TBLASTX 2.0a19MP-WashU [05-Feb-1998] [Build sol2.5-ultra 01:47:35 05-Feb-1998]

Reference:  Gish, Warren (1994-1997).  unpublished.
Altschul, Stephen F., Warren Gish, Webb Miller, Eugene W. Myers, and David J.
Lipman (1990).  Basic local alignment search tool.  J. Mol. Biol. 215:403-10.

Notice:  statistical significance is estimated under the assumption that the
equivalent of one entire reading frame of the query sequence and one entire
reading frame of the database code for protein and that significant alignments
will only involve coding reading frames.

Query=  U51677
        (2575 letters)

  Translating both strands of query sequence in all 6 reading frames

Database:  embl
           442,729 sequences; 675,252,082 total letters.
Searching***.**.**.*.10*..*..*20**.*******.*..30....40....50....60*...*.70
         .*.*.*.**80*.*.*..90...*.100% done

                                                                     Smallest
                                                                       Sum
                                                     Reading  High  Probability
Sequences producing High-scoring Segment Pairs:        Frame Score  P(N)      N

U51677 Human non-histone chromatin protein HMG1 (HMG1)... +1  4354  0.0       1
D63874 Human mRNA for HMG-1, complete cds.                -2   744  1.1e-156  4
X80457 M.musculus HMG1 gene                               +2   407  6.5e-156  6
M64986 Rat amphoterin mRNA, complete cds.                 +2   401  4.2e-150  5

>U51677 Human non-histone chromatin protein HMG1 (HMG1) gene, complete cds.
        Length = 2575

  Plus Strand HSPs:

 Score = 4354 (1532.7 bits), Expect = 0.0, P = 0.0
 Identities = 858/858 (100%), Positives = 858/858 (100%), Frame = +1 / +1

Query:     1 MGKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKVRGLKTC*QG 180
             MGKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKVRGLKTC*QG
Sbjct:     1 MGKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKVRGLKTC*QG 180

Query:   181 N*KTVSN*GCKKKPSWHSRSGTLLHSKRHWF*G*FT*MLQLKLTN*LFCRPCLLKRKENL 360
             N*KTVSN*GCKKKPSWHSRSGTLLHSKRHWF*G*FT*MLQLKLTN*LFCRPCLLKRKENL
Sbjct:   181 N*KTVSN*GCKKKPSWHSRSGTLLHSKRHWF*G*FT*MLQLKLTN*LFCRPCLLKRKENL 360

Query:   361 KIWQKRTRPVMKEK*KPISLPKGRQKRSSRIPMHPRGLREYLACFYFPDTFYSRI*EKFS 540
             KIWQKRTRPVMKEK*KPISLPKGRQKRSSRIPMHPRGLREYLACFYFPDTFYSRI*EKFS
Sbjct:   361 KIWQKRTRPVMKEK*KPISLPKGRQKRSSRIPMHPRGLREYLACFYFPDTFYSRI*EKFS 540

Query:   541 KLLCQFRV*MYNQSFLANTCSYWLYLNSIKFLLGGSVPRAFELDIWSPLPSVSPFDLFIS 720
             KLLCQFRV*MYNQSFLANTCSYWLYLNSIKFLLGGSVPRAFELDIWSPLPSVSPFDLFIS
Sbjct:   541 KLLCQFRV*MYNQSFLANTCSYWLYLNSIKFLLGGSVPRAFELDIWSPLPSVSPFDLFIS 720

Query:   721 *KILSL*NSVIVECSSRVLASIN*IVVN*ALVVKDI*YIIVFAPCPMHHRNSQAALNSNA 900
             *KILSL*NSVIVECSSRVLASIN*IVVN*ALVVKDI*YIIVFAPCPMHHRNSQAALNSNA
Sbjct:   721 *KILSL*NSVIVECSSRVLASIN*IVVN*ALVVKDI*YIIVFAPCPMHHRNSQAALNSNA 900

Query:   901 VYT**YLFL*SVNLKS*N*FFF*FGLLPLLL*VSPKNQRRTSWPVHW*CCEETGRDVE*H 1080
             VYT**YLFL*SVNLKS*N*FFF*FGLLPLLL*VSPKNQRRTSWPVHW*CCEETGRDVE*H
Sbjct:   901 VYT**YLFL*SVNLKS*N*FFF*FGLLPLLL*VSPKNQRRTSWPVHW*CCEETGRDVE*H 1080

Query:  1081 CCR*QAAL*KEGCEAEGKIRKGKKCGFAW*NDDKYARCMIVLSLRCNKFLG*QLH*VWC* 1260
             CCR*QAAL*KEGCEAEGKIRKGKKCGFAW*NDDKYARCMIVLSLRCNKFLG*QLH*VWC*
Sbjct:  1081 CCR*QAAL*KEGCEAEGKIRKGKKCGFAW*NDDKYARCMIVLSLRCNKFLG*QLH*VWC* 1260

Query:  1261 YKSSSFKECRGPNKLGFF*LKCNQTQTKAVYIYVGFVIPQYLEVHENVGSHFKSKMSIFK 1440
             YKSSSFKECRGPNKLGFF*LKCNQTQTKAVYIYVGFVIPQYLEVHENVGSHFKSKMSIFK
Sbjct:  1261 YKSSSFKECRGPNKLGFF*LKCNQTQTKAVYIYVGFVIPQYLEVHENVGSHFKSKMSIFK 1440

Query:  1441 WLGIQYKNRLDKVI*AIFFLVIS*NIYVLFL*ILKKPQHH*VKLQVCCSVQ*INKIKEIY 1620
             WLGIQYKNRLDKVI*AIFFLVIS*NIYVLFL*ILKKPQHH*VKLQVCCSVQ*INKIKEIY
Sbjct:  1441 WLGIQYKNRLDKVI*AIFFLVIS*NIYVLFL*ILKKPQHH*VKLQVCCSVQ*INKIKEIY 1620

Query:  1621 NSYSSVN*NIKYLIFSFSHSEKCLFLDVS*PNCMFIDKLPFFFKTTFPTKD*GLTV*TCR 1800
             NSYSSVN*NIKYLIFSFSHSEKCLFLDVS*PNCMFIDKLPFFFKTTFPTKD*GLTV*TCR
Sbjct:  1621 NSYSSVN*NIKYLIFSFSHSEKCLFLDVS*PNCMFIDKLPFFFKTTFPTKD*GLTV*TCR 1800

Query:  1801 VLFCIQKVAVSTL*SKSLHSGFNRVRIW*IIAPQ*GITLQILDYAIS*VIDCYNDLVFLC 1980
             VLFCIQKVAVSTL*SKSLHSGFNRVRIW*IIAPQ*GITLQILDYAIS*VIDCYNDLVFLC
Sbjct:  1801 VLFCIQKVAVSTL*SKSLHSGFNRVRIW*IIAPQ*GITLQILDYAIS*VIDCYNDLVFLC 1980

Query:  1981 SFIEVLVISGVAVDLQIRDILV*LES*FLS*SSAMFYFFP*SFFLPYCFILPLLWKDIAA 2160
             SFIEVLVISGVAVDLQIRDILV*LES*FLS*SSAMFYFFP*SFFLPYCFILPLLWKDIAA
Sbjct:  1981 SFIEVLVISGVAVDLQIRDILV*LES*FLS*SSAMFYFFP*SFFLPYCFILPLLWKDIAA 2160

Query:  2161 YRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE*VGSSA 2340
             YRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE*VGSSA
Sbjct:  2161 YRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE*VGSSA 2340

Query:  2341 VFFFLSIKHLTPLYTTHSF*RKKLKCKAV*DLFLNCTVSFFV*LTHYRMCL*IALSWWYF 2520
             VFFFLSIKHLTPLYTTHSF*RKKLKCKAV*DLFLNCTVSFFV*LTHYRMCL*IALSWWYF
Sbjct:  2341 VFFFLSIKHLTPLYTTHSF*RKKLKCKAV*DLFLNCTVSFFV*LTHYRMCL*IALSWWYF 2520

Query:  2521 Q*PLTLPGTVWGL*IGME 2574
             Q*PLTLPGTVWGL*IGME
Sbjct:  2521 Q*PLTLPGTVWGL*IGME 2574

 Score = 4328 (1523.5 bits), Expect = 0.0, P = 0.0
 Identities = 858/858 (100%), Positives = 858/858 (100%), Frame = +2 / +2

Query:     2 WAKEILRSREAKCHHMHFLCKLVGRSIRRSTQMLQSTSQSFLRSAQRGGR*EGLKHANKV 181
             WAKEILRSREAKCHHMHFLCKLVGRSIRRSTQMLQSTSQSFLRSAQRGGR*EGLKHANKV
Sbjct:     2 WAKEILRSREAKCHHMHFLCKLVGRSIRRSTQMLQSTSQSFLRSAQRGGR*EGLKHANKV 181

Query:   182 IKRQFPIEDAKKSLVGILVVGRYYIAKDIGFEDNLLKCYNLNLQINYFVDHVC*RERKI* 361
             IKRQFPIEDAKKSLVGILVVGRYYIAKDIGFEDNLLKCYNLNLQINYFVDHVC*RERKI*
Sbjct:   182 IKRQFPIEDAKKSLVGILVVGRYYIAKDIGFEDNLLKCYNLNLQINYFVDHVC*RERKI* 361

