Uses of Interface org.biojavax.bio.db.BioEntryDB (BioJava-1.5-beta API)

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## Uses of Interface
org.biojavax.bio.db.BioEntryDB

Packages that use BioEntryDB
org.biojavax.bio.db | Interactions between biojavax objects and a DB.
org.biojavax.bio.db.biosql |
org.biojavax.bio.db.ncbi |

Uses of BioEntryDB in org.biojavax.bio.db

Subinterfaces of BioEntryDB in org.biojavax.bio.db
`interface` | `RichSequenceDB` A database of RichSequences with accessible keys and iterators over all sequences.

Classes in org.biojavax.bio.db that implement BioEntryDB
`class` | `AbstractBioEntryDB` An abstract implementation of BioEntryDB that provides the getBioEntryIterator method.
`class` | `AbstractRichSequenceDB` An abstract implementation of RichSequenceDB that provides the getRichSequenceIterator method.
`class` | `HashBioEntryDB` An implementation of RichSequenceDB that uses an underlying HashMap to store the RichSequence objects.
`class` | `HashRichSequenceDB` An implementation of RichSequenceDB that uses an underlying HashMap to store the RichSequence objects.

Methods in org.biojavax.bio.db that return BioEntryDB
`BioEntryDB` | `AbstractRichSequenceDB.getBioEntrys(Set ids)`
`BioEntryDB` | `BioEntryDBLite.getBioEntrys(Set ids)` Retrieve multiple BioEntry by their ids.
`BioEntryDB` | `HashBioEntryDB.getBioEntrys(Set ids)`
`BioEntryDB` | `AbstractRichSequenceDB.getBioEntrys(Set ids, BioEntryDB db)`
`BioEntryDB` | `BioEntryDBLite.getBioEntrys(Set ids, BioEntryDB db)` Retrieve multiple BioEntry into a specific sequence database.
`BioEntryDB` | `HashBioEntryDB.getBioEntrys(Set ids, BioEntryDB db)`

Methods in org.biojavax.bio.db with parameters of type BioEntryDB
`BioEntryDB` | `AbstractRichSequenceDB.getBioEntrys(Set ids, BioEntryDB db)`
`BioEntryDB` | `BioEntryDBLite.getBioEntrys(Set ids, BioEntryDB db)` Retrieve multiple BioEntry into a specific sequence database.
`BioEntryDB` | `HashBioEntryDB.getBioEntrys(Set ids, BioEntryDB db)`

Uses of BioEntryDB in org.biojavax.bio.db.biosql

Classes in org.biojavax.bio.db.biosql that implement BioEntryDB
`class` | `BioSQLBioEntryDB`
`class` | `BioSQLRichSequenceDB`

Methods in org.biojavax.bio.db.biosql that return BioEntryDB
`BioEntryDB` | `BioSQLBioEntryDB.getBioEntrys(Set ids)`
`BioEntryDB` | `BioSQLBioEntryDB.getBioEntrys(Set ids, BioEntryDB db)`

Methods in org.biojavax.bio.db.biosql with parameters of type BioEntryDB
`BioEntryDB` | `BioSQLBioEntryDB.getBioEntrys(Set ids, BioEntryDB db)`

Uses of BioEntryDB in org.biojavax.bio.db.ncbi

Classes in org.biojavax.bio.db.ncbi that implement BioEntryDB
`class` | `GenbankRichSequenceDB` This class contains functions accessing DNA sequences in Genbank format.

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