org.biojava.bio.gui.sequence Class Hierarchy (BioJava-1.5-beta API)

Overview | Package | Class | Use | Tree | Deprecated | Index | Help
PREV NEXT | FRAMES NO FRAMES

## Hierarchy For Package org.biojava.bio.gui.sequence

Package Hierarchies:
  All Packages

## Class Hierarchy

- java.lang.Object
  - org.biojava.utils.AbstractChangeable (implements org.biojava.utils.Changeable)
    - org.biojava.bio.gui.sequence.AbiTraceRenderer (implements org.biojava.bio.gui.sequence.SequenceRenderer)
    - org.biojava.bio.gui.sequence.AbstractBeadRenderer (implements org.biojava.bio.gui.sequence.BeadFeatureRenderer, java.io.Serializable)
      - org.biojava.bio.gui.sequence.EllipticalBeadRenderer
      - org.biojava.bio.gui.sequence.RectangularBeadRenderer
      - org.biojava.bio.gui.sequence.RoundRectangularBeadRenderer
    - org.biojava.bio.gui.sequence.BasicFeatureRenderer (implements org.biojava.bio.gui.sequence.FeatureRenderer)
    - org.biojava.bio.gui.sequence.CrosshairRenderer (implements org.biojava.bio.gui.sequence.PairwiseSequenceRenderer)
    - org.biojava.bio.gui.sequence.FeatureBlockSequenceRenderer (implements org.biojava.bio.gui.sequence.SequenceRenderer)
    - org.biojava.bio.gui.sequence.FeatureLabelRenderer (implements org.biojava.bio.gui.sequence.FeatureRenderer)
    - org.biojava.bio.gui.sequence.LabelledSequenceRenderer (implements org.biojava.bio.gui.sequence.SequenceRenderer)
    - org.biojava.bio.gui.sequence.MultiLineRenderer (implements org.biojava.bio.gui.sequence.SequenceRenderer, java.io.Serializable)
      - org.biojava.bio.gui.sequence.AbstractPeptideDigestRenderer
        - org.biojava.bio.gui.sequence.PeptideDigestRenderer
    - org.biojava.bio.gui.sequence.OffsetRulerRenderer (implements org.biojava.bio.gui.sequence.SequenceRenderer)
    - org.biojava.bio.gui.sequence.OverlayRendererWrapper (implements org.biojava.bio.gui.sequence.OverlayMarker, org.biojava.bio.gui.sequence.SequenceRenderer, java.io.Serializable)
    - org.biojava.bio.gui.sequence.PairwiseDiagonalRenderer (implements org.biojava.bio.gui.sequence.PairwiseSequenceRenderer, java.io.Serializable)
    - org.biojava.bio.gui.sequence.PairwiseFilteringRenderer (implements org.biojava.bio.gui.sequence.PairwiseSequenceRenderer, java.io.Serializable)
    - org.biojava.bio.gui.sequence.PairwiseOverlayRenderer (implements org.biojava.bio.gui.sequence.PairwiseSequenceRenderer, java.io.Serializable)
    - org.biojava.bio.gui.sequence.SequenceRendererWrapper (implements org.biojava.bio.gui.sequence.SequenceRenderer, java.io.Serializable)
      - org.biojava.bio.gui.sequence.AlignmentRenderer
      - org.biojava.bio.gui.sequence.BumpedRenderer
      - org.biojava.bio.gui.sequence.FilteringRenderer
        - org.biojava.bio.gui.sequence.GlyphFeatureRenderer (implements org.biojava.bio.gui.sequence.FeatureRenderer)
          - org.biojava.bio.gui.sequence.SecondaryStructureFeatureRenderer
      - org.biojava.bio.gui.sequence.GappedRenderer
      - org.biojava.bio.gui.sequence.PaddingRenderer
    - org.biojava.bio.gui.sequence.SimpleLabelRenderer (implements org.biojava.bio.gui.sequence.LabelRenderer)
    - org.biojava.bio.gui.sequence.SixFrameRenderer (implements org.biojava.bio.gui.sequence.SequenceRenderer)
    - org.biojava.bio.gui.sequence.SixFrameZiggyRenderer (implements org.biojava.bio.gui.sequence.FeatureRenderer, java.io.Serializable)
    - org.biojava.bio.gui.sequence.StackedFeatureRenderer (implements org.biojava.bio.gui.sequence.FeatureRenderer)
    - org.biojava.bio.gui.sequence.TickFeatureRenderer (implements org.biojava.bio.gui.sequence.FeatureRenderer)
    - org.biojava.bio.gui.sequence.ZiggyFeatureRenderer (implements org.biojava.bio.gui.sequence.FeatureRenderer, java.io.Serializable)
  - org.biojava.bio.gui.sequence.ArrowedFeatureRenderer (implements org.biojava.bio.gui.sequence.FeatureRenderer)
  - org.biojava.bio.gui.sequence.BasicImapRenderer (implements org.biojava.bio.gui.sequence.ImageMapRenderer, java.io.Serializable)
  - org.biojava.utils.ChangeForwarder (implements org.biojava.utils.ChangeListener)
    - org.biojava.bio.gui.sequence.PairwiseSequenceRenderer.PairwiseRendererForwarder
    - org.biojava.bio.gui.sequence.SequenceRenderer.RendererForwarder