Query:   362 RYGKSGQGPL*KRNENLYPSQRGDKKEVQGSQCTQEASVSILPVFTSQTRFTVESERNLA 541
             RYGKSGQGPL*KRNENLYPSQRGDKKEVQGSQCTQEASVSILPVFTSQTRFTVESERNLA
Sbjct:   362 RYGKSGQGPL*KRNENLYPSQRGDKKEVQGSQCTQEASVSILPVFTSQTRFTVESERNLA 541

Query:   542 SYFVSLECKCTIKVS*LILVHIGYI*IV*NSCWVGVFPEHLN*TFGLLCPVYLLLIFLFL 721
             SYFVSLECKCTIKVS*LILVHIGYI*IV*NSCWVGVFPEHLN*TFGLLCPVYLLLIFLFL
Sbjct:   542 SYFVSLECKCTIKVS*LILVHIGYI*IV*NSCWVGVFPEHLN*TFGLLCPVYLLLIFLFL 721

Query:   722 EKYYPFEIV*L*NVHLGF*LV*IK*L*IKLWL*RIFSIL*YLHPVQCITEIHRQL*IAMQ 901
             EKYYPFEIV*L*NVHLGF*LV*IK*L*IKLWL*RIFSIL*YLHPVQCITEIHRQL*IAMQ
Sbjct:   722 EKYYPFEIV*L*NVHLGF*LV*IK*L*IKLWL*RIFSIL*YLHPVQCITEIHRQL*IAMQ 901

Query:   902 CTPDSICFCDLLT*NPKINFFFSSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNT 1081
             CTPDSICFCDLLT*NPKINFFFSSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNT
Sbjct:   902 CTPDSICFCDLLT*NPKINFFFSSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNT 1081

Query:  1082 AADDKQPYEKKAAKLKEKYEKVRSVGLLGKMMTSTPDV*LYLV*GVISF*GNSYIKYGVD 1261
             AADDKQPYEKKAAKLKEKYEKVRSVGLLGKMMTSTPDV*LYLV*GVISF*GNSYIKYGVD
Sbjct:  1082 AADDKQPYEKKAAKLKEKYEKVRSVGLLGKMMTSTPDV*LYLV*GVISF*GNSYIKYGVD 1261

Query:  1262 ISPHPSKNAEDQIN*GFFD*NVIRLRQRLCTFMLVLLFPSILKFMKMLVVTSSQK*AFSN 1441
             ISPHPSKNAEDQIN*GFFD*NVIRLRQRLCTFMLVLLFPSILKFMKMLVVTSSQK*AFSN
Sbjct:  1262 ISPHPSKNAEDQIN*GFFD*NVIRLRQRLCTFMLVLLFPSILKFMKMLVVTSSQK*AFSN 1441

Query:  1442 GLAYSTKTG*TK*YRLYFS*SYPETFMFFSFRYSKNHSITKLNYKSAALSSKLIRLRKSI 1621
             GLAYSTKTG*TK*YRLYFS*SYPETFMFFSFRYSKNHSITKLNYKSAALSSKLIRLRKSI
Sbjct:  1442 GLAYSTKTG*TK*YRLYFS*SYPETFMFFSFRYSKNHSITKLNYKSAALSSKLIRLRKSI 1621

Query:  1622 TLIVQ*IEILNT*FSALVILKSVYF*MFLNLIACLLTNYLFFLRPHFLLRIKV*QCKPVE 1801
             TLIVQ*IEILNT*FSALVILKSVYF*MFLNLIACLLTNYLFFLRPHFLLRIKV*QCKPVE
Sbjct:  1622 TLIVQ*IEILNT*FSALVILKSVYF*MFLNLIACLLTNYLFFLRPHFLLRIKV*QCKPVE 1801

Query:  1802 CFFAFRRWQCLPFNQSLYILVLIELGSGR*LHLNEA*LCKY*TMPFHEL*IVIMILYFYV 1981
             CFFAFRRWQCLPFNQSLYILVLIELGSGR*LHLNEA*LCKY*TMPFHEL*IVIMILYFYV
Sbjct:  1802 CFFAFRRWQCLPFNQSLYILVLIELGSGR*LHLNEA*LCKY*TMPFHEL*IVIMILYFYV 1981

Query:  1982 HLLKF*LFLELLWIYRYVIFWYN*NLDFFHKVLPCSISFLNLFFFPTVLSSLCFGRILLH 2161
             HLLKF*LFLELLWIYRYVIFWYN*NLDFFHKVLPCSISFLNLFFFPTVLSSLCFGRILLH
Sbjct:  1982 HLLKF*LFLELLWIYRYVIFWYN*NLDFFHKVLPCSISFLNLFFFPTVLSSLCFGRILLH 2161

Query:  2162 IELKESLMQQKRELSRLKKARKRRKRRKMRKMKRMRRRRKMKKMKMKKKMMMMNKLVLAQ 2341
             IELKESLMQQKRELSRLKKARKRRKRRKMRKMKRMRRRRKMKKMKMKKKMMMMNKLVLAQ
Sbjct:  2162 IELKESLMQQKRELSRLKKARKRRKRRKMRKMKRMRRRRKMKKMKMKKKMMMMNKLVLAQ 2341

Query:  2342 FFFSCL*SI*PPCTQLTPFKEKN*NVRLCKICF*TVQCLFLYS*HTTECVFR*PCPGGIF 2521
             FFFSCL*SI*PPCTQLTPFKEKN*NVRLCKICF*TVQCLFLYS*HTTECVFR*PCPGGIF
Sbjct:  2342 FFFSCL*SI*PPCTQLTPFKEKN*NVRLCKICF*TVQCLFLYS*HTTECVFR*PCPGGIF 2521

Query:  2522 NSH*PCLVQYGGCKLAWK 2575
             NSH*PCLVQYGGCKLAWK
Sbjct:  2522 NSH*PCLVQYGGCKLAWK 2575

  Minus Strand HSPs:

 Score = 4339 (1527.4 bits), Expect = 0.0, P = 0.0
 Identities = 858/858 (100%), Positives = 858/858 (100%), Frame = -1 / -1

Query:  2575 FPCQFTTPILYQARLVAIENTTRTGLSKDTFGSVLTIQKKTLYSLKTNLTQPYISIFFFK 2396
             FPCQFTTPILYQARLVAIENTTRTGLSKDTFGSVLTIQKKTLYSLKTNLTQPYISIFFFK
Sbjct:  2575 FPCQFTTPILYQARLVAIENTTRTGLSKDTFGSVLTIQKKTLYSLKTNLTQPYISIFFFK 2396

Query:  2395 RSELCTGGLNAL*TRKKKLR*NQLIHHHHLLLHLHLLHLPPPPHPLHLPHLPPLPSFSCF 2216
             RSELCTGGLNAL*TRKKKLR*NQLIHHHHLLLHLHLLHLPPPPHPLHLPHLPPLPSFSCF
Sbjct:  2395 RSELCTGGLNAL*TRKKKLR*NQLIHHHHLLLHLHLLHLPPPPHPLHLPHLPPLPSFSCF 2216

Query:  2215 FQP*QLPFLLHQAFL*LDMQQYPSKAKGG*NSREEKKIKERNRTWQNFMKEIKILVIPKY 2036
             FQP*QLPFLLHQAFL*LDMQQYPSKAKGG*NSREEKKIKERNRTWQNFMKEIKILVIPKY
Sbjct:  2215 FQP*QLPFLLHQAFL*LDMQQYPSKAKGG*NSREEKKIKERNRTWQNFMKEIKILVIPKY 2036

Query:  2035 HVSVDPQQLQK*LELQ*MNIKIQDHYNNL*LMKWHSLIFAKLCLIEVQLSTRS*LY*NQN 1856
             HVSVDPQQLQK*LELQ*MNIKIQDHYNNL*LMKWHSLIFAKLCLIEVQLSTRS*LY*NQN
Sbjct:  2035 HVSVDPQQLQK*LELQ*MNIKIQDHYNNL*LMKWHSLIFAKLCLIEVQLSTRS*LY*NQN 1856

Query:  1855 VETLIKG*TLPPSECKKALYRFTLSDLNP**EMWS*KKKVICQ*TCN*VKKHLEINTFQN 1676
             VETLIKG*TLPPSECKKALYRFTLSDLNP**EMWS*KKKVICQ*TCN*VKKHLEINTFQN
Sbjct:  1855 VETLIKG*TLPPSECKKALYRFTLSDLNP**EMWS*KKKVICQ*TCN*VKKHLEINTFQN 1676

Query:  1675 D*S*KLSI*YFNLLNYKSYRFP*SY*FTGQSSRLVI*LSDAVVF*VSKGKEHKCFRI*LR 1496
             D*S*KLSI*YFNLLNYKSYRFP*SY*FTGQSSRLVI*LSDAVVF*VSKGKEHKCFRI*LR
Sbjct:  1675 D*S*KLSI*YFNLLNYKSYRFP*SY*FTGQSSRLVI*LSDAVVF*VSKGKEHKCFRI*LR 1496

Query:  1495 KI*PILLCLACFCTVCQAI*KCSFLT*SDYQHFHELQDTGE*QNQHKCTQPLSESDYILV 1316
             KI*PILLCLACFCTVCQAI*KCSFLT*SDYQHFHELQDTGE*QNQHKCTQPLSESDYILV
Sbjct:  1495 KI*PILLCLACFCTVCQAI*KCSFLT*SDYQHFHELQDTGE*QNQHKCTQPLSESDYILV 1316

