Uses of Interface org.biojava.bio.program.gff.GFFRecord (BioJava-1.5-beta API)

Overview | Package | Class | Use | Tree | Deprecated | Index | Help
PREV NEXT | FRAMES NO FRAMES

## Uses of Interface
org.biojava.bio.program.gff.GFFRecord

Packages that use GFFRecord
org.biojava.bio.program.gff | GFF manipulation.

Uses of GFFRecord in org.biojava.bio.program.gff

Classes in org.biojava.bio.program.gff that implement GFFRecord
`class` | `SimpleGFFRecord` A no-frills implementation of a GFFRecord.

Methods in org.biojava.bio.program.gff that return GFFRecord
`protected GFFRecord` | `GFFParser.createRecord(GFFDocumentHandler handler, List aList, String rest, String comment)` Actually turns a list of tokens, some value string and a comment into a GFFRecord and informs handler.

Methods in org.biojava.bio.program.gff with parameters of type GFFRecord
`boolean` | `GFFRecordFilter.accept(GFFRecord record)` Return whether or not to accept record.
`boolean` | `GFFRecordFilter.AcceptAll.accept(GFFRecord record)`
`boolean` | `GFFRecordFilter.SequenceFilter.accept(GFFRecord record)`
`boolean` | `GFFRecordFilter.StrandFilter.accept(GFFRecord record)`
`boolean` | `GFFRecordFilter.SourceFilter.accept(GFFRecord record)`
`boolean` | `GFFRecordFilter.FeatureFilter.accept(GFFRecord record)`
`boolean` | `GFFRecordFilter.FrameFilter.accept(GFFRecord record)`
`boolean` | `GFFRecordFilter.NotFilter.accept(GFFRecord record)`
`void` | `GFFEntrySet.add(GFFRecord record)` Add a GFFRecord to the end of this set.
`void` | `GFFDocumentHandler.recordLine(GFFRecord record)` A record line has been encountered.
`void` | `GFFWriter.recordLine(GFFRecord record)` Prints record to the PrintWriter.
`void` | `GFFFilterer.recordLine(GFFRecord record)` Only forward the GFFRecords that match a filter.

Constructors in org.biojava.bio.program.gff with parameters of type GFFRecord
`SimpleGFFRecord(GFFRecord rec)` Create a new SimpleGFFRecord from GFFRecord object

Overview | Package | Class | Use | Tree | Deprecated | Index | Help
PREV NEXT | FRAMES NO FRAMES