392 QGNPWLPREFKASLGYIETWIQRSRRREQEEEE*KGGRRRRKKEEEEEEEEEEEK-KEKK 28568

Query:    62 MAKADKARYEREMKTYIPPKGETKKKFKDPNAPKR 96
               K  K + +++ K     K + KKK K     K+
Sbjct: 28569 KKKKKKKKKKKKKKKKKKKKKKKKKKMKKKKKKKK 28673

 Score = 43 (15.1 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
 Identities = 9/23 (39%), Positives = 13/23 (56%), Frame = +1

Query:    67 KARYEREMKTYIPPKGETKKKFK 89
             + RY     TY+P + +TK K K
Sbjct: 17107 QVRYTLNTFTYMPRQNKTKHKTK 17175


>U59897 Macropus robustus hypoxanthine phosphoribosyltransferase (Hprt)
        Length = 1228

  Plus Strand HSPs:

 Score = 135 (47.5 bits), Expect = 6.9e-06, P = 6.9e-06
 Identities = 24/70 (34%), Positives = 50/70 (71%), Frame = +3

Query:   145 KKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEED 204
             +K  + + K  +    +R + + +  ++   + E+ ++++EEEE+EE+EE+EEEEE+EE+
Sbjct:   960 RKRRRRRRKRRRRRWRWRMRREVEEIEEDEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 1139

Query:   205 EDEEEDDDDE 214
             E+EEE++++E
Sbjct:  1140 EEEEEEEEEE 1169

 Score = 130 (45.8 bits), Expect = 2.8e-05, P = 2.8e-05
 Identities = 21/37 (56%), Positives = 36/37 (97%), Frame = +3

Query:   178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             E+ ++++EEEE+EE+EE+EEEEE+EE+E+EEE++++E
Sbjct:  1062 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 1172

 Score = 130 (45.8 bits), Expect = 2.8e-05, P = 2.8e-05
 Identities = 21/37 (56%), Positives = 36/37 (97%), Frame = +3

Query:   178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             E+ ++++EEEE+EE+EE+EEEEE+EE+E+EEE++++E
Sbjct:  1065 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 1175

 Score = 130 (45.8 bits), Expect = 2.8e-05, P = 2.8e-05
 Identities = 21/37 (56%), Positives = 36/37 (97%), Frame = +3

Query:   178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             E+ ++++EEEE+EE+EE+EEEEE+EE+E+EEE++++E
Sbjct:  1068 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 1178

 Score = 130 (45.8 bits), Expect = 2.8e-05, P = 2.8e-05
 Identities = 21/37 (56%), Positives = 36/37 (97%), Frame = +3

Query:   178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             E+ ++++EEEE+EE+EE+EEEEE+EE+E+EEE++++E
Sbjct:  1071 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 1181

 Score = 130 (45.8 bits), Expect = 2.8e-05, P = 2.8e-05
 Identities = 21/37 (56%), Positives = 36/37 (97%), Frame = +3

Query:   178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             E+ ++++EEEE+EE+EE+EEEEE+EE+E+EEE++++E
Sbjct:  1074 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 1184

 Score = 130 (45.8 bits), Expect = 2.8e-05, P = 2.8e-05
 Identities = 21/37 (56%), Positives = 36/37 (97%), Frame = +3

Query:   178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             E+ ++++EEEE+EE+EE+EEEEE+EE+E+EEE++++E
Sbjct:  1077 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 1187

 Score = 129 (45.4 bits), Expect = 3.9e-05, P = 3.9e-05
 Identities = 21/36 (58%), Positives = 35/36 (97%), Frame = +3

Query:   178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDD 213
             E+ ++++EEEE+EE+EE+EEEEE+EE+E+EEE+++D
Sbjct:  1083 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEED 1190

 Score = 129 (45.4 bits), Expect = 3.9e-05, P = 3.9e-05
 Identities = 29/65 (44%), Positives = 42/65 (64%), Frame = +2

Query:   155 EKDIAAYRAK--GKPDAAKKGVVKAEK---SKKKKEEEEDEEDEEDEEEEEDEEDEDEEE 209
             E+D+     K    P  AK+   + +    SKK K  EEDEEDE++EEEEE+EE+ED++E
Sbjct:   737 EEDVEENNVKLVNLPLPAKRAASEIDDKIPSKKVKLSEEDEEDEDEEEEEEEEEEEDDDE 916

Query:   210 DDDDE 214
              +D+E
Sbjct:   917 AEDEE 931

 Score = 124 (43.7 bits), Expect = 0.00016, P = 0.00015
 Identities = 29/66 (43%), Positives = 43/66 (65%), Frame = +2

Query:   155 EKDIAAYRAK--GKPDAAKKGVVKAEK---SKKKK--EEEEDEEDEEDEEEEEDEEDEDE 207
             E+D+     K    P  AK+   + +    SKK K  EE+E++EDEE+EEEEE+EED+DE
Sbjct:   737 EEDVEENNVKLVNLPLPAKRAASEIDDKIPSKKVKLSEEDEEDEDEEEEEEEEEEEDDDE 916

Query:   208 EEDDDD 213
              ED+++
Sbjct:   917 AEDEEE 934

 Score = 117 (41.2 bits), Expect = 0.0011, P = 0.0011
 Identities = 41/119 (34%), Positives = 60/119 (50%), Frame = +2

Query:    97 PPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWN-----NTAA---DDKQPYEKKAA 148
             PP    L C      I G+H      DV +   ++ N       AA   DDK P +K   
Sbjct:   665 PPVVLRLKCGSGPVYISGQHLVALEEDVEENNVKLVNLPLPAKRAASEIDDKIPSKK--V 838

Query:   149 KLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDE-EDEDE 207
             KL E+ E+D      + + +       + E+  ++ +EEE+EE+EE+EEEEE+E E EDE
Sbjct:   839 KLSEEDEEDEDEEEEEEEEEEEDDDEAEDEEEIEEVDEEEEEEEEEEEEEEEEEVEVEDE 1018

Query:   208 E 208
             E
Sbjct:  1019 E 1021

 Score = 116 (40.8 bits), Expect = 0.0014, P = 0.0014
 Identities = 31/72 (43%), Positives = 44/72 (61%), Frame = +2

Query:   155 EKDIAAYRAK--GKPDAAKKGVVKAEK---SKKKK--EEEEDEEDEEDEEEEEDEEDEDE 207
             E+D+     K    P  AK+   + +    SKK K  EE+E++EDEE+EEEEE+EED+DE
Sbjct:   737 EEDVEENNVKLVNLPLPAKRAASEIDDKIPSKKVKLSEEDEEDEDEEEEEEEEEEEDDDE 916

Query:   208 EEDDD-----DE 214
              ED++     DE
Sbjct:   917 AEDEEEIEEVDE 952


>Z97055 Human DNA sequence from PAC 388M5 on chromosome 22.
        Length = 177,568

  Minus Strand HSPs:

 Score = 137 (48.2 bits), Expect = 6.9e-06, P = 6.9e-06
 Identities = 28/72 (38%), Positives = 49/72 (68%), Frame = -3

Query:    140 KQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEE 199
              K+  E++  + K+K E+     R + +    ++   +  + +KKKEEEE+EE+EE+EEEE
Sbjct: 166970 KKKEEERRRRRKKKEEEGRRRRRRRRRRRRRRR---RRRRRRKKKEEEEEEEEEEEEEEE 166800

Query:    200 EDEEDEDEEEDD 211
              E+EE+E+EEE++
Sbjct: 166799 EEEEEEEEEEEE 166764

 Score = 135 (47.5 bits), Expect = 1.2e-05, P = 1.2e-05
 Identities = 25/68 (36%), Positives = 47/68 (69%), Frame = -3

Query:    144 EKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEE 203
              +K+  + + + +K+    R + +    ++   +  + +KKKEEEE+EE+EE+EEEEE+EE
Sbjct: 166967 KKEEERRRRRKKKEEEGRRRRRRRRRRRRRRRRRRRRRKKKEEEEEEEEEEEEEEEEEEE 166788

Query:    204 DEDEEEDD 211
              +E+EEE++
Sbjct: 166787 EEEEEEEE 166764

 Score = 128 (45.1 bits), Expect = 8.8e-05, P = 8.8e-05
 Identities = 24/69 (34%), Positives = 47/69 (68%), Frame = -3

Query:    144 EKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEE 203
              +KK  + + + +K     R + +    ++   +  + ++KK+EEE+EE+EE+EEEEE+EE
Sbjct: 166970 KKKEEERRRRRKKKEEEGRRRRRRRRRRRRRRRRRRRRRKKKEEEEEEEEEEEEEEEEEE 166791

Query:    204 DEDEEEDDD 212
              +E+EEE+++
Sbjct: 166790 EEEEEEEEE 166764

 Score = 114 (40.1 bits), Expect = 0.0040, P = 0.0040
 Identities = 28/68 (41%), Positives = 46/68 (67%), Frame = -1

Query:    140 KQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEE 199
              K P E++  + KEK E+     R + K    KK   + E+ +++K++EE+EE+EE+EEEE
Sbjct: 167026 KTPSEEEERRKKEKEEE-----RRRRKK---KK---EEEEGRRRKKKEEEEEEEEEEEEE 166880

Query:    200 EDEEDEDE 207
              E+EE+E+E
Sbjct: 166879 EEEEEEEE 166856

 Score = 113 (39.8 bits), Expect = 0.0051, P = 0.0051
 Identities = 20/36 (55%), Positives = 30/36 (83%), Frame = -1

Query:    179 KSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
              + KKKKEEEE    ++ EEEEE+EE+E+EEE++++E
Sbjct: 166969 RRKKKKEEEEGRRRKKKEEEEEEEEEEEEEEEEEEE 166862

 Score = 113 (39.8 bits), Expect = 0.0051, P = 0.0051
 Identities = 27/87 (31%), Positives = 50/87 (57%), Frame = -3

Query:    126 KKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKE 185
              KK GE        +++   ++  K +E   +     R + +    ++   K E+ ++++E
Sbjct: 167000 KKEGERRRKKKKKEEERRRRRKKKEEEGRRRRRRRRRRRRRRRRRRRRRKKKEEEEEEEE 166821

Query:    186 EEEDEEDEEDEEEEEDEED--EDEEED 210
              EEE+EE+EE+EEEEE+EE+  E+EE +
Sbjct: 166820 EEEEEEEEEEEEEEEEEEEVVEEEERN 166740

 Score = 111 (39.1 bits), Expect = 0.0088, P = 0.0088
 Identities = 21/38 (55%), Positives = 32/38 (84%), Frame = -1

Query:    179 KSKKKKEEEEDE--EDEEDEEEEEDEEDEDEEEDDDDE 214
              + KKKKEEEE    + +E+EEEEE+EE+E+EEE++++E
Sbjct: 166969 RRKKKKEEEEGRRRKKKEEEEEEEEEEEEEEEEEEEEE 166856


>L21696 Human (clone pHG5) prothymosin alpha gene, complete cds.
        Length = 333

  Plus Strand HSPs:

 Score = 120 (42.2 bits), Expect = 7.2e-06, P = 7.2e-06
 Identities = 26/64 (40%), Positives = 36/64 (56%), Frame = +1

Query:   151 KEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEED 210
             K+  EK      A+   DA   G    E  +++ + E DEE+EE  EEEE+EE+ D EE+
Sbjct:    43 KDLQEKKEVVEEAENGRDAPANGNANEENGEQEADSEVDEEEEEGGEEEEEEEEGDGEEE 222

Query:   211 DDDE 214
             D DE
Sbjct:   223 DGDE 234

 Score = 105 (37.0 bits), Expect = 0.00039, P = 0.00039
 Identities = 26/69 (37%), Positives = 39/69 (56%), Frame = +1

Query:   151 KEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEE--DEEEEEDE---EDE 205
             K+  EK      A+   DA   G    E  +++ + E DEE+EE  +EEEEE+E   E+E
Sbjct:    43 KDLQEKKEVVEEAENGRDAPANGNANEENGEQEADSEVDEEEEEGGEEEEEEEEGDGEEE 222

Query:   206 DEEEDDDDE 214
             D +ED++ E
Sbjct:   223 DGDEDEEAE 249

 Score = 90 (31.7 bits), Expect = 0.019, P = 0.019
 Identities = 24/83 (28%), Positives = 44/83 (53%), Frame = +1

Query:   140 KQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEE 199
             K   EKK    + +  +D  A     + +  ++   + ++ +++  EEE+EE+E D EEE
Sbjct:    43 KDLQEKKEVVEEAENGRDAPANGNANEENGEQEADSEVDEEEEEGGEEEEEEEEGDGEEE 222

Query:   200 EDEEDEDEE--------EDDDDE 214
             + +EDE+ E        EDD+D+
Sbjct:   223 DGDEDEEAESATGKRAAEDDEDD 291

 Score = 85 (29.9 bits), Expect = 0.070, P = 0.068
 Identities = 25/84 (29%), Positives = 44/84 (52%), Frame = +1

Query:   140 KQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEE 199
             K   EKK    + +  +D  A     + +  ++   + ++ +++  EEE+EE+E D EEE
Sbjct:    43 KDLQEKKEVVEEAENGRDAPANGNANEENGEQEADSEVDEEEEEGGEEEEEEEEGDGEEE 222

Query:   200 EDEEDEDEE--------EDD-DDE 214
             + +EDE+ E        EDD DD+
Sbjct:   223 DGDEDEEAESATGKRAAEDDEDDD 294

