BLASTN 2.0a19MP-WashU [05-Feb-1998] [Build sol2.5-ultra 01:47:25 05-Feb-1998]

Reference:  Gish, Warren (1994-1997).  unpublished.
Altschul, Stephen F., Warren Gish, Webb Miller, Eugene W. Myers, and David J.
Lipman (1990).  Basic local alignment search tool.  J. Mol. Biol. 215:403-10.

Notice:  this program and its default parameter settings are optimized to find
nearly identical sequences rapidly.  To identify weak similarities encoded in
nucleic acid, use BLASTX, TBLASTN or TBLASTX.

Query=  U51677
        (2575 letters)

Database:  embl
           442,729 sequences; 675,252,082 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

U51677 Human non-histone chromatin protein HMG1 (HMG1) ge... 12875  0.0       1
X80457 M.musculus HMG1 gene                                   2065  1.8e-198  5
X12597 Human mRNA for high mobility group-1 protein (HMG-1).  2131  7.7e-193  4
D63874 Human mRNA for HMG-1, complete cds.                    2123  6.2e-191  4


>U51677 Human non-histone chromatin protein HMG1 (HMG1) gene, complete cds.
        Length = 2575

  Plus Strand HSPs:

 Score = 12875 (1931.8 bits), Expect = 0.0, P = 0.0
 Identities = 2575/2575 (100%), Positives = 2575/2575 (100%), Strand = Plus / Plus

Query:     1 ATGGGCAAAGGAGATCCTAAGAAGCCGAGAGGCAAAATGTCATCATATGCATTTTTTGTG 60
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:     1 ATGGGCAAAGGAGATCCTAAGAAGCCGAGAGGCAAAATGTCATCATATGCATTTTTTGTG 60

Query:    61 CAAACTTGTCGGGAGGAGCATAAGAAGAAGCACCCAGATGCTTCAGTCAACTTCTCAGAG 120
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:    61 CAAACTTGTCGGGAGGAGCATAAGAAGAAGCACCCAGATGCTTCAGTCAACTTCTCAGAG 120

Query:   121 TTTTCTAAGAAGTGCTCAGAGAGGTGGAAGGTAAGAGGGCTTAAAACATGCTAACAAGGT 180
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:   121 TTTTCTAAGAAGTGCTCAGAGAGGTGGAAGGTAAGAGGGCTTAAAACATGCTAACAAGGT 180

Query:   181 AATTAAAAGACAGTTTCCAATTGAGGATGCAAAAAAAAGCCTAGTTGGCATTCTCGTAGT 240
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:   181 AATTAAAAGACAGTTTCCAATTGAGGATGCAAAAAAAAGCCTAGTTGGCATTCTCGTAGT 240

Query:   241 GGGACGCTATTACATAGCAAAAGACATTGGTTTTGAGGATAATTTACTTAAATGTTACAA 300
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:   241 GGGACGCTATTACATAGCAAAAGACATTGGTTTTGAGGATAATTTACTTAAATGTTACAA 300

Query:   301 CTTAAACTTACAAATTAATTATTTTGTAGACCATGTCTGCTAAAGAGAAAGGAAAATTTG 360
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:   301 CTTAAACTTACAAATTAATTATTTTGTAGACCATGTCTGCTAAAGAGAAAGGAAAATTTG 360

Query:   361 AAGATATGGCAAAAGCGGACAAGGCCCGTTATGAAAGAGAAATGAAAACCTATATCCCTC 420
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:   361 AAGATATGGCAAAAGCGGACAAGGCCCGTTATGAAAGAGAAATGAAAACCTATATCCCTC 420

Query:   421 CCAAAGGGGAGACAAAAAAGAAGTTCAAGGATCCCAATGCACCCAAGAGGCCTCCGTGAG 480
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:   421 CCAAAGGGGAGACAAAAAAGAAGTTCAAGGATCCCAATGCACCCAAGAGGCCTCCGTGAG 480

Query:   481 TATCTTGCCTGTTTTTACTTCCCAGACACGTTTTACAGTAGAATCTGAGAGAAATTTAGC 540
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:   481 TATCTTGCCTGTTTTTACTTCCCAGACACGTTTTACAGTAGAATCTGAGAGAAATTTAGC 540

Query:   541 AAGCTACTTTGTCAGTTTAGAGTGTAAATGTACAATCAAAGTTTCTTAGCTAATACTTGT 600
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:   541 AAGCTACTTTGTCAGTTTAGAGTGTAAATGTACAATCAAAGTTTCTTAGCTAATACTTGT 600

Query:   601 TCATATTGGTTATATTTAAATAGTATAAAATTCCTGTTGGGTGGGAGTGTTCCCAGAGCA 660
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:   601 TCATATTGGTTATATTTAAATAGTATAAAATTCCTGTTGGGTGGGAGTGTTCCCAGAGCA 660

Query:   661 TTTGAATTAGACATTTGGTCTCCTTTGCCCAGTGTATCTCCTTTTGATCTTTTTATTTCT 720
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:   661 TTTGAATTAGACATTTGGTCTCCTTTGCCCAGTGTATCTCCTTTTGATCTTTTTATTTCT 720

Query:   721 TGAAAAATACTATCCCTTTGAAATAGTGTAATTGTAGAATGTTCATCTAGGGTTCTAGCT 780
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:   721 TGAAAAATACTATCCCTTTGAAATAGTGTAATTGTAGAATGTTCATCTAGGGTTCTAGCT 780

Query:   781 AGTATAAATTAAATAGTTGTAAATTAAGCTTTGGTTGTGAAGGATATTTAGTATATTATA 840
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:   781 AGTATAAATTAAATAGTTGTAAATTAAGCTTTGGTTGTGAAGGATATTTAGTATATTATA 840

Query:   841 GTATTTGCACCCTGTCCAATGCATCACAGAAATTCACAGGCAGCTTTAAATAGCAATGCA 900
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:   841 GTATTTGCACCCTGTCCAATGCATCACAGAAATTCACAGGCAGCTTTAAATAGCAATGCA 900

