Uses of Interface org.biojava.bio.dist.OrderNDistribution (BioJava-1.5-beta API)

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## Uses of Interface
org.biojava.bio.dist.OrderNDistribution

Packages that use OrderNDistribution
org.biojava.bio.dist | Probability distributions over Alphabets.
org.biojavax.ga.functions | GA functions
org.biojavax.ga.util | Utility functions and helper classes

Uses of OrderNDistribution in org.biojava.bio.dist

Classes in org.biojava.bio.dist that implement OrderNDistribution
`class` | `AbstractOrderNDistribution` Simple base class for OrderNDistributions.

Methods in org.biojava.bio.dist with parameters of type OrderNDistribution
`protected static Sequence` | `DistributionTools.generateOrderNSequence(String name, OrderNDistribution d, int length)` Deprecated. use generateSequence() or generateSymbolList() instead.

Uses of OrderNDistribution in org.biojavax.ga.functions

Methods in org.biojavax.ga.functions that return OrderNDistribution
`OrderNDistribution` | `MutationFunction.getMutationSpectrum()`
`OrderNDistribution` | `MutationFunction.NoMutation.getMutationSpectrum()`
`OrderNDistribution` | `AbstractMutationFunction.getMutationSpectrum()`

Methods in org.biojavax.ga.functions with parameters of type OrderNDistribution
`void` | `MutationFunction.setMutationSpectrum(OrderNDistribution mutationSpectrum)` Sets the `Distribution` of `Symbols` that will be selected from when a mutation occurs.
`void` | `MutationFunction.NoMutation.setMutationSpectrum(OrderNDistribution odn)`
`void` | `AbstractMutationFunction.setMutationSpectrum(OrderNDistribution mutationSpectrum)`

Uses of OrderNDistribution in org.biojavax.ga.util

Methods in org.biojavax.ga.util that return OrderNDistribution
`static OrderNDistribution` | `GATools.standardMutationDistribution(FiniteAlphabet a)` Makes a mutation `Distribution` where the probability of a `Symbol` being mutated to itself is zero and the probability of it being changed to any other `Symbol` in the `Alphabet a` is `1.0 / (a.size() - 1.0)`
`static OrderNDistribution` | `GATools.uniformMutationDistribution(FiniteAlphabet a)` Makes a 1st order distribution which is infact uniform (equivalent to a uniform zero order distribution).

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