 Score = 80 (28.2 bits), Expect = 0.51, P = 0.40
 Identities = 23/62 (37%), Positives = 36/62 (58%), Frame = +1

Query:   160 AYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDE---------DEEED 210
             A    G+ +A  + V + E+   ++EEEE+E D E+E+ +EDEE E         D+E+D
Sbjct:   115 ANEENGEQEADSE-VDEEEEEGGEEEEEEEEGDGEEEDGDEDEEAESATGKRAAEDDEDD 291

Query:   211 DDD 213
             D D
Sbjct:   292 DVD 300


>U93275 Mus musculus glucokinase gene, 5' flanking region.
        Length = 2623

  Plus Strand HSPs:

 Score = 136 (47.9 bits), Expect = 7.2e-06, P = 7.2e-06
 Identities = 24/37 (64%), Positives = 34/37 (91%), Frame = +1

Query:   178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             +K KK+KEEEE+EE+EE EEEEE EE+E+EEE++++E
Sbjct:   892 KKKKKEKEEEEEEEEEEGEEEEEKEEEEEEEEEEEEE 1002

 Score = 131 (46.1 bits), Expect = 3.0e-05, P = 3.0e-05
 Identities = 22/39 (56%), Positives = 36/39 (92%), Frame = +1

Query:   176 KAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             K +K K+++EEEE+EE EE+EE+EE+EE+E+EEE++++E
Sbjct:   895 KKKKEKEEEEEEEEEEGEEEEEKEEEEEEEEEEEEEEEE 1011

 Score = 130 (45.8 bits), Expect = 4.0e-05, P = 4.0e-05
 Identities = 22/36 (61%), Positives = 34/36 (94%), Frame = +1

Query:   179 KSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             K KKKKE+EE+EE+EE+E EEE+E++E+EEE++++E
Sbjct:   889 KKKKKKEKEEEEEEEEEEGEEEEEKEEEEEEEEEEE 996

 Score = 123 (43.3 bits), Expect = 0.00028, P = 0.00028
 Identities = 20/39 (51%), Positives = 36/39 (92%), Frame = +1

Query:   176 KAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             K EK ++++EEEE+ E+EE++EEEE+EE+E+EEE+++++
Sbjct:   901 KKEKEEEEEEEEEEGEEEEEKEEEEEEEEEEEEEEEEEK 1017

 Score = 122 (42.9 bits), Expect = 0.00037, P = 0.00037
 Identities = 24/44 (54%), Positives = 36/44 (81%), Frame = +1

Query:   171 KKGVVKAEKSKKKKEE-EEDEEDEEDEEEEEDEEDEDEEEDDDD 213
             KK   K E+ ++++EE EE+EE EE+EEEEE+EE+E+EEE ++D
Sbjct:   895 KKKKEKEEEEEEEEEEGEEEEEKEEEEEEEEEEEEEEEEEKEED 1026

 Score = 118 (41.5 bits), Expect = 0.0011, P = 0.0011
 Identities = 23/48 (47%), Positives = 36/48 (75%), Frame = +1

Query:   162 RAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEE 209
             + K K +  ++   + E+ ++K+EEEE+EE+EE+EEEEE EED +EEE
Sbjct:   898 KKKEKEEEEEEEEEEGEEEEEKEEEEEEEEEEEEEEEEEKEED*EEEE 1041

 Score = 110 (38.7 bits), Expect = 0.0095, P = 0.0094
 Identities = 23/53 (43%), Positives = 38/53 (71%), Frame = +1

Query:   162 RAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             + K K +  ++   + E+ ++K+EEEE+EE+EE+EEEEE EED +EEE  + +
Sbjct:   898 KKKEKEEEEEEEEEEGEEEEEKEEEEEEEEEEEEEEEEEKEED*EEEEKKE-K 1053

 Score = 107 (37.7 bits), Expect = 0.021, P = 0.021
 Identities = 24/51 (47%), Positives = 37/51 (72%), Frame = +1

Query:   162 RAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEED-EDEE--E 209
             + K K +  ++   + E+ ++K+EEEE+EE+EE+EEEEE EED E+EE  E
Sbjct:   898 KKKEKEEEEEEEEEEGEEEEEKEEEEEEEEEEEEEEEEEKEED*EEEEKKE 1050


>U52064 Kaposi's sarcoma-associated herpes-like virus ORF73 homolog gene,
        Length = 3489

  Plus Strand HSPs:

 Score = 136 (47.9 bits), Expect = 7.7e-06, P = 7.7e-06
 Identities = 30/97 (30%), Positives = 58/97 (59%), Frame = +1

Query:   119 LSIGDVAKKLGEMWNNTAADDK-QPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKA 177
             +SIG  +   G   ++TA         ++A+K +++  ++  A    G  + +K+  V  
Sbjct:   790 ISIGSSSPSEGSWGDDTAMLVLLAEIAEEASKNEKECSENNQAGEDNGDNEISKESQVDK 969

Query:   178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             + +  K +EEE E DEEDEE++E++++ED+EEDD+++
Sbjct:   970 DDNDNKDDEEEQETDEEDEEDDEEDDEEDDEEDDEED 1080

 Score = 134 (47.2 bits), Expect = 1.4e-05, P = 1.4e-05
 Identities = 27/82 (32%), Positives = 48/82 (58%), Frame = +1

Query:   133 NNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEED 192
             +N   DD++  E      ++  E D        + D  +      E+  ++ +EE+DEED
Sbjct:   973 DNDNKDDEEEQETDEEDEEDDEEDDEEDDEEDDEEDDEEDDEEDDEEDDEEDDEEDDEED 1152

Query:   193 EEDEEEEEDEEDEDEEEDDDDE 214
             +E+E+EEEDEE+++EEED++D+
Sbjct:  1153 DEEEDEEEDEEEDEEEEDEEDD 1218

 Score = 132 (46.5 bits), Expect = 2.5e-05, P = 2.5e-05
 Identities = 21/37 (56%), Positives = 34/37 (91%), Frame = +1

Query:   178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             E+  ++ +EE+DEE++E+E+EEEDEE+EDEE+DDD++
Sbjct:  1120 EEDDEEDDEEDDEEEDEEEDEEEDEEEEDEEDDDDED 1230

 Score = 132 (46.5 bits), Expect = 2.5e-05, P = 2.5e-05
 Identities = 30/85 (35%), Positives = 48/85 (56%), Frame = +1

Query:   133 NNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEED 192
             +N   DD++  E      ++  E D        + D  +      E+  ++ +EE+DEED
Sbjct:   973 DNDNKDDEEEQETDEEDEEDDEEDDEEDDEEDDEEDDEEDDEEDDEEDDEEDDEEDDEED 1152

Query:   193 EEDEEEEEDEEDEDEEED---DDDE 214
             +E+E+EEEDEE+++EEED   DDDE
Sbjct:  1153 DEEEDEEEDEEEDEEEEDEEDDDDE 1227

 Score = 132 (46.5 bits), Expect = 2.5e-05, P = 2.5e-05
 Identities = 25/87 (28%), Positives = 55/87 (63%), Frame = +1

Query:   128 LGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEE 187
             L E+    + ++K+  E   A  ++  + +I+      K D   K   + +++ ++ EE+
Sbjct:   856 LAEIAEEASKNEKECSENNQAG-EDNGDNEISKESQVDKDDNDNKDDEEEQETDEEDEED 1032

Query:   188 EDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             ++E+DEED+EE+++E+DE+++E+DD+E
Sbjct:  1033 DEEDDEEDDEEDDEEDDEEDDEEDDEE 1113

 Score = 129 (45.4 bits), Expect = 5.7e-05, P = 5.7e-05
 Identities = 20/37 (54%), Positives = 34/37 (91%), Frame = +1

Query:   178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             E+  ++++EEEDEE++E+EE+EED++DED E+++DDE
Sbjct:  1144 EEDDEEEDEEEDEEEDEEEEDEEDDDDEDNEDEEDDE 1254

 Score = 128 (45.1 bits), Expect = 7.5e-05, P = 7.5e-05
 Identities = 21/37 (56%), Positives = 33/37 (89%), Frame = +1

Query:   178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             E  ++  EEE++EEDEE++EEEEDEED+D+E+++D+E
Sbjct:  1135 EDDEEDDEEEDEEEDEEEDEEEEDEEDDDDEDNEDEE 1245

 Score = 125 (44.0 bits), Expect = 0.00017, P = 0.00017
 Identities = 21/38 (55%), Positives = 35/38 (92%), Frame = +1

Query:   178 EKSKKKKEEEEDEEDEEDEEEEEDEEDED-EEEDDDDE 214
             E+  ++++EEEDEE++E+EE+EED++DED E+E+DD+E
Sbjct:  1144 EEDDEEEDEEEDEEEDEEEEDEEDDDDEDNEDEEDDEE 1257

 Score = 120 (42.2 bits), Expect = 0.00068, P = 0.00068
 Identities = 21/38 (55%), Positives = 34/38 (89%), Frame = +1

Query:   178 EKSKKKKEEEEDEEDEEDE--EEEEDEEDEDEEEDDDD 213
             E+ +++ EEEEDEED++DE  E+EED+E+ED++ED++D
Sbjct:  1171 EEDEEEDEEEEDEEDDDDEDNEDEEDDEEEDKKEDEED 1284

 Score = 116 (40.8 bits), Expect = 0.0020, P = 0.0020
 Identities = 16/37 (43%), Positives = 35/37 (94%), Frame = +1

Query:   178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             ++ + ++E+EE++E+EEDEE+++DE++EDEE+D++++
Sbjct:  1153 DEEEDEEEDEEEDEEEEDEEDDDDEDNEDEEDDEEED 1263

 Score = 114 (40.1 bits), Expect = 0.0034, P = 0.0034
 Identities = 18/37 (48%), Positives = 32/37 (86%), Frame = +1

Query:   178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             E  ++ +EE+E+EEDEED+++E++E++ED+EE+D  E
Sbjct:  1162 EDEEEDEEEDEEEEDEEDDDDEDNEDEEDDEEEDKKE 1272

 Score = 107 (37.7 bits), Expect = 0.022, P = 0.022
 Identities = 21/41 (51%), Positives = 34/41 (82%), Frame = +1

Query:   178 EKSKKKKEEEEDEEDEEDE--EEEEDEEDEDEEEDDDD--- 213
             E+ +++ EEEEDEED++DE  E+EED+E+ED++ED++D   
Sbjct:  1171 EEDEEEDEEEEDEEDDDDEDNEDEEDDEEEDKKEDEEDGGD 1293

 Score = 106 (37.3 bits), Expect = 0.029, P = 0.029
 Identities = 15/77 (19%), Positives = 51/77 (66%), Frame = +1

Query:   138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197
             D++Q  E++  + ++  ++     + + + D  ++   + ++ ++ ++E++DE++++DE+
Sbjct:  1957 DEQQQDEQQQDEQQQDEQQQDEQQQDEQQQDEQQQDEQQQDEQQQDEQEQQDEQEQQDEQ 2136

Query:   198 EEEDEEDEDEEEDDDDE 214
             E++DE+ +DE++  D++
Sbjct:  2137 EQQDEQQQDEQQQQDEQ 2187

 Score = 94 (33.1 bits), Expect = 0.68, P = 0.49
 Identities = 15/85 (17%), Positives = 51/85 (60%), Frame = +1

Query:   130 EMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEED 189
             E   +    D+Q  + +  +  E+ ++D      + + D  ++   + ++ ++++++E+ 
Sbjct:  2065 EQQQDEQQQDEQEQQDEQEQQDEQEQQDEQQQDEQQQQDEQQQQDEQQQQDEQQQQDEQQ 2244

Query:   190 EEDEEDEEEEEDEEDEDEEEDDDDE 214
             ++DE++++EE+++++E E+E ++ E
Sbjct:  2245 QQDEQEQQEEQEQQEEQEQELEEQE 2319

 Score = 93 (32.7 bits), Expect = 0.88, P = 0.58
 Identities = 14/77 (18%), Positives = 51/77 (66%), Frame = +1

Query:   138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197
             D++Q  E++  + ++  ++     + + + D  ++   + ++ +++ E+++DE++++DE+
Sbjct:  1942 DEQQQDEQQQDEQQQDEQQQDEQQQDEQQQDEQQQDEQQQDE-QQQDEQQQDEQEQQDEQ 2118

Query:   198 EEEDEEDEDEEEDDDDE 214
             E++DE+++ +E+  D++
Sbjct:  2119 EQQDEQEQQDEQQQDEQ 2169

 Score = 92 (32.4 bits), Expect = 1.1, P = 0.68
 Identities = 14/77 (18%), Positives = 49/77 (63%), Frame = +1

Query:   138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197
             D++Q  E++  + +++ E++    + +       +   + E+ ++ +++++DE+ ++DE+
Sbjct:  2062 DEQQQDEQQQDEQEQQDEQEQQDEQEQQDEQQQDEQQQQDEQQQQDEQQQQDEQQQQDEQ 2241

Query:   198 EEEDEEDEDEEEDDDDE 214
             +++DE+++ EE++  +E
Sbjct:  2242 QQQDEQEQQEEQEQQEE 2292

 Score = 87 (30.6 bits), Expect = 4.2, P = 0.99
 Identities = 10/37 (27%), Positives = 29/37 (78%), Frame = +1