Query:   901 GTGTACACCTGATAGTATTTGTTTTTGTGATCTGTTAACTTAAAATCCTAAAATTAATTT 960
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:   901 GTGTACACCTGATAGTATTTGTTTTTGTGATCTGTTAACTTAAAATCCTAAAATTAATTT 960

Query:   961 TTTTTTTAGTTCGGCCTTCTTCCTCTTCTGCTCTGAGTATCGCCCAAAAATCAAAGGAGA 1020
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:   961 TTTTTTTAGTTCGGCCTTCTTCCTCTTCTGCTCTGAGTATCGCCCAAAAATCAAAGGAGA 1020

Query:  1021 ACATCCTGGCCTGTCCATTGGTGATGTTGCGAAGAAACTGGGAGAGATGTGGAATAACAC 1080
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:  1021 ACATCCTGGCCTGTCCATTGGTGATGTTGCGAAGAAACTGGGAGAGATGTGGAATAACAC 1080

Query:  1081 TGCTGCAGATGACAAGCAGCCTTATGAAAAGAAGGCTGCGAAGCTGAAGGAAAAATACGA 1140
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:  1081 TGCTGCAGATGACAAGCAGCCTTATGAAAAGAAGGCTGCGAAGCTGAAGGAAAAATACGA 1140

Query:  1141 AAAGGTAAGAAGTGTGGGTTTGCTTGGTAAAATGATGACAAGTACGCCAGATGTATGATT 1200
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:  1141 AAAGGTAAGAAGTGTGGGTTTGCTTGGTAAAATGATGACAAGTACGCCAGATGTATGATT 1200

Query:  1201 GTACTTAGTTTGAGGTGTAATAAGTTTTTAGGGTAACAGCTACATTAAGTATGGTGTTGA 1260
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:  1201 GTACTTAGTTTGAGGTGTAATAAGTTTTTAGGGTAACAGCTACATTAAGTATGGTGTTGA 1260

Query:  1261 TATAAGTCCTCATCCTTCAAAGAATGCAGAGGACCAAATAAATTAGGGTTTTTTTGACTA 1320
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:  1261 TATAAGTCCTCATCCTTCAAAGAATGCAGAGGACCAAATAAATTAGGGTTTTTTTGACTA 1320

Query:  1321 AAATGTAATCAGACTCAGACAAAGGCTGTGTACATTTATGTTGGTTTTGTTATTCCCCAG 1380
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:  1321 AAATGTAATCAGACTCAGACAAAGGCTGTGTACATTTATGTTGGTTTTGTTATTCCCCAG 1380

Query:  1381 TATCTTGAAGTTCATGAAAATGTTGGTAGTCACTTCAAGTCAAAAATGAGCATTTTCAAA 1440
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:  1381 TATCTTGAAGTTCATGAAAATGTTGGTAGTCACTTCAAGTCAAAAATGAGCATTTTCAAA 1440

Query:  1441 TGGCTTGGCATACAGTACAAAAACAGGCTAGACAAAGTAATATAGGCTATATTTTTCTTA 1500
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:  1441 TGGCTTGGCATACAGTACAAAAACAGGCTAGACAAAGTAATATAGGCTATATTTTTCTTA 1500

Query:  1501 GTCATATCCTGAAACATTTATGTTCTTTTCCTTTAGATACTCAAAAAACCACAGCATCAC 1560
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:  1501 GTCATATCCTGAAACATTTATGTTCTTTTCCTTTAGATACTCAAAAAACCACAGCATCAC 1560

Query:  1561 TAAGTTAAATTACAAGTCTGCTGCTCTGTCCAGTAAATTAATAAGATTAAGGAAATCTAT 1620
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:  1561 TAAGTTAAATTACAAGTCTGCTGCTCTGTCCAGTAAATTAATAAGATTAAGGAAATCTAT 1620

Query:  1621 AACTCTTATAGTTCAGTAAATTGAAATATTAAATACTTAATTTTCAGCTTTAGTCATTCT 1680
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:  1621 AACTCTTATAGTTCAGTAAATTGAAATATTAAATACTTAATTTTCAGCTTTAGTCATTCT 1680

Query:  1681 GAAAAGTGTTTATTTCTAGATGTTTCTTAACCTAATTGCATGTTTATTGACAAATTACCT 1740
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:  1681 GAAAAGTGTTTATTTCTAGATGTTTCTTAACCTAATTGCATGTTTATTGACAAATTACCT 1740

Query:  1741 TTTTTTTTTAAGACCACATTTCCTACTAAGGATTAAGGTCTGACAGTGTAAACCTGTAGA 1800
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:  1741 TTTTTTTTTAAGACCACATTTCCTACTAAGGATTAAGGTCTGACAGTGTAAACCTGTAGA 1800

Query:  1801 GTGCTTTTTTGCATTCAGAAGGTGGCAGTGTCTACCCTTTAATCAAAGTCTCTACATTCT 1860
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:  1801 GTGCTTTTTTGCATTCAGAAGGTGGCAGTGTCTACCCTTTAATCAAAGTCTCTACATTCT 1860

Query:  1861 GGTTTTAATAGAGTTAGGATCTGGTAGATAATTGCACCTCAATGAGGCATAACTTTGCAA 1920
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:  1861 GGTTTTAATAGAGTTAGGATCTGGTAGATAATTGCACCTCAATGAGGCATAACTTTGCAA 1920

Query:  1921 ATATTAGACTATGCCATTTCATGAGTTATAGATTGTTATAATGATCTTGTATTTTTATGT 1980
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:  1921 ATATTAGACTATGCCATTTCATGAGTTATAGATTGTTATAATGATCTTGTATTTTTATGT 1980

Query:  1981 TCATTTATTGAAGTTCTAGTTATTTCTGGAGTTGCTGTGGATCTACAGATACGTGATATT 2040
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:  1981 TCATTTATTGAAGTTCTAGTTATTTCTGGAGTTGCTGTGGATCTACAGATACGTGATATT 2040

Query:  2041 TTGGTATAACTAGAATCTTGATTTCTTTCATAAAGTTCTGCCATGTTCTATTTCTTTCCT 2100
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:  2041 TTGGTATAACTAGAATCTTGATTTCTTTCATAAAGTTCTGCCATGTTCTATTTCTTTCCT 2100