Query:  1315 KKTLIYLVLCIL*RMRTYINTILNVAVTLKTYYTSN*VQSYIWRTCHHFTKQTHTSYLFV 1136
             KKTLIYLVLCIL*RMRTYINTILNVAVTLKTYYTSN*VQSYIWRTCHHFTKQTHTSYLFV
Sbjct:  1315 KKTLIYLVLCIL*RMRTYINTILNVAVTLKTYYTSN*VQSYIWRTCHHFTKQTHTSYLFV 1136

Query:  1135 FFLQLRSLLFIRLLVICSSVIPHLSQFLRNITNGQARMFSFDFWAILRAEEEEGRTKKKI 956
             FFLQLRSLLFIRLLVICSSVIPHLSQFLRNITNGQARMFSFDFWAILRAEEEEGRTKKKI
Sbjct:  1135 FFLQLRSLLFIRLLVICSSVIPHLSQFLRNITNGQARMFSFDFWAILRAEEEEGRTKKKI 956

Query:   955 NFRILS*QITKTNTIRCTLHCYLKLPVNFCDALDRVQIL*YTKYPSQPKLNLQLFNLY*L 776
             NFRILS*QITKTNTIRCTLHCYLKLPVNFCDALDRVQIL*YTKYPSQPKLNLQLFNLY*L
Sbjct:   955 NFRILS*QITKTNTIRCTLHCYLKLPVNFCDALDRVQIL*YTKYPSQPKLNLQLFNLY*L 776

Query:   775 EP*MNILQLHYFKGIVFFKK*KDQKEIHWAKETKCLIQMLWEHSHPTGILYYLNITNMNK 596
             EP*MNILQLHYFKGIVFFKK*KDQKEIHWAKETKCLIQMLWEHSHPTGILYYLNITNMNK
Sbjct:   775 EP*MNILQLHYFKGIVFFKK*KDQKEIHWAKETKCLIQMLWEHSHPTGILYYLNITNMNK 596

Query:   595 Y*LRNFDCTFTL*TDKVAC*ISLRFYCKTCLGSKNRQDTHGGLLGALGSLNFFFVSPLGG 416
             Y*LRNFDCTFTL*TDKVAC*ISLRFYCKTCLGSKNRQDTHGGLLGALGSLNFFFVSPLGG
Sbjct:   595 Y*LRNFDCTFTL*TDKVAC*ISLRFYCKTCLGSKNRQDTHGGLLGALGSLNFFFVSPLGG 416

Query:   415 I*VFISLS*RALSAFAISSNFPFSLADMVYKIINL*V*VVTFK*IILKTNVFCYVIASHY 236
             I*VFISLS*RALSAFAISSNFPFSLADMVYKIINL*V*VVTFK*IILKTNVFCYVIASHY
Sbjct:   415 I*VFISLS*RALSAFAISSNFPFSLADMVYKIINL*V*VVTFK*IILKTNVFCYVIASHY 236

Query:   235 ENAN*AFFCILNWKLSFNYLVSMF*ALLPSTSLSTS*KTLRS*LKHLGASSYAPPDKFAQ 56
             ENAN*AFFCILNWKLSFNYLVSMF*ALLPSTSLSTS*KTLRS*LKHLGASSYAPPDKFAQ
Sbjct:   235 ENAN*AFFCILNWKLSFNYLVSMF*ALLPSTSLSTS*KTLRS*LKHLGASSYAPPDKFAQ 56

Query:    55 KMHMMTFCLSAS*DLLCP 2
             KMHMMTFCLSAS*DLLCP
Sbjct:    55 KMHMMTFCLSAS*DLLCP 2

 Score = 4298 (1513.0 bits), Expect = 0.0, P = 0.0
 Identities = 858/858 (100%), Positives = 858/858 (100%), Frame = -2 / -2

Query:  2574 FHANLQPPYCTRQG*WLLKIPPGQGYLKTHSVVC*LYKKRHCTV*KQILHSLTFQFFSLK 2395
             FHANLQPPYCTRQG*WLLKIPPGQGYLKTHSVVC*LYKKRHCTV*KQILHSLTFQFFSLK
Sbjct:  2574 FHANLQPPYCTRQG*WLLKIPPGQGYLKTHSVVC*LYKKRHCTV*KQILHSLTFQFFSLK 2395

Query:  2394 GVSCVQGG*MLYRQEKKNCARTNLFIIIIFFFIFIFFIFLLLLILFIFLIFLLFLLFLAF 2215
             GVSCVQGG*MLYRQEKKNCARTNLFIIIIFFFIFIFFIFLLLLILFIFLIFLLFLLFLAF
Sbjct:  2394 GVSCVQGG*MLYRQEKKNCARTNLFIIIIFFFIFIFFIFLLLLILFIFLIFLLFLLFLAF 2215

Query:  2214 FSLDNSLFCCIRLSFSSICSNILPKQREDKTVGKKKRLRKEIEHGRTL*KKSRF*LYQNI 2035
             FSLDNSLFCCIRLSFSSICSNILPKQREDKTVGKKKRLRKEIEHGRTL*KKSRF*LYQNI
Sbjct:  2214 FSLDNSLFCCIRLSFSSICSNILPKQREDKTVGKKKRLRKEIEHGRTL*KKSRF*LYQNI 2035

Query:  2034 TYL*IHSNSRNN*NFNK*T*KYKIIITIYNS*NGIV*YLQSYASLRCNYLPDPNSIKTRM 1855
             TYL*IHSNSRNN*NFNK*T*KYKIIITIYNS*NGIV*YLQSYASLRCNYLPDPNSIKTRM
Sbjct:  2034 TYL*IHSNSRNN*NFNK*T*KYKIIITIYNS*NGIV*YLQSYASLRCNYLPDPNSIKTRM 1855

Query:  1854 *RL*LKGRHCHLLNAKKHSTGLHCQTLILSRKCGLKKKR*FVNKHAIRLRNI*K*TLFRM 1675
             *RL*LKGRHCHLLNAKKHSTGLHCQTLILSRKCGLKKKR*FVNKHAIRLRNI*K*TLFRM
Sbjct:  1854 *RL*LKGRHCHLLNAKKHSTGLHCQTLILSRKCGLKKKR*FVNKHAIRLRNI*K*TLFRM 1675

Query:  1674 TKAEN*VFNISIY*TIRVIDFLNLINLLDRAADL*FNLVMLWFFEYLKEKNINVSGYD*E 1495
             TKAEN*VFNISIY*TIRVIDFLNLINLLDRAADL*FNLVMLWFFEYLKEKNINVSGYD*E
Sbjct:  1674 TKAEN*VFNISIY*TIRVIDFLNLINLLDRAADL*FNLVMLWFFEYLKEKNINVSGYD*E 1495

Query:  1494 KYSLYYFV*PVFVLYAKPFENAHF*LEVTTNIFMNFKILGNNKTNINVHSLCLSLITF*S 1315
             KYSLYYFV*PVFVLYAKPFENAHF*LEVTTNIFMNFKILGNNKTNINVHSLCLSLITF*S
Sbjct:  1494 KYSLYYFV*PVFVLYAKPFENAHF*LEVTTNIFMNFKILGNNKTNINVHSLCLSLITF*S 1315

Query:  1314 KKP*FIWSSAFFEG*GLISTPYLM*LLP*KLITPQTKYNHTSGVLVIILPSKPTLLTFSY 1135
             KKP*FIWSSAFFEG*GLISTPYLM*LLP*KLITPQTKYNHTSGVLVIILPSKPTLLTFSY
Sbjct:  1314 KKP*FIWSSAFFEG*GLISTPYLM*LLP*KLITPQTKYNHTSGVLVIILPSKPTLLTFSY 1135

Query:  1134 FSFSFAAFFS*GCLSSAAVLFHISPSFFATSPMDRPGCSPLIFGRYSEQKRKKAELKKKL 955
             FSFSFAAFFS*GCLSSAAVLFHISPSFFATSPMDRPGCSPLIFGRYSEQKRKKAELKKKL
Sbjct:  1134 FSFSFAAFFS*GCLSSAAVLFHISPSFFATSPMDRPGCSPLIFGRYSEQKRKKAELKKKL 955

Query:   954 ILGF*VNRSQKQILSGVHCIAI*SCL*ISVMHWTGCKYYNILNILHNQSLIYNYLIYTS* 775
             ILGF*VNRSQKQILSGVHCIAI*SCL*ISVMHWTGCKYYNILNILHNQSLIYNYLIYTS*
Sbjct:   954 ILGF*VNRSQKQILSGVHCIAI*SCL*ISVMHWTGCKYYNILNILHNQSLIYNYLIYTS* 775

Query:   774 NPR*TFYNYTISKG*YFSRNKKIKRRYTGQRRPNV*FKCSGNTPTQQEFYTI*I*PI*TS 595
             NPR*TFYNYTISKG*YFSRNKKIKRRYTGQRRPNV*FKCSGNTPTQQEFYTI*I*PI*TS
Sbjct:   774 NPR*TFYNYTISKG*YFSRNKKIKRRYTGQRRPNV*FKCSGNTPTQQEFYTI*I*PI*TS 595

Query:   594 IS*ETLIVHLHSKLTK*LAKFLSDSTVKRVWEVKTGKILTEASWVHWDP*TSFLSPLWEG 415
             IS*ETLIVHLHSKLTK*LAKFLSDSTVKRVWEVKTGKILTEASWVHWDP*TSFLSPLWEG
Sbjct:   594 IS*ETLIVHLHSKLTK*LAKFLSDSTVKRVWEVKTGKILTEASWVHWDP*TSFLSPLWEG 415