Query:   178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             ++ +++ E+++DE+ ++DE++++DE+ + +E+   DE
Sbjct:  2128 DEQEQQDEQQQDEQQQQDEQQQQDEQQQQDEQQQQDE 2238

 Score = 86 (30.3 bits), Expect = 5.4, P = 1.0
 Identities = 20/77 (25%), Positives = 44/77 (57%), Frame = +1

Query:   139 DKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEE-EDEEDEEDEE 197
             D+Q  + +  +  E+ ++D    + + +    ++   + E+  +++E+E ED+E E +E+
Sbjct:  2179 DEQQQQDEQQQQDEQQQQDEQQQQDEQEQQEEQEQQEEQEQELEEQEQELEDQEQELEEQ 2358

Query:   198 EEEDEEDEDEEEDDDDE 214
             E+E EE E E E+ + E
Sbjct:  2359 EQELEEQEQELEEQEQE 2409


>U08110 Mus musculus RNA1 homolog (Fug1) mRNA, complete cds.
        Length = 2981

  Plus Strand HSPs:

 Score = 125 (44.0 bits), Expect = 8.4e-06, Sum P(2) = 8.4e-06
 Identities = 21/37 (56%), Positives = 32/37 (86%), Frame = +2

Query:   178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             ++ + + EEEE EED+E+EE+EEDEED+DEEE++ +E
Sbjct:  1352 DEGEDEDEEEEGEEDDEEEEDEEDEEDDDEEEEEQEE 1462

 Score = 117 (41.2 bits), Expect = 8.7e-05, Sum P(2) = 8.7e-05
 Identities = 18/39 (46%), Positives = 34/39 (87%), Frame = +2

Query:   176 KAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             + E   +++E EED+E+EEDEE+EED+++E+EE+++++E
Sbjct:  1355 EGEDEDEEEEGEEDDEEEEDEEDEEDDDEEEEEQEEEEE 1471

 Score = 113 (39.8 bits), Expect = 0.00027, Sum P(2) = 0.00027
 Identities = 20/41 (48%), Positives = 31/41 (75%), Frame = +2

Query:   174 VVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             + K   S    E E+++E+EE EE++E+EEDE++EEDDD+E
Sbjct:  1322 MAKVLASLSDDEGEDEDEEEEGEEDDEEEEDEEDEEDDDEE 1444

 Score = 111 (39.1 bits), Expect = 0.00047, Sum P(2) = 0.00047
 Identities = 19/31 (61%), Positives = 28/31 (90%), Frame = +2

Query:   178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEE 208
             E+ ++  EEEEDEEDEED++EEE+E++E+EE
Sbjct:  1379 EEGEEDDEEEEDEEDEEDDDEEEEEQEEEEE 1471

 Score = 52 (18.3 bits), Expect = 8.4e-06, Sum P(2) = 8.4e-06
 Identities = 25/94 (26%), Positives = 38/94 (40%), Frame = +2

Query:   103 LFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKL----------KE 152
             LFC  YRP  +     ++  D+AK    +     A  +  ++ K  KL          KE
Sbjct:   227 LFCFVYRPAGEPATAAMASEDIAKLAETLAKTQVAGGQLSFKGKGLKLNTAEDAKDVIKE 406

Query:   153 KYEKD-IAAYRAKGKPDAAKKGVVKAEKSKKKKE 185
               E D + A R +G     +   V A+  +KK E
Sbjct:   407 IEEFDGLEALRLEGNTVGVEAARVIAKALEKKSE 508


>D38613 Mouse 921-L mRNA for presynaptic protein, complete cds.
        Length = 1080

  Plus Strand HSPs:

 Score = 122 (42.9 bits), Expect = 8.8e-06, Sum P(2) = 8.8e-06
 Identities = 23/47 (48%), Positives = 36/47 (76%), Frame = +3

Query:   164 KGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEED 210
             +G+ +   +G  + E   + +EEEE+EE+EE+EEEEE+EE+E+EEED
Sbjct:   900 EGEGEGEGEGEGEGEGEGEGEEEEEEEEEEEEEEEEEEEEEEEEEED 1040

 Score = 115 (40.5 bits), Expect = 0.0017, P = 0.0017
 Identities = 22/51 (43%), Positives = 39/51 (76%), Frame = +3

Query:   164 KGKPDAAKKGVVKAE-KSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDD 213
             +G+ +   +G  + E + + + E EE+EE+EE+EEEEE+EE+E+EEE+++D
Sbjct:   888 EGEGEGEGEGEGEGEGEGEGEGEGEEEEEEEEEEEEEEEEEEEEEEEEEED 1040

 Score = 113 (39.8 bits), Expect = 0.0030, P = 0.0029
 Identities = 31/99 (31%), Positives = 58/99 (58%), Frame = +1

Query:   117 PGLSI---GDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKG 173
             PG  +     VA K  E       ++++  E++  K KEK EK+    + K K    +K 
Sbjct:   664 PGFLVLFHSQVA*KRKEEEEEEEEEEEEEEEEEEEKEKEK-EKEKEKEKEKEKEKEKEKE 840

Query:   174 VVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
               K EK K+K++E+E E+++E E+E+E E+++++E++ + E
Sbjct:   841 KEK-EKEKEKEKEKEKEKEKEKEKEKEKEKEKEKEKEKEKE 960

 Score = 112 (39.4 bits), Expect = 0.0039, P = 0.0039
 Identities = 21/51 (41%), Positives = 37/51 (72%), Frame = +3

Query:   164 KGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             +G+ +   +G  + E   + + E E EE+EE+EEEEE+EE+E+EEE++++E
Sbjct:   882 EGEGEGEGEGEGEGEGEGEGEGEGEGEEEEEEEEEEEEEEEEEEEEEEEEE 1034

 Score = 111 (39.1 bits), Expect = 0.0051, P = 0.0051
 Identities = 24/72 (33%), Positives = 48/72 (66%), Frame = +1

Query:   138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197
             ++++  EK+  K KEK EK+    + K K    +K   K ++ +K+KE+E+++E E+++E
Sbjct:   748 EEEEEEEKEKEKEKEK-EKEKEKEKEKEKEKEKEKEKEKEKEKEKEKEKEKEKEKEKEKE 924

Query:   198 EEEDEEDEDEEE 209
             +E+++E E E+E
Sbjct:   925 KEKEKEKEKEKE 960

 Score = 109 (38.4 bits), Expect = 0.0088, P = 0.0088
 Identities = 21/52 (40%), Positives = 39/52 (75%), Frame = +3

Query:   164 KGKPDAAKKGVVKAE-KSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             +G+ +   +G  + E + + + E E +EE+EE+EEEEE+EE+E+EEE++++E
Sbjct:   882 EGEGEGEGEGEGEGEGEGEGEGEGEGEEEEEEEEEEEEEEEEEEEEEEEEEE 1037

 Score = 107 (37.7 bits), Expect = 0.015, P = 0.015
 Identities = 25/72 (34%), Positives = 48/72 (66%), Frame = +1

Query:   138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197
             ++++  EK+  K KEK EK+    + K K    +K   K EK K+K++E+E E+++E E+
Sbjct:   754 EEEEEKEKEKEKEKEK-EKEKEKEKEKEKEKEKEKEKEK-EKEKEKEKEKEKEKEKEKEK 927

Query:   198 EEEDEEDEDEEE 209
             E+E E+++++E+
Sbjct:   928 EKEKEKEKEKEK 963

 Score = 105 (37.0 bits), Expect = 0.026, P = 0.026
 Identities = 18/34 (52%), Positives = 30/34 (88%), Frame = +1

Query:   181 KKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             +K++EEEE+EE+EE+EEEEE++E E E+E + ++
Sbjct:   706 RKEEEEEEEEEEEEEEEEEEEKEKEKEKEKEKEK 807

 Score = 101 (35.6 bits), Expect = 0.077, P = 0.074
 Identities = 37/119 (31%), Positives = 64/119 (53%), Frame = +1

Query:    91 PNA-PKRP--PSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKA 147
             P+A P RP  P    LF S+   K K E       +  ++  E       + ++  EK+ 
Sbjct:   634 PSAVPDRPFIPGFLVLFHSQVA*KRKEEE------EEEEEEEEEEEEEEEEKEKEKEKEK 795

Query:   148 AKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDE 207
              K KEK EK+    + K K    +K   K EK K+K++E+E E+++E E+E+E E+++ +
Sbjct:   796 EKEKEK-EKEKEKEKEKEKEKEKEKEKEK-EKEKEKEKEKEKEKEKEKEKEKEKEKEKKK 969

Query:   208 EE 209
             ++
Sbjct:   970 KK 975

 Score = 100 (35.2 bits), Expect = 0.099, P = 0.095
 Identities = 21/52 (40%), Positives = 36/52 (69%), Frame = +3

Query:   164 KGKPDAAKKGVVKAEKSKKKKEEEEDE-EDEEDEEEEEDEEDEDEEEDDDDE 214
             +G+ +   +G  + E   + + E E E E EE+EEEEE+EE+E+EEE++++E
Sbjct:   870 EGEGEGEGEGEGEGEGEGEGEGEGEGEGEGEEEEEEEEEEEEEEEEEEEEEE 1025

 Score = 99 (34.8 bits), Expect = 0.13, P = 0.12
 Identities = 35/119 (29%), Positives = 63/119 (52%), Frame = +1

Query:    91 PNA-PKRP--PSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKA 147
             P+A P RP  P    LF S+   K K E       +  ++  E       + ++  EK+ 
Sbjct:   634 PSAVPDRPFIPGFLVLFHSQVA*KRKEEEEEEEEEEEEEEEEEEEKEKEKEKEKEKEKEK 813

Query:   148 AKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDE 207
              K KEK EK+    + K K    +K   + EK K+K++E+E E+++E E+E+E ++ + +
Sbjct:   814 EKEKEK-EKEKEKEKEKEKEKEKEK---EKEKEKEKEKEKEKEKEKEKEKEKEKKKKKKK 981

Query:   208 EE 209
             ++
Sbjct:   982 KK 987

 Score = 99 (34.8 bits), Expect = 0.13, P = 0.12
 Identities = 36/119 (30%), Positives = 62/119 (52%), Frame = +1

Query:    91 PNA-PKRP--PSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKA 147
             P+A P RP  P    LF S+   K K E       +  ++  E       + ++  EK+ 
Sbjct:   634 PSAVPDRPFIPGFLVLFHSQVA*KRKEEEEEEEEEEEEEEEEEEEKEKEKEKEKEKEKEK 813

Query:   148 AKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDE 207
              K KEK EK+    + K K    +K     EK K+K++E+E E+++E E+E+E E+ + +
Sbjct:   814 EKEKEK-EKEKEKEKEKEKEKEKEK-----EKEKEKEKEKEKEKEKEKEKEKEKEKKKKK 975

Query:   208 EE 209
             ++
Sbjct:   976 KK 981

 Score = 98 (34.5 bits), Expect = 0.17, P = 0.16
 Identities = 35/120 (29%), Positives = 63/120 (52%), Frame = +1

Query:    91 PNA-PKRP--PSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKA 147
             P+A P RP  P    LF S+   K K E       +  ++  E       + ++  EK+ 
Sbjct:   634 PSAVPDRPFIPGFLVLFHSQVA*KRKEEEEEEEEEEEEEEEEEEEKEKEKEKEKEKEKEK 813

Query:   148 AKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDE 207
              K KEK EK+    + K K    +K   K EK K+K++E+E E+++E E+E++ ++ + +
Sbjct:   814 EKEKEK-EKEKEKEKEKEKEKEKEKEKEK-EKEKEKEKEKEKEKEKEKEKEKKKKKKKKK 987

Query:   208 EE 209
             ++
Sbjct:   988 KK 993

 Score = 48 (16.9 bits), Expect = 8.8e-06, Sum P(2) = 8.8e-06
 Identities = 19/73 (26%), Positives = 33/73 (45%), Frame = +1

Query:    23 REEHKKKHPDASVNFSEFSKKCSERWKTMSA-KEKGKFEDMAKADKARYEREMKTYIPPK 81
             +EE +++  +      E  +K  E+ K     KEK K ++  K  +   E+E K     K
Sbjct:   709 KEEEEEEEEEEEEEEEEEEEKEKEKEKEKEKEKEKEKEKEKEKEKEKEKEKE-KEKEKEK 885

Query:    82 GETKKKFKDPNAPK 95
              + K+K K+    K
Sbjct:   886 EKEKEKEKEKEKEK 927


>U02506 Rattus norvegicus clone 7 polymeric immunoglobulin receptor mRNA,
        Length = 648

  Plus Strand HSPs:

 Score = 130 (45.8 bits), Expect = 8.9e-06, P = 8.9e-06
 Identities = 21/37 (56%), Positives = 36/37 (97%), Frame = +2

Query:   178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             E+ ++++EEEE+EE+EE+EEEEE+EE+E+EEE++++E
Sbjct:   239 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 349

 Score = 125 (44.0 bits), Expect = 4.2e-05, P = 4.2e-05
 Identities = 22/32 (68%), Positives = 31/32 (96%), Frame = +3

Query:   178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEE 209
             E+ ++KKEEEE+EE+EE+EEEEE+EE+E+EEE
Sbjct:   144 EQGEEKKEEEEEEEEEEEEEEEEEEEEEEEEE 239