Query:  2101 TAATCTTTTTTTCTTCCCTACTGTTTTATCCTCCCTTTGCTTTGGAAGGATATTGCTGCA 2160
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:  2101 TAATCTTTTTTTCTTCCCTACTGTTTTATCCTCCCTTTGCTTTGGAAGGATATTGCTGCA 2160

Query:  2161 TATCGAGCTAAAGGAAAGCCTGATGCAGCAAAAAAGGGAGTTGTCAAGGCTGAAAAAAGC 2220
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:  2161 TATCGAGCTAAAGGAAAGCCTGATGCAGCAAAAAAGGGAGTTGTCAAGGCTGAAAAAAGC 2220

Query:  2221 AAGAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAA 2280
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:  2221 AAGAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGAGGAGGAGGAA 2280

Query:  2281 GATGAAGAAGATGAAGATGAAGAAGAAGATGATGATGATGAATAAGTTGGTTCTAGCGCA 2340
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:  2281 GATGAAGAAGATGAAGATGAAGAAGAAGATGATGATGATGAATAAGTTGGTTCTAGCGCA 2340

Query:  2341 GTTTTTTTTTTCTTGTCTATAAAGCATTTAACCCCCCTGTACACAACTCACTCCTTTTAA 2400
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:  2341 GTTTTTTTTTTCTTGTCTATAAAGCATTTAACCCCCCTGTACACAACTCACTCCTTTTAA 2400

Query:  2401 AGAAAAAAATTGAAATGTAAGGCTGTGTAAGATTTGTTTTTAAACTGTACAGTGTCTTTT 2460
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:  2401 AGAAAAAAATTGAAATGTAAGGCTGTGTAAGATTTGTTTTTAAACTGTACAGTGTCTTTT 2460

Query:  2461 TTTGTATAGTTAACACACTACCGAATGTGTCTTTAGATAGCCCTGTCCTGGTGGTATTTT 2520
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:  2461 TTTGTATAGTTAACACACTACCGAATGTGTCTTTAGATAGCCCTGTCCTGGTGGTATTTT 2520

Query:  2521 CAATAGCCACTAACCTTGCCTGGTACAGTATGGGGGTTGTAAATTGGCATGGAAA 2575
             |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:  2521 CAATAGCCACTAACCTTGCCTGGTACAGTATGGGGGTTGTAAATTGGCATGGAAA 2575


>X80457 M.musculus HMG1 gene
        Length = 2547

  Plus Strand HSPs:

 Score = 2065 (309.8 bits), Expect = 1.8e-198, Sum P(5) = 1.8e-198
 Identities = 449/482 (93%), Positives = 449/482 (93%), Strand = Plus / Plus

Query:  2094 CTTTCCTTAATCTTTTTTTCTTCCCTACTGTTTTATCCTCC-CT--TTGCTTTGGAAGGA 2150
             CTTT  T AA  TTT TTT TT  CT  TGTT  AT CTCC CT  TTG TTTGGAAGGA
Sbjct:  1944 CTTTG-TGAAGTTTTATTTTTTGTCTT-TGTTACATTCTCCTCTCCTTGTTTTGGAAGGA 2001

Query:  2151 TATTGCTGCATATCGAGCTAAAGGAAAGCCTGATGCAGCAAAAAAGGGAGTTGTCAAGGC 2210
             TATTGCTGC TA  GAGCTAAAGGAAA CCTGATGCAGC AAAAAGGG GT GTCAAGGC
Sbjct:  2002 TATTGCTGCCTACAGAGCTAAAGGAAAACCTGATGCAGCGAAAAAGGGGGTGGTCAAGGC 2061

Query:  2211 TGAAAAAAGCAAGAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGATGAGGA 2270
             TGAAAA AGCAAGAAAAAGAAGGAAGAGGA GA GA GAGGA GATGAAGAGGATGAGGA
Sbjct:  2062 TGAAAAGAGCAAGAAAAAGAAGGAAGAGGAAGATGAGGAGGAGGATGAAGAGGATGAGGA 2121

Query:  2271 GGAGGAGGAAGATGAAGAAGATGAAGATGAAGAAGAAGATGATGATGATGAATAAGTTGG 2330
              GAGGAGGAAGA GA GAAGA GAAGATGAAGAAGAAGATGATGATGATGAATAAGTTGG
Sbjct:  2122 AGAGGAGGAAGAAGAGGAAGACGAAGATGAAGAAGAAGATGATGATGATGAATAAGTTGG 2181

Query:  2331 TTCTAGCGCAGTTTTTTTTTTCTTGTCTATAAAGCATTTAACCCCCCTGTACACAACTCA 2390
             TTCTAGCGCAGTTTTTTTTT CTTGTCTATAAAGCATTTAACCCCCCTGTACACAACTCA
Sbjct:  2182 TTCTAGCGCAGTTTTTTTTT-CTTGTCTATAAAGCATTTAACCCCCCTGTACACAACTCA 2240

Query:  2391 CTCCTTTTAAAGAAAAAAATTGAAATGTAAGGCTGTGTAAGATTTGTTTTTAAACTGTAC 2450
             CTCCTTTTAAAGAAAAAAATTGAAATGTAAGGCTGTGTAAGATTTGTTTTTAAACTGTAC
Sbjct:  2241 CTCCTTTTAAAGAAAAAAATTGAAATGTAAGGCTGTGTAAGATTTGTTTTTAAACTGTAC 2300

Query:  2451 AGTGTCTTTTTTTGTATAGTTAACACACTACCGAATGTGTCTTTAGATAGCCCTGTCCTG 2510
             AGTGTCTTTTTTTGTATAGTTAACACACTACCGAATGTGTCTTTAGATAGCCCTGTCCTG
Sbjct:  2301 AGTGTCTTTTTTTGTATAGTTAACACACTACCGAATGTGTCTTTAGATAGCCCTGTCCTG 2360