Query:   414 YRFSFLFHNGPCPLLPYLQIFLSL*QTWSTK*LICKFKL*HLSKLSSKPMSFAM**RPTT 235
             YRFSFLFHNGPCPLLPYLQIFLSL*QTWSTK*LICKFKL*HLSKLSSKPMSFAM**RPTT
Sbjct:   414 YRFSFLFHNGPCPLLPYLQIFLSL*QTWSTK*LICKFKL*HLSKLSSKPMSFAM**RPTT 235

Query:   234 RMPTRLFFASSIGNCLLITLLACFKPSYLPPL*ALLRKL*EVD*SIWVLLLMLLPTSLHK 55
             RMPTRLFFASSIGNCLLITLLACFKPSYLPPL*ALLRKL*EVD*SIWVLLLMLLPTSLHK
Sbjct:   234 RMPTRLFFASSIGNCLLITLLACFKPSYLPPL*ALLRKL*EVD*SIWVLLLMLLPTSLHK 55

Query:    54 KCI**HFASRLLRISFAH 1
             KCI**HFASRLLRISFAH
Sbjct:    54 KCI**HFASRLLRISFAH 1


>D63874 Human mRNA for HMG-1, complete cds.
        Length = 1194

  Plus Strand HSPs:

 Score = 732 (257.7 bits), Expect = 5.4e-155, Sum P(4) = 5.4e-155
 Identities = 142/143 (99%), Positives = 143/143 (100%), Frame = +2 / +3

Query:  2147 RILLHIELKESLMQQKRELSRLKKARKRRKRRKMRKMKRMRRRRKMKKMKMKKKMMMMNK 2326
             RILLHIELKESLMQQKRELSRLKKARKRRKRRK+RKMKRMRRRRKMKKMKMKKKMMMMNK
Sbjct:   546 RILLHIELKESLMQQKRELSRLKKARKRRKRRKVRKMKRMRRRRKMKKMKMKKKMMMMNK 725

Query:  2327 LVLAQFFFSCL*SI*PPCTQLTPFKEKN*NVRLCKICF*TVQCLFLYS*HTTECVFR*PC 2506
             LVLAQFFFSCL*SI*PPCTQLTPFKEKN*NVRLCKICF*TVQCLFLYS*HTTECVFR*PC
Sbjct:   726 LVLAQFFFSCL*SI*PPCTQLTPFKEKN*NVRLCKICF*TVQCLFLYS*HTTECVFR*PC 905

Query:  2507 PGGIFNSH*PCLVQYGGCKLAWK 2575
             PGGIFNSH*PCLVQYGGCKLAWK
Sbjct:   906 PGGIFNSH*PCLVQYGGCKLAWK 974

 Score = 717 (252.4 bits), Expect = 2.1e-153, Sum P(4) = 2.1e-153
 Identities = 141/143 (98%), Positives = 141/143 (98%), Frame = +1 / +2

Query:  2146 KDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE* 2325
             KDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEE EEDEEDEEEEEDEEDEDEEEDDDDE*
Sbjct:   545 KDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEGEEDEEDEEEEEDEEDEDEEEDDDDE* 724

Query:  2326 VGSSAVFFFLSIKHLTPLYTTHSF*RKKLKCKAV*DLFLNCTVSFFV*LTHYRMCL*IAL 2505
             VGSSAVFFFLSIKHLTPLYTTHSF*RKKLKCKAV*DLFLNCTVSFFV*LTHYRMCL*IAL
Sbjct:   725 VGSSAVFFFLSIKHLTPLYTTHSF*RKKLKCKAV*DLFLNCTVSFFV*LTHYRMCL*IAL 904

Query:  2506 SWWYFQ*PLTLPGTVWGL*IGME 2574
             SWWY Q*PLTLPGTVWGL*IGME
Sbjct:   905 SWWYLQ*PLTLPGTVWGL*IGME 973

 Score = 690 (242.9 bits), Expect = 1.4e-150, Sum P(4) = 1.4e-150
 Identities = 140/143 (97%), Positives = 141/143 (98%), Frame = +3 / +1

Query:  2145 EGYCCISS*RKA*CSKKGSCQG*KKQEKEGRGGR*GR*RG*GGGGR*RR*R*RRR****I 2324
             +GYCCISS*RKA*CSKKGSCQG*KKQEKEGRGGR*GR*RG*GGGGR*RR*R*RRR****I
Sbjct:   544 KGYCCISS*RKA*CSKKGSCQG*KKQEKEGRGGR*GR*RG*GGGGR*RR*R*RRR****I 723

Query:  2325 SWF*RSFFFLVYKAFNPPVHNSLLLKKKIEM*GCVRFVFKLYSVFFCIVNTLPNVSLDSP 2504
             SWF*RSFFFLVYKAFNPPVHNSLLLKKKIEM*GCVRFVFKLYSVFFCIVNTLPNVSLDSP
Sbjct:   724 SWF*RSFFFLVYKAFNPPVHNSLLLKKKIEM*GCVRFVFKLYSVFFCIVNTLPNVSLDSP 903

Query:  2505 VLVVFSIATNLAWYSMGVVNWHG 2573
             VLVV SIATN AWYSMGVVNWHG
Sbjct:   904 VLVVSSIATNPAWYSMGVVNWHG 972

 Score = 306 (107.7 bits), Expect = 5.4e-155, Sum P(4) = 5.4e-155
 Identities = 57/58 (98%), Positives = 57/58 (98%), Frame = +2 / +2

Query:   971 SAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEK 1144
             SAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKA KLKEKYEK
Sbjct:   374 SAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAEKLKEKYEK 547

 Score = 273 (96.1 bits), Expect = 5.4e-155, Sum P(4) = 5.4e-155
 Identities = 50/55 (90%), Positives = 50/55 (90%), Frame = +1 / +2

Query:     1 MGKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKVRGLK 165
             MGKGDPKKPR KMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWK    K
Sbjct:    77 MGKGDPKKPRRKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAK 241

 Score = 265 (93.3 bits), Expect = 5.4e-155, Sum P(4) = 5.4e-155
 Identities = 52/56 (92%), Positives = 52/56 (92%), Frame = +3 / +2

Query:   330 TMSAKEKGKFEDMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPP*VSCLFL 497
             TMSAKEKGKFEDMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPP  S  FL
Sbjct:   227 TMSAKEKGKFEDMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPP--SAFFL 388

 Score = 264 (92.9 bits), Expect = 6.9e-155, Sum P(4) = 6.9e-155
 Identities = 51/55 (92%), Positives = 53/55 (96%), Frame = +2 / +1

Query:   329 DHVC*RERKI*RYGKSGQGPL*KRNENLYPSQRGDKKEVQGSQCTQEASVSILPV 493
             DHVC*RERKI*RYGKSGQGPL*KRNENLYPSQRGDKKEVQGSQCTQEAS  +LP+
Sbjct:   226 DHVC*RERKI*RYGKSGQGPL*KRNENLYPSQRGDKKEVQGSQCTQEASFGLLPL 390

 Score = 257 (90.5 bits), Expect = 3.8e-154, Sum P(4) = 3.8e-154
 Identities = 49/49 (100%), Positives = 49/49 (100%), Frame = +1 / +3

Query:   328 RPCLLKRKENLKIWQKRTRPVMKEK*KPISLPKGRQKRSSRIPMHPRGL 474
             RPCLLKRKENLKIWQKRTRPVMKEK*KPISLPKGRQKRSSRIPMHPRGL
Sbjct:   225 RPCLLKRKENLKIWQKRTRPVMKEK*KPISLPKGRQKRSSRIPMHPRGL 371

  Minus Strand HSPs:

 Score = 744 (261.9 bits), Expect = 1.1e-156, Sum P(4) = 1.1e-156
 Identities = 141/143 (98%), Positives = 142/143 (99%), Frame = -1 / -2

Query:  2575 FPCQFTTPILYQARLVAIENTTRTGLSKDTFGSVLTIQKKTLYSLKTNLTQPYISIFFFK 2396
             FPCQFTTPILYQA LVAIE+TTRTGLSKDTFGSVLTIQKKTLYSLKTNLTQPYISIFFFK
Sbjct:   974 FPCQFTTPILYQAGLVAIEDTTRTGLSKDTFGSVLTIQKKTLYSLKTNLTQPYISIFFFK 795

Query:  2395 RSELCTGGLNAL*TRKKKLR*NQLIHHHHLLLHLHLLHLPPPPHPLHLPHLPPLPSFSCF 2216
             RSELCTGGLNAL*TRKKKLR*NQLIHHHHLLLHLHLLHLPPPPHPLHLPHLPPLPSFSCF
Sbjct:   794 RSELCTGGLNAL*TRKKKLR*NQLIHHHHLLLHLHLLHLPPPPHPLHLPHLPPLPSFSCF 615

Query:  2215 FQP*QLPFLLHQAFL*LDMQQYP 2147
             FQP*QLPFLLHQAFL*LDMQQYP
Sbjct:   614 FQP*QLPFLLHQAFL*LDMQQYP 546

 Score = 735 (258.7 bits), Expect = 1.0e-155, Sum P(4) = 1.0e-155
 Identities = 142/143 (99%), Positives = 142/143 (99%), Frame = -2 / -3

Query:  2574 FHANLQPPYCTRQG*WLLKIPPGQGYLKTHSVVC*LYKKRHCTV*KQILHSLTFQFFSLK 2395
             FHANLQPPYCTRQG*WLLKIPPGQGYLKTHSVVC*LYKKRHCTV*KQILHSLTFQFFSLK
Sbjct:   973 FHANLQPPYCTRQG*WLLKIPPGQGYLKTHSVVC*LYKKRHCTV*KQILHSLTFQFFSLK 794