 Score = 122 (42.9 bits), Expect = 0.00010, P = 0.00010
 Identities = 21/45 (46%), Positives = 38/45 (84%), Frame = +3

Query:   170 AKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             +KK   K E+ +++++ EE +E+EE+EEEEE+EE+E+EEE++++E
Sbjct:   102 SKKQEEKEEQEQEEEQGEEKKEEEEEEEEEEEEEEEEEEEEEEEE 236

 Score = 120 (42.2 bits), Expect = 0.00019, P = 0.00019
 Identities = 23/63 (36%), Positives = 45/63 (71%), Frame = +3

Query:   152 EKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDD 211
             +K+ K I  Y    +P   +  +V  ++ +K+++E+E+E+ EE +EEEE+EE+E+EEE++
Sbjct:    33 QKF-KVILGYLVSVRPAWNQ*ELVSKKQEEKEEQEQEEEQGEEKKEEEEEEEEEEEEEEE 209

Query:   212 DDE 214
             ++E
Sbjct:   210 EEE 218

 Score = 117 (41.2 bits), Expect = 0.00046, P = 0.00046
 Identities = 19/41 (46%), Positives = 36/41 (87%), Frame = +3

Query:   174 VVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             V K ++ K+++E+EE++ +E+ EEEEE+EE+E+EEE++++E
Sbjct:    99 VSKKQEEKEEQEQEEEQGEEKKEEEEEEEEEEEEEEEEEEE 221

 Score = 116 (40.8 bits), Expect = 0.00061, P = 0.00061
 Identities = 22/33 (66%), Positives = 31/33 (93%), Frame = +3

Query:   178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEE- 209
             E+ ++KKEEEE+EE+EE+EEEEE+EE+E+EEE 
Sbjct:   144 EQGEEKKEEEEEEEEEEEEEEEEEEEEEEEEEK 242

 Score = 109 (38.4 bits), Expect = 0.0047, P = 0.0047
 Identities = 21/47 (44%), Positives = 37/47 (78%), Frame = +2

Query:   173 GVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEED-----DDDE 214
             G  + E+ ++++EEEE+EE+EE+EEEEE+EE+E+EEE+     ++ +
Sbjct:   236 GEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEIRRRKEEGQ 376

 Score = 100 (35.2 bits), Expect = 0.059, P = 0.057
 Identities = 22/41 (53%), Positives = 31/41 (75%), Frame = +3

Query:   178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEE--------- 209
             E+ ++KKEEEE+EE+EE+EEEEE+EE+E+EEE         
Sbjct:   144 EQGEEKKEEEEEEEEEEEEEEEEEEEEEEEEEKKKKKKKKK 266

 Score = 98 (34.5 bits), Expect = 0.10, P = 0.098
 Identities = 22/42 (52%), Positives = 31/42 (73%), Frame = +3

Query:   178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEE---------- 209
             E+ ++KKEEEE+EE+EE+EEEEE+EE+E+EEE          
Sbjct:   144 EQGEEKKEEEEEEEEEEEEEEEEEEEEEEEEEKKKKKKKKKK 269

 Score = 96 (33.8 bits), Expect = 0.18, P = 0.16
 Identities = 22/43 (51%), Positives = 31/43 (72%), Frame = +3

Query:   178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEE----------- 209
             E+ ++KKEEEE+EE+EE+EEEEE+EE+E+EEE           
Sbjct:   144 EQGEEKKEEEEEEEEEEEEEEEEEEEEEEEEEKKKKKKKKKKK 272

 Score = 86 (30.3 bits), Expect = 2.8, P = 0.94
 Identities = 22/48 (45%), Positives = 31/48 (64%), Frame = +3

Query:   178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEE---------------- 209
             E+ ++KKEEEE+EE+EE+EEEEE+EE+E+EEE                
Sbjct:   144 EQGEEKKEEEEEEEEEEEEEEEEEEEEEEEEEKKKKKKKKKKKKKKKK 287


>U35323 Mus musculus H2-M alpha chain (H2-Ma) gene, H2-M beta 2 chain
        Length = 53,419

  Plus Strand HSPs:

 Score = 107 (37.7 bits), Expect = 0.052, Sum P(2) = 0.050
 Identities = 25/71 (35%), Positives = 45/71 (63%), Frame = +2

Query:   140 KQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKA-EKSKKKKEEEEDEEDEEDEEE 198
             K+  +KK  K K+K EK     + K K    +K   K  EK K+K++E+E E+++E E+E
Sbjct: 23834 KKKRKKKKKKKKKKKEKKKEXEKEKEKEKEKEKEKEKEKEKEKEKEKEKEKEKEKEKEKE 24013

Query:   199 EEDEEDEDEEE 209
             +E E+++++E+
Sbjct: 24014 KETEKEKEKEK 24046

 Score = 97 (34.1 bits), Expect = 0.72, Sum P(2) = 0.52
 Identities = 19/51 (37%), Positives = 35/51 (68%), Frame = +2

Query:   164 KGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             K K    KK   K +K +KKKE E+++E E+++E+E+++E E E+E + ++
Sbjct: 23828 KKKKKRKKKKKKKKKKKEKKKEXEKEKEKEKEKEKEKEKEKEKEKEKEKEK 23980

 Score = 96 (33.8 bits), Expect = 0.93, Sum P(2) = 0.61
 Identities = 19/51 (37%), Positives = 35/51 (68%), Frame = +2

Query:   164 KGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             K K    KK   K +K KKK+ E+E E+++E E+E+E E+++++E++ + E
Sbjct: 23831 KKKKRKKKKKKKKKKKEKKKEXEKEKEKEKEKEKEKEKEKEKEKEKEKEKE 23983

 Score = 94 (33.1 bits), Expect = 1.6, Sum P(2) = 0.79
 Identities = 24/70 (34%), Positives = 44/70 (62%), Frame = +2

Query:   140 KQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEE 199
             K+  EKK    KEK EK+    + K K    +K   + EK K+K++E+E E+++E E+E+
Sbjct: 23867 KKKKEKKKEXEKEK-EKEKEKEKEKEKEKEKEK---EKEKEKEKEKEKEKEKEKETEKEK 24034

Query:   200 EDEEDEDEEE 209
             E E+ +++++
Sbjct: 24035 EKEKKKEKKK 24064

 Score = 88 (31.0 bits), Expect = 7.2, Sum P(2) = 1.0
 Identities = 24/69 (34%), Positives = 41/69 (59%), Frame = +2

Query:   140 KQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEE 199
             K+  +K+  K KEK EK+    + K K    +K   K EK K+K++E+E E ++E E+E+
Sbjct: 23873 KKEKKKEXEKEKEK-EKEKEKEKEKEKEKEKEKEKEK-EKEKEKEKEKEKETEKEKEKEK 24046

Query:   200 EDEEDEDEE 208
             + E+ +  E
Sbjct: 24047 KKEKKKKTE 24073

 Score = 49 (17.2 bits), Expect = 0.052, Sum P(2) = 0.050
 Identities = 18/48 (37%), Positives = 25/48 (52%), Frame = +2

Query:   100 AFFLFCSEYRPKIK---------GEHPGLSIGDVAKKLGEMWNNTAADDKQ 141
             AFF FC +  P IK         G H G+++G+  KKL  +W    +  KQ
Sbjct:  7790 AFFFFCHKMWP*IKTICAEEEAEGLH-GMNLGNA*KKL--IWLRPPSHGKQ 7933

  Minus Strand HSPs:

 Score = 136 (47.9 bits), Expect = 9.0e-06, P = 9.0e-06
 Identities = 28/51 (54%), Positives = 38/51 (74%), Frame = -3

Query:   167 PDAAKKGVVKAEKSK----KKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDD 213
             P A  KGV     +     KKKEEEE+EE+EE+EEEEE+EE+E+EEE+++D
Sbjct: 43643 PSAGIKGVRHHRPAN**ILKKKEEEEEEEEEEEEEEEEEEEEEEEEEEEED 43491

 Score = 127 (44.7 bits), Expect = 0.00011, P = 0.00011
 Identities = 22/31 (70%), Positives = 31/31 (100%), Frame = -3

Query:   181 KKKKEEEEDEEDEEDEEEEEDEEDEDEEEDD 211
             KK++EEEE+EE+EE+EEEEE+EE+E+EEE+D
Sbjct: 43583 KKEEEEEEEEEEEEEEEEEEEEEEEEEEEED 43491

 Score = 127 (44.7 bits), Expect = 0.00011, P = 0.00011
 Identities = 28/51 (54%), Positives = 38/51 (74%), Frame = -3

Query:   167 PDAAKKGVVKAEKSK----KKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             P A  KGV     +     KKKEEEE+EE+EE+EEEEE+EE+E+EEE+++D 
Sbjct: 43643 PSAGIKGVRHHRPAN**ILKKKEEEEEEEEEEEEEEEEEEEEEEEEEEEED- 43491


>AD000092 Homo sapiens DNA from chromosome 19p13.2 cosmids R31240, R30272 and
          Length = 110,096

  Plus Strand HSPs:

 Score = 136 (47.9 bits), Expect = 9.1e-06, P = 9.1e-06
 Identities = 32/92 (34%), Positives = 55/92 (59%), Frame = +1

Query:   123 DVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKK 182
             DV +  GE W+ +    +       A L+       A  + K K D  ++ + + E+ KK
Sbjct: 90172 DVGRNKGEAWSWS*CRGRAGLAGGKA-LRCVLCLQAAEKQMKDKQDEEQR-LKEEEEDKK 90345

Query:   183 KKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             +KEEEE E+ E+DE+++EDEEDE+++E+D++E
Sbjct: 90346 RKEEEEAEDKEDDEDKDEDEEDEEDKEEDEEE 90441

 Score = 127 (44.7 bits), Expect = 0.00012, P = 0.00012
 Identities = 34/91 (37%), Positives = 55/91 (60%), Frame = +1

Query:   123 DVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKK 182
             DV +  GE W+ +    +       A L+       A  + K K D  ++ + + E+ KK
Sbjct: 90172 DVGRNKGEAWSWS*CRGRAGLAGGKA-LRCVLCLQAAEKQMKDKQDEEQR-LKEEEEDKK 90345

Query:   183 KKEEEE--DEEDEED-EEEEEDEEDEDEEEDDD 212
             +KEEEE  D+ED+ED +E+EEDEED++E+E++D
Sbjct: 90346 RKEEEEAEDKEDDEDKDEDEEDEEDKEEDEEED 90444

 Score = 103 (36.3 bits), Expect = 0.073, P = 0.070
 Identities = 22/63 (34%), Positives = 38/63 (60%), Frame = +1

Query:   152 EKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDD 211
             EK  KD      + K +   K   + E+++ K+++E+ +EDEEDEE++E++E+ED     
Sbjct: 90280 EKQMKDKQDEEQRLKEEEEDKKRKEEEEAEDKEDDEDKDEDEEDEEDKEEDEEEDVPGQA 90459

Query:   212 DDE 214
              DE
Sbjct: 90460 KDE 90468

 Score = 44 (15.5 bits), Expect = 7.5e-05, Sum P(2) = 7.5e-05
 Identities = 10/20 (50%), Positives = 11/20 (55%), Frame = +1

Query:    78 IPPKGETKKKFKDPNAPKRP 97
             +PP G TKK    P AP  P
Sbjct: 21346 VPPAGLTKKGVSSP-APPGP 21402

 Score = 42 (14.8 bits), Expect = 0.00012, Sum P(2) = 0.00012
 Identities = 9/25 (36%), Positives = 16/25 (64%), Frame = +1

Query:   102 FLFCSEYRPKIKGEHPGLSIGDVAK 126
             FL+    RP+ +GE    S+G++A+
Sbjct: 48913 FLYLFY*RPRQQGEEFKTSLGNIAR 48987

 Score = 41 (14.4 bits), Expect = 0.00015, Sum P(2) = 0.00015
 Identities = 7/16 (43%), Positives = 11/16 (68%), Frame = +2

Query:    89 KDPNAPKRPPSAFFLF 104
             K P+ P++  S F+LF
Sbjct: 75728 KSPHKPRKEGSFFYLF 75775

 Score = 40 (14.1 bits), Expect = 0.00019, Sum P(2) = 0.00019
 Identities = 8/19 (42%), Positives = 12/19 (63%), Frame = +1

Query:    84 TKKKFKDPNAPKRPPSAFF 102
             T +K+ +PN P   P +FF
Sbjct: 83455 T*RKW*NPNFPVHSPPSFF 83511


>U75698 Kaposi's sarcoma-associated herpesvirus long unique region, 80
        Length = 137,508

  Minus Strand HSPs:

 Score = 136 (47.9 bits), Expect = 9.1e-06, P = 9.1e-06
 Identities = 30/97 (30%), Positives = 58/97 (59%), Frame = -3

Query:    119 LSIGDVAKKLGEMWNNTAADDK-QPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKA 177
              +SIG  +   G   ++TA         ++A+K +++  ++  A    G  + +K+  V  
Sbjct: 126508 ISIGSSSPSEGSWGDDTAMLVLLAEIAEEASKNEKECSENNQAGEDNGDNEISKESQVDK 126329

Query:    178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
              + +  K +EEE E DEEDEE++E++++ED+EEDD+++
Sbjct: 126328 DDNDNKDDEEEQETDEEDEEDDEEDDEEDDEEDDEED 126218