Query:  2511 GTGGTATTTTCAATAGCCACTAACCTTGCCTGGTACAGTATGGGGGTTGTAAATTGGCAT 2570
             GTGGTATTTTCAATAGCCACTAACCTTGCCTGGTACAGT TGGGGGTTGTAAATTGGCAT
Sbjct:  2361 GTGGTATTTTCAATAGCCACTAACCTTGCCTGGTACAGTCTGGGGGTTGTAAATTGGCAT 2420

Query:  2571 GGAAA 2575
             GGAAA
Sbjct:  2421 GGAAA 2425

 Score = 871 (130.7 bits), Expect = 1.8e-198, Sum P(5) = 1.8e-198
 Identities = 337/480 (70%), Positives = 337/480 (70%), Strand = Plus / Plus

Query:   797 TTGTAAATTAAGCTTTGGTTGTGAAGGATATTTAGTATATTATAGTATTTGCACCC-TGT 855
             TTGTA  TT AG   T G T   AA  A ATTTAG AT TT T G AT TG A    TGT
Sbjct:   838 TTGTATCTTTAGAAATTGCTCAAAACTA-ATTTAGAATGTTTT-GCATCTGTATATATGT 895

Query:   856 CC-AATGCATCACAGAAATTCACAGGC-A-GCTTTAAATAGCA-ATGCAGTGTACACCTG 911
             C  AATG  T ACA    T C CA  C A G T T AAT  C  A  CA TG A A C G
Sbjct:   896 CTGAATGTTT-ACACCC-TGCCCATACTATGGTATGAATTACTTAAACACTGCAGAGCAG 953

Query:   912 ATAGTATTTGTTTTTGTGATCTGTTAACTTAAAATCCTAAAATTA-ATTTTTT-TTTTAG 969
              TA  A   GTT   GTG T  GTT   TTAAAATCCTAAAA TA ATTT T  TTTTAG
Sbjct:   954 -TAC-AGA-GTTGA-GTGTTTAGTTTG-TTAAAATCCTAAAAGTACATTTCTGGTTTTAG 1008

Query:   970 TTCGGCCTTCTTCCTCTTCTGCTCTGAGTATCGCCCAAAAATCAAAGGAGAACATCCTGG 1029
             TTCGGCCTTCTTC T TTCTG TCTGAGTA CGCCC AAAATCAAAGG GA CATCCTGG
Sbjct:  1009 TTCGGCCTTCTTCTTGTTCTGTTCTGAGTACCGCCCCAAAATCAAAGGCGAGCATCCTGG 1068

Query:  1030 CCTGTCCATTGGTGATGTTGCGAAGAAACTGGGAGAGATGTGGAATAACACTGCTGCAGA 1089
             C T TCCATTGGTGATGTTGC AAGAAACT GGAGAGATGTGGAA AACACTGC GCAGA
Sbjct:  1069 CTTATCCATTGGTGATGTTGCAAAGAAACTAGGAGAGATGTGGAACAACACTGCAGCAGA 1128

Query:  1090 TGACAAGCAGCCTTATGAAAAGAAGGCTGCGAAGCTGAAGGAAAAATACGAAAAGGTAAG 1149
             TGACAAGCAGCC TATGA AAGAA GCTGC AAGCTGAAGGA AA TA GA AAGGTAAG
Sbjct:  1129 TGACAAGCAGCCCTATGAGAAGAAAGCTGCCAAGCTGAAGGAGAAGTATGAGAAGGTAAG 1188

Query:  1150 AAGTGTG---GGTTTGCTTG-GTAAAATGATGACAAGTACGCCAGAT-GTATGATTGTA- 1203
              AG  TG   GG T  C  G GT A   GAT A A  T  G  A  T GT T ATT    
Sbjct:  1189 GAGGATGACAGGATACCCAGTGTTAGGGGATTATACTT--GATAACTCGTCTTATTTCCT 1246

Query:  1204 CTTAGTTTG-AGGTGTAATAAGTTTT--TAGGGTAACAGCTAC-ATTAAGTATGGTGTTG 1259
             CTT GTTTG AGG  T  T  GTTTT  TA  G AAC GC A  A T  GT   GT TT 
Sbjct:  1247 CTTTGTTTGCAGGCTTCGTT-GTTTTCATACAGGAACGGCCAATAGTGTGTTCAGTTTTC 1305

Query:  1260 ATATAAGTCCTCAT 1273
              TATAA TC T AT
Sbjct:  1306 CTATAA-TC-TGAT 1317

 Score = 771 (115.7 bits), Expect = 1.8e-198, Sum P(5) = 1.8e-198
 Identities = 163/174 (93%), Positives = 163/174 (93%), Strand = Plus / Plus

Query:     1 ATGGGCAAAGGAGATCCTAAGAAGCCGAGAGGCAAAATGTCATCATATGCATTTTTTGTG 60
             ||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||
Sbjct:   173 ATGGGCAAAGGAGATCCTAAGAAGCCGAGAGGCAAAATGTCCTCATATGCATTCTTTGTG 232

Query:    61 CAAACTTGTCGGGAGGAGCATAAGAAGAAGCACCCAGATGCTTCAGTCAACTTCTCAGAG 120
             |||||||| ||||||||||| |||||||||||||| |||||||| |||||||||||||||
Sbjct:   233 CAAACTTGCCGGGAGGAGCACAAGAAGAAGCACCCGGATGCTTCTGTCAACTTCTCAGAG 292

Query:   121 TTTTCTAAGAAGTGCTCAGAGAGGTGGAAGGTAAGAGGGCTTAAAACATGCTAA 174
             ||||| |||||||||||||||||||||||||||||||||||| | | ||||| |
Sbjct:   293 TTTTCCAAGAAGTGCTCAGAGAGGTGGAAGGTAAGAGGGCTTTAGAGATGCTGA 346

 Score = 754 (113.1 bits), Expect = 1.8e-198, Sum P(5) = 1.8e-198
 Identities = 228/293 (77%), Positives = 228/293 (77%), Strand = Plus / Plus

Query:   250 TTAC-ATAGCAAAAG-ACATTGGTTTTGAGGATAATTTACTTAA-ATGTTACAACTTAAA 306
             TTAC ATA  A  A  A A TG TTT  AGG T    TA T AA AT T   A  T AA 
Sbjct:   392 TTACTATATGACTATTAAAGTGCTTT--AGGCTGGCATATTGAACATCTCT-ATGTCAAG 448