Query:  2394 GVSCVQGG*MLYRQEKKNCARTNLFIIIIFFFIFIFFIFLLLLILFIFLIFLLFLLFLAF 2215
             GVSCVQGG*MLYRQEKKNCARTNLFIIIIFFFIFIFFIFLLLLILFIFL FLLFLLFLAF
Sbjct:   793 GVSCVQGG*MLYRQEKKNCARTNLFIIIIFFFIFIFFIFLLLLILFIFLTFLLFLLFLAF 614

Query:  2214 FSLDNSLFCCIRLSFSSICSNIL 2146
             FSLDNSLFCCIRLSFSSICSNIL
Sbjct:   613 FSLDNSLFCCIRLSFSSICSNIL 545

 Score = 692 (243.6 bits), Expect = 3.3e-151, Sum P(4) = 3.3e-151
 Identities = 140/143 (97%), Positives = 142/143 (99%), Frame = -3 / -1

Query:  2573 SMPIYNPHTVPGKVSGY*KYHQDRAI*RHIR*CVNYTKKDTVQFKNKSYTALHFNFFL*K 2394
             SMPIYNPHTVPG+VSGY*+YHQDRAI*RHIR*CVNYTKKDTVQFKNKSYTALHFNFFL*K
Sbjct:   972 SMPIYNPHTVPGRVSGY*RYHQDRAI*RHIR*CVNYTKKDTVQFKNKSYTALHFNFFL*K 793

Query:  2393 E*VVYRGVKCFIDKKKKTALEPTYSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSFFFLLF 2214
             E*VVYRGVKCFIDKKKKTALEPTYSSSSSSSSSSSSSSSSSSSSSSSSS SSSSFFFLLF
Sbjct:   792 E*VVYRGVKCFIDKKKKTALEPTYSSSSSSSSSSSSSSSSSSSSSSSSSPSSSSFFFLLF 613

Query:  2213 SALTTPFFAASGFPLARYAAISF 2145
             SALTTPFFAASGFPLARYAAISF
Sbjct:   612 SALTTPFFAASGFPLARYAAISF 544

 Score = 309 (108.8 bits), Expect = 1.1e-156, Sum P(4) = 1.1e-156
 Identities = 62/80 (77%), Positives = 66/80 (82%), Frame = -3 / -2

Query:  1211 KLSTIIHLAYLSSFYQANPHFLPFRIFPSASQPSFHKAACHLQQCYSTSLPVSSQHHQWT 1032
             +L  ++H A+L    Q      PFRIFPSA QPSFHKAACHLQQCYSTSLPVSSQHHQWT
Sbjct:   602 QLPFLLHQAFL*LDMQQ----YPFRIFPSAFQPSFHKAACHLQQCYSTSLPVSSQHHQWT 435

Query:  1031 GQDVLL*FLGDTQSRRGRRP 972
             GQDVLL*FLGDTQSRRGRRP
Sbjct:   434 GQDVLL*FLGDTQSRRGRRP 375

 Score = 281 (98.9 bits), Expect = 1.1e-156, Sum P(4) = 1.1e-156
 Identities = 54/70 (77%), Positives = 58/70 (82%), Frame = -2 / -2

Query:   534 FLSDSTVKRVWEVKTGKILTEASWVHWDP*TSFLSPLWEGYRFSFLFHNGPCPLLPYLQI 355
             FL D+  +R      G+   EASWVHWDP*TSFLSPLWEGYRFSFLFHNGPCPLLPYLQI
Sbjct:   413 FLGDTQSRR------GRRPKEASWVHWDP*TSFLSPLWEGYRFSFLFHNGPCPLLPYLQI 252

Query:   354 FLSL*QTWST 325
             FLSL*QTWS+
Sbjct:   251 FLSL*QTWSS 222

 Score = 258 (90.8 bits), Expect = 1.1e-156, Sum P(4) = 1.1e-156
 Identities = 48/54 (88%), Positives = 50/54 (92%), Frame = -3 / -1

Query:   164 LSPLTFHLSEHFLENSEKLTEASGCFFLCSSRQVCTKNAYDDILPLGFLGSPLP 3
             L+ + FHLSEHFLENSEKLTEASGCFFLCSSRQVCTKNAYDDI  LGFLGSPLP
Sbjct:   240 LADMVFHLSEHFLENSEKLTEASGCFFLCSSRQVCTKNAYDDIFRLGFLGSPLP 79

 Score = 227 (79.9 bits), Expect = 2.1e-153, Sum P(4) = 2.1e-153
 Identities = 47/49 (95%), Positives = 48/49 (97%), Frame = -1 / -2

Query:   148 STSLSTS*KTLRS*LKHLGASSYAPPDKFAQKMHMMTFCLSAS*DLLCP 2
             STSLSTS*KTLRS*LKHLGASSYAPPDKFAQKMHMMTF +SAS*DLLCP
Sbjct:   224 STSLSTS*KTLRS*LKHLGASSYAPPDKFAQKMHMMTFSVSAS*DLLCP 78


>X80457 M.musculus HMG1 gene
        Length = 2547

  Plus Strand HSPs:

 Score = 407 (143.3 bits), Expect = 6.5e-156, Sum P(6) = 6.5e-156
 Identities = 76/77 (98%), Positives = 76/77 (98%), Frame = +2 / +2

Query:  2345 FFSCL*SI*PPCTQLTPFKEKN*NVRLCKICF*TVQCLFLYS*HTTECVFR*PCPGGIFN 2524
             FFSCL*SI*PPCTQLTPFKEKN*NVRLCKICF*TVQCLFLYS*HTTECVFR*PCPGGIFN
Sbjct:  2195 FFSCL*SI*PPCTQLTPFKEKN*NVRLCKICF*TVQCLFLYS*HTTECVFR*PCPGGIFN 2374

Query:  2525 SH*PCLVQYGGCKLAWK 2575
             SH*PCLVQ GGCKLAWK
Sbjct:  2375 SH*PCLVQSGGCKLAWK 2425

 Score = 404 (142.2 bits), Expect = 1.6e-155, Sum P(6) = 1.6e-155
 Identities = 76/77 (98%), Positives = 77/77 (100%), Frame = +3 / +3

Query:  2343 FFFLVYKAFNPPVHNSLLLKKKIEM*GCVRFVFKLYSVFFCIVNTLPNVSLDSPVLVVFS 2522
             FFFLVYKAFNPPVHNSLLLKKKIEM*GCVRFVFKLYSVFFCIVNTLPNVSLDSPVLVVFS
Sbjct:  2193 FFFLVYKAFNPPVHNSLLLKKKIEM*GCVRFVFKLYSVFFCIVNTLPNVSLDSPVLVVFS 2372

Query:  2523 IATNLAWYSMGVVNWHG 2573
             IATNLAWYS+GVVNWHG
Sbjct:  2373 IATNLAWYSLGVVNWHG 2423

 Score = 400 (140.8 bits), Expect = 5.0e-155, Sum P(6) = 5.0e-155
 Identities = 77/77 (100%), Positives = 77/77 (100%), Frame = +1 / +1

Query:  2344 FFFLSIKHLTPLYTTHSF*RKKLKCKAV*DLFLNCTVSFFV*LTHYRMCL*IALSWWYFQ 2523
             FFFLSIKHLTPLYTTHSF*RKKLKCKAV*DLFLNCTVSFFV*LTHYRMCL*IALSWWYFQ
Sbjct:  2194 FFFLSIKHLTPLYTTHSF*RKKLKCKAV*DLFLNCTVSFFV*LTHYRMCL*IALSWWYFQ 2373

Query:  2524 *PLTLPGTVWGL*IGME 2574
             *PLTLPGTVWGL*IGME
Sbjct:  2374 *PLTLPGTVWGL*IGME 2424

 Score = 363 (127.8 bits), Expect = 6.5e-156, Sum P(6) = 6.5e-156
 Identities = 73/84 (86%), Positives = 77/84 (91%), Frame = +1 / +2

Query:  2101 *SFFLPYCFIL-PLLWKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEE 2277
             *SF    C+IL  L WKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEE++EEDEEDEEEE
Sbjct:  1949 *SFIFCLCYILLSLFWKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEDEEEDEEDEEEE 2128

Query:  2278 EDEEDEDEEEDDDDE*VGSSAVFF 2349
             E+EEDEDEEEDDDDE*VGSSAVFF
Sbjct:  2129 EEEEDEDEEEDDDDE*VGSSAVFF 2200

 Score = 330 (116.2 bits), Expect = 6.5e-156, Sum P(6) = 6.5e-156
 Identities = 62/62 (100%), Positives = 62/62 (100%), Frame = +2 / +2

Query:   965 FSSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEK 1144
             FSSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEK
Sbjct:  1004 FSSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEK 1183

Query:  1145 VR 1150
             VR
Sbjct:  1184 VR 1189

 Score = 302 (106.3 bits), Expect = 6.5e-156, Sum P(6) = 6.5e-156
 Identities = 56/58 (96%), Positives = 56/58 (96%), Frame = +1 / +2

Query:     1 MGKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKVRGLKTC* 174
             MGKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKVRGL  C*
Sbjct:   173 MGKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKVRGL*RC* 346

 Score = 268 (94.3 bits), Expect = 6.5e-156, Sum P(6) = 6.5e-156
 Identities = 52/52 (100%), Positives = 52/52 (100%), Frame = +3 / +2

Query:   327 *TMSAKEKGKFEDMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPP*V 482
             *TMSAKEKGKFEDMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPP*V
Sbjct:   467 *TMSAKEKGKFEDMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPP*V 622