  - org.biojava.bio.gui.sequence.CircularFeatureFilteringRenderer (implements org.biojava.bio.gui.sequence.CircularRenderer)
  - org.biojava.bio.gui.sequence.CircularFeaturesRenderer (implements org.biojava.bio.gui.sequence.CircularRenderer)
  - org.biojava.bio.gui.sequence.CircularMLR (implements org.biojava.bio.gui.sequence.CircularRenderer)
  - org.biojava.bio.gui.sequence.CircularPaddedRenderer (implements org.biojava.bio.gui.sequence.CircularRenderer)
  - java.awt.Component (implements java.awt.image.ImageObserver, java.awt.MenuContainer, java.io.Serializable)
    - java.awt.Container
      - javax.swing.JComponent (implements java.io.Serializable)
        - org.biojava.bio.gui.sequence.CircularRendererPanel
        - javax.swing.JPanel (implements javax.accessibility.Accessible)
          - org.biojava.bio.gui.sequence.SequencePanelWrapper
        - org.biojava.bio.gui.sequence.PairwiseSequencePanel (implements org.biojava.utils.Changeable, org.biojava.bio.gui.sequence.PairwiseRenderContext, java.io.Serializable)
        - org.biojava.bio.gui.sequence.SequencePanel (implements org.biojava.utils.Changeable, org.biojava.bio.gui.sequence.SequenceRenderContext, javax.swing.SwingConstants)
        - org.biojava.bio.gui.sequence.SequencePoster (implements org.biojava.utils.Changeable, org.biojava.bio.gui.sequence.SequenceRenderContext, javax.swing.SwingConstants)
        - org.biojava.bio.gui.sequence.TranslatedSequencePanel (implements org.biojava.utils.Changeable, org.biojava.bio.gui.sequence.SequenceRenderContext)
  - java.util.EventObject (implements java.io.Serializable)
    - org.biojava.bio.gui.sequence.SequenceViewerEvent
  - org.biojava.bio.gui.sequence.FeatureLabelRenderer.AnnotationLabelMaker (implements org.biojava.bio.gui.sequence.FeatureLabelRenderer.LabelMaker)
  - org.biojava.bio.gui.sequence.FeatureLabelRenderer.SourceLabelMaker (implements org.biojava.bio.gui.sequence.FeatureLabelRenderer.LabelMaker)
  - org.biojava.bio.gui.sequence.FeatureLabelRenderer.TypeLabelMaker (implements org.biojava.bio.gui.sequence.FeatureLabelRenderer.LabelMaker)
  - org.biojava.bio.gui.sequence.GUITools
  - org.biojava.bio.gui.sequence.HeadlessRenderContext (implements org.biojava.bio.gui.sequence.SequenceRenderContext)
  - org.biojava.bio.gui.sequence.ImageMap.ClientSide (implements org.biojava.bio.gui.sequence.ImageMap, java.io.Serializable)
  - org.biojava.bio.gui.sequence.ImageMap.HotSpot (implements java.io.Serializable)
  - org.biojava.bio.gui.sequence.ImageMap.ServerSide (implements org.biojava.bio.gui.sequence.ImageMap, java.io.Serializable)
  - org.biojava.bio.gui.sequence.LabelRenderer.RenderNothing (implements org.biojava.bio.gui.sequence.LabelRenderer)
  - org.biojava.bio.gui.sequence.LayeredRenderer
  - org.biojava.bio.gui.sequence.LineInfo
  - org.biojava.bio.gui.sequence.RectangularImapRenderer (implements org.biojava.bio.gui.sequence.BeadFeatureRenderer, org.biojava.bio.gui.sequence.ImageMapRenderer, java.io.Serializable)
  - org.biojava.bio.gui.sequence.RulerRenderer (implements org.biojava.bio.gui.sequence.SequenceRenderer)
  - org.biojava.bio.gui.sequence.SequencePanel.Border (implements java.io.Serializable, javax.swing.SwingConstants)
  - org.biojava.bio.gui.sequence.SequencePoster.Border (implements java.io.Serializable, javax.swing.SwingConstants)
  - org.biojava.bio.gui.sequence.SequenceRenderContext.Border (implements java.io.Serializable, javax.swing.SwingConstants)
  - org.biojava.bio.gui.sequence.SequenceViewerMotionSupport
  - org.biojava.bio.gui.sequence.SequenceViewerSupport
  - org.biojava.bio.gui.sequence.StopRenderer (implements org.biojava.bio.gui.sequence.SequenceRenderer)
  - org.biojava.bio.gui.sequence.SubCircularRendererContext (implements org.biojava.bio.gui.sequence.CircularRendererContext)
  - org.biojava.bio.gui.sequence.SubPairwiseRenderContext (implements org.biojava.bio.gui.sequence.PairwiseRenderContext)
  - org.biojava.bio.gui.sequence.SubSequenceRenderContext (implements org.biojava.bio.gui.sequence.SequenceRenderContext)
  - org.biojava.bio.gui.sequence.SymbolSequenceRenderer (implements org.biojava.bio.gui.sequence.SequenceRenderer)
  - org.biojava.bio.gui.sequence.ZiggyImapRenderer (implements org.biojava.bio.gui.sequence.ImageMapRenderer, java.io.Serializable)