Query:   307 CTTACAAATTAATTATTTTGTAGACCATGTCTGCTAAAGAGAAAGGAAAATTTGAAGATA 366
              TTACAAAT AATT TTT  TAGACCATGTCTGCTAAAGA AA GG AAATTTGAAGATA
Sbjct:   449 TTTACAAAT-AATTCTTTC-TAGACCATGTCTGCTAAAGAAAAGGGGAAATTTGAAGATA 506

Query:   367 TGGCAAAAGCGGACAAGGCCCGTTATGAAAGAGAAATGAAAACCTATATCCCTCCCAAAG 426
             TGGCAAA GC GACAAGGC CGTTATGAAAGAGAAATGAAAACCTA ATCCC CCCAAAG
Sbjct:   507 TGGCAAAGGCTGACAAGGCTCGTTATGAAAGAGAAATGAAAACCTACATCCCCCCCAAAG 566

Query:   427 GGGAGACAAAAAAGAAGTTCAAGGATCCCAATGCACCCAAGAGGCCTCCGTGAGTAT--- 483
             GGGAGAC AAAAAGAAGTTCAAGGA CCCAATGCACCCAAGAGGCCTCCGTGAGTAT   
Sbjct:   567 GGGAGACCAAAAAGAAGTTCAAGGACCCCAATGCACCCAAGAGGCCTCCGTGAGTATGAG 626

Query:   484 CTTGCCTGTTTTTACTTCCCAGACACGTTTTACAGTAGAATCTGAGAGAAATTTAGCAA 542
             CTT    G TTTTA TT   AG    GTTT A AGTAG  T  GA A   ATT AGC A
Sbjct:   627 CTTATGAGCTTTTATTTTG-AGTT--GTTT-AGAGTAGG-TAGGA-ATTGATTGAGCCA 679

 Score = 715 (107.3 bits), Expect = 3.1e-117, Sum P(5) = 3.1e-117
 Identities = 453/723 (62%), Positives = 453/723 (62%), Strand = Plus / Plus

Query:  1545 AAAACCACAGCA-TCACTAAGTT-AAATTACAAGTCTGCTGCTCTGTCCAGTAAATTAAT 1602
             AAA   AC G A T  CTA GT  AAATTA  A T TG T C CT T  A TAAA TAA 
Sbjct:  1451 AAAGTAACTGTACTGCCTATGTGCAAATTATTA-TATGTT-CACTTTGGATTAAAATAAA 1508

Query:  1603 AA-GATTAAGGA--AATCTATAACTCT-TATAGT-TCAGTA-AATTGA--AATATTAAAT 1654
             A  G TTAA     AA CT T  C    TA A T TCA TA AAT GA  AA ATT  A 
Sbjct:  1509 ATTGCTTAAACTTTAAGCT-TGCCAAGGTA-ACTGTCATTAGAATGGAGGAAAATTGTA- 1565

Query:  1655 ACTTAATTTTCAGCT-TTAGTCATTCTGAAAAG-TGTTTATTTCTAGATGTTTCTTAACC 1712
             A TT  T T CA    TTA   AT C  AAAAG T  TT TTT T GA GT   TT   C
Sbjct:  1566 A-TTCGTATACATAAATTAAA-ATACCTAAAAGCTAATT-TTTGTTGAGGTAATTTTTTC 1622

Query:  1713 T-AAT-TGCATGTTTATTGACAAATTACCTTTTTTTTTTAAGACCACATTTCCTACTAAG 1770
             T AA  TG  T TTT TT A A A  AC          T    CCA  TTTC T CT  G
Sbjct:  1623 TGAAAATGTCTATTTTTTTAGATAC-ACACCCCCAACCTCCCCCCAGTTTTCTT-CTGTG 1680

Query:  1771 GATTAAGGTCTGACAGTGTAAACCTGTAGAGTGCTTTTTTGCATTCAGAAGGTGGCAGTG 1830
             GATTAA  TCTG C GTG  AACCTGTAGA TGCT TTTTG  TTCAGAAGGTGGCAGT 
Sbjct:  1681 GATTAAACTCTGGCTGTG--AACCTGTAGAATGCTGTTTTGTGTTCAGAAGGTGGCAGTA 1738

Query:  1831 TCTACCCTTTAATCAAAGTCTCTAC-ATTCTGGTTTTAATAGAGTTAGGATCTGGTAGAT 1889
             T TAC CTTT ATCA   T  CT C A TC    T  A TAGA TTAGGAT TGGTA AT
Sbjct:  1739 T-TACTCTTTGATCAGTCTGCCTTCTAGTCCTCATAAACTAGAATTAGGATGTGGTATAT 1797

Query:  1890 AATTGCACCTCAATGAGGCATAACTTTGCAAATATTAGACTATGCCATTTCATGAGTTAT 1949
             AATTGCAC TCA TGAGGCATAAC    CAAATATTAG CT  G CATTTCATGAGTT T
Sbjct:  1798 AATTGCACTTCAGTGAGGCATAACAACACAAATATTAGTCT--GACATTTCATGAGTTGT 1855

Query:  1950 AGATTGTTATAATGATCTTGTATTTTTATGTT-CATTTATTGAAGTT---CTAGTTATTT 2005
             AGATTG  A AAT  T TT  ATTTTTATGTT C TTT TT    TT   CTA TTATTT
Sbjct:  1856 AGATTGC-A-AAT--TGTTC-ATTTTTATGTTGCCTTTTTTTCCCTTGGTCTAATTATTT 1910

Query:  2006 CTGGAGTTGCTGTGGATCTACAGATACGTG-ATATTTTGGTATAACTAGAATCTTGATTT 2064
               G AG T C  TGG  CT     T  GTG A A TTTG T  AA T   AT TT  T T
Sbjct:  1911 GGGAAGGTACAATGGGCCTGTGTGTT-GTGGAGACTTTG-TG-AAGTTTTATTTTT-TGT 1966

Query:  2065 CTTTCATAAAGTTCTGCCATG-TTCTATTTCTTTCCTTAATCTTTTTTTCTTCCCTACTG 2123
             CTTT  TA A TTCT C  T  TT T TTT       TA T  T   T C    CTA  G
Sbjct:  1967 CTTTGTTACA-TTCTCCTCTCCTTGT-TTTGGAAGGATATTGCTGCCTACAGAGCTAAAG 2024

Query:  2124 TTTTATCCTCCCTTTGCTTT---GGAAG-GAT-ATTGCTGCATATCGAGCTA-AAGGA-A 2176
                 A CCT      GC      GG  G G T A  GCTG A A  GAGC A AA  A A
Sbjct:  2025 GAAAA-CCTGATGCAGCGAAAAAGGGGGTGGTCAAGGCTGAAAA--GAGCAAGAAAAAGA 2081

Query:  2177 AGCCTGATGCAGCAAAAAAGGGAGTTGTCAAGGCTGAAAAA-AGCAAGAAAAAGAAGGAA 2235
             AG   GA G AG   A  AGG  G TG   AGG TGA  AA AG A GAA AAGA GGAA
Sbjct:  2082 AGGAAGAGGAAGATGAGGAGGAGGATGAAGAGGATGAGGAAGAGGAGGAAGAAGA-GGAA 2140

Query:  2236 GAGGAGGAAGATGAGGAAGATGAAGAGGATGA 2267
             GA GA GA GA GA GAAGATGA GA GATGA
Sbjct:  2141 GACGAAGATGAAGAAGAAGATGATGATGATGA 2172

 Score = 193 (29.0 bits), Expect = 1.8e-198, Sum P(5) = 1.8e-198
 Identities = 101/154 (65%), Positives = 101/154 (65%), Strand = Plus / Plus

Query:   581 GTTTCTTAGCTAATACTTGTTCATATTGGTTATATTTAAATAGT-A-TAAAATTCCTGTT 638
             GTTTCTTAGCT A A T G T    T G T  TATTT A   GT A T  AA T   G T
Sbjct:   700 GTTTCTTAGCTGAGAATGGCTTGGGTCG-TG-TATTTGAGGGGTCAATGTAACTTAAGAT 757

Query:   639 GGGTGGGAGTGTTCCCAGAG-CATTTGAATT-AGACATTTGGTCTCCTTTGCCCAGTGTA 696
              GGTGG A T TT     AG CATTTGAA T AGA A T    CTCCTTTGC CAGTGTA
Sbjct:   758 AGGTGGTATTATTAGTGAAGGCATTTGAACTGAGAAACTCA--CTCCTTTGCACAGTGTA 815

Query:   697 TCTC--C---TTTTGAT-CTTTTTATTTCTTGAAAAAT 728
             TC C  C   TTTTG T CTTTTT T TCTT A AAAT
Sbjct:   816 TCACTACGATTTTTGGTTCTTTTTGTATCTTTAGAAAT 853


>X12597 Human mRNA for high mobility group-1 protein (HMG-1).
        Length = 1009

  Plus Strand HSPs:

 Score = 2131 (319.7 bits), Expect = 7.7e-193, Sum P(4) = 7.7e-193
 Identities = 429/431 (99%), Positives = 429/431 (99%), Strand = Plus / Plus

Query:  2146 AAGGATATTGCTGCATATCGAGCTAAAGGAAAGCCTGATGCAGCAAAAAAGGGAGTTGTC 2205
             AAGGATAT GCTGCATATCGAGCTAAAGGAAAGCCTGATGCAGCAAAAAAGGGAGTTGTC
Sbjct:   521 AAGGATATAGCTGCATATCGAGCTAAAGGAAAGCCTGATGCAGCAAAAAAGGGAGTTGTC 580

Query:  2206 AAGGCTGAAAAAAGCAAGAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGAT 2265
             AAGGCTGAAAAAAGCAAGAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGAT
Sbjct:   581 AAGGCTGAAAAAAGCAAGAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGAT 640

Query:  2266 GAGGAGGAGGAGGAAGATGAAGAAGATGAAGATGAAGAAGAAGATGATGATGATGAATAA 2325
             GAGGAGGAGGAGGAAGATGAAGAAGATGAAGATGAAGAAGAAGATGATGATGATGAATAA
Sbjct:   641 GAGGAGGAGGAGGAAGATGAAGAAGATGAAGATGAAGAAGAAGATGATGATGATGAATAA 700

Query:  2326 GTTGGTTCTAGCGCAGTTTTTTTTTTCTTGTCTATAAAGCATTTAACCCCCCTGTACACA 2385
             GTTGGTTCTAGCGCAGTTTTTTTTTTCTTGTCTATAAAGCATTTAACCCCCCTGTACACA
Sbjct:   701 GTTGGTTCTAGCGCAGTTTTTTTTTTCTTGTCTATAAAGCATTTAACCCCCCTGTACACA 760

Query:  2386 ACTCACTCC-TTTTAAAGAAAAAAATTGAAATGTAAGGCTGTGTAAGATTTGTTTTTAAA 2444
             ACTCACTCC TTTTAAAGAAAAAAATTGAAATGTAAGGCTGTGTAAGATTTGTTTTTAAA
Sbjct:   761 ACTCACTCCCTTTTAAAGAAAAAAATTGAAATGTAAGGCTGTGTAAGATTTGTTTTTAAA 820

Query:  2445 CTGTACAGTGTCTTTTTTTGTATAGTTAACACACTACCGAATGTGTCTTTAGATAGCCCT 2504
             CTGTACAGTGTCTTTTTTTGTATAGTTAACACACTACCGAATGTGTCTTTAGATAGCCCT
Sbjct:   821 CTGTACAGTGTCTTTTTTTGTATAGTTAACACACTACCGAATGTGTCTTTAGATAGCCCT 880

Query:  2505 GTCCTGGTGGTATTTTCAATAGCCACTAACCTTGCCTGGTACAGTATGGGGGTTGTAAAT 2564
             GTCCTGGTGGTATTTTCAATAGCCACTAACCTTGCCTGGTACAGTATGGGGGTTGTAAAT
Sbjct:   881 GTCCTGGTGGTATTTTCAATAGCCACTAACCTTGCCTGGTACAGTATGGGGGTTGTAAAT 940