 Score = 134 (47.2 bits), Expect = 1.6e-05, P = 1.6e-05
 Identities = 27/82 (32%), Positives = 48/82 (58%), Frame = -3

Query:    133 NNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEED 192
              +N   DD++  E      ++  E D        + D  +      E+  ++ +EE+DEED
Sbjct: 126325 DNDNKDDEEEQETDEEDEEDDEEDDEEDDEEDDEEDDEEDDEEDDEEDDEEDDEEDDEED 126146

Query:    193 EEDEEEEEDEEDEDEEEDDDDE 214
              +E+E+EEEDEE+++EEED++D+
Sbjct: 126145 DEEEDEEEDEEEDEEEEDEEDD 126080

 Score = 132 (46.5 bits), Expect = 2.9e-05, P = 2.9e-05
 Identities = 21/37 (56%), Positives = 34/37 (91%), Frame = -3

Query:    178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
              E+  ++ +EE+DEE++E+E+EEEDEE+EDEE+DDD++
Sbjct: 126178 EEDDEEDDEEDDEEEDEEEDEEEDEEEEDEEDDDDED 126068

 Score = 132 (46.5 bits), Expect = 2.9e-05, P = 2.9e-05
 Identities = 30/85 (35%), Positives = 48/85 (56%), Frame = -3

Query:    133 NNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEED 192
              +N   DD++  E      ++  E D        + D  +      E+  ++ +EE+DEED
Sbjct: 126325 DNDNKDDEEEQETDEEDEEDDEEDDEEDDEEDDEEDDEEDDEEDDEEDDEEDDEEDDEED 126146

Query:    193 EEDEEEEEDEEDEDEEED---DDDE 214
              +E+E+EEEDEE+++EEED   DDDE
Sbjct: 126145 DEEEDEEEDEEEDEEEEDEEDDDDE 126071

 Score = 132 (46.5 bits), Expect = 2.9e-05, P = 2.9e-05
 Identities = 25/87 (28%), Positives = 55/87 (63%), Frame = -3

Query:    128 LGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEE 187
              L E+    + ++K+  E   A  ++  + +I+      K D   K   + +++ ++ EE+
Sbjct: 126442 LAEIAEEASKNEKECSENNQAG-EDNGDNEISKESQVDKDDNDNKDDEEEQETDEEDEED 126266

Query:    188 EDEEDEEDEEEEEDEEDEDEEEDDDDE 214
              ++E+DEED+EE+++E+DE+++E+DD+E
Sbjct: 126265 DEEDDEEDDEEDDEEDDEEDDEEDDEE 126185

 Score = 129 (45.4 bits), Expect = 6.7e-05, P = 6.7e-05
 Identities = 20/37 (54%), Positives = 34/37 (91%), Frame = -3

Query:    178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
              E+  ++++EEEDEE++E+EE+EED++DED E+++DDE
Sbjct: 126154 EEDDEEEDEEEDEEEDEEEEDEEDDDDEDNEDEEDDE 126044

 Score = 128 (45.1 bits), Expect = 8.8e-05, P = 8.8e-05
 Identities = 21/37 (56%), Positives = 33/37 (89%), Frame = -3

Query:    178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
              E  ++  EEE++EEDEE++EEEEDEED+D+E+++D+E
Sbjct: 126163 EDDEEDDEEEDEEEDEEEDEEEEDEEDDDDEDNEDEE 126053

 Score = 125 (44.0 bits), Expect = 0.00020, P = 0.00020
 Identities = 21/38 (55%), Positives = 35/38 (92%), Frame = -3

Query:    178 EKSKKKKEEEEDEEDEEDEEEEEDEEDED-EEEDDDDE 214
              E+  ++++EEEDEE++E+EE+EED++DED E+E+DD+E
Sbjct: 126154 EEDDEEEDEEEDEEEDEEEEDEEDDDDEDNEDEEDDEE 126041

 Score = 120 (42.2 bits), Expect = 0.00079, P = 0.00079
 Identities = 21/38 (55%), Positives = 34/38 (89%), Frame = -3

Query:    178 EKSKKKKEEEEDEEDEEDE--EEEEDEEDEDEEEDDDD 213
              E+ +++ EEEEDEED++DE  E+EED+E+ED++ED++D
Sbjct: 126127 EEDEEEDEEEEDEEDDDDEDNEDEEDDEEEDKKEDEED 126014

 Score = 116 (40.8 bits), Expect = 0.0023, P = 0.0023
 Identities = 16/37 (43%), Positives = 35/37 (94%), Frame = -3

Query:    178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
              ++ + ++E+EE++E+EEDEE+++DE++EDEE+D++++
Sbjct: 126145 DEEEDEEEDEEEDEEEEDEEDDDDEDNEDEEDDEEED 126035

 Score = 114 (40.1 bits), Expect = 0.0040, P = 0.0040
 Identities = 18/37 (48%), Positives = 32/37 (86%), Frame = -3

Query:    178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
              E  ++ +EE+E+EEDEED+++E++E++ED+EE+D  E
Sbjct: 126136 EDEEEDEEEDEEEEDEEDDDDEDNEDEEDDEEEDKKE 126026

 Score = 107 (37.7 bits), Expect = 0.025, P = 0.025
 Identities = 21/41 (51%), Positives = 34/41 (82%), Frame = -3

Query:    178 EKSKKKKEEEEDEEDEEDE--EEEEDEEDEDEEEDDDD--- 213
              E+ +++ EEEEDEED++DE  E+EED+E+ED++ED++D   
Sbjct: 126127 EEDEEEDEEEEDEEDDDDEDNEDEEDDEEEDKKEDEEDGGD 126005

 Score = 106 (37.3 bits), Expect = 0.033, P = 0.033
 Identities = 15/77 (19%), Positives = 51/77 (66%), Frame = -3

Query:    138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197
              D++Q  E++  + ++  ++     + + + D  ++   + ++ ++ ++E++DE++++DE+
Sbjct: 125341 DEQQQDEQQQDEQQQDEQQQDEQQQDEQQQDEQQQDEQQQDEQQQDEQEQQDEQEQQDEQ 125162

Query:    198 EEEDEEDEDEEEDDDDE 214
              E++DE+ +DE++  D++
Sbjct: 125161 EQQDEQQQDEQQQQDEQ 125111

 Score = 94 (33.1 bits), Expect = 0.76, P = 0.53
 Identities = 15/85 (17%), Positives = 51/85 (60%), Frame = -3

Query:    130 EMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEED 189
              E   +    D+Q  + +  +  E+ ++D      + + D  ++   + ++ ++++++E+ 
Sbjct: 125233 EQQQDEQQQDEQEQQDEQEQQDEQEQQDEQQQDEQQQQDEQQQQDEQQQQDEQQQQDEQQ 125054

Query:    190 EEDEEDEEEEEDEEDEDEEEDDDDE 214
              ++DE++++EE+++++E E+E ++ E
Sbjct: 125053 QQDEQEQQEEQEQQEEQEQELEEQE 124979

 Score = 93 (32.7 bits), Expect = 0.98, P = 0.63
 Identities = 14/77 (18%), Positives = 51/77 (66%), Frame = -3

Query:    138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197
              D++Q  E++  + ++  ++     + + + D  ++   + ++ +++ E+++DE++++DE+
Sbjct: 125356 DEQQQDEQQQDEQQQDEQQQDEQQQDEQQQDEQQQDEQQQDE-QQQDEQQQDEQEQQDEQ 125180

Query:    198 EEEDEEDEDEEEDDDDE 214
              E++DE+++ +E+  D++
Sbjct: 125179 EQQDEQEQQDEQQQDEQ 125129

 Score = 92 (32.4 bits), Expect = 1.3, P = 0.72
 Identities = 14/77 (18%), Positives = 49/77 (63%), Frame = -3

Query:    138 DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEE 197
              D++Q  E++  + +++ E++    + +       +   + E+ ++ +++++DE+ ++DE+
Sbjct: 125236 DEQQQDEQQQDEQEQQDEQEQQDEQEQQDEQQQDEQQQQDEQQQQDEQQQQDEQQQQDEQ 125057

Query:    198 EEEDEEDEDEEEDDDDE 214
              +++DE+++ EE++  +E
Sbjct: 125056 QQQDEQEQQEEQEQQEE 125006

 Score = 87 (30.6 bits), Expect = 4.7, P = 0.99
 Identities = 17/35 (48%), Positives = 25/35 (71%), Frame = -2

Query:   175 VKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEE 209
             +  ++S  + E +EDEEDE DEEE +D ++EDE E
Sbjct: 68333 ISPDQSSGESEYDEDEEDE-DEEENDDVQEEDEPE 68232

 Score = 87 (30.6 bits), Expect = 4.7, P = 0.99
 Identities = 10/37 (27%), Positives = 29/37 (78%), Frame = -3

Query:    178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
              ++ +++ E+++DE+ ++DE++++DE+ + +E+   DE
Sbjct: 125170 DEQEQQDEQQQDEQQQQDEQQQQDEQQQQDEQQQQDE 125060

 Score = 86 (30.3 bits), Expect = 6.0, P = 1.0
 Identities = 20/77 (25%), Positives = 44/77 (57%), Frame = -3

Query:    139 DKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEE-EDEEDEEDEE 197
              D+Q  + +  +  E+ ++D    + + +    ++   + E+  +++E+E ED+E E +E+
Sbjct: 125119 DEQQQQDEQQQQDEQQQQDEQQQQDEQEQQEEQEQQEEQEQELEEQEQELEDQEQELEEQ 124940

Query:    198 EEEDEEDEDEEEDDDDE 214
              E+E EE E E E+ + E
Sbjct: 124939 EQELEEQEQELEEQEQE 124889


>AC004015 Human BAC clone RG333F24 from 7q11.2-q21, complete sequence.
          Length = 144,239

  Minus Strand HSPs:

 Score = 136 (47.9 bits), Expect = 9.1e-06, P = 9.1e-06
 Identities = 25/60 (41%), Positives = 46/60 (76%), Frame = -2

Query:    155 EKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
              E+D      +G+ +   +G  + E+ ++++EEEE+EE+EE+EEEEE+EE+E+EEE++++E
Sbjct: 113305 EEDSVEEEEEGEGEG--EGEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 113132

 Score = 119 (41.9 bits), Expect = 0.0010, P = 0.0010
 Identities = 21/41 (51%), Positives = 35/41 (85%), Frame = -2

Query:    174 VVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
              V + E+ + + E EE+EE+EE+EEEEE+EE+E+EEE++++E
Sbjct: 113293 VEEEEEGEGEGEGEEEEEEEEEEEEEEEEEEEEEEEEEEEE 113171


>M35983 Rat ID-A element in the S-100 beta-subunit gene.
        Length = 198

  Plus Strand HSPs:

 Score = 121 (42.6 bits), Expect = 9.2e-06, P = 9.2e-06
 Identities = 21/33 (63%), Positives = 31/33 (93%), Frame = +3

Query:   178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEED 210
             +K KKKKE+EE+EE+EE+EEEEE+EE+E+E+ +
Sbjct:    96 KKEKKKKEKEEEEEEEEEEEEEEEEEEEEEKRN 194

 Score = 120 (42.2 bits), Expect = 1.2e-05, P = 1.2e-05
 Identities = 22/30 (73%), Positives = 28/30 (93%), Frame = +3

Query:   176 KAEKSKKKKEEEEDEEDEEDEEEEEDEEDE 205
             K EK KK+KEEEE+EE+EE+EEEEE+EE+E
Sbjct:    96 KKEKKKKEKEEEEEEEEEEEEEEEEEEEEE 185

 Score = 113 (39.8 bits), Expect = 7.9e-05, P = 7.9e-05
 Identities = 19/31 (61%), Positives = 30/31 (96%), Frame = +3

Query:   179 KSKKKKEEEEDEEDEEDEEEEEDEEDEDEEE 209
             + K+KK++E++EE+EE+EEEEE+EE+E+EEE
Sbjct:    93 RKKEKKKKEKEEEEEEEEEEEEEEEEEEEEE 185

 Score = 106 (37.3 bits), Expect = 0.00051, P = 0.00051
 Identities = 17/31 (54%), Positives = 30/31 (96%), Frame = +3

Query:   182 KKKEEEEDEEDEEDEEEEEDEEDEDEEEDDD 212
             +KKE+++ E++EE+EEEEE+EE+E+EEE+++
Sbjct:    93 RKKEKKKKEKEEEEEEEEEEEEEEEEEEEEE 185

 Score = 104 (36.6 bits), Expect = 0.00087, P = 0.00087
 Identities = 16/31 (51%), Positives = 31/31 (100%), Frame = +3

Query:   181 KKKKEEEEDEEDEEDEEEEEDEEDEDEEEDD 211
             +KK+++++++E+EE+EEEEE+EE+E+EEE++
Sbjct:    93 RKKEKKKKEKEEEEEEEEEEEEEEEEEEEEE 185

 Score = 101 (35.6 bits), Expect = 0.0019, P = 0.0019
 Identities = 16/32 (50%), Positives = 30/32 (93%), Frame = +3

Query:   183 KKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             +K+E++ +E EE+EEEEE+EE+E+EEE+++++
Sbjct:    93 RKKEKKKKEKEEEEEEEEEEEEEEEEEEEEEK 188


>L21694 Human (clone pHG3) prothymosin alpha gene, complete cds.
        Length = 330

  Plus Strand HSPs:

 Score = 119 (41.9 bits), Expect = 9.4e-06, P = 9.4e-06
 Identities = 27/65 (41%), Positives = 37/65 (56%), Frame = +1

Query:   151 KEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEED 210
             K+  EK      A+   DA   G    E  +++ + E DEE+EE  EEEE+EE + EEED
Sbjct:    43 KDLQEKKEVVEEAENGRDAPANGNANEENGEQEADNEVDEEEEEGGEEEEEEEGDGEEED 222

Query:   211 -DDDE 214
              D+DE
Sbjct:   223 GDEDE 237

 Score = 106 (37.3 bits), Expect = 0.00030, P = 0.00030
 Identities = 26/68 (38%), Positives = 36/68 (52%), Frame = +1

Query:   151 KEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEED 210
             K+  EK      A+   DA   G    E  +++ + E DEE+EE  EEEE+EE + EEED
Sbjct:    43 KDLQEKKEVVEEAENGRDAPANGNANEENGEQEADNEVDEEEEEGGEEEEEEEGDGEEED 222

Query:   211 DDD----E 214
              D+    E
Sbjct:   223 GDEDEEAE 246

 Score = 82 (28.9 bits), Expect = 0.15, P = 0.14
 Identities = 22/59 (37%), Positives = 35/59 (59%), Frame = +1

Query:   160 AYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDE------EEDDDD 213
             A    G+ +A  +  V  E+ +  +EEEE+E D E+E+ +EDEE E        E+D+DD
Sbjct:   115 ANEENGEQEADNE--VDEEEEEGGEEEEEEEGDGEEEDGDEDEEAETATGKRAAEDDEDD 288

Query:   214 E 214
             +
Sbjct:   289 D 291


>U08273 Rattus norvegicus Wistar polymeric immunoglobulin receptor (PIGR)
        Length = 999

  Plus Strand HSPs:

 Score = 133 (46.8 bits), Expect = 9.8e-06, P = 9.8e-06
 Identities = 21/39 (53%), Positives = 36/39 (92%), Frame = +2

Query:   176 KAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             +  + +++KEEEE+EE+EE+EEEEE+EE+E+EEE++++E
Sbjct:   428 RRRRRRRRKEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 544

 Score = 132 (46.5 bits), Expect = 1.3e-05, P = 1.3e-05
 Identities = 21/39 (53%), Positives = 36/39 (92%), Frame = +2

Query:   176 KAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             +  + ++K+EEEE+EE+EE+EEEEE+EE+E+EEE++++E
Sbjct:   431 RRRRRRRKEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 547

 Score = 131 (46.1 bits), Expect = 1.8e-05, P = 1.8e-05
 Identities = 21/39 (53%), Positives = 36/39 (92%), Frame = +2

Query:   176 KAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             +  + +K++EEEE+EE+EE+EEEEE+EE+E+EEE++++E
Sbjct:   434 RRRRRRKEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 550

 Score = 130 (45.8 bits), Expect = 2.3e-05, P = 2.3e-05
 Identities = 21/39 (53%), Positives = 36/39 (92%), Frame = +2

Query:   176 KAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             +  + K+++EEEE+EE+EE+EEEEE+EE+E+EEE++++E
Sbjct:   437 RRRRRKEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 553

 Score = 127 (44.7 bits), Expect = 5.5e-05, P = 5.5e-05
 Identities = 20/39 (51%), Positives = 36/39 (92%), Frame = +2

Query:   176 KAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             +  + ++++EEEE+EE+EE+EEEEE+EE+E+EEE++++E
Sbjct:   440 RRRRKEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 556

 Score = 126 (44.4 bits), Expect = 7.5e-05, P = 7.5e-05
 Identities = 19/39 (48%), Positives = 36/39 (92%), Frame = +2

Query:   176 KAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             +  + +++++EEE+EE+EE+EEEEE+EE+E+EEE++++E
Sbjct:   425 RRRRRRRRRKEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 541

 Score = 123 (43.3 bits), Expect = 0.00018, P = 0.00017
 Identities = 21/35 (60%), Positives = 33/35 (94%), Frame = +2

Query:   176 KAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEED 210
             K E+ ++++EEEE+EE+EE+EEEEE+EE+E+EEE+
Sbjct:   452 KEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 556

 Score = 117 (41.2 bits), Expect = 0.00093, P = 0.00093
 Identities = 20/32 (62%), Positives = 31/32 (96%), Frame = +2

Query:   178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEE 209
             E+ ++++EEEE+EE+EE+EEEEE+EE+E+EEE
Sbjct:   461 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 556

 Score = 111 (39.1 bits), Expect = 0.0048, P = 0.0048
 Identities = 22/60 (36%), Positives = 42/60 (70%), Frame = +1

Query:   152 EKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDD 211
             +K+ K I  Y    +P   +  +V  ++ +K+++E+E+E+ EE +EEEE+EE+E+EEE++
Sbjct:   262 QKF-KVILGYLVSVRPAWNQ*ELVSKKQEEKEEQEQEEEQGEEKKEEEEEEEEEEEEEEE 438

 Score = 110 (38.7 bits), Expect = 0.0063, P = 0.0063
 Identities = 18/35 (51%), Positives = 32/35 (91%), Frame = +1

Query:   180 SKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             SKK++E+EE E++EE  EE+++EE+E+EEE++++E
Sbjct:   331 SKKQEEKEEQEQEEEQGEEKKEEEEEEEEEEEEEE 435

 Score = 108 (38.0 bits), Expect = 0.011, P = 0.011
 Identities = 22/61 (36%), Positives = 44/61 (72%), Frame = +1

Query:   152 EKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDD 211
             +K+ K I  Y    +P A  +  + ++K ++K+E+E++EE  E+++EEE+EE+E+EEE++
Sbjct:   262 QKF-KVILGYLVSVRP-AWNQ*ELVSKKQEEKEEQEQEEEQGEEKKEEEEEEEEEEEEEE 435

Query:   212 D 212
             +
Sbjct:   436 E 438

 Score = 107 (37.7 bits), Expect = 0.014, P = 0.014
 Identities = 21/46 (45%), Positives = 36/46 (78%), Frame = +2

Query:   176 KAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEED-------DDDE 214
             K E+ ++++EEEE+EE+EE+EEEEE+EE+E+EEE+       ++ +
Sbjct:   452 KEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEIEIRRRKEEGQ 589

 Score = 106 (37.3 bits), Expect = 0.019, P = 0.019
 Identities = 16/36 (44%), Positives = 33/36 (91%), Frame = +1

Query:   179 KSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             K +++KEE+E EE++ +E++EE+EE+E+EEE+++++
Sbjct:   334 KKQEEKEEQEQEEEQGEEKKEEEEEEEEEEEEEEEK 441

 Score = 106 (37.3 bits), Expect = 0.019, P = 0.019
 Identities = 18/37 (48%), Positives = 31/37 (83%), Frame = +1

Query:   178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             E   KK+EE+E++E EE++ EE+ EE+E+EEE++++E
Sbjct:   322 ELVSKKQEEKEEQEQEEEQGEEKKEEEEEEEEEEEEE 432

 Score = 104 (36.6 bits), Expect = 0.033, P = 0.032
 Identities = 18/32 (56%), Positives = 29/32 (90%), Frame = +1

Query:   178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEE 209
             EK ++++EEE+ EE +E+EEEEE+EE+E+EE+
Sbjct:   346 EKEEQEQEEEQGEEKKEEEEEEEEEEEEEEEK 441


>Z69727 S.pombe chromosome I cosmid c4G9.
        Length = 40,915

  Minus Strand HSPs:

 Score = 125 (44.0 bits), Expect = 1.1e-05, Sum P(3) = 1.1e-05
 Identities = 36/124 (29%), Positives = 63/124 (50%), Frame = -3

Query:    54 KEKGKFEDMAKADKARYEREMKTYIPPK--GETKKKFKD-------------PNAPKRPP 98
             K K K ++   A+K R+   ++++ P +   E +++ K+             P+ PK+P 
Sbjct: 22691 KYKNKLQEQFDAEKKRFMETLRSFTPTEIDSENRRRSKEAHSTGSRYYRLRHPDVPKKPS 22512

Query:    99 SAFFLFCSEYR--PKIKGEH--P-GLS-IGDVAKKLGEMWNNTAADDKQPYEKKAAKLKE 152
             SAF LF  E R  PK++ E   P  +S + +  +   + W   A D K+P+  K+  LKE
Sbjct: 22511 SAFILFYKELRNNPKLRQELGIPEAISTLVEETQNASKAWKELAEDKKKPFIDKSKALKE 22332

Query:   153 KYEK 156
             +Y+K
Sbjct: 22331 QYDK 22320

 Score = 85 (29.9 bits), Expect = 0.10, Sum P(3) = 0.096
 Identities = 23/72 (31%), Positives = 38/72 (52%), Frame = -3

Query:     5 PKKPRGKMSSYAFFVQTCREEHKKKH----PDASVNFSEFSKKCSERWKTMSAKEKGKFE 60
             PKKP    S++  F +  R   K +     P+A     E ++  S+ WK ++  +K  F 
Sbjct: 22526 PKKPS---SAFILFYKELRNNPKLRQELGIPEAISTLVEETQNASKAWKELAEDKKKPFI 22356

Query:    61 DMAKADKARYEREMK 75
             D +KA K +Y++ MK
Sbjct: 22355 DKSKALKEQYDKFMK 22311

 Score = 60 (21.1 bits), Expect = 1.1e-05, Sum P(3) = 1.1e-05
 Identities = 15/45 (33%), Positives = 24/45 (53%), Frame = -2

Query:   174 VVKAEKSKKKKEE--EE---DEEDEEDEEEEEDEEDEDEEEDDDD 213
             + K  K++K K    E+   D +DEED+ + +D     E +D DD
Sbjct:  9078 ITKTNKNRKGKGRAIEDLIPDIDDEEDDVDFQDLSSSGESDDSDD 8944

 Score = 60 (21.1 bits), Expect = 1.1e-05, Sum P(3) = 1.1e-05
 Identities = 17/51 (33%), Positives = 27/51 (52%), Frame = -2

Query:   166 KPDAAKKGVVKA-EKSKKKKEEEEDEEDEED--EEEEEDEEDEDEEEDDDD 213
             K +  +KG  +A E      ++EED+ D +D     E D+ D+  +ED DD
Sbjct:  9072 KTNKNRKGKGRAIEDLIPDIDDEEDDVDFQDLSSSGESDDSDDSMQEDYDD 8920

 Score = 57 (20.1 bits), Expect = 0.10, Sum P(3) = 0.096
 Identities = 16/46 (34%), Positives = 24/46 (52%), Frame = -3

Query:   115 EHPGLSIGDVAKKLGEMWNNTAADD--KQPYEKKAAKLKEKYEKDI 158
             E  GL  G+  KK+  ++ +   D   KQP+ K   KLK K  K++
Sbjct: 18599 EKGGLINGETKKKISSIYLDREYDGLMKQPWVKYGTKLKIKEIKEL 18462

 Score = 48 (16.9 bits), Expect = 1.1e-05, Sum P(3) = 1.1e-05
 Identities = 8/23 (34%), Positives = 13/23 (56%), Frame = -2

Query:    36 NFSEFSKKCSERWKTMSAKEKGK 58
             N S+ SK   +RW+    + KG+
Sbjct: 28137 NLSKLSKPSKQRWQKSPVRPKGR 28069

 Score = 47 (16.5 bits), Expect = 0.00021, Sum P(3) = 0.00021
 Identities = 9/15 (60%), Positives = 11/15 (73%), Frame = -1

Query:   198 EEEDEEDEDEEEDDD 212
             EE   ED+ EEED+D
Sbjct:  8752 EEGQNEDDFEEEDED 8708

 Score = 47 (16.5 bits), Expect = 0.00021, Sum P(3) = 0.00021
 Identities = 9/33 (27%), Positives = 21/33 (63%), Frame = -1

Query:   174 VVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDED 206
             ++ + ++++KK +     +E   E++ +EEDED
Sbjct:  8806 IMCSTRTRRKKIDFTKVLEEGQNEDDFEEEDED 8708

 Score = 44 (15.5 bits), Expect = 0.00040, Sum P(3) = 0.00040
 Identities = 7/15 (46%), Positives = 12/15 (80%), Frame = -1

Query:   199 EEDEEDEDEEEDDDD 213
             EE + ++D EE+D+D
Sbjct:  8752 EEGQNEDDFEEEDED 8708

 Score = 43 (15.1 bits), Expect = 0.00050, Sum P(3) = 0.00050
 Identities = 7/15 (46%), Positives = 13/15 (86%), Frame = -1

Query:   197 EEEEDEEDEDEEEDD 211
             EE ++E+D +EE++D
Sbjct:  8752 EEGQNEDDFEEEDED 8708

 Score = 42 (14.8 bits), Expect = 0.00063, Sum P(3) = 0.00063
 Identities = 7/15 (46%), Positives = 12/15 (80%), Frame = -1

Query:   194 EDEEEEEDEEDEDEE 208
             E+ + E+D E+EDE+
Sbjct:  8752 EEGQNEDDFEEEDED 8708

 Score = 40 (14.1 bits), Expect = 0.00099, Sum P(3) = 0.00099
 Identities = 8/15 (53%), Positives = 13/15 (86%), Frame = -1