## Interface Hierarchy

- org.biojava.bio.gui.sequence.CircularFeatureRenderer
- org.biojava.bio.gui.sequence.CircularRenderer
- org.biojava.bio.gui.sequence.CircularRendererContext
- java.util.EventListener
  - org.biojava.bio.gui.sequence.SequenceViewerListener
  - org.biojava.bio.gui.sequence.SequenceViewerMotionListener
- org.biojava.bio.gui.sequence.FeatureLabelRenderer.LabelMaker
- org.biojava.bio.gui.sequence.FeatureRenderer
  - org.biojava.bio.gui.sequence.BeadFeatureRenderer
  - org.biojava.bio.gui.sequence.ImageMapRenderer
- org.biojava.bio.gui.sequence.FeatureSource
- org.biojava.bio.gui.sequence.ImageMap
- org.biojava.bio.gui.sequence.LabelRenderer
- org.biojava.bio.gui.sequence.OverlayMarker
- org.biojava.bio.gui.sequence.PairwiseSequenceRenderer
- org.biojava.bio.gui.sequence.SequenceRenderer
- javax.swing.SwingConstants
  - org.biojava.bio.gui.sequence.SequenceRenderContext
    - org.biojava.bio.gui.sequence.PairwiseRenderContext

Overview | Package | Class | Use | Tree | Deprecated | Index | Help
PREV NEXT | FRAMES NO FRAMES