 Score = 228 (80.3 bits), Expect = 3.5e-148, Sum P(6) = 3.5e-148
 Identities = 48/58 (82%), Positives = 50/58 (86%), Frame = +3 / +1

Query:     3 GQRRS*EAERQNVIICIFCANLSGGA*EEAPRCFSQLLRVF*EVLREVEGKRA*NMLT 176
             GQRRS*EAERQNV+ICI CANL GGA EEAP CF QLLRVF EVLREVEGKRA  ML+
Sbjct:   175 GQRRS*EAERQNVLICILCANLPGGAQEEAPGCFCQLLRVFQEVLREVEGKRALEMLS 348

 Score = 121 (42.6 bits), Expect = 6.5e-156, Sum P(6) = 6.5e-156
 Identities = 28/49 (57%), Positives = 34/49 (69%), Frame = +1 / +2

Query:  1780 LTV*TCRVLFCIQKVAVSTL*SKSLHSGFNRVRIW*IIAPQ*GITLQIL 1926
             L +*TCR+LFC+QKVAV      +  S   R+R+W IIA Q*GIT QIL
Sbjct:  1688 LWL*TCRMLFCVQKVAVLLFDQSAF*SS*TRIRMWYIIALQ*GITTQIL 1834

  Minus Strand HSPs:

 Score = 399 (140.5 bits), Expect = 3.1e-118, Sum P(5) = 3.1e-118
 Identities = 76/77 (98%), Positives = 76/77 (98%), Frame = -2 / -1

Query:  2574 FHANLQPPYCTRQG*WLLKIPPGQGYLKTHSVVC*LYKKRHCTV*KQILHSLTFQFFSLK 2395
             FHANLQPP CTRQG*WLLKIPPGQGYLKTHSVVC*LYKKRHCTV*KQILHSLTFQFFSLK
Sbjct:  2424 FHANLQPPDCTRQG*WLLKIPPGQGYLKTHSVVC*LYKKRHCTV*KQILHSLTFQFFSLK 2245

Query:  2394 GVSCVQGG*MLYRQEKK 2344
             GVSCVQGG*MLYRQEKK
Sbjct:  2244 GVSCVQGG*MLYRQEKK 2194

 Score = 392 (138.0 bits), Expect = 2.3e-117, Sum P(5) = 2.3e-117
 Identities = 76/77 (98%), Positives = 76/77 (98%), Frame = -3 / -2

Query:  2573 SMPIYNPHTVPGKVSGY*KYHQDRAI*RHIR*CVNYTKKDTVQFKNKSYTALHFNFFL*K 2394
             SMPIYNP TVPGKVSGY*KYHQDRAI*RHIR*CVNYTKKDTVQFKNKSYTALHFNFFL*K
Sbjct:  2423 SMPIYNPQTVPGKVSGY*KYHQDRAI*RHIR*CVNYTKKDTVQFKNKSYTALHFNFFL*K 2244

Query:  2393 E*VVYRGVKCFIDKKKK 2343
             E*VVYRGVKCFIDKKKK
Sbjct:  2243 E*VVYRGVKCFIDKKKK 2193

 Score = 383 (134.8 bits), Expect = 2.9e-116, Sum P(5) = 2.9e-116
 Identities = 76/77 (98%), Positives = 76/77 (98%), Frame = -1 / -3

Query:  2575 FPCQFTTPILYQARLVAIENTTRTGLSKDTFGSVLTIQKKTLYSLKTNLTQPYISIFFFK 2396
             FPCQFTTP LYQARLVAIENTTRTGLSKDTFGSVLTIQKKTLYSLKTNLTQPYISIFFFK
Sbjct:  2425 FPCQFTTPRLYQARLVAIENTTRTGLSKDTFGSVLTIQKKTLYSLKTNLTQPYISIFFFK 2246

Query:  2395 RSELCTGGLNAL*TRKK 2345
             RSELCTGGLNAL*TRKK
Sbjct:  2245 RSELCTGGLNAL*TRKK 2195

 Score = 320 (112.6 bits), Expect = 4.0e-97, Sum P(4) = 4.0e-97
 Identities = 78/106 (73%), Positives = 85/106 (80%), Frame = -3 / -1

Query:  2423 ALHFNFFL*KE*VVYRGVKCFIDKKKKTALEPTYSSSSSSSSSSSSSSSSSSSSSSSSSS 2244
             +L F FF  K     +G      ++KKTALEPTYSSSSSSSSSSSSSSSSSSSSSSSSSS
Sbjct:  2274 SLTFQFFSLKGVSCVQGG*MLYRQEKKTALEPTYSSSSSSSSSSSSSSSSSSSSSSSSSS 2095

Query:  2243 SSSSFFFLLFSALTTPFFAASGFPLARYAAISFQSKGRIKQ*GRKK 2106
             SSSSFFFLLFSALTTPFFAASGFPLA  AAISFQ+K R + * R+K
Sbjct:  2094 SSSSFFFLLFSALTTPFFAASGFPLAL*AAISFQNKER-RM*QRQK 1960

 Score = 311 (109.5 bits), Expect = 3.1e-118, Sum P(5) = 3.1e-118
 Identities = 63/87 (72%), Positives = 73/87 (83%), Frame = -2 / -1

Query:  1152 LLTFSYFSFSFAAFFS*GCLSSAAVLFHISPSFFATSPMDRPGCSPLIFGRYSEQKRKKA 973
             LLTFSYFSFS AAFFS*GCLSSAAVLFHISPSFFATSPMD+PGCSPLI GRYSEQ +KKA
Sbjct:  1191 LLTFSYFSFSLAAFFS*GCLSSAAVLFHISPSFFATSPMDKPGCSPLILGRYSEQNKKKA 1012

Query:   972 ELKKKLILGF*-VNRSQKQILSGVHCIA 892
             ELK ++   F*  N+   Q+ + + C++
Sbjct:  1011 ELKPEMY--F*DFNKLNTQLCTALQCLS 934

 Score = 296 (104.2 bits), Expect = 1.6e-94, Sum P(4) = 1.6e-94
 Identities = 63/109 (57%), Positives = 73/109 (66%), Frame = -2 / -3

Query:  2409 FFSLKGVSCVQGG*MLYRQEKKNCARTNLFIIIIFFFIFIFFIFLLLLILFIFLIFLLFL 2230
             FF  +   C  GG       KKNCARTNLFIIIIFFFIF+F  FLL LILFI L+  LFL
Sbjct:  2257 FFFKRSELCT-GGLNAL*TRKKNCARTNLFIIIIFFFIFVFLFFLLFLILFILLLIFLFL 2081

Query:  2229 LFLAFFSLDNSLFCCIRLSFSSICSNILPKQREDKTVGKKKRLRKEIEH 2083
             LFLA FSLD+ LF CIR SFSS+ SNILPKQ E+     K +  + + +
Sbjct:  2080 LFLALFSLDHPLFRCIRFSFSSVGSNILPKQGEENVTKTKNKTSQSLHN 1934

 Score = 287 (101.0 bits), Expect = 1.4e-93, Sum P(4) = 1.4e-93
 Identities = 62/100 (62%), Positives = 71/100 (71%), Frame = -1 / -2

Query:  2407 FFFKRSELCTGGLNAL*TRKKKLR*NQLIHHHHLLLHLHLLHLPPPPHPLHLP-HLPPLP 2231
             FF  +  +   G+     +KKKLR*NQLIHHHHLLLHL L  LPP PHPLH P HLP LP
Sbjct:  2258 FFL*KE*VVYRGVKCFIDKKKKLR*NQLIHHHHLLLHLRLPLLPPLPHPLHPPPHLP-LP 2082

Query:  2230 SFSCFFQP*QLPFLLHQAFL*LDMQQYPSKAKGG*NSREEK 2108
             SFSC FQP*  PF LHQ FL*L  QQYPSK + G  ++++K
Sbjct:  2081 SFSCSFQP*PPPFSLHQVFL*LCRQQYPSKTRRGECNKDKK 1959

 Score = 286 (100.7 bits), Expect = 3.1e-118, Sum P(5) = 3.1e-118
 Identities = 53/56 (94%), Positives = 55/56 (98%), Frame = -3 / -1

Query:   170 HVLSPLTFHLSEHFLENSEKLTEASGCFFLCSSRQVCTKNAYDDILPLGFLGSPLP 3
             H+ SPLTFHLSEHFLENSEKLTEASGCFFLCSSRQVCTKNAY+DILPLGFLGSPLP
Sbjct:   342 HL*SPLTFHLSEHFLENSEKLTEASGCFFLCSSRQVCTKNAYEDILPLGFLGSPLP 175

 Score = 245 (86.2 bits), Expect = 3.1e-118, Sum P(5) = 3.1e-118
 Identities = 67/136 (49%), Positives = 83/136 (61%), Frame = -3 / -3

Query:   731 SIFQEIKRSKG--DTLGKGDQMSNSNALGTLPPNRNFILFKYNQYEQVLAKKL*LYIYTL 558
             +I ++ KR+K   DTL KG   S       +PP  ++I     + +   AKK      T 
Sbjct:   856 AISKDTKRTKNRSDTLCKGVSFSVQMPSLIIPPILSYIDPSNTRPKPFSAKKP----NTR 689

Query:   557 N*QSSLLNFSQILL*NVSGK*KQ-ARYSRRPLGCIGILELLFCLPFGRDIGFHFSFITGL 381
             +  S+ LN  Q L    + K*K  + YSRRPLGCIG+LELLF LPFG D+GFHFSFIT L
Sbjct:   688 H--STWLN--QFLPTLNNSK*KLISSYSRRPLGCIGVLELLFGLPFGGDVGFHFSFITSL 521

Query:   380 VRFCHIFKFSFLFSRHGLQ 324
             V  CHIFKF   FSRHGL+
Sbjct:   520 VSLCHIFKFPLFFSRHGLE 464

 Score = 237 (83.4 bits), Expect = 2.1e-117, Sum P(5) = 2.1e-117
 Identities = 52/59 (88%), Positives = 54/59 (91%), Frame = -1 / -1

Query:   481 THGGLLGALGSLNFFFVSPLGGI*VFISLS*RALSAFAISSNFPFSLADMVYK--IINL 311
             THGGLLGALGSLNFF VSPLGG+*VFISLS*RALSAFAISSNFPFSLADMV K   +NL
Sbjct:   621 THGGLLGALGSLNFFLVSPLGGM*VFISLS*RALSAFAISSNFPFSLADMV*KELFVNL 445

 Score = 222 (78.1 bits), Expect = 6.2e-109, Sum P(5) = 6.2e-109
 Identities = 50/85 (58%), Positives = 60/85 (70%), Frame = -1 / -3

Query:  1156 HTSYLFVFFLQLRSLLFIRLLVICSSVIPHLSQFLRNITNGQARMFSFDFWAILRAEEEE 977
             H  YL +  LQL S L I LLVIC SV+PHLS FL NITNG ARM +FDF A+LR E+EE
Sbjct:  1195 HPPYLLILLLQLGSFLLIGLLVICCSVVPHLS*FLCNITNG*ARMLAFDFGAVLRTEQEE 1016

Query:   976 GRTKKKINFRILS*QITKTNTIRCT 902
             GRTK + N  +  *Q TK +T+ C+
Sbjct:  1015 GRTKTR-NVLLGF*Q-TKHSTLYCS 947

 Score = 216 (76.0 bits), Expect = 6.4e-111, Sum P(5) = 6.4e-111
 Identities = 46/53 (86%), Positives = 47/53 (88%), Frame = -1 / -2

Query:   160 ALLPSTSLSTS*KTLRS*LKHLGASSYAPPDKFAQKMHMMTFCLSAS*DLLCP 2
             ALLPSTSLSTS KTLRS* KH GASS APP KFAQ+MHM TFCLSAS*DLLCP
Sbjct:   332 ALLPSTSLSTSWKTLRS*QKHPGASSCAPPGKFAQRMHMRTFCLSAS*DLLCP 174

 Score = 153 (53.9 bits), Expect = 3.1e-118, Sum P(5) = 3.1e-118
 Identities = 60/173 (34%), Positives = 82/173 (47%), Frame = -2 / -3

Query:  2310 IFFFIFIFFIFLLLLILFIFLIFLLFLLFLAFFSLDNSLFCCIRLSFSSICSNILPKQRE 2131
             +F  I  FFIF+ L  L   ++F+L L+FL  F L  +LF      F  I  +       
Sbjct:  2176 LFIIIIFFFIFVFLFFLLFLILFILLLIFL--FLLFLALFSLDHPLFRCIRFSF------ 2021

Query:  2130 DKTVGKKKRLRKEIEHGRTL*KKSRF*LYQNITYL*IHSNSRNN*NFNK*T*KYKIIITI 1951
               +VG    L K+ E   T   K++    Q++     H    NN*   K   K  I +  
Sbjct:  2020 -SSVGSNI-LPKQGEENVT---KTKNKTSQSLHNTQAHCTFPNN*TKGK---KGNIKMNN 1865

Query:  1950 YNS*NGIV--*YLQSYASLRCNYLPDPNSIKTRM*RL*LKGRHCHLLNAKKHSTG 1792
               S    +  *YL  YASL+CNY+P PNS    +    +K  +CHLLN K+HSTG
Sbjct:  1864 LQSTTHEMSD*YLCCYASLKCNYIPHPNSSL*GLEGRLIKE*YCHLLNTKQHSTG 1700


>M64986 Rat amphoterin mRNA, complete cds.
        Length = 1225

  Plus Strand HSPs:

 Score = 401 (141.2 bits), Expect = 4.2e-150, Sum P(5) = 4.2e-150
 Identities = 77/79 (97%), Positives = 78/79 (98%), Frame = +1 / +2

Query:  2338 AVFFFLSIKHLTPLYTTHSF*RKKLKCKAV*DLFLNCTVSFFV*LTHYRMCL*IALSWWY 2517
             A FFFLSIKHLTPLYTTHSF*RKKLKCKAV*DLFLNCTVSFFV*LTHYRMCL*+ALSWWY
Sbjct:   782 ACFFFLSIKHLTPLYTTHSF*RKKLKCKAV*DLFLNCTVSFFV*LTHYRMCL*LALSWWY 961

Query:  2518 FQ*PLTLPGTVWGL*IGME 2574
             FQ*PLTLPGTVWGL*IGME
Sbjct:   962 FQ*PLTLPGTVWGL*IGME 1018

 Score = 401 (141.2 bits), Expect = 4.2e-150, Sum P(5) = 4.2e-150
 Identities = 75/77 (97%), Positives = 75/77 (97%), Frame = +2 / +3

Query:  2345 FFSCL*SI*PPCTQLTPFKEKN*NVRLCKICF*TVQCLFLYS*HTTECVFR*PCPGGIFN 2524
             FFSCL*SI*PPCTQLTPFKEKN*NVRLCKICF*TVQCLFLYS*HTTECVF *PCPGGIFN
Sbjct:   789 FFSCL*SI*PPCTQLTPFKEKN*NVRLCKICF*TVQCLFLYS*HTTECVFS*PCPGGIFN 968

Query:  2525 SH*PCLVQYGGCKLAWK 2575
             SH*PCLVQ GGCKLAWK
Sbjct:   969 SH*PCLVQSGGCKLAWK 1019

 Score = 400 (140.8 bits), Expect = 5.4e-150, Sum P(5) = 5.4e-150
 Identities = 76/79 (96%), Positives = 77/79 (97%), Frame = +3 / +1

Query:  2337 RSFFFLVYKAFNPPVHNSLLLKKKIEM*GCVRFVFKLYSVFFCIVNTLPNVSLDSPVLVV 2516
             R FFFLVYKAFNPPVHNSLLLKKKIEM*GCVRFVFKLYSVFFCIVNTLPNVSL SPVLVV
Sbjct:   781 RMFFFLVYKAFNPPVHNSLLLKKKIEM*GCVRFVFKLYSVFFCIVNTLPNVSLASPVLVV 960

Query:  2517 FSIATNLAWYSMGVVNWHG 2573
             FSIATNLAWYS+GVVNWHG
Sbjct:   961 FSIATNLAWYSLGVVNWHG 1017

 Score = 326 (114.8 bits), Expect = 4.2e-150, Sum P(5) = 4.2e-150
 Identities = 64/68 (94%), Positives = 67/68 (98%), Frame = +1 / +3

Query:  2146 KDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE* 2325
             KDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEE+DEEDEEDEEEEE+EEDEDEEEDDDDE*
Sbjct:   591 KDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEDDEEDEEDEEEEEEEEDEDEEEDDDDE* 770

Query:  2326 VGSSAVFF 2349
             VGS+ VFF
Sbjct:   771 VGSTHVFF 794

 Score = 311 (109.5 bits), Expect = 4.2e-150, Sum P(5) = 4.2e-150
 Identities = 58/58 (100%), Positives = 58/58 (100%), Frame = +2 / +3

Query:   971 SAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEK 1144
             SAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEK
Sbjct:   420 SAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEK 593

 Score = 281 (98.9 bits), Expect = 4.2e-150, Sum P(5) = 4.2e-150
 Identities = 51/55 (92%), Positives = 51/55 (92%), Frame = +1 / +3

Query:     1 MGKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKVRGLK 165
             MGKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWK    K
Sbjct:   123 MGKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAK 287

 Score = 265 (93.3 bits), Expect = 4.2e-150, Sum P(5) = 4.2e-150
 Identities = 52/56 (92%), Positives = 52/56 (92%), Frame = +3 / +3

Query:   330 TMSAKEKGKFEDMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPP*VSCLFL 497
             TMSAKEKGKFEDMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPP  S  FL
Sbjct:   273 TMSAKEKGKFEDMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPP--SAFFL 434

 Score = 250 (88.0 bits), Expect = 2.4e-101, Sum P(4) = 2.4e-101
 Identities = 54/87 (62%), Positives = 64/87 (73%), Frame = +2 / +1

Query:  2147 RILLHIELKESLMQQKRELSRLKKARKRRKRRKMRKMKRMRRRRKMKKMKMKKKMMMMNK 2326
             RILL  ELKE+LMQ+KR  SRL++ARKRRKR+  R+MKRMR+RRK +K KMKKKMMMMNK
Sbjct:   592 RILLPTELKENLMQRKRGWSRLRRARKRRKRKTTRRMKRMRKRRKKRKTKMKKKMMMMNK 771

Query:  2327 LVLAQFFFSCL*SI*PPCTQLTPFKEK 2407
             LVL  FFF    +  PP       K+K
Sbjct:   772 LVLRMFFFLVYKAFNPPVHNSLLLKKK 852

 Score = 195 (68.6 bits), Expect = 9.0e-143, Sum P(5) = 9.0e-143
 Identities = 40/55 (72%), Positives = 45/55 (81%), Frame = +2 / +2