Query:   197 EEEEDEED-EDEEED 210
             EE ++E+D E+E+ED
Sbjct:  8752 EEGQNEDDFEEEDED 8708


>M60665 Rat prothymosin-alpha mRNA, 5' end.
        Length = 446

  Plus Strand HSPs:

 Score = 117 (41.2 bits), Expect = 1.2e-05, P = 1.2e-05
 Identities = 26/65 (40%), Positives = 37/65 (56%), Frame = +3

Query:   150 LKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEE 209
             LKEK  K++      G+   A       E  +++ + E DEE+EE  EEEE+EE+ D EE
Sbjct:   234 LKEK--KEVVEEAENGRDAPANGNAQNEENGEQEADNEVDEEEEEGGEEEEEEEEGDGEE 407

Query:   210 DDDDE 214
             +D DE
Sbjct:   408 EDGDE 422

 Score = 108 (38.0 bits), Expect = 0.00013, P = 0.00013
 Identities = 27/66 (40%), Positives = 39/66 (59%), Frame = +3

Query:   150 LKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEED-EEEEEDEEDEDEE 208
             LKEK  K++      G+   A       E  +++ + E DEE+EE  EEEEE+EE + EE
Sbjct:   234 LKEK--KEVVEEAENGRDAPANGNAQNEENGEQEADNEVDEEEEEGGEEEEEEEEGDGEE 407

Query:   209 ED--DDDE 214
             ED  +D+E
Sbjct:   408 EDGDEDEE 431

 Score = 98 (34.5 bits), Expect = 0.027, P = 0.027
 Identities = 25/81 (30%), Positives = 42/81 (51%), Frame = +3

Query:   133 NNTAADDKQPYEKKAAKLKEKYEKDIAAYR---AKGKPDAAKKGVVKAEKSKKKKEEEED 189
             ++ A D       K  K K++  ++    R   A G     + G  +A+    ++EEE  
Sbjct:   189 SDAAVDTSSEITTKDLKEKKEVVEEAENGRDAPANGNAQNEENGEQEADNEVDEEEEEGG 368

Query:   190 EEDEEDEEEEEDEEDEDEEED 210
             EE+EE+EE + +EED DE+E+
Sbjct:   369 EEEEEEEEGDGEEEDGDEDEE 431


>U95743 Homo sapiens chromosome 16 BAC clone CIT987-SK65D3, complete
        Length = 192,730

  Plus Strand HSPs:

 Score = 135 (47.5 bits), Expect = 1.2e-05, P = 1.2e-05
 Identities = 28/66 (42%), Positives = 43/66 (65%), Frame = +1

Query:   145 KKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEED 204
             KK  K K K+++     R K K    ++   + EK KKKKEEEE+EE+EE+EE++   +D
Sbjct: 89611 KKKRKNKRKWKRRKRKRRKKRKERKEREEEEEKEKKKKKKEEEEEEEEEEEEEDKNKRKD 89790

Query:   205 EDEEED 210
             ++EEE+
Sbjct: 89791 KEEEEE 89808

 Score = 117 (41.2 bits), Expect = 0.0018, P = 0.0018
 Identities = 25/80 (31%), Positives = 49/80 (61%), Frame = +1

Query:   135 TAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEE 194
             T +  K   EK+  + +E+  +     R K + +  K    K ++ KK+KE +E EE+EE
Sbjct: 89527 TKSKAKTEKEKERERERERERRKRKRERKKKRKNKRKWKRRKRKRRKKRKERKEREEEEE 89706

Query:   195 DEEEEEDEEDEDEEEDDDDE 214
              E++++ +E+E+EEE++++E
Sbjct: 89707 KEKKKKKKEEEEEEEEEEEE 89766

 Score = 117 (41.2 bits), Expect = 0.0018, P = 0.0018
 Identities = 24/80 (30%), Positives = 51/80 (63%), Frame = +1

Query:   135 TAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEE 194
             T  + ++  E++  + K K E+     + K K    ++   + +K K++KE EE+EE E+
Sbjct: 89545 TEKEKERERERERERRKRKRERK---KKRKNKRKWKRRKRKRRKKRKERKEREEEEEKEK 89715

Query:   195 DEEEEEDEEDEDEEEDDDDE 214
              ++++E+EE+E+EEE+++D+
Sbjct: 89716 KKKKKEEEEEEEEEEEEEDK 89775

 Score = 110 (38.7 bits), Expect = 0.011, P = 0.011
 Identities = 21/48 (43%), Positives = 35/48 (72%), Frame = +3

Query:   165 GKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDD 212
             G+ +   +G  + E+ +++ EEEE+EE EE EEEEE+EE+E+E E+ +
Sbjct: 89547 GEGEGEGEGEGEGEEEEEEGEEEEEEEQEEVEEEEEEEEEEEEGEEGE 89690

 Score = 103 (36.3 bits), Expect = 0.073, P = 0.070
 Identities = 19/42 (45%), Positives = 32/42 (76%), Frame = +3

Query:   173 GVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             G  + E   + + EEE+EE EE+EEEE++E +E+EEE++++E
Sbjct: 89547 GEGEGEGEGEGEGEEEEEEGEEEEEEEQEEVEEEEEEEEEEE 89672

 Score = 93 (32.7 bits), Expect = 1.6, Sum P(2) = 0.79
 Identities = 25/83 (30%), Positives = 42/83 (50%), Frame = +2

Query:    132 WNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEE 191
              W  T  D  +  +KK  K K +  K+    R K K    KK   K E+ +K+KE  E  +
Sbjct: 116801 WE-TEQDSVKKKKKKERKRKRERRKEGRGKRKKNKE--RKKERKKKERKRKRKESNEGRK 116971

Query:    192 DEEDEEEEEDEEDEDEEEDDDDE 214
              + E +EEE  ++++ +E++   E
Sbjct: 116972 EGERKEEERKKKEKRKEKEGRKE 117040

 Score = 55 (19.4 bits), Expect = 1.6, Sum P(2) = 0.79
 Identities = 22/81 (27%), Positives = 36/81 (44%), Frame = +2

Query:    24 EEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARYEREMKTYIPPKGE 83
             +E K+   +AS   S+  ++ +ER K    KE+ K  +  K  +   ERE +     K E
Sbjct: 94028 KEMKEMQKEASKQGSKQDRQ-TERRKERKKKERKKERERKKEREKEREREREK--ERKKE 94198

Query:    84 TKKKFKDPNAPKRPPSAFFLF 104
              KK+ K      R  +  F +
Sbjct: 94199 RKKERKKERVQNRLSNRAFCY 94261

 Score = 51 (18.0 bits), Expect = 3.8, Sum P(2) = 0.98
 Identities = 19/71 (26%), Positives = 30/71 (42%), Frame = +1

Query:    23 REEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARYEREMKTYIPPKG 82
             R E   K    +   +  + +  ER K    KE+ + ++  +  K   ERE K     K 
Sbjct: 94030 RNERNAKGSKQTRKQARQTDRKKEREKEERKKERERKKERKRERKRERERERKK--ERKK 94203

Query:    83 ETKKKFKDPNA 93
             E KK+ K P +
Sbjct: 94204 ERKKERKSPKS 94236

 Score = 44 (15.5 bits), Expect = 0.00018, Sum P(2) = 0.00018
 Identities = 7/15 (46%), Positives = 12/15 (80%), Frame = +3

Query:    83 ETKKKFKDPNAPKRP 97
             ETK+ +K+PN  ++P
Sbjct: 35181 ETKRFYKNPNLAQKP 35225

 Score = 41 (14.4 bits), Expect = 0.00036, Sum P(2) = 0.00036
 Identities = 7/9 (77%), Positives = 8/9 (88%), Frame = +1

Query:    96 RPPSAFFLF 104
             RPP+ FFLF
Sbjct: 49384 RPPALFFLF 49410


>X69986 R.norvegicus gene for GABAA receptor delta subunit
        Length = 3500

  Plus Strand HSPs:

 Score = 134 (47.2 bits), Expect = 1.4e-05, P = 1.4e-05
 Identities = 26/58 (44%), Positives = 42/58 (72%), Frame = +1

Query:   155 EKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDD 212
             E++    R + + +  KK   K  K  +K+EEEE+EE+EE+EEEEE+EE+E+EEE+++
Sbjct:   931 EREREREREREREEEGKK---KGRKEGRKEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 1095

 Score = 127 (44.7 bits), Expect = 9.9e-05, P = 9.9e-05
 Identities = 26/59 (44%), Positives = 43/59 (72%), Frame = +1

Query:   155 EKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDD 213
             E++    R + + +  KK   K  K + +KEEEE+EE+EE+EEEEE+EE+E+EEE++++
Sbjct:   931 EREREREREREREEEGKK---KGRK-EGRKEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 1095

 Score = 126 (44.4 bits), Expect = 0.00013, P = 0.00013
 Identities = 24/43 (55%), Positives = 36/43 (83%), Frame = +1

Query:   168 DAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEED 210
             +  KKG  + E  K+++EEEE+EE+EE+EEEEE+EE+E+EEE+
Sbjct:   973 EGKKKG--RKEGRKEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 1095

 Score = 126 (44.4 bits), Expect = 0.00013, P = 0.00013
 Identities = 27/60 (45%), Positives = 42/60 (70%), Frame = +1

Query:   155 EKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             E++    R + + +  KK   K  K  +K+EEEE+EE+EE+EEEEE+EE+E+EEE++  E
Sbjct:   931 EREREREREREREEEGKK---KGRKEGRKEEEEEEEEEEEEEEEEEEEEEEEEEEEE--E 1095

 Score = 93 (32.7 bits), Expect = 0.88, P = 0.58
 Identities = 20/39 (51%), Positives = 29/39 (74%), Frame = +1

Query:   176 KAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             + E+ KKK  +E  +E+EE+EEEEE+EE+E+EEE    E
Sbjct:   964 REEEGKKKGRKEGRKEEEEEEEEEEEEEEEEEEE----E 1068

 Score = 92 (32.4 bits), Expect = 1.1, P = 0.68
 Identities = 17/42 (40%), Positives = 32/42 (76%), Frame = +1

Query:   178 EKSKKKKEEEEDE-----EDEEDEEEEEDEEDEDEEEDDDDE 214
             E+ ++++ EEE +     E  ++EEEEE+EE+E+EEE++++E
Sbjct:   943 EREREREREEEGKKKGRKEGRKEEEEEEEEEEEEEEEEEEEE 1068

 Score = 85 (29.9 bits), Expect = 3.8, Sum P(2) = 0.98
 Identities = 17/32 (53%), Positives = 22/32 (68%), Frame = +3

Query:   176 KAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDE 207
             K EK ++KKEEEE+EED+  EE  E  E  +E
Sbjct:  1176 KKEKKERKKEEEEEEEDDRGEERGERRERGEE 1271

 Score = 84 (29.6 bits), Expect = 5.0, Sum P(2) = 0.99
 Identities = 18/35 (51%), Positives = 23/35 (65%), Frame = +3

Query:   176 KAEKSKKKKEEEEDEEDEEDEEE-EEDEEDEDEEE 209
             K EK ++KKEEEE+EED+  EE  E  E  E+  E
Sbjct:  1176 KKEKKERKKEEEEEEEDDRGEERGERRERGEERGE 1280

 Score = 83 (29.2 bits), Expect = 6.4, Sum P(2) = 1.0
 Identities = 16/34 (47%), Positives = 24/34 (70%), Frame = +3

Query:   176 KAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEE 209
             K +K KK++++EE+EE+E+D  EE  E  E  EE
Sbjct:  1170 KKKKEKKERKKEEEEEEEDDRGEERGERRERGEE 1271

 Score = 44 (15.5 bits), Expect = 3.8, Sum P(2) = 0.98
 Identities = 12/44 (27%), Positives = 22/44 (50%), Frame = +2

Query:    46 ERWKTMSAKEKGKFEDMAKADKARYEREMKTYIPPKGETKKKFK 89
             ER +    +++G+ E   K  K + +++ K     K + KKK K
Sbjct:   959 ERERKKERRKEGRKEGRKKKKKKKKKKKKKKKKKKKKKKKKKKK 1090


>X07453;X66268 Plasmodium falciparum 11-1 gene part 1
            Length = 4630

  Plus Strand HSPs:

 Score = 134 (47.2 bits), Expect = 1.4e-05, P = 1.4e-05
 Identities = 56/200 (28%), Positives = 90/200 (45%), Frame = +2

Query:    25 EHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE-DMAKADKARYEREMK-TYI-PPK 81
             + K +     VN  +  +K   + K  + KEK + E D  K ++ + +RE K +Y+   K
Sbjct:  1127 KRKSRRKKVKVNLKDNLEKREGKMKRRNKKEKRRKEKDNKKMNELKLKREYKESYLLDNK 1306

Query:    82 GET----KKKFKDPNAPKRP--PSA--FFL-FCSEYRPKIKGEHPGLSIGDVAKKLGEMW 132
              +       KF      K    P++  +FL     Y  + KG      I +  ++   + 
Sbjct:  1307 SDMDVIRNDKFSYFTLYKNNLFPNSNNYFLHMLKTYDEENKGIDENTDINENVEENEYVD 1486

Query:   133 NNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEED 192
              NT  D K   E K     E  +   +A  + G      +   K  +  K K+  +D++D
Sbjct:  1487 KNTEGD-KDGVEDKGGGENEGGDGHGSAGDSAGGDRGGDENKDKDNEENKDKKGNKDDDD 1663