Query:  2565 TGGCATGGAAA 2575
             TGGCATGGAAA
Sbjct:   941 TGGCATGGAAA 951

 Score = 880 (132.0 bits), Expect = 7.7e-193, Sum P(4) = 7.7e-193
 Identities = 176/176 (100%), Positives = 176/176 (100%), Strand = Plus / Plus

Query:   970 TTCGGCCTTCTTCCTCTTCTGCTCTGAGTATCGCCCAAAAATCAAAGGAGAACATCCTGG 1029
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:   349 TTCGGCCTTCTTCCTCTTCTGCTCTGAGTATCGCCCAAAAATCAAAGGAGAACATCCTGG 408

Query:  1030 CCTGTCCATTGGTGATGTTGCGAAGAAACTGGGAGAGATGTGGAATAACACTGCTGCAGA 1089
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:   409 CCTGTCCATTGGTGATGTTGCGAAGAAACTGGGAGAGATGTGGAATAACACTGCTGCAGA 468

Query:  1090 TGACAAGCAGCCTTATGAAAAGAAGGCTGCGAAGCTGAAGGAAAAATACGAAAAGG 1145
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:   469 TGACAAGCAGCCTTATGAAAAGAAGGCTGCGAAGCTGAAGGAAAAATACGAAAAGG 524

 Score = 754 (113.1 bits), Expect = 7.7e-193, Sum P(4) = 7.7e-193
 Identities = 162/172 (94%), Positives = 162/172 (94%), Strand = Plus / Plus

Query:   324 TTGTAGACCATGTCTGCTAAAGAGAAAGGAAAATTTGAAGATATGGCAAAAGCGGACAAG 383
             T G AGACCATGTCTGCTAAAGAGAAAGGAAAATTTGAAGATATGGCAAAAGCGGACAAG
Sbjct:   197 TGGAAGACCATGTCTGCTAAAGAGAAAGGAAAATTTGAAGATATGGCAAAAGCGGACAAG 256

Query:   384 GCCCGTTATGAAAGAGAAATGAAAACCTATATCCCTCCCAAAGGGGAGACAAAAAAGAAG 443
             GCCCGTTATGAAAGAGAAATGAAAACCTATATCCCTCCCAAAGGGGAGACAAAAAAGAAG
Sbjct:   257 GCCCGTTATGAAAGAGAAATGAAAACCTATATCCCTCCCAAAGGGGAGACAAAAAAGAAG 316

Query:   444 TTCAAGGATCCCAATGCACCCAAGAGGCCTCCGTGAGTAT-CTTGCCTGTTTT 495
             TTCAAGGATCCCAATGCACCCAAGAGGCCTCC T  G  T CTT CCT TT T
Sbjct:   317 TTCAAGGATCCCAATGCACCCAAGAGGCCTCCTTCGGCCTTCTT-CCTCTTCT 368

 Score = 750 (112.5 bits), Expect = 7.7e-193, Sum P(4) = 7.7e-193
 Identities = 150/150 (100%), Positives = 150/150 (100%), Strand = Plus / Plus

Query:     1 ATGGGCAAAGGAGATCCTAAGAAGCCGAGAGGCAAAATGTCATCATATGCATTTTTTGTG 60
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:    53 ATGGGCAAAGGAGATCCTAAGAAGCCGAGAGGCAAAATGTCATCATATGCATTTTTTGTG 112

Query:    61 CAAACTTGTCGGGAGGAGCATAAGAAGAAGCACCCAGATGCTTCAGTCAACTTCTCAGAG 120
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:   113 CAAACTTGTCGGGAGGAGCATAAGAAGAAGCACCCAGATGCTTCAGTCAACTTCTCAGAG 172

Query:   121 TTTTCTAAGAAGTGCTCAGAGAGGTGGAAG 150
             ||||||||||||||||||||||||||||||
Sbjct:   173 TTTTCTAAGAAGTGCTCAGAGAGGTGGAAG 202


>D63874 Human mRNA for HMG-1, complete cds.
        Length = 1194

  Plus Strand HSPs:

 Score = 2123 (318.5 bits), Expect = 6.2e-191, Sum P(4) = 6.2e-191
 Identities = 427/430 (99%), Positives = 427/430 (99%), Strand = Plus / Plus

Query:  2146 AAGGATATTGCTGCATATCGAGCTAAAGGAAAGCCTGATGCAGCAAAAAAGGGAGTTGTC 2205
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:   545 AAGGATATTGCTGCATATCGAGCTAAAGGAAAGCCTGATGCAGCAAAAAAGGGAGTTGTC 604

Query:  2206 AAGGCTGAAAAAAGCAAGAAAAAGAAGGAAGAGGAGGAAGATGAGGAAGATGAAGAGGAT 2265
             |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct:   605 AAGGCTGAAAAAAGCAAGAAAAAGAAGGAAGAGGAGGAAGGTGAGGAAGATGAAGAGGAT 664

Query:  2266 GAGGAGGAGGAGGAAGATGAAGAAGATGAAGATGAAGAAGAAGATGATGATGATGAATAA 2325
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:   665 GAGGAGGAGGAGGAAGATGAAGAAGATGAAGATGAAGAAGAAGATGATGATGATGAATAA 724

Query:  2326 GTTGGTTCTAGCGCAGTTTTTTTTTTCTTGTCTATAAAGCATTTAACCCCCCTGTACACA 2385
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:   725 GTTGGTTCTAGCGCAGTTTTTTTTTTCTTGTCTATAAAGCATTTAACCCCCCTGTACACA 784

Query:  2386 ACTCACTCCTTTTAAAGAAAAAAATTGAAATGTAAGGCTGTGTAAGATTTGTTTTTAAAC 2445
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:   785 ACTCACTCCTTTTAAAGAAAAAAATTGAAATGTAAGGCTGTGTAAGATTTGTTTTTAAAC 844

Query:  2446 TGTACAGTGTCTTTTTTTGTATAGTTAACACACTACCGAATGTGTCTTTAGATAGCCCTG 2505
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:   845 TGTACAGTGTCTTTTTTTGTATAGTTAACACACTACCGAATGTGTCTTTAGATAGCCCTG 904