Query:   329 DHVC*RERKI*RYGKSGQGPL*KRNENLYPSQRGDKKEVQGSQCTQEASVSILPV 493
             DHVC*R+ +I*RYGK  QG L*KRNENL+P QRGD+KEVQG QC QEAS  +L V
Sbjct:   272 DHVC*RKGEI*RYGKG*QGSL*KRNENLHPPQRGDQKEVQGPQCPQEASFGLLLV 436

 Score = 194 (68.3 bits), Expect = 1.2e-142, Sum P(5) = 1.2e-142
 Identities = 39/55 (70%), Positives = 43/55 (78%), Frame = +1 / +1

Query:   328 RPCLLKRKENLKIWQKRTRPVMKEK*KPISLPKGRQKRSSRIPMHPRGLREYLAC 492
             RPCLLK++ NLKIWQ+ TR VMKEK*KP S PKGR KRSSR PM PRGL    +C
Sbjct:   271 RPCLLKKRGNLKIWQRLTRLVMKEK*KPTSPPKGRPKRSSRTPMPPRGLLRPSSC 435

  Minus Strand HSPs:

 Score = 397 (139.8 bits), Expect = 6.0e-110, Sum P(4) = 6.0e-110
 Identities = 76/79 (96%), Positives = 76/79 (96%), Frame = -2 / -1

Query:  2574 FHANLQPPYCTRQG*WLLKIPPGQGYLKTHSVVC*LYKKRHCTV*KQILHSLTFQFFSLK 2395
             FHANLQPP CTRQG*WLLKIPPGQG LKTHSVVC*LYKKRHCTV*KQILHSLTFQFFSLK
Sbjct:  1018 FHANLQPPDCTRQG*WLLKIPPGQG*LKTHSVVC*LYKKRHCTV*KQILHSLTFQFFSLK 839

Query:  2394 GVSCVQGG*MLYRQEKKNC 2338
             GVSCVQGG*MLYRQEKK C
Sbjct:   838 GVSCVQGG*MLYRQEKKTC 782

 Score = 388 (136.6 bits), Expect = 6.1e-109, Sum P(4) = 6.1e-109
 Identities = 76/79 (96%), Positives = 76/79 (96%), Frame = -3 / -2

Query:  2573 SMPIYNPHTVPGKVSGY*KYHQDRAI*RHIR*CVNYTKKDTVQFKNKSYTALHFNFFL*K 2394
             SMPIYNP TVPGKVSGY*KYHQDRA *RHIR*CVNYTKKDTVQFKNKSYTALHFNFFL*K
Sbjct:  1017 SMPIYNPQTVPGKVSGY*KYHQDRAS*RHIR*CVNYTKKDTVQFKNKSYTALHFNFFL*K 838

Query:  2393 E*VVYRGVKCFIDKKKKTA 2337
             E*VVYRGVKCFIDKKKK A
Sbjct:   837 E*VVYRGVKCFIDKKKKHA 781

 Score = 296 (104.2 bits), Expect = 1.1e-95, Sum P(4) = 1.1e-95
 Identities = 70/93 (75%), Positives = 75/93 (80%), Frame = -3 / -1

Query:  2423 ALHFNFFL*KE*VVYRGVKCFIDKKKKTALEPTYSSSSSSSSSSSSSSSSSSSSSSSSSS 2244
             +L F FF  K     +G      ++KKT +EPTYSSSSSSSSSSSSSSSSSSSSSSSSSS
Sbjct:   868 SLTFQFFSLKGVSCVQGG*MLYRQEKKTCVEPTYSSSSSSSSSSSSSSSSSSSSSSSSSS 689

Query:  2243 SSSSFFFLLFSALTTPFFAASGFPLARYAAISF 2145
             SSSSFFFLLFSALTTPFFAASGFPLA  AAISF
Sbjct:   688 SSSSFFFLLFSALTTPFFAASGFPLAL*AAISF 590

 Score = 286 (100.7 bits), Expect = 6.0e-110, Sum P(4) = 6.0e-110
 Identities = 54/60 (90%), Positives = 58/60 (96%), Frame = -2 / -1

Query:  1149 LTFSYFSFSFAAFFS*GCLSSAAVLFHISPSFFATSPMDRPGCSPLIFGRYSEQKRKKAE 970
             ++FSYFSFS AAFFS*GCLSSAAVLFHISPSFFATSPMD+PGCSPLIFGRYSEQ +KKAE
Sbjct:   598 ISFSYFSFSLAAFFS*GCLSSAAVLFHISPSFFATSPMDKPGCSPLIFGRYSEQNKKKAE 419

 Score = 267 (94.0 bits), Expect = 6.0e-110, Sum P(4) = 6.0e-110
 Identities = 49/54 (90%), Positives = 52/54 (96%), Frame = -3 / -1

Query:   164 LSPLTFHLSEHFLENSEKLTEASGCFFLCSSRQVCTKNAYDDILPLGFLGSPLP 3
             L+ + FHLSEHFLENSEKLTEASGCFFLCSSRQVCTKNAY+DILPLGFLGSPLP
Sbjct:   286 LADMVFHLSEHFLENSEKLTEASGCFFLCSSRQVCTKNAYEDILPLGFLGSPLP 125

 Score = 252 (88.7 bits), Expect = 5.9e-89, Sum P(4) = 5.9e-89
 Identities = 54/88 (61%), Positives = 58/88 (65%), Frame = -1 / -2

Query:  2407 FFFKRSELCTGGLNAL*TRKKKLR*NQLIHHHHLLLHLHLLHLPPPPHPLHLPHLPPLPS 2228
             FF  +  +   G+     +KKK  *NQLIHHHHLLLHL L  LPP PHPLH P   PLPS
Sbjct:   852 FFL*KE*VVYRGVKCFIDKKKKHA*NQLIHHHHLLLHLRLPLLPPLPHPLHPPRRLPLPS 673

Query:  2227 FSCFFQP*QLPFLLHQAFL*LDMQQYPS 2144
             FSC  QP*  PF LHQ FL*L  QQYPS
Sbjct:   672 FSCSSQP*PPPFSLHQVFL*LCRQQYPS 589

 Score = 234 (82.4 bits), Expect = 6.0e-110, Sum P(4) = 6.0e-110
 Identities = 48/59 (81%), Positives = 54/59 (91%), Frame = -1 / -1

Query:   496 KNRQDTHGGLLGALGSLNFFFVSPLGGI*VFISLS*RALSAFAISSNFPFSLADMVYKI 320
             +N++   GGLLGALGSLNFF VSPLGG+*VFISLS*RALSAFAISSNFPFSLADMV+ +
Sbjct:   439 QNKKKAEGGLLGALGSLNFFLVSPLGGM*VFISLS*RALSAFAISSNFPFSLADMVFHL 263

 Score = 191 (67.2 bits), Expect = 5.5e-102, Sum P(4) = 5.5e-102
 Identities = 40/49 (81%), Positives = 43/49 (87%), Frame = -1 / -2

Query:   148 STSLSTS*KTLRS*LKHLGASSYAPPDKFAQKMHMMTFCLSAS*DLLCP 2
             STSLSTS +TLRS* KH GASS APP +FAQ+MHM TFCLSAS*DLLCP
Sbjct:   270 STSLSTSWRTLRS*QKHPGASSCAPPGRFAQRMHMRTFCLSAS*DLLCP 124

Parameters:

  ctxfactor=36.0
  E=10

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   Std.    0   BLOSUM62                                 0.318   0.135   0.401  
   +3      0   BLOSUM62        0.318   0.135   0.401    0.374   0.168   0.632  
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a
   +2      0   BLOSUM62        0.318   0.135   0.401    0.357   0.161   0.556  
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a
   +1      0   BLOSUM62        0.318   0.135   0.401    0.358   0.161   0.586  
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a
   -1      0   BLOSUM62        0.318   0.135   0.401    0.357   0.159   0.555  
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a
   -2      0   BLOSUM62        0.318   0.135   0.401    0.361   0.163   0.576  
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a
   -3      0   BLOSUM62        0.318   0.135   0.401    0.352   0.155   0.521  
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E    S W   T  X   E2     S2
   +3      0      857       857       10.  85 3  13 22  0.041   39
                                                    37  0.049   43
   +2      0      858       858       10.  85 3  13 22  0.041   39
                                                    37  0.049   43
   +1      0      858       858       10.  85 3  13 22  0.041   39
                                                    37  0.049   43
   -1      0      858       858       10.  85 3  13 22  0.041   39
                                                    37  0.049   43
   -2      0      858       858       10.  85 3  13 22  0.041   39
                                                    37  0.049   43
   -3      0      857       857       10.  85 3  13 22  0.041   39
                                                    37  0.049   43


Statistics:

  Database:  /dbEST1/wublast/database/embl/embl.fas
    Title:  embl
    Release date:  unknown
    Posted date:  12:04 PM GMT Feb 21, 2000
    Format:  BLAST
  # of letters in database:  675,252,082
  # of sequences in database:  442,729
  # of database sequences satisfying E:  1079
  No. of states in DFA:  597 (63 KB)
  Total size of DFA:  420 KB (448 KB)
  Time to generate neighborhood:  0.04u 0.01s 0.05t  Elapsed: 00:00:00
  No. of threads or processors used:  2
  Search cpu time:  6765.31u 1.35s 6766.66t  Elapsed: 00:58:27
  Total cpu time:  6766.26u 1.54s 6767.80t  Elapsed: 00:58:28
  Start:  Mon Feb 21 12:17:43 2000   End:  Mon Feb 21 13:16:11 2000

WARNINGS ISSUED:  2