Query:   193 EEDEEEEEDEEDEDEEEDDDDE 214
             EE+EEEEED+E E EE+DD DE
Sbjct:  1664 EEEEEEEEDDE-EKEEKDDKDE 1726

 Score = 130 (45.8 bits), Expect = 4.4e-05, P = 4.4e-05
 Identities = 54/203 (26%), Positives = 92/203 (45%), Frame = +2

Query:    25 EHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFE-DMAKADKARYEREMK-TYI-PPK 81
             + K +     VN  +  +K   + K  + KEK + E D  K ++ + +RE K +Y+   K
Sbjct:  1127 KRKSRRKKVKVNLKDNLEKREGKMKRRNKKEKRRKEKDNKKMNELKLKREYKESYLLDNK 1306

Query:    82 GET----KKKFKDPNAPKRP--PSA--FFL-FCSEYRPKIKGEHPGLSIGDVAKKLGEMW 132
              +       KF      K    P++  +FL     Y  + KG      I +  ++   + 
Sbjct:  1307 SDMDVIRNDKFSYFTLYKNNLFPNSNNYFLHMLKTYDEENKGIDENTDINENVEENEYVD 1486

Query:   133 NNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEED 192
              NT  D K   E K     E  +   +A  + G      +   K  +  K K+  +D++D
Sbjct:  1487 KNTEGD-KDGVEDKGGGENEGGDGHGSAGDSAGGDRGGDENKDKDNEENKDKKGNKDDDD 1663

Query:   193 EEDEEEEEDEEDEDEEEDDD--DE 214
             EE+EEEEED+E+++E++D D  DE
Sbjct:  1664 EEEEEEEEDDEEKEEKDDKDEKDE 1735

 Score = 110 (38.7 bits), Expect = 0.010, P = 0.010
 Identities = 17/39 (43%), Positives = 33/39 (84%), Frame = +2

Query:   176 KAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             K +K  K  ++EE+EE+EED+EE+E+++D+DE+++ D++
Sbjct:  1631 KDKKGNKDDDDEEEEEEEEDDEEKEEKDDKDEKDEKDEK 1747

 Score = 110 (38.7 bits), Expect = 0.010, P = 0.010
 Identities = 20/41 (48%), Positives = 33/41 (80%), Frame = +2

Query:   176 KAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDE--EEDDDDE 214
             K +K  K  ++EE+EE+EED+EE+E+++D+DE  E+D+ DE
Sbjct:  1631 KDKKGNKDDDDEEEEEEEEDDEEKEEKDDKDEKDEKDEKDE 1753

 Score = 106 (37.3 bits), Expect = 0.030, P = 0.030
 Identities = 20/41 (48%), Positives = 31/41 (75%), Frame = +2

Query:   176 KAEKSKKKKEEEEDEEDEEDEEEEED--EEDEDEEEDDDDE 214
             K  K    +EEEE+EED+E++EE++D  E+DE +E+D+ DE
Sbjct:  1640 KGNKDDDDEEEEEEEEDDEEKEEKDDKDEKDEKDEKDEKDE 1762

 Score = 93 (32.7 bits), Expect = 0.90, P = 0.59
 Identities = 30/95 (31%), Positives = 53/95 (55%), Frame = +2

Query:   114 GEHPGLSIGDVA--KKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAK 171
             G+  G S GD A   + G+   N   D+++  +KK  K  +  E++      + K +   
Sbjct:  1547 GDGHG-SAGDSAGGDRGGD--ENKDKDNEENKDKKGNKDDDDEEEEEEEEDDEEKEEKDD 1717

Query:   172 KGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEE 208
             K   K EK +K +++E+DE+DE+DE+ E+DE   +E+
Sbjct:  1718 KDE-KDEKDEKDEKDEKDEKDEKDEKGEKDESKGEEK 1825


>D14636 Mouse mRNA for PEBP2a1 protein, complete cds.
        Length = 6518

  Minus Strand HSPs:

 Score = 134 (47.2 bits), Expect = 1.5e-05, P = 1.5e-05
 Identities = 23/44 (52%), Positives = 39/44 (88%), Frame = -1

Query:   171 KKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             +KG  K  + ++++EEEE+EE+EE+EEEEE+EE+E+EEE++++E
Sbjct:  5435 RKGDFKP*EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 5304

 Score = 133 (46.8 bits), Expect = 2.0e-05, P = 2.0e-05
 Identities = 22/36 (61%), Positives = 35/36 (97%), Frame = -1

Query:   178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDD 213
             E+ ++++EEEE+EE+EE+EEEEE+EE+E+EEE++DD
Sbjct:  5348 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEDD 5241

 Score = 133 (46.8 bits), Expect = 2.0e-05, P = 2.0e-05
 Identities = 25/55 (45%), Positives = 44/55 (80%), Frame = -1

Query:   162 RAKG--KPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             + KG  KP   ++   + E+ ++++EEEE+EE+EE+EEEEE+EE+E+EEE++++E
Sbjct:  5438 KRKGDFKP*EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 5274

 Score = 130 (45.8 bits), Expect = 4.6e-05, P = 4.6e-05
 Identities = 21/37 (56%), Positives = 36/37 (97%), Frame = -1

Query:   178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             E+ ++++EEEE+EE+EE+EEEEE+EE+E+EEE++++E
Sbjct:  5381 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 5271

 Score = 130 (45.8 bits), Expect = 4.6e-05, P = 4.6e-05
 Identities = 21/37 (56%), Positives = 36/37 (97%), Frame = -1

Query:   178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             E+ ++++EEEE+EE+EE+EEEEE+EE+E+EEE++++E
Sbjct:  5378 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 5268

 Score = 130 (45.8 bits), Expect = 4.6e-05, P = 4.6e-05
 Identities = 21/37 (56%), Positives = 36/37 (97%), Frame = -1

Query:   178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             E+ ++++EEEE+EE+EE+EEEEE+EE+E+EEE++++E
Sbjct:  5375 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 5265

 Score = 130 (45.8 bits), Expect = 4.6e-05, P = 4.6e-05
 Identities = 21/37 (56%), Positives = 36/37 (97%), Frame = -1

Query:   178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             E+ ++++EEEE+EE+EE+EEEEE+EE+E+EEE++++E
Sbjct:  5372 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 5262

 Score = 130 (45.8 bits), Expect = 4.6e-05, P = 4.6e-05
 Identities = 21/37 (56%), Positives = 36/37 (97%), Frame = -1

Query:   178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             E+ ++++EEEE+EE+EE+EEEEE+EE+E+EEE++++E
Sbjct:  5369 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 5259

 Score = 130 (45.8 bits), Expect = 4.6e-05, P = 4.6e-05
 Identities = 21/37 (56%), Positives = 36/37 (97%), Frame = -1

Query:   178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             E+ ++++EEEE+EE+EE+EEEEE+EE+E+EEE++++E
Sbjct:  5366 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 5256

 Score = 130 (45.8 bits), Expect = 4.6e-05, P = 4.6e-05
 Identities = 21/37 (56%), Positives = 36/37 (97%), Frame = -1

Query:   178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             E+ ++++EEEE+EE+EE+EEEEE+EE+E+EEE++++E
Sbjct:  5363 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 5253

 Score = 130 (45.8 bits), Expect = 4.6e-05, P = 4.6e-05
 Identities = 21/37 (56%), Positives = 36/37 (97%), Frame = -1

Query:   178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             E+ ++++EEEE+EE+EE+EEEEE+EE+E+EEE++++E
Sbjct:  5360 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 5250

 Score = 130 (45.8 bits), Expect = 4.6e-05, P = 4.6e-05
 Identities = 21/37 (56%), Positives = 36/37 (97%), Frame = -1

Query:   178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             E+ ++++EEEE+EE+EE+EEEEE+EE+E+EEE++++E
Sbjct:  5357 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 5247

 Score = 127 (44.7 bits), Expect = 0.00011, P = 0.00011
 Identities = 20/37 (54%), Positives = 36/37 (97%), Frame = -1

Query:   178 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             E+ ++++EEEE+EE+EE+EEEEE+EE+E+EEE+++++
Sbjct:  5354 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEED 5244

 Score = 120 (42.2 bits), Expect = 0.00073, P = 0.00073
 Identities = 20/30 (66%), Positives = 30/30 (100%), Frame = -1

Query:   185 EEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             EEEE+EE+EE+EEEEE+EE+E+EEE++++E
Sbjct:  5411 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 5322


>A42910 Sequence 42 from Patent WO9502701.
        Length = 275

  Plus Strand HSPs:

 Score = 118 (41.5 bits), Expect = 1.5e-05, P = 1.5e-05
 Identities = 21/50 (42%), Positives = 35/50 (70%), Frame = +3

Query:   162 RAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDD 211
             R +G+ +  + G  +  K ++KKE E + E E +EEEEE+EE+E+EEE++
Sbjct:   126 RKEGRKEGRQVGRQEERKKERKKEREREREREREEEEEEEEEEEEEEEEE 275

 Score = 115 (40.5 bits), Expect = 3.4e-05, P = 3.4e-05
 Identities = 24/54 (44%), Positives = 39/54 (72%), Frame = +3

Query:   162 RAKGKPDAAKKG--VVKAEKSKK-KKEEEEDEEDEEDEEEEEDEEDEDEEEDDD 212
             R +G+ +  K+G  V + E+ KK +K+E E E + E EEEEE+EE+E+EEE+++
Sbjct:   114 RKEGRKEGRKEGRQVGRQEERKKERKKEREREREREREEEEEEEEEEEEEEEEE 275

 Score = 106 (37.3 bits), Expect = 0.00036, P = 0.00036
 Identities = 22/50 (44%), Positives = 34/50 (68%), Frame = +3

Query:   162 RAKGKPDAAKKGVVKAEKSKKKKEEE---EDEEDEEDEEEEEDEEDEDEE 208
             R +G+ +  + G  +  K ++KKE E   E E +EE+EEEEE+EE+E+EE
Sbjct:   126 RKEGRKEGRQVGRQEERKKERKKEREREREREREEEEEEEEEEEEEEEEE 275


>AF025664 Bos taurus Na-Ca+K exchanger (BOSNCKX) mRNA, partial cds.
          Length = 1576

  Plus Strand HSPs:

 Score = 126 (44.4 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
 Identities = 29/104 (27%), Positives = 57/104 (54%), Frame = +3

Query:   111 KIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAA 170
             ++KG+   +  G+  +  GE       +D+   +       E  E+++ A   +G+    
Sbjct:   558 EVKGDEGEIQAGEAGEVEGEDGEVEGGEDEGEIQAGEGGEGETGEQELNA-EIQGEAKDD 734

Query:   171 KKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 214
             ++GV           E+E+EEDEE+E+EEE+EE+E+EEE+++++
Sbjct:   735 EEGVDGEGGGDGGDSEDEEEEDEEEEDEEEEEEEEEEEEEENEQ 866

 Score = 44 (15.5 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
 Identities = 17/54 (31%), Positives = 25/54 (46%), Frame = +1

Query:    47 RWKTMSAKEK------GKFEDMAKADKARYERE-----MKTYIPPKGETKKKFK 89
             +WK M  K K      GK++ M    K+R E+      MKT +  + E   K+K
Sbjct:   304 KWKVMKTKVKSRQEKVGKWKVMKTKVKSRQEKVGKWKVMKTKVKSRQEKVGKWK 465

 Score = 44 (15.5 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
 Identities = 17/54 (31%), Positives = 25/54 (46%), Frame = +1

Query:    47 RWKTMSAKEK------GKFEDMAKADKARYERE-----MKTYIPPKGETKKKFK 89
             +WK M  K K      GK++ M    K+R E+      MKT +  + E   K+K
Sbjct:   355 KWKVMKTKVKSRQEKVGKWKVMKTKVKSRQEKVGKWKVMKTKVKSRQEKLGKWK 516

 Score = 42 (14.8 bits), Expect = 2.5e-05, Sum P(2) = 2.5e-05
 Identities = 12/35 (34%), Positives = 18/35 (51%), Frame = +1

Query:    47 RWKTMSAKEK------GKFEDMAKADKARYEREMK 75
             +WK M  K K      GK++ M    K+R E+ +K
Sbjct:   457 KWKVMKTKVKSRQEKLGKWKVMKTKVKSRQEKVVK 561


WARNING:  HSPs involving 1888 database sequences were not reported due to the
          limiting value of parameter B = 250.


Parameters:

  ctxfactor=6.00
  E=10

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.304   0.127   0.357    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E    S W   T  X   E2     S2
   +0      0      214       214       10.  78 3  13 23  0.059   38
                                                    31  0.068   40


Statistics:

  Database:  /dbEST1/wublast/database/embl/embl.fas
    Title:  embl
    Release date:  unknown
    Posted date:  12:04 PM GMT Feb 21, 2000
    Format:  BLAST
  # of letters in database:  675,252,082
  # of sequences in database:  442,729
  # of database sequences satisfying E:  2138
  No. of states in DFA:  446 (48 KB)
  Total size of DFA:  68 KB (128 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t  Elapsed: 00:00:00
  No. of threads or processors used:  2
  Search cpu time:  391.98u 1.82s 393.80t  Elapsed: 00:03:30
  Total cpu time:  392.97u 1.98s 394.95t  Elapsed: 00:03:32
  Start:  Mon Feb 21 12:14:11 2000   End:  Mon Feb 21 12:17:43 2000

WARNINGS ISSUED:  2