Query:  2506 TCCTGGTGGTATTTTCAATAGCCACTAACCTTGCCTGGTACAGTATGGGGGTTGTAAATT 2565
             |||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct:   905 TCCTGGTGGTATCTTCAATAGCCACTAACCCTGCCTGGTACAGTATGGGGGTTGTAAATT 964

Query:  2566 GGCATGGAAA 2575
             ||||||||||
Sbjct:   965 GGCATGGAAA 974

 Score = 862 (129.3 bits), Expect = 6.2e-191, Sum P(4) = 6.2e-191
 Identities = 174/176 (98%), Positives = 174/176 (98%), Strand = Plus / Plus

Query:   970 TTCGGCCTTCTTCCTCTTCTGCTCTGAGTATCGCCCAAAAATCAAAGGAGAACATCCTGG 1029
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:   373 TTCGGCCTTCTTCCTCTTCTGCTCTGAGTATCGCCCAAAAATCAAAGGAGAACATCCTGG 432

Query:  1030 CCTGTCCATTGGTGATGTTGCGAAGAAACTGGGAGAGATGTGGAATAACACTGCTGCAGA 1089
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:   433 CCTGTCCATTGGTGATGTTGCGAAGAAACTGGGAGAGATGTGGAATAACACTGCTGCAGA 492

Query:  1090 TGACAAGCAGCCTTATGAAAAGAAGGCTGCGAAGCTGAAGGAAAAATACGAAAAGG 1145
             |||||||||||||||||||||||||||||  |||||||||||||||||||||||||
Sbjct:   493 TGACAAGCAGCCTTATGAAAAGAAGGCTGAAAAGCTGAAGGAAAAATACGAAAAGG 548

 Score = 754 (113.1 bits), Expect = 6.2e-191, Sum P(4) = 6.2e-191
 Identities = 162/172 (94%), Positives = 162/172 (94%), Strand = Plus / Plus

Query:   324 TTGTAGACCATGTCTGCTAAAGAGAAAGGAAAATTTGAAGATATGGCAAAAGCGGACAAG 383
             T G AGACCATGTCTGCTAAAGAGAAAGGAAAATTTGAAGATATGGCAAAAGCGGACAAG
Sbjct:   221 TGGAAGACCATGTCTGCTAAAGAGAAAGGAAAATTTGAAGATATGGCAAAAGCGGACAAG 280

Query:   384 GCCCGTTATGAAAGAGAAATGAAAACCTATATCCCTCCCAAAGGGGAGACAAAAAAGAAG 443
             GCCCGTTATGAAAGAGAAATGAAAACCTATATCCCTCCCAAAGGGGAGACAAAAAAGAAG
Sbjct:   281 GCCCGTTATGAAAGAGAAATGAAAACCTATATCCCTCCCAAAGGGGAGACAAAAAAGAAG 340

Query:   444 TTCAAGGATCCCAATGCACCCAAGAGGCCTCCGTGAGTAT-CTTGCCTGTTTT 495
             TTCAAGGATCCCAATGCACCCAAGAGGCCTCC T  G  T CTT CCT TT T
Sbjct:   341 TTCAAGGATCCCAATGCACCCAAGAGGCCTCCTTCGGCCTTCTT-CCTCTTCT 392

 Score = 732 (109.8 bits), Expect = 6.2e-191, Sum P(4) = 6.2e-191
 Identities = 148/150 (98%), Positives = 148/150 (98%), Strand = Plus / Plus

Query:     1 ATGGGCAAAGGAGATCCTAAGAAGCCGAGAGGCAAAATGTCATCATATGCATTTTTTGTG 60
             |||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||
Sbjct:    77 ATGGGCAAAGGAGATCCTAAGAAGCCGAGACGGAAAATGTCATCATATGCATTTTTTGTG 136

Query:    61 CAAACTTGTCGGGAGGAGCATAAGAAGAAGCACCCAGATGCTTCAGTCAACTTCTCAGAG 120
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct:   137 CAAACTTGTCGGGAGGAGCATAAGAAGAAGCACCCAGATGCTTCAGTCAACTTCTCAGAG 196

Query:   121 TTTTCTAAGAAGTGCTCAGAGAGGTGGAAG 150
             ||||||||||||||||||||||||||||||
Sbjct:   197 TTTTCTAAGAAGTGCTCAGAGAGGTGGAAG 226


Parameters:

  ctxfactor=2.00
  E=10

  Query                        -----  As Used  -----    -----  Computed  ----
  Strand MatID Matrix name     Lambda    K       H      Lambda    K       H
   +1      0   +5,-4           0.192   0.173   0.357    same    same    same
               Q=10,R=10       0.104   0.0151  0.0600    n/a     n/a     n/a
   -1      0   +5,-4           0.192   0.173   0.357    same    same    same
               Q=10,R=10       0.104   0.0151  0.0600    n/a     n/a     n/a

  Query
  Strand MatID  Length  Eff.Length     E     S  W   T   X   E2      S2
   +1      0     2575      2575       10.  214 11 n/a  73  0.024    82
                                                      102  0.023   124
   -1      0     2575      2575       10.  214 11 n/a  73  0.024    82
                                                      102  0.023   124


Statistics:

  Database:  /dbEST1/wublast/database/embl/embl.fas
    Title:  embl
    Release date:  unknown
    Posted date:  12:04 PM GMT Feb 21, 2000
    Format:  BLAST
  # of letters in database:  675,252,082
  # of sequences in database:  442,729
  # of database sequences satisfying E:  1440
  No. of states in DFA:  255 (255 KB)
  Total size of DFA:  313 KB (320 KB)
  Time to generate neighborhood:  0.02u 0.00s 0.02t  Elapsed: 00:00:00
  No. of threads or processors used:  2
  Search cpu time:  83.90u 2.19s 86.09t  Elapsed: 00:01:01
  Total cpu time:  85.13u 2.36s 87.49t  Elapsed: 00:01:04
  Start:  Mon Feb 21 12:11:11 2000   End:  Mon Feb 21 12:12:15 2000

WARNINGS ISSUED:  